Cp4.1LG01g00990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g00990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhytoene synthase
LocationCp4.1LG01 : 3271567 .. 3274741 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGATATGGGGTCTTAACTCTGTCCACGAATCCCCCCATGTGGGATCCTTGGGATTATTCAAGGGAAGAACTGCTTCTTGAAATCCCACCATAGACGACTTTAAATTCATTATGGATAAAAGATTGGTAGTCACCCATTTACCCTTTTTGCTCTCTCTCTCTCTCTCTTTGAGTCTCTCAGATAAAAGGCTTACAGAAAAGCTGCAAGAGGAGGAGGAGAAGAAAATTTGAGGGGGTTTTTGTGGGTGGCTGTGAAGAGAAGATGTCTGGTGTCAATGCTAACTCCCTGCTGAGCCCCATGCCAAGAATTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTCGAATGGGTGTAAGAGATTGAGTCTGTTTTCTTGTGGGGTTTTGGCATCCTCTGCTGCTGTAGCCAACCCTTCAAGATCCTCTGAAGAAAGGGTGTATGAAGTTGTTCTGAAACAAGCAGCTCTTGTGAGGGAGCTGCCCAAGAGGGATGGAGAAACAGCTTTGGATTGGGATAAAACCATACAAAATGAGGGTATTAGTGATGGGAATCTCTTGGATGAAGCATATTCTCGCTGTGGTGAGGTCTGTGCTGAGTATGCCAAAACATTTTATCTGGGTAAACTTTACCCTCTTTGCTCTACTGCTTCATTTTTGTCTTGCCATTTTTCACTGTTGGGATATGAATTGTTTGGCTGCCATAACAATGGATCTGATAGTGATAATGGTGGAATGATATCTGTCCCTTGGTTGATCCAGATTGTGATAAAAACAGGCATAGTTTTATTGTATCTCAACTCTTCATATTTATCAACTCTGTTTCTCAACCTGCAAATGATTGTTTGATTGAGCCTCTTTCTTGCTGTTCTCAGGGACACAGCTTATGACACCGGAGCGACGAAGAGCGGTGTGGGCGATTTACGGTATCAGTCATCCTCTTCCTCCAGCATCTTATCTTTTTGTCTACTGCAAACTTTGTCCATTTCTATAGAACAAGTTGGCTGTATTGCTCCATGTGGTGGTAGCCATGCTTTTCTGGTTGTTTTTGTTGATGATTCAGGTTTTTTTTCATAAGTTCTTGAACTTTAAAAAGTGTACATTGGTCGTTTGATAACTGTTTGATTTTTGGTTTTTCGAAATTGTGTTTGTTTTCTTACCATTGTCTACCATAGTTTCGTCGTTCTTAAGAAAACATTTAACTTCTTAGCTGAATTTTGTTGCCATAGCAGTTCAGAATTTTCATTTTGATGTTATCTTCAGTTTTGAACATTCAAGAGTGTAACTATTTGTAATGCAGTGTGGTGCAGAAGGACGGACGAGCTCGTGGATGGACCAAATGCTTCACACATCACACCTAAGGCTCTCGAGCGATGGGAGAAACGACTAACCGATCTGTTTGAGGGTCGAGCGTATGATATGTATGATGCTGCTCTTTCTGATACAGTCTCAAAATACCCCGTTGACATTCAGGTAAACTCACTCCTTCCTTTGTGATATGAGAACTCTGGGCTGTCATGGTTAACAAATAATCAGATCCCAATGATTTAAAACGAGCAACGATGATTTAACTACTCTCATCTTCGAGTAAAGATGGCTCACGTATGTATACGTTGTGTTTCGACAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACTTGCGAAAATCGAGATACGAGAACTTCGACGAGCTTTACCTTTACTGCTATTATGTTGCTGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTTGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACTAACATTCTAAGAGACGTTGGAGAAGAGTAAGCTTTCTTCCACAATCTTAGCAACTAAAGTTACTTTTAACATTTACAAACTACAATGCCACAAGGAAATGTTTTCGAACTTTTCGAAACTTAGCAATATGTTCTTGTTTGTTCGTATCTTTGAGGAGTTGTGTCACGTTTTGTTTCAACAGTGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCTGGGCTATGCGACGATGACATATTCCGAGGGAAAGTGACCGAAAAGTGGCGGAGTTTCATGAAAGGACAGATAAAAAGAGCAAGAATGTTCTTTGATGAGGCTGAGAAGGGCATTGGAGAGCTGAATGAAGCCAGTAGATGGCCAGTGTGGGCGTCCTTAATGCTTTATAAGCAAATATTAGATTCCATTGAAGCTAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAAAGCTGTGGTGGCCCCTCAAATTTCAAAGATGTGGTAACATCATAGTTTTTTTTTTCTTTTTTTTTCCTTGTGATTATTCAACACGTGTCACGATTCGCTCGTTGTAAATTTTAGATGTTAGATGACTTTGAAGCAAATTGACTTCACAAAGGAAAAGCTTAGAATTATTAATAATGGAACGAAAAGGTAATTCTTTAATTTCATTGATTTCGTTCCAATAGGATGGAATACGAACTTGACATTTTGGTCGAAGTTTAATGTTTTAATATTAACGTGAGCTAAAAAGTTGGTACTATTTTACAGCCCGAAAACAGAAAGGATATGTTAAGAAAATCAAGAATATTTGTACATTCAAACTCTACAGCACAGGTCTCACTTTATTTTCTCCTACCCTTCTGCTTTGCGCTCGGTTTTGGCGAGGAAGAGGATGAGTAGGACGATGAAACGCTTGATCGGTTGTTCTCCGCTAAGTCCTTGGATAATGCCTTTTGAACCTCATCTTTAAGTTCCATGAACCGAGCCTTCTTCTTCCGCTGCTCCTCTGGAGTTCCCTTTTCAAGGAACAGAAGGTCGGGCATGTCATCGGCTAAAAAGTTGTCGAGAACTTCCGAGCAATGAGGGAAAAAGCGTCGACCCGTATTCACTGTGATCAGGTGTGATGTTACATGAGTGATGAGCTCATCTTACACTCAATTGGATGAAAAGTAGAAAGTAATTAATAGATAGTGTTCTGAAAAGTACCTGTTTTCATTAGAGCTTTCATTCTTGATTGGAGTCTTTTGGTTCGCATGGATGGTGTTTCATTCGAGTCAAGCTTCAGCAAGTTGCCAGATGACC

mRNA sequence

TATGATATGGGGTCTTAACTCTGTCCACGAATCCCCCCATGTGGGATCCTTGGGATTATTCAAGGGAAGAACTGCTTCTTGAAATCCCACCATAGACGACTTTAAATTCATTATGGATAAAAGATTGGTAGTCACCCATTTACCCTTTTTGCTCTCTCTCTCTCTCTCTTTGAGTCTCTCAGATAAAAGGCTTACAGAAAAGCTGCAAGAGGAGGAGGAGAAGAAAATTTGAGGGGGTTTTTGTGGGTGGCTGTGAAGAGAAGATGTCTGGTGTCAATGCTAACTCCCTGCTGAGCCCCATGCCAAGAATTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTCGAATGGGTGTAAGAGATTGAGTCTGTTTTCTTGTGGGGTTTTGGCATCCTCTGCTGCTGTAGCCAACCCTTCAAGATCCTCTGAAGAAAGGGTGTATGAAGTTGTTCTGAAACAAGCAGCTCTTGTGAGGGAGCTGCCCAAGAGGGATGGAGAAACAGCTTTGGATTGGGATAAAACCATACAAAATGAGGGTATTAGTGATGGGAATCTCTTGGATGAAGCATATTCTCGCTGTGGTGAGGTCTGTGCTGAGTATGCCAAAACATTTTATCTGGGGACACAGCTTATGACACCGGAGCGACGAAGAGCGGTGTGGGCGATTTACGTGTGGTGCAGAAGGACGGACGAGCTCGTGGATGGACCAAATGCTTCACACATCACACCTAAGGCTCTCGAGCGATGGGAGAAACGACTAACCGATCTGTTTGAGGGTCGAGCGTATGATATGTATGATGCTGCTCTTTCTGATACAGTCTCAAAATACCCCGTTGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACTTGCGAAAATCGAGATACGAGAACTTCGACGAGCTTTACCTTTACTGCTATTATGTTGCTGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTTGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACTAACATTCTAAGAGACGTTGGAGAAGATGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCTGGGCTATGCGACGATGACATATTCCGAGGGAAAGTGACCGAAAAGTGGCGGAGTTTCATGAAAGGACAGATAAAAAGAGCAAGAATGTTCTTTGATGAGGCTGAGAAGGGCATTGGAGAGCTGAATGAAGCCAGTAGATGGCCAGTGTGGGCGTCCTTAATGCTTTATAAGCAAATATTAGATTCCATTGAAGCTAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAAAGCTGTGGTGGCCCCTCAAATTTCAAAGATGTGGTAACATCATAGTTTTTTTTTTCTTTTTTTTTCCTTGTGATTATTCAACACGTGTCACGATTCGCTCGTTGTAAATTTTAGATGTTAGATGACTTTGAAGCAAATTGACTTCACAAAGGAAAAGCTTAGAATTATTAATAATGGAACGAAAAGGTAATTCTTTAATTTCATTGATTTCGTTCCAATAGGATGGAATACGAACTTGACATTTTGGTCGAAGTTTAATGTTTTAATATTAACGTGAGCTAAAAAGTTGGTACTATTTTACAGCCCGAAAACAGAAAGGATATGTTAAGAAAATCAAGAATATTTGTACATTCAAACTCTACAGCACAGGTCTCACTTTATTTTCTCCTACCCTTCTGCTTTGCGCTCGGTTTTGGCGAGGAAGAGGATGAGTAGGACGATGAAACGCTTGATCGGTTGTTCTCCGCTAAGTCCTTGGATAATGCCTTTTGAACCTCATCTTTAAGTTCCATGAACCGAGCCTTCTTCTTCCGCTGCTCCTCTGGAGTTCCCTTTTCAAGGAACAGAAGGTCGGGCATGTCATCGGCTAAAAAGTTGTCGAGAACTTCCGAGCAATGAGGGAAAAAGCGTCGACCCGTATTCACTGTGATCAGGTGTGATGTTACATGAGTGATGAGCTCATCTTACACTCAATTGGATGAAAAGTAGAAAGTAATTAATAGATAGTGTTCTGAAAAGTACCTGTTTTCATTAGAGCTTTCATTCTTGATTGGAGTCTTTTGGTTCGCATGGATGGTGTTTCATTCGAGTCAAGCTTCAGCAAGTTGCCAGATGACC

Coding sequence (CDS)

ATGTCTGGTGTCAATGCTAACTCCCTGCTGAGCCCCATGCCAAGAATTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTCGAATGGGTGTAAGAGATTGAGTCTGTTTTCTTGTGGGGTTTTGGCATCCTCTGCTGCTGTAGCCAACCCTTCAAGATCCTCTGAAGAAAGGGTGTATGAAGTTGTTCTGAAACAAGCAGCTCTTGTGAGGGAGCTGCCCAAGAGGGATGGAGAAACAGCTTTGGATTGGGATAAAACCATACAAAATGAGGGTATTAGTGATGGGAATCTCTTGGATGAAGCATATTCTCGCTGTGGTGAGGTCTGTGCTGAGTATGCCAAAACATTTTATCTGGGGACACAGCTTATGACACCGGAGCGACGAAGAGCGGTGTGGGCGATTTACGTGTGGTGCAGAAGGACGGACGAGCTCGTGGATGGACCAAATGCTTCACACATCACACCTAAGGCTCTCGAGCGATGGGAGAAACGACTAACCGATCTGTTTGAGGGTCGAGCGTATGATATGTATGATGCTGCTCTTTCTGATACAGTCTCAAAATACCCCGTTGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACTTGCGAAAATCGAGATACGAGAACTTCGACGAGCTTTACCTTTACTGCTATTATGTTGCTGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTTGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACTAACATTCTAAGAGACGTTGGAGAAGATGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCTGGGCTATGCGACGATGACATATTCCGAGGGAAAGTGACCGAAAAGTGGCGGAGTTTCATGAAAGGACAGATAAAAAGAGCAAGAATGTTCTTTGATGAGGCTGAGAAGGGCATTGGAGAGCTGAATGAAGCCAGTAGATGGCCAGTGTGGGCGTCCTTAATGCTTTATAAGCAAATATTAGATTCCATTGAAGCTAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAAAGCTGTGGTGGCCCCTCAAATTTCAAAGATGTGGTAA

Protein sequence

MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Homology
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BLAST of Cp4.1LG01g00990 vs. Swiss-Prot
Match: PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 4.2e-161
Identity = 281/367 (76.57%), Postives = 317/367 (86.38%), Query Frame = 1 

Query: 32  RLSLFSCGVL----ASSAAVANPSRSSEERVYEVVLKQAALVRELPKRDGETALD----- 91
           R S FSC V+      SA  ANP R+SEERVYEVVLKQAALVRE  +      LD     
Sbjct: 28  RKSRFSCRVMKLSTGVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTG 87

Query: 92  ---WDKTIQNE-GISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWC 151
              +DK+  ++ G+   NLL+EAY RCGEVCAEYAKTFYLGT LMTPERRRAVWAIYVWC
Sbjct: 88  SKSFDKSENDDAGMKSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWC 147

Query: 152 RRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDM 211
           RRTDELVDGPNASHITPKAL+RWEKRL DLF+G+ YDMYDAAL+DTVS YPVDIQPFKDM
Sbjct: 148 RRTDELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDM 207

Query: 212 IEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGL 271
           I+GMR+DL+KSRY+ FDELYLYCYYVAGTVGLMSVPVMG+APESKA+ ESVY+AALALG+
Sbjct: 208 IDGMRMDLKKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGI 267

Query: 272 ANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMF 331
           ANQLTNILRDVGEDARRGR+YLPQ+EL  AG+  + IF+GKVT+KWRSFMKGQIKRARMF
Sbjct: 268 ANQLTNILRDVGEDARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMF 327

Query: 332 FDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAF 386
           FDEAEKG+ EL+ ASRWPVWASL+LYKQILD+IEANDYDNFTKRAYVGKAKKL+SLP+A+
Sbjct: 328 FDEAEKGVAELSSASRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSLPLAY 387

[Close]
BLAST of Cp4.1LG01g00990 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 5.1e-151
Identity = 263/352 (74.72%), Postives = 306/352 (86.93%), Query Frame = 1 

Query: 39  GVLASSAAVANPSR----SSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISD 98
           G +  ++ VANP+     S+E++VY VV+KQAALV+   +  GE  LD    I   G   
Sbjct: 74  GSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGE--LDVKPDIVLPGTL- 133

Query: 99  GNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHIT 158
            +LL+EAY RCGEVCAEYAKTFYLGT LMTPER++A+WAIYVWCRRTDELVDGPNASHIT
Sbjct: 134 -SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHIT 193

Query: 159 PKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENF 218
           P AL+RWE RL +LF+GR +DM DAAL+DTV+K+PVDIQPFKDMIEGMR+DLRKSRY+NF
Sbjct: 194 PTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNF 253

Query: 219 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQL-TNILRDVGEDA 278
           DELYLYCYYVAGTVGLMSVPVMG+APES+AS ESVYNAALALG+ANQ   NILRDVGEDA
Sbjct: 254 DELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDA 313

Query: 279 RRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEAS 338
           RRGR+YLPQDELAQAGL D+DIF G+VT+KWR+FMK QIKRARMFFDEAEKG+ ELN+AS
Sbjct: 314 RRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKAS 373

Query: 339 RWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAP 386
           RWPVWASL+LY+QILD IEANDYDNFTKRAYV KAKK+L+LP+A+G+A++ P
Sbjct: 374 RWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGP 421

[Close]
BLAST of Cp4.1LG01g00990 vs. Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2)

HSP 1 Score: 530.0 bits (1364), Expect = 2.2e-149
Identity = 263/371 (70.89%), Postives = 311/371 (83.83%), Query Frame = 1 

Query: 22  SSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQAALVRELPKRDGETAL 81
           SSS   N  +R+ + S  ++AS +     + SSEE+VY VVLKQAALV    K+   ++ 
Sbjct: 55  SSSFVRNRSRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVN---KQLRSSSY 114

Query: 82  DWDKTIQNEGISDGNL--LDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCR 141
           D D     + +  G+L  L EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCR
Sbjct: 115 DLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCR 174

Query: 142 RTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMI 201
           RTDELVDGPNASHITP AL+RWE RL DLF GR +DM DAAL+DTV++YPVDIQPF+DMI
Sbjct: 175 RTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMI 234

Query: 202 EGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLA 261
           EGMR+DL+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+A
Sbjct: 235 EGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIA 294

Query: 262 NQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFF 321
           NQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRARMFF
Sbjct: 295 NQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFF 354

Query: 322 DEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFG 381
           DEAEKG+ EL+ ASRWPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +LP+A+ 
Sbjct: 355 DEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYA 414

Query: 382 KAVVAPQISKM 391
           K+V+    S++
Sbjct: 415 KSVLKTSSSRL 420

[Close]
BLAST of Cp4.1LG01g00990 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 3.7e-149
Identity = 256/351 (72.93%), Postives = 301/351 (85.75%), Query Frame = 1 

Query: 41  LASSAAVANPSR----SSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGN 100
           L  S+ VANP+     SSE++VY+VVLKQAALV++  K   ++       ++ + +  G 
Sbjct: 67  LIRSSLVANPAGEATISSEQKVYDVVLKQAALVKDQTKSSRKST-----DVKPDIVLPGT 126

Query: 101 --LLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHIT 160
             LL +AY RCGEVCAEYAKTFYLGT LMTPERRRA+WAIYVWCRRTDELVDG NASHIT
Sbjct: 127 VYLLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHIT 186

Query: 161 PKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENF 220
           P AL+RWE RL DLF GR YDM+DAALSDTVS++PVDIQPF DM+EGMR+DL+KSRY+NF
Sbjct: 187 PSALDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNF 246

Query: 221 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 280
           DELYLYCYYVAGTVGLMSVPVMG+APES A  ESVYNAALALG+ANQLTNILRDVGEDAR
Sbjct: 247 DELYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDAR 306

Query: 281 RGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASR 340
           RGR+YLPQDELA+AGL D+D+F GKVT+KWRSFMK QIKRAR FF++AEKG+ EL++ASR
Sbjct: 307 RGRIYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASR 366

Query: 341 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAP 386
           WPVWASL+LY+QILD IEANDY+NFTKRAYV K K+L +LP+A+GK+++ P
Sbjct: 367 WPVWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]
BLAST of Cp4.1LG01g00990 vs. Swiss-Prot
Match: PSY_ONCHC (Phytoene synthase, chloroplastic OS=Oncidium hybrid cultivar GN=PSY PE=2 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 4.1e-148
Identity = 253/350 (72.29%), Postives = 296/350 (84.57%), Query Frame = 1 

Query: 44  SAAVANP----SRSSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLD 103
           S+ V NP    + SSE++VY+VVLKQAALV +  +         ++T+  E      LL+
Sbjct: 66  SSLVVNPVGEVAISSEQKVYDVVLKQAALVEQQLR---------NRTVLEEKTGTTFLLN 125

Query: 104 EAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALE 163
           EAY RCG++C EYAKTFYLGT LMTPERRRA+WAIYVWCRRTDELVDGPNASHITP AL+
Sbjct: 126 EAYDRCGQICEEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPSALD 185

Query: 164 RWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYL 223
           RWE RL DLF GR YDM DA+LSDTV  +PVDIQPFKDMIEGMR+DL+KSRY+NFDELYL
Sbjct: 186 RWEARLEDLFAGRPYDMLDASLSDTVVNFPVDIQPFKDMIEGMRMDLKKSRYKNFDELYL 245

Query: 224 YCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVY 283
           YCYYVAGTVGLMSVPVMG+ PES A+ ESVYNAAL+LG+ANQLTNILRDVGED RRGRVY
Sbjct: 246 YCYYVAGTVGLMSVPVMGIDPESDATTESVYNAALSLGIANQLTNILRDVGEDTRRGRVY 305

Query: 284 LPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWA 343
           LPQDELA+AGL D+DIF GKVT++WR+FMK QIKRAR FF EAEKGI ELN+ASRWPV A
Sbjct: 306 LPQDELAEAGLSDEDIFNGKVTDRWRNFMKNQIKRARTFFQEAEKGIAELNQASRWPVLA 365

Query: 344 SLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQISK 390
           SL+LY+QILD IEANDY+NFTKRAYV KAKKL+++P+A+G++++ P + K
Sbjct: 366 SLLLYRQILDEIEANDYNNFTKRAYVSKAKKLMAVPVAYGRSLIRPSMKK 406

[Close]
BLAST of Cp4.1LG01g00990 vs. TrEMBL
Match: U3L2Q6_CUCPE (Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 2.3e-222
Identity = 390/391 (99.74%), Postives = 390/391 (99.74%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELN ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 392
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of Cp4.1LG01g00990 vs. TrEMBL
Match: U3L2P5_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 3.0e-222
Identity = 389/391 (99.49%), Postives = 391/391 (100.00%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDW+KTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRG+VYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 392
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of Cp4.1LG01g00990 vs. TrEMBL
Match: A0A0A0KVC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 9.6e-197
Identity = 352/385 (91.43%), Postives = 361/385 (93.77%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLL P PRI  SSS       G KRLS FS GVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPF-----GSKRLSFFSDGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRE-PKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           T+KWR FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAP 386
           KRAYVGKAKKLLSLPIAFG+A+V P
Sbjct: 361 KRAYVGKAKKLLSLPIAFGRAMVGP 379

[Close]
BLAST of Cp4.1LG01g00990 vs. TrEMBL
Match: T1RK41_CUCME (Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 6.9e-195
Identity = 348/385 (90.39%), Postives = 359/385 (93.25%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLL P PRI  SSS       G KRLS FS G LASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPF-----GSKRLSFFSDGALASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRE-PKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAA
Sbjct: 121 QLMTPERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYE+FDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           T+KWR FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAP 386
           KRAYVGKAKKLLSLPIAFG+A+  P
Sbjct: 361 KRAYVGKAKKLLSLPIAFGRAMAGP 379

[Close]
BLAST of Cp4.1LG01g00990 vs. TrEMBL
Match: C5I849_FRAAN (Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 2.5e-176
Identity = 314/382 (82.20%), Postives = 347/382 (90.84%), Query Frame = 1 

Query: 5   NANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLK 64
           NA SLLS MPRI S       RS  C RLS FS G++A S AVA+P RSSEERVYEVVLK
Sbjct: 14  NATSLLSLMPRIGSPK-----RSKFCSRLS-FSPGIIAYSGAVAHPPRSSEERVYEVVLK 73

Query: 65  QAALVRELPKRDGETALDWDKTIQ-NEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLM 124
           QAALVRE  +R  E ALD+D+ I+ ++G+++ +LL+EAY RCGEVCAEYAKTFYLGT LM
Sbjct: 74  QAALVRE-QRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLM 133

Query: 125 TPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSD 184
           TPERRRAVWAIYVWCRRTDELVDGPNAS+ITPKAL+RWEKRLTDLFEGR YDMYDAALSD
Sbjct: 134 TPERRRAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSD 193

Query: 185 TVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESK 244
           TV+KYPVDIQPFKDM+EGMRLDLRKSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APESK
Sbjct: 194 TVTKYPVDIQPFKDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESK 253

Query: 245 ASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEK 304
           AS ESVYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELAQAGL DDDIFRGKVT+K
Sbjct: 254 ASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGKVTDK 313

Query: 305 WRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRA 364
           W+SFMKGQIKRARMFFDEAEKG+ ELN ASRWPVWASL+LY+QILD+IEAN YDNFTKRA
Sbjct: 314 WQSFMKGQIKRARMFFDEAEKGVAELNSASRWPVWASLLLYRQILDAIEANGYDNFTKRA 373

Query: 365 YVGKAKKLLSLPIAFGKAVVAP 386
           YVGKAKKL+SLPIA+G+A++ P
Sbjct: 374 YVGKAKKLVSLPIAYGRAIIGP 388

[Close]
BLAST of Cp4.1LG01g00990 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-147
Identity = 263/386 (68.13%), Postives = 311/386 (80.57%), Query Frame = 1 

Query: 22  SSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQAALVRELPKRDGETAL 81
           SSS   N  +R+ + S  ++AS +     + SSEE+VY VVLKQAALV    K+   ++ 
Sbjct: 55  SSSFVRNRSRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVN---KQLRSSSY 114

Query: 82  DWDKTIQNEGISDGNL--LDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYV--- 141
           D D     + +  G+L  L EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYV   
Sbjct: 115 DLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLK 174

Query: 142 ------------WCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDT 201
                       WCRRTDELVDGPNASHITP AL+RWE RL DLF GR +DM DAAL+DT
Sbjct: 175 VDFYKQSIVALVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADT 234

Query: 202 VSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 261
           V++YPVDIQPF+DMIEGMR+DL+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA
Sbjct: 235 VARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKA 294

Query: 262 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKW 321
           + ESVYNAALALG+ANQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KW
Sbjct: 295 TTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKW 354

Query: 322 RSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 381
           R+FMK Q+KRARMFFDEAEKG+ EL+ ASRWPVWASL+LY++ILD IEANDY+NFTKRAY
Sbjct: 355 RNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAY 414

Query: 382 VGKAKKLLSLPIAFGKAVVAPQISKM 391
           VGK KK+ +LP+A+ K+V+    S++
Sbjct: 415 VGKVKKIAALPLAYAKSVLKTSSSRL 435

[Close]
BLAST of Cp4.1LG01g00990 vs. NCBI nr
Match: gi|524852994|gb|AFV33363.1| (phytoene synthase [Cucurbita pepo])

HSP 1 Score: 779.2 bits (2011), Expect = 3.3e-222
Identity = 390/391 (99.74%), Postives = 390/391 (99.74%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELN ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 392
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of Cp4.1LG01g00990 vs. NCBI nr
Match: gi|524852996|gb|AFV33364.1| (phytoene synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.9 bits (2010), Expect = 4.3e-222
Identity = 389/391 (99.49%), Postives = 391/391 (100.00%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDW+KTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRG+VYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 392
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of Cp4.1LG01g00990 vs. NCBI nr
Match: gi|449460028|ref|XP_004147748.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 694.1 bits (1790), Expect = 1.4e-196
Identity = 352/385 (91.43%), Postives = 361/385 (93.77%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLL P PRI  SSS       G KRLS FS GVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPF-----GSKRLSFFSDGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRE-PKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           T+KWR FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAP 386
           KRAYVGKAKKLLSLPIAFG+A+V P
Sbjct: 361 KRAYVGKAKKLLSLPIAFGRAMVGP 379

[Close]
BLAST of Cp4.1LG01g00990 vs. NCBI nr
Match: gi|659101861|ref|XP_008451831.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 688.0 bits (1774), Expect = 9.9e-195
Identity = 348/385 (90.39%), Postives = 359/385 (93.25%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLL P PRI  SSS       G KRLS FS G LASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPF-----GSKRLSFFSDGALASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRE-PKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAA
Sbjct: 121 QLMTPERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYE+FDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           T+KWR FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAP 386
           KRAYVGKAKKLLSLPIAFG+A+  P
Sbjct: 361 KRAYVGKAKKLLSLPIAFGRAMAGP 379

[Close]
BLAST of Cp4.1LG01g00990 vs. NCBI nr
Match: gi|238836224|gb|ACR61392.1| (phytoene synthase protein [Fragaria x ananassa])

HSP 1 Score: 626.3 bits (1614), Expect = 3.5e-176
Identity = 314/382 (82.20%), Postives = 347/382 (90.84%), Query Frame = 1 

Query: 5   NANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLK 64
           NA SLLS MPRI S       RS  C RLS FS G++A S AVA+P RSSEERVYEVVLK
Sbjct: 14  NATSLLSLMPRIGSPK-----RSKFCSRLS-FSPGIIAYSGAVAHPPRSSEERVYEVVLK 73

Query: 65  QAALVRELPKRDGETALDWDKTIQ-NEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLM 124
           QAALVRE  +R  E ALD+D+ I+ ++G+++ +LL+EAY RCGEVCAEYAKTFYLGT LM
Sbjct: 74  QAALVRE-QRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLM 133

Query: 125 TPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSD 184
           TPERRRAVWAIYVWCRRTDELVDGPNAS+ITPKAL+RWEKRLTDLFEGR YDMYDAALSD
Sbjct: 134 TPERRRAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSD 193

Query: 185 TVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESK 244
           TV+KYPVDIQPFKDM+EGMRLDLRKSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APESK
Sbjct: 194 TVTKYPVDIQPFKDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESK 253

Query: 245 ASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEK 304
           AS ESVYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELAQAGL DDDIFRGKVT+K
Sbjct: 254 ASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGKVTDK 313

Query: 305 WRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRA 364
           W+SFMKGQIKRARMFFDEAEKG+ ELN ASRWPVWASL+LY+QILD+IEAN YDNFTKRA
Sbjct: 314 WQSFMKGQIKRARMFFDEAEKGVAELNSASRWPVWASLLLYRQILDAIEANGYDNFTKRA 373

Query: 365 YVGKAKKLLSLPIAFGKAVVAP 386
           YVGKAKKL+SLPIA+G+A++ P
Sbjct: 374 YVGKAKKLVSLPIAYGRAIIGP 388

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g00990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSY_DAUCA4.2e-16176.57Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1[more]
PSY_CUCME5.1e-15174.72Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1[more]
PSY_ARATH2.2e-14970.89Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2[more]
PSY_NARPS3.7e-14972.93Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1[more]
PSY_ONCHC4.1e-14872.29Phytoene synthase, chloroplastic OS=Oncidium hybrid cultivar GN=PSY PE=2 SV=1[more]
BLAST of Cp4.1LG01g00990 vs. TrEMBL
Match NameE-valueIdentityDescription
U3L2Q6_CUCPE2.3e-22299.74Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1[more]
U3L2P5_CUCPE3.0e-22299.49Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1[more]
A0A0A0KVC2_CUCSA9.6e-19791.43Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1[more]
T1RK41_CUCME6.9e-19590.39Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1[more]
C5I849_FRAAN2.5e-17682.20Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1[more]
BLAST of Cp4.1LG01g00990 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17230.31.3e-14768.13 PHYTOENE SYNTHASE[more]
BLAST of Cp4.1LG01g00990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|524852994|gb|AFV33363.1|3.3e-22299.74phytoene synthase [Cucurbita pepo][more]
gi|524852996|gb|AFV33364.1|4.3e-22299.49phytoene synthase [Cucurbita pepo subsp. pepo][more]
gi|449460028|ref|XP_004147748.1|1.4e-19691.43PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus][more]
gi|659101861|ref|XP_008451831.1|9.9e-19590.39PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo][more]
gi|238836224|gb|ACR61392.1|3.5e-17682.20phytoene synthase protein [Fragaria x ananassa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR019845Squalene/phytoene_synthase_CS
IPR008949Isoprenoid_synthase_dom_sf
IPR002060Squ/phyt_synthse
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0006696 ergosterol biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
molecular_function GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0016740 transferase activity
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0051996 squalene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g00990.1Cp4.1LG01g00990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 112..367
score: 1.7
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 98..384
score: 8.1E
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 101..383
score: 2.55
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 220..235
scor
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 256..281
scor
NoneNo IPR availablePANTHERPTHR31480FAMILY NOT NAMEDcoord: 16..386
score: 4.5E
NoneNo IPR availablePANTHERPTHR31480:SF4SUBFAMILY NOT NAMEDcoord: 16..386
score: 4.5E