CmaCh04G006250 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G006250
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhytoene synthase
LocationCma_Chr04 : 3203989 .. 3206323 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCCACCATAAACGACTTTAAATTCATTATGGATGAAAGATTGGTAGTCATCCATTTACCCTTTTTGCTCTCTTTCTCTCTCTCTCTCTTTGAATCTCTCAGATAAAAGGCTTACAGAAAAGCTGCAAGAGGAGGAGAAGAAGAAAATTCGAGGGGGTTTTTGTGGGTGGCTGTGAAGAGAAGATGTCTGGTGTCAATGCTAACTCCCTGCTGAGCCCCATGCCAAGAATTAGCAGCAGCAGGTCAAATGGGTGTAAGAGATTGAGTCTGTTTTCTTGTGGGGTTTTGGCATCCTCTGCTGCTGTAGCCAACCCTTCAAGATCCTCTGAAGAAAGGGTGTATGAAGTTGTTCTGAAACAAGCAGCTCTTGTGAGGGAGCTGCCCAAGAGGGATGGAGAAACAGCTTTGGATTGGGATAAAACCATACAAAATGAGGGTATTAGTGATGGGAATCTCTTGGATGAGGCATATTCTCGCTGTGGTGAGGTCTGTGCTGAGTATGCCAAAACATTTTATCTGGGTAAACTTTCCCCTCTTTGCTCTACTGCTTCATTTTTGTCTTCCCATTTTTCACTGTTGGGATATGAATTGTTTGGCTGCCATAACAATGGATCTGATAGTGATAATGGTGGAATGATATCTGTCCCTTGGTGATCCAGATTGTGAAGAAAAGAGGCATAGTTTTATTGTAACCACAGATTCTGATAAACTCTTCACATTTATCAACTCTGTATCCCAACCTGCAAATGATTGTTTGATTGTGCCTCTTTCTTGCTGTTCTTAGGGACACAGCTTATGACACCGGAGAGACGAAGAGCGGTGTGGGCGATTTACGGTATCAGTCATCCTCTTCCTCCAGCATCTTATCTTTTTGTCTACTGCAAACTTTGTCCATTTCTATAGAACAAGTTGGCTGTATTGCTCCATGTGGTAGCCATGCTTTTCTGGTTATTTTTGTTGATGATTCAGGTTTTTTTTTCATAAGTTCTCGAACTTCAAAAATTGTACATTGGTCGTTTGATAACTGTTTGATTTTTGGTTTTTCGAAATTGTGTTTGTTTTCTTACCATTTTCTACCATAGTTTCATCGTTCTTAAGAAAACATTTAACGTCTTAGATGAATTTTAACGTACTACTGACGTATAGGTCGTTTGCCATAGCAGTTCAGTGTTTTCTTTTTGATGTTATCTTCAGTTTTGAACATTCAAGAGTGTAACTCTTTGTAATGCAGTTTGGTGCAGAAGGACCGATGAGCTCGTGGATGGACCTAATGCTTCACACATCACACCTAAGGCTCTCGAGCGATGGGAGAAACGACTAACCGATCTGTTTGAGGGTCGAGCGTATGATATGTATGATGCTGCTCTTTCTGATACAGTCTCAAAATACCCTGTTGACATTCAGGTAAACTCACTCCTTCCTTCGTGATATGAGAACTCTGGGCTGTCATGGTTAACAAATAATCAGATCCCAATGATTTAAAACAAGCAACGATAATTTAACTACTCTCCATCTTCGAGTAAAGATGGCTCACGTATGTTTCAATTCTCTTGGCTTGCAATTATACGTTGTGTTTCGACAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACTTGCGAAAATCGAGATACGAGAACTTCGACGAGCTTTACCTTTACTGCTATTATGTTGCTGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCTGAGTCGAAAGCTTCAGTTGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACTAACATTCTAAGAGACGTTGGAGAAGAGTAAGCTTTCTTCCACAATCTTAGCAACTAGAGTTACTTTTAACATGTACAAACTACAATGCCACAAGGAAATGTTTTCGAACTTTTCGAAACTTAGCGATATGTTCTTGTTTGTTCGATCTTTGAGGAGTTGGGTCACGTTTTGTTTCGACAGTGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCTGGGCTATGCGACGATGACATATTCCGAGGGAAAGTGACCGAAAAGTGGCGGAGTTTCATGAAAGGACAGATAAAAAGAGCAAGAATGTTCTTTGATGAGGCTGAGAAGGGCATTGGAGAGCTGAATGAAGCCAGTAGATGGCCAGTGTGGGCGTCCTTAATGCTTTATAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAAAGCTGTGGTGGCCCCTCAAATTTCAAAGATGTGGTAA

mRNA sequence

AATCCCACCATAAACGACTTTAAATTCATTATGGATGAAAGATTGGTAGTCATCCATTTACCCTTTTTGCTCTCTTTCTCTCTCTCTCTCTTTGAATCTCTCAGATAAAAGGCTTACAGAAAAGCTGCAAGAGGAGGAGAAGAAGAAAATTCGAGGGGGTTTTTGTGGGTGGCTGTGAAGAGAAGATGTCTGGTGTCAATGCTAACTCCCTGCTGAGCCCCATGCCAAGAATTAGCAGCAGCAGGTCAAATGGGTGTAAGAGATTGAGTCTGTTTTCTTGTGGGGTTTTGGCATCCTCTGCTGCTGTAGCCAACCCTTCAAGATCCTCTGAAGAAAGGGTGTATGAAGTTGTTCTGAAACAAGCAGCTCTTGTGAGGGAGCTGCCCAAGAGGGATGGAGAAACAGCTTTGGATTGGGATAAAACCATACAAAATGAGGGTATTAGTGATGGGAATCTCTTGGATGAGGCATATTCTCGCTGTGGTGAGGTCTGTGCTGAGTATGCCAAAACATTTTATCTGGGGACACAGCTTATGACACCGGAGAGACGAAGAGCGGTGTGGGCGATTTACGTTTGGTGCAGAAGGACCGATGAGCTCGTGGATGGACCTAATGCTTCACACATCACACCTAAGGCTCTCGAGCGATGGGAGAAACGACTAACCGATCTGTTTGAGGGTCGAGCGTATGATATGTATGATGCTGCTCTTTCTGATACAGTCTCAAAATACCCTGTTGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACTTGCGAAAATCGAGATACGAGAACTTCGACGAGCTTTACCTTTACTGCTATTATGTTGCTGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCTGAGTCGAAAGCTTCAGTTGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACTAACATTCTAAGAGACGTTGGAGAAGATGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCTGGGCTATGCGACGATGACATATTCCGAGGGAAAGTGACCGAAAAGTGGCGGAGTTTCATGAAAGGACAGATAAAAAGAGCAAGAATGTTCTTTGATGAGGCTGAGAAGGGCATTGGAGAGCTGAATGAAGCCAGTAGATGGCCAGTGTGGGCGTCCTTAATGCTTTATAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAAAGCTGTGGTGGCCCCTCAAATTTCAAAGATGTGGTAA

Coding sequence (CDS)

ATGTCTGGTGTCAATGCTAACTCCCTGCTGAGCCCCATGCCAAGAATTAGCAGCAGCAGGTCAAATGGGTGTAAGAGATTGAGTCTGTTTTCTTGTGGGGTTTTGGCATCCTCTGCTGCTGTAGCCAACCCTTCAAGATCCTCTGAAGAAAGGGTGTATGAAGTTGTTCTGAAACAAGCAGCTCTTGTGAGGGAGCTGCCCAAGAGGGATGGAGAAACAGCTTTGGATTGGGATAAAACCATACAAAATGAGGGTATTAGTGATGGGAATCTCTTGGATGAGGCATATTCTCGCTGTGGTGAGGTCTGTGCTGAGTATGCCAAAACATTTTATCTGGGGACACAGCTTATGACACCGGAGAGACGAAGAGCGGTGTGGGCGATTTACGTTTGGTGCAGAAGGACCGATGAGCTCGTGGATGGACCTAATGCTTCACACATCACACCTAAGGCTCTCGAGCGATGGGAGAAACGACTAACCGATCTGTTTGAGGGTCGAGCGTATGATATGTATGATGCTGCTCTTTCTGATACAGTCTCAAAATACCCTGTTGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACTTGCGAAAATCGAGATACGAGAACTTCGACGAGCTTTACCTTTACTGCTATTATGTTGCTGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCTGAGTCGAAAGCTTCAGTTGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACTAACATTCTAAGAGACGTTGGAGAAGATGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCTGGGCTATGCGACGATGACATATTCCGAGGGAAAGTGACCGAAAAGTGGCGGAGTTTCATGAAAGGACAGATAAAAAGAGCAAGAATGTTCTTTGATGAGGCTGAGAAGGGCATTGGAGAGCTGAATGAAGCCAGTAGATGGCCAGTGTGGGCGTCCTTAATGCTTTATAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAAAGCTGTGGTGGCCCCTCAAATTTCAAAGATGTGGTAA

Protein sequence

MSGVNANSLLSPMPRISSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Homology
[Close]
BLAST of CmaCh04G006250 vs. Swiss-Prot
Match: PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 3.2e-161
Identity = 281/367 (76.57%), Postives = 317/367 (86.38%), Query Frame = 1 

Query: 26  RLSLFSCGVL----ASSAAVANPSRSSEERVYEVVLKQAALVRELPKRDGETALD----- 85
           R S FSC V+      SA  ANP R+SEERVYEVVLKQAALVRE  +      LD     
Sbjct: 28  RKSRFSCRVMKLSTGVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTG 87

Query: 86  ---WDKTIQNE-GISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWC 145
              +DK+  ++ G+   NLL+EAY RCGEVCAEYAKTFYLGT LMTPERRRAVWAIYVWC
Sbjct: 88  SKSFDKSENDDAGMKSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWC 147

Query: 146 RRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDM 205
           RRTDELVDGPNASHITPKAL+RWEKRL DLF+G+ YDMYDAAL+DTVS YPVDIQPFKDM
Sbjct: 148 RRTDELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDM 207

Query: 206 IEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGL 265
           I+GMR+DL+KSRY+ FDELYLYCYYVAGTVGLMSVPVMG+APESKA+ ESVY+AALALG+
Sbjct: 208 IDGMRMDLKKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGI 267

Query: 266 ANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMF 325
           ANQLTNILRDVGEDARRGR+YLPQ+EL  AG+  + IF+GKVT+KWRSFMKGQIKRARMF
Sbjct: 268 ANQLTNILRDVGEDARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMF 327

Query: 326 FDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAF 380
           FDEAEKG+ EL+ ASRWPVWASL+LYKQILD+IEANDYDNFTKRAYVGKAKKL+SLP+A+
Sbjct: 328 FDEAEKGVAELSSASRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSLPLAY 387

[Close]
BLAST of CmaCh04G006250 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 5.1e-151
Identity = 263/352 (74.72%), Postives = 306/352 (86.93%), Query Frame = 1 

Query: 33  GVLASSAAVANPSR----SSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISD 92
           G +  ++ VANP+     S+E++VY VV+KQAALV+   +  GE  LD    I   G   
Sbjct: 74  GSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGE--LDVKPDIVLPGTL- 133

Query: 93  GNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHIT 152
            +LL+EAY RCGEVCAEYAKTFYLGT LMTPER++A+WAIYVWCRRTDELVDGPNASHIT
Sbjct: 134 -SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHIT 193

Query: 153 PKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENF 212
           P AL+RWE RL +LF+GR +DM DAAL+DTV+K+PVDIQPFKDMIEGMR+DLRKSRY+NF
Sbjct: 194 PTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNF 253

Query: 213 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQL-TNILRDVGEDA 272
           DELYLYCYYVAGTVGLMSVPVMG+APES+AS ESVYNAALALG+ANQ   NILRDVGEDA
Sbjct: 254 DELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDA 313

Query: 273 RRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEAS 332
           RRGR+YLPQDELAQAGL D+DIF G+VT+KWR+FMK QIKRARMFFDEAEKG+ ELN+AS
Sbjct: 314 RRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKAS 373

Query: 333 RWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAP 380
           RWPVWASL+LY+QILD IEANDYDNFTKRAYV KAKK+L+LP+A+G+A++ P
Sbjct: 374 RWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGP 421

[Close]
BLAST of CmaCh04G006250 vs. Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2)

HSP 1 Score: 533.1 bits (1372), Expect = 2.5e-150
Identity = 261/356 (73.31%), Postives = 305/356 (85.67%), Query Frame = 1 

Query: 35  LASSAAVANPSR----SSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGN 94
           + SS+ VA+PS     SSEE+VY VVLKQAALV    K+   ++ D D     + +  G+
Sbjct: 68  VVSSSLVASPSGEIALSSEEKVYNVVLKQAALVN---KQLRSSSYDLDVKKPQDVVLPGS 127

Query: 95  L--LDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHIT 154
           L  L EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGPNASHIT
Sbjct: 128 LSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHIT 187

Query: 155 PKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENF 214
           P AL+RWE RL DLF GR +DM DAAL+DTV++YPVDIQPF+DMIEGMR+DL+KSRY+NF
Sbjct: 188 PMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNF 247

Query: 215 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 274
           D+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNILRDVGEDAR
Sbjct: 248 DDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDAR 307

Query: 275 RGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASR 334
           RGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRARMFFDEAEKG+ EL+ ASR
Sbjct: 308 RGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASR 367

Query: 335 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQISKM 385
           WPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +LP+A+ K+V+    S++
Sbjct: 368 WPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSSSRL 420

[Close]
BLAST of CmaCh04G006250 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 3.6e-149
Identity = 256/351 (72.93%), Postives = 301/351 (85.75%), Query Frame = 1 

Query: 35  LASSAAVANPSR----SSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGN 94
           L  S+ VANP+     SSE++VY+VVLKQAALV++  K   ++       ++ + +  G 
Sbjct: 67  LIRSSLVANPAGEATISSEQKVYDVVLKQAALVKDQTKSSRKST-----DVKPDIVLPGT 126

Query: 95  --LLDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHIT 154
             LL +AY RCGEVCAEYAKTFYLGT LMTPERRRA+WAIYVWCRRTDELVDG NASHIT
Sbjct: 127 VYLLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHIT 186

Query: 155 PKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENF 214
           P AL+RWE RL DLF GR YDM+DAALSDTVS++PVDIQPF DM+EGMR+DL+KSRY+NF
Sbjct: 187 PSALDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNF 246

Query: 215 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 274
           DELYLYCYYVAGTVGLMSVPVMG+APES A  ESVYNAALALG+ANQLTNILRDVGEDAR
Sbjct: 247 DELYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDAR 306

Query: 275 RGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASR 334
           RGR+YLPQDELA+AGL D+D+F GKVT+KWRSFMK QIKRAR FF++AEKG+ EL++ASR
Sbjct: 307 RGRIYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASR 366

Query: 335 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAP 380
           WPVWASL+LY+QILD IEANDY+NFTKRAYV K K+L +LP+A+GK+++ P
Sbjct: 367 WPVWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]
BLAST of CmaCh04G006250 vs. Swiss-Prot
Match: PSY_ONCHC (Phytoene synthase, chloroplastic OS=Oncidium hybrid cultivar GN=PSY PE=2 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 4.0e-148
Identity = 253/350 (72.29%), Postives = 296/350 (84.57%), Query Frame = 1 

Query: 38  SAAVANP----SRSSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLD 97
           S+ V NP    + SSE++VY+VVLKQAALV +  +         ++T+  E      LL+
Sbjct: 66  SSLVVNPVGEVAISSEQKVYDVVLKQAALVEQQLR---------NRTVLEEKTGTTFLLN 125

Query: 98  EAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALE 157
           EAY RCG++C EYAKTFYLGT LMTPERRRA+WAIYVWCRRTDELVDGPNASHITP AL+
Sbjct: 126 EAYDRCGQICEEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPSALD 185

Query: 158 RWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYL 217
           RWE RL DLF GR YDM DA+LSDTV  +PVDIQPFKDMIEGMR+DL+KSRY+NFDELYL
Sbjct: 186 RWEARLEDLFAGRPYDMLDASLSDTVVNFPVDIQPFKDMIEGMRMDLKKSRYKNFDELYL 245

Query: 218 YCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVY 277
           YCYYVAGTVGLMSVPVMG+ PES A+ ESVYNAAL+LG+ANQLTNILRDVGED RRGRVY
Sbjct: 246 YCYYVAGTVGLMSVPVMGIDPESDATTESVYNAALSLGIANQLTNILRDVGEDTRRGRVY 305

Query: 278 LPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWA 337
           LPQDELA+AGL D+DIF GKVT++WR+FMK QIKRAR FF EAEKGI ELN+ASRWPV A
Sbjct: 306 LPQDELAEAGLSDEDIFNGKVTDRWRNFMKNQIKRARTFFQEAEKGIAELNQASRWPVLA 365

Query: 338 SLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQISK 384
           SL+LY+QILD IEANDY+NFTKRAYV KAKKL+++P+A+G++++ P + K
Sbjct: 366 SLLLYRQILDEIEANDYNNFTKRAYVSKAKKLMAVPVAYGRSLIRPSMKK 406

[Close]
BLAST of CmaCh04G006250 vs. TrEMBL
Match: U3L2Q6_CUCPE (Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 5.2e-219
Identity = 384/391 (98.21%), Postives = 384/391 (98.21%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISS------SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISS      SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELN ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 386
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh04G006250 vs. TrEMBL
Match: U3L2P5_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 6.8e-219
Identity = 383/391 (97.95%), Postives = 385/391 (98.47%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISS------SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISS      SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDW+KTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRG+VYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 386
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh04G006250 vs. TrEMBL
Match: A0A0A0KVC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 1.1e-197
Identity = 351/380 (92.37%), Postives = 360/380 (94.74%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRIS-SSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60
           MSGVNANSLL P PRI  SS   G KRLS FS GVLASSAAVANPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRE-PKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180
           ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300

Query: 301 SFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360
            FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

Query: 361 GKAKKLLSLPIAFGKAVVAP 380
           GKAKKLLSLPIAFG+A+V P
Sbjct: 361 GKAKKLLSLPIAFGRAMVGP 379

[Close]
BLAST of CmaCh04G006250 vs. TrEMBL
Match: T1RK41_CUCME (Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 8.0e-196
Identity = 347/380 (91.32%), Postives = 358/380 (94.21%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRIS-SSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60
           MSGVNANSLL P PRI  SS   G KRLS FS G LASSAAVANPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRE-PKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180
           ERR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEGMRLDLRKSRYE+FDELYLYCYYVAGTVGLMSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300

Query: 301 SFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360
            FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

Query: 361 GKAKKLLSLPIAFGKAVVAP 380
           GKAKKLLSLPIAFG+A+  P
Sbjct: 361 GKAKKLLSLPIAFGRAMAGP 379

[Close]
BLAST of CmaCh04G006250 vs. TrEMBL
Match: C5I849_FRAAN (Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.3e-177
Identity = 314/377 (83.29%), Postives = 347/377 (92.04%), Query Frame = 1 

Query: 5   NANSLLSPMPRISS-SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQAALV 64
           NA SLLS MPRI S  RS  C RLS FS G++A S AVA+P RSSEERVYEVVLKQAALV
Sbjct: 14  NATSLLSLMPRIGSPKRSKFCSRLS-FSPGIIAYSGAVAHPPRSSEERVYEVVLKQAALV 73

Query: 65  RELPKRDGETALDWDKTIQ-NEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERR 124
           RE  +R  E ALD+D+ I+ ++G+++ +LL+EAY RCGEVCAEYAKTFYLGT LMTPERR
Sbjct: 74  RE-QRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERR 133

Query: 125 RAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKY 184
           RAVWAIYVWCRRTDELVDGPNAS+ITPKAL+RWEKRLTDLFEGR YDMYDAALSDTV+KY
Sbjct: 134 RAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSDTVTKY 193

Query: 185 PVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVES 244
           PVDIQPFKDM+EGMRLDLRKSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APESKAS ES
Sbjct: 194 PVDIQPFKDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTES 253

Query: 245 VYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFM 304
           VYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELAQAGL DDDIFRGKVT+KW+SFM
Sbjct: 254 VYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGKVTDKWQSFM 313

Query: 305 KGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKA 364
           KGQIKRARMFFDEAEKG+ ELN ASRWPVWASL+LY+QILD+IEAN YDNFTKRAYVGKA
Sbjct: 314 KGQIKRARMFFDEAEKGVAELNSASRWPVWASLLLYRQILDAIEANGYDNFTKRAYVGKA 373

Query: 365 KKLLSLPIAFGKAVVAP 380
           KKL+SLPIA+G+A++ P
Sbjct: 374 KKLVSLPIAYGRAIIGP 388

[Close]
BLAST of CmaCh04G006250 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-148
Identity = 261/371 (70.35%), Postives = 305/371 (82.21%), Query Frame = 1 

Query: 35  LASSAAVANPSR----SSEERVYEVVLKQAALVRELPKRDGETALDWDKTIQNEGISDGN 94
           + SS+ VA+PS     SSEE+VY VVLKQAALV    K+   ++ D D     + +  G+
Sbjct: 68  VVSSSLVASPSGEIALSSEEKVYNVVLKQAALVN---KQLRSSSYDLDVKKPQDVVLPGS 127

Query: 95  L--LDEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYV---------------WCR 154
           L  L EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYV               WCR
Sbjct: 128 LSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCR 187

Query: 155 RTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQPFKDMI 214
           RTDELVDGPNASHITP AL+RWE RL DLF GR +DM DAAL+DTV++YPVDIQPF+DMI
Sbjct: 188 RTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMI 247

Query: 215 EGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLA 274
           EGMR+DL+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+A
Sbjct: 248 EGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIA 307

Query: 275 NQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFF 334
           NQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRARMFF
Sbjct: 308 NQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFF 367

Query: 335 DEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFG 385
           DEAEKG+ EL+ ASRWPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +LP+A+ 
Sbjct: 368 DEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYA 427

[Close]
BLAST of CmaCh04G006250 vs. NCBI nr
Match: gi|524852994|gb|AFV33363.1| (phytoene synthase [Cucurbita pepo])

HSP 1 Score: 768.1 bits (1982), Expect = 7.4e-219
Identity = 384/391 (98.21%), Postives = 384/391 (98.21%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISS------SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISS      SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELN ASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 386
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh04G006250 vs. NCBI nr
Match: gi|524852996|gb|AFV33364.1| (phytoene synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 767.7 bits (1981), Expect = 9.7e-219
Identity = 383/391 (97.95%), Postives = 385/391 (98.47%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRISS------SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60
           MSGVNANSLLSPMPRISS      SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120
           VVLKQAALVRELPKRDGETALDW+KTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180
           QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA
Sbjct: 121 QLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAA 180

Query: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240
           LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP
Sbjct: 181 LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAP 240

Query: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 300
           ESKASVESVYNAALALGLANQLTNILRDVGEDARRG+VYLPQDELAQAGLCDDDIFRGKV
Sbjct: 241 ESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRGKV 300

Query: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360
           TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT
Sbjct: 301 TEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFT 360

Query: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 386
           KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW
Sbjct: 361 KRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh04G006250 vs. NCBI nr
Match: gi|449460028|ref|XP_004147748.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 697.2 bits (1798), Expect = 1.6e-197
Identity = 351/380 (92.37%), Postives = 360/380 (94.74%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRIS-SSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60
           MSGVNANSLL P PRI  SS   G KRLS FS GVLASSAAVANPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRE-PKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180
           ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300

Query: 301 SFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360
            FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

Query: 361 GKAKKLLSLPIAFGKAVVAP 380
           GKAKKLLSLPIAFG+A+V P
Sbjct: 361 GKAKKLLSLPIAFGRAMVGP 379

[Close]
BLAST of CmaCh04G006250 vs. NCBI nr
Match: gi|659101861|ref|XP_008451831.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 691.0 bits (1782), Expect = 1.2e-195
Identity = 347/380 (91.32%), Postives = 358/380 (94.21%), Query Frame = 1 

Query: 1   MSGVNANSLLSPMPRIS-SSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60
           MSGVNANSLL P PRI  SS   G KRLS FS G LASSAAVANPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRE-PKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180
           ERR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEGMRLDLRKSRYE+FDELYLYCYYVAGTVGLMSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300

Query: 301 SFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360
            FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

Query: 361 GKAKKLLSLPIAFGKAVVAP 380
           GKAKKLLSLPIAFG+A+  P
Sbjct: 361 GKAKKLLSLPIAFGRAMAGP 379

[Close]
BLAST of CmaCh04G006250 vs. NCBI nr
Match: gi|238836224|gb|ACR61392.1| (phytoene synthase protein [Fragaria x ananassa])

HSP 1 Score: 630.6 bits (1625), Expect = 1.8e-177
Identity = 314/377 (83.29%), Postives = 347/377 (92.04%), Query Frame = 1 

Query: 5   NANSLLSPMPRISS-SRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQAALV 64
           NA SLLS MPRI S  RS  C RLS FS G++A S AVA+P RSSEERVYEVVLKQAALV
Sbjct: 14  NATSLLSLMPRIGSPKRSKFCSRLS-FSPGIIAYSGAVAHPPRSSEERVYEVVLKQAALV 73

Query: 65  RELPKRDGETALDWDKTIQ-NEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTPERR 124
           RE  +R  E ALD+D+ I+ ++G+++ +LL+EAY RCGEVCAEYAKTFYLGT LMTPERR
Sbjct: 74  RE-QRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERR 133

Query: 125 RAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTVSKY 184
           RAVWAIYVWCRRTDELVDGPNAS+ITPKAL+RWEKRLTDLFEGR YDMYDAALSDTV+KY
Sbjct: 134 RAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSDTVTKY 193

Query: 185 PVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVES 244
           PVDIQPFKDM+EGMRLDLRKSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APESKAS ES
Sbjct: 194 PVDIQPFKDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTES 253

Query: 245 VYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFM 304
           VYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELAQAGL DDDIFRGKVT+KW+SFM
Sbjct: 254 VYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGKVTDKWQSFM 313

Query: 305 KGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKA 364
           KGQIKRARMFFDEAEKG+ ELN ASRWPVWASL+LY+QILD+IEAN YDNFTKRAYVGKA
Sbjct: 314 KGQIKRARMFFDEAEKGVAELNSASRWPVWASLLLYRQILDAIEANGYDNFTKRAYVGKA 373

Query: 365 KKLLSLPIAFGKAVVAP 380
           KKL+SLPIA+G+A++ P
Sbjct: 374 KKLVSLPIAYGRAIIGP 388

The following BLAST results are available for this feature:
BLAST of CmaCh04G006250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSY_DAUCA3.2e-16176.57Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1[more]
PSY_CUCME5.1e-15174.72Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1[more]
PSY_ARATH2.5e-15073.31Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2[more]
PSY_NARPS3.6e-14972.93Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1[more]
PSY_ONCHC4.0e-14872.29Phytoene synthase, chloroplastic OS=Oncidium hybrid cultivar GN=PSY PE=2 SV=1[more]
BLAST of CmaCh04G006250 vs. TrEMBL
Match NameE-valueIdentityDescription
U3L2Q6_CUCPE5.2e-21998.21Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1[more]
U3L2P5_CUCPE6.8e-21997.95Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1[more]
A0A0A0KVC2_CUCSA1.1e-19792.37Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1[more]
T1RK41_CUCME8.0e-19691.32Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1[more]
C5I849_FRAAN1.3e-17783.29Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1[more]
BLAST of CmaCh04G006250 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17230.31.5e-14870.35 PHYTOENE SYNTHASE[more]
BLAST of CmaCh04G006250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|524852994|gb|AFV33363.1|7.4e-21998.21phytoene synthase [Cucurbita pepo][more]
gi|524852996|gb|AFV33364.1|9.7e-21997.95phytoene synthase [Cucurbita pepo subsp. pepo][more]
gi|449460028|ref|XP_004147748.1|1.6e-19792.37PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus][more]
gi|659101861|ref|XP_008451831.1|1.2e-19591.32PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo][more]
gi|238836224|gb|ACR61392.1|1.8e-17783.29phytoene synthase protein [Fragaria x ananassa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002060Squ/phyt_synthse
IPR008949Isoprenoid_synthase_dom_sf
IPR019845Squalene/phytoene_synthase_CS
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0006696 ergosterol biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0051996 squalene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G006250.1CmaCh04G006250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 106..361
score: 1.7
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 92..378
score: 7.7E
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 95..377
score: 2.41
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 214..229
scor
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 250..275
scor
NoneNo IPR availablePANTHERPTHR31480FAMILY NOT NAMEDcoord: 7..380
score: 1.4E
NoneNo IPR availablePANTHERPTHR31480:SF4SUBFAMILY NOT NAMEDcoord: 7..380
score: 1.4E