CmaCh16G004720 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G004720
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhytoene synthase 3
LocationCma_Chr16 : 2390509 .. 2394475 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATCCTCCCATGTGTGATCTTTAAGGATGAGAGAGAGGGCATATTCCCTCCCACACTCTGGCTTTCAAGGGGAGTGAGTGCTTTTTGAACCCCCAATTGTGAAGTTTTTGATTCCTTGTTCTTCCTTCAATCCAAAATGGTCCAAAAATTGATTGTCACCCATTTACCCTCCTCTTTCTCTCGCTGAATCCACCAAATAAAGGTGCGGGGAGGGGAGAAGAAGCAGGGCCGAGGGGGGTTTGTGGGTGGTTGTGAAGAAGATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAGGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGCTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATAGAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGCTGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGTAAACTTCCTCCCCTAAGCTACTGTTTCATTTCTGGGTTGAATGATCTTGTTTTTGTCATCCTGTTGGTCTTCTTTGAGATTTAGGTAGAAAATGGAACTGTTAATGACAGTCTTGGAATGTTTTGTACTAGAATATGAGATCCACATTGGGGGAACGAAGCATTCCTTTGTAAGAGTGTGGAGTGGAATGAAGTATCTCTTTGTAAGAGTGTTGAAACCTCTCCCTAATAGACGTGTTTTAAAACCATGAAGAGAAAACAATATCTGCTAGTGGTGGACTTGGACGGTTACGAATAGTATTAGAGTCAGACATTGAGCAGTGTGCCATCGAGGACGCTGGGCCTTAAGGAGGTGGATTATGAGTTCCTACATTGGTTGGAGAGGGGAACGAAACATCCCTTTATAAGAGTGTGAAAATCTCTCACTGATAGATGCGTTTTAAAACCATGAGGCTGACAGCGAGTCAAAGCAGACAATATCTGCTAGCAGTGGGCTTGGACTATTACAAATGGTATCAGAGGCAGACACCAGGCGGTGTGCCAACGAGGACGCTCGGCCTCAAAGGGGTGGGTTGTGAGATCTCACATTGGTTAGAGAGGGGAACGAAGCATCCATTATGAGGGTGTAGAAACCTCTCCCTAATAAACACGTTTTAAAACCGTGAGGCTAATAGCAATACGAGCCAAAGCAGACAATATTTGCTAGTAGTGGGTTGGGTTGTTACAAATGGTATCAGAGCTAGACACCGAGCGGTGTGCCAACGAGGACGTTGGGCCTGAATGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGAACGAAGCATCCTTTTATAAGTGCGTGGAAATTTCTCCTTTGTAGACGCATTTTAAAACCGTGAATCTGACGGTGATATAGGCTAAAGAGGATAATATCTGCTAGCGGTGGGCTTGGACTGTTACATGATACCTTTCTGAGTTCGGTTGAAACCATTTAGCCTTTTCTCTTTTTCCCCTTGGTCGTTCATGATTGAGTCACTTTCTTGCTATTCTCAGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGGTATCTGTCATTCTCTTCCTCCAGCTTGTTATCTTTTGTCTACTGCAATTTTTGTTCACTTCTGTAGACCAAGTTGCTTGTAGGACATGGCTGTGGACAGACAAAGAATTGCTCCAAGTTGTAGCCATGTTCTCCTAGTAGTTTCTATTGATGACCCTCACAACGTGAACGTTTATGGATCTTTTACGAACTTTTTAAAGTTTAAGAACCGAATAGACACAAGTTAAAAGTTTCGGAACTTATAAGACAACCTTTTCTAATAGATGGTCTTAGGAGACACGATCCCAAAAGGGGAAAATCATTATCGAGGACCTAAGTTCTCGATCTGAAAATTTGAACCCAAGTTTGAAGGGTATCTAAAAACATCCTCAAGGTTGATTCTTAATCACTTCATTTGCAGTCCTGTTACTTCAGTTTTGGACATTCAAGAGGGTAACTCTTTGTAATGCAGTGTGGTGCAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACAGTCTCAAAATACTTCGTCGACATTCAGGTAAACTTGATTTAAAGCCGGTTTGAAATGACTTTCTAAGTGCTTAAGAATTTATTGGTCTGCACTTAAAATACGTTCATTTGTGATATGAGAAGTTTAGGCTGCCATGACAAAGGTCTTGTGAAACTTATGAAGAAATGAATGTTTTTGTCGGTACAAGAACAACAGAGAGCTTTTATCATTAAAATTTGATCATCCTAGTTAAATGAGACTTAGCTCTTCTTTGCTCTAATTTGAATTGGCAGTGCACGAGTTTGTTTAATGTAATCAAAAGCGTCCGATTTAAAACGAGCGACAATGATTAAACTACTCTCATCTTCGAGTAAAGGAGGTCTGGATCCTTTTTTTCATTTCTAGTTCCATTTGTGTGTTTTTTGATTCACTTGGCTTGAAACTATGCACGTTATGTTTCAACAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACATGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGTGTCTACAATGCAGCATTGGCTCTCGGACTTGCCAATCAGCTCACAAACATTCTCAGAGACGTCGGAGAAGAGTAAGCTTTCTTCCACCACCTTCTCACAACAGCTAAAGTGTAACGACCCAAGCCCACTGTTAGCAGATATTGTCCTCTTTAGGCTTCCCTTCTATCTTCTAGGGAGAGGATTTCACACTCTTATAAATAATGTTTCATTTACTTCTCCAACCGACGTGGAATCTTACATAAAGTTATAATACTTTTCGTGTTTACTTTTTCAATAGTGCTCGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCGAAGGGAAAGTGACGGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCCAAAGGGCATATGTAAGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGGGCCCTTCAAACTCAAAGATTTGGTAACAAAATAGATTTTTTTTTTCCATTATGTATGCATGTATATAGGCAGGGTGAGGGACGGGGAATATAATTTCCGTCTCCAACTTGGTTTAGCTATGGAAAAATCTCTCCTTAATCCCTCTCTCATTCCCGATTTAAGTGGGGACTCTTCACCTAGTTCGAGGCAGGGCGCTAGTCTCGAAAAGTAATATTAACATTCTTTGTGTACCATATTCCCAAAAATAGAAAATTCCATTGGATCCACTAGAAAAGTGCCCAATTTCTTTTTCCTAGAAACTAATAAGTTAGAATTATTTTACAGGCCAAGAACAGCAAGGAAATCTCGTCCTATAATACAGAGAAGACATTCCTATAATATAAATATTCTTCCACAGGAAAATTCTATGCAACGTTCAACTGTATGTTACCTACAAAAATATAGCACAACTCTGA

mRNA sequence

CAATCCTCCCATGTGTGATCTTTAAGGATGAGAGAGAGGGCATATTCCCTCCCACACTCTGGCTTTCAAGGGGAGTGAGTGCTTTTTGAACCCCCAATTGTGAAGTTTTTGATTCCTTGTTCTTCCTTCAATCCAAAATGGTCCAAAAATTGATTGTCACCCATTTACCCTCCTCTTTCTCTCGCTGAATCCACCAAATAAAGGTGCGGGGAGGGGAGAAGAAGCAGGGCCGAGGGGGGTTTGTGGGTGGTTGTGAAGAAGATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAGGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGCTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATAGAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGCTGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGTGTGGTGCAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACAGTCTCAAAATACTTCGTCGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACATGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGTGTCTACAATGCAGCATTGGCTCTCGGACTTGCCAATCAGCTCACAAACATTCTCAGAGACGTCGGAGAAGATGCTCGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCGAAGGGAAAGTGACGGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCCAAAGGGCATATGTAAGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGGGCCCTTCAAACTCAAAGATTTGGAAAATTCTATGCAACGTTCAACTGTATGTTACCTACAAAAATATAGCACAACTCTGA

Coding sequence (CDS)

ATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAGGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGCTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATAGAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGCTGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGTGTGGTGCAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACAGTCTCAAAATACTTCGTCGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACATGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGTGTCTACAATGCAGCATTGGCTCTCGGACTTGCCAATCAGCTCACAAACATTCTCAGAGACGTCGGAGAAGATGCTCGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCGAAGGGAAAGTGACGGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCCAAAGGGCATATGTAAGCAAAGCAAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGGGCCCTTCAAACTCAAAGATTTGGAAAATTCTATGCAACGTTCAACTGTATGTTACCTACAAAAATATAGCACAACTCTGA

Protein sequence

MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQAALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIWKILCNVQLYVTYKNIAQL
Homology
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BLAST of CmaCh16G004720 vs. Swiss-Prot
Match: PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 1.5e-158
Identity = 277/354 (78.25%), Postives = 310/354 (87.57%), Query Frame = 1 

Query: 37  GSSAVVANPSRSAEERVYEVVLKQAALVREP-RKDRERGLDWEKT-------IENEGSIS 96
           G SAV ANP R++EERVYEVVLKQAALVRE  R  R   LD ++T        EN+ +  
Sbjct: 42  GVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTGSKSFDKSENDDAGM 101

Query: 97  DDGNLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASH 156
              NLLNEAY RCGEVCAEYAKTFYLGT LMTPERRRAVWAIYVWCRRTDELVDGPNASH
Sbjct: 102 KSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASH 161

Query: 157 ITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYE 216
           ITPKAL RWE RL DLF+G+PYDMYDAAL+DTVS Y VDIQPFKDMI+GMR+D++KSRY+
Sbjct: 162 ITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDMIDGMRMDLKKSRYQ 221

Query: 217 NFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGED 276
            FDELYLYCYYVAGTVGLMSVPVMG+APESKA+ ESVY+AALALG+ANQLTNILRDVGED
Sbjct: 222 TFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGED 281

Query: 277 ARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAA 336
           ARRGR+YLPQ+EL  AG+  + IF+GKVT+KWRSFMKGQIKRAR FFDEAEKG+AELS+A
Sbjct: 282 ARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSA 341

Query: 337 SRWPVWASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRAMMGPS 383
           SRWPVWASL+LYKQILD+IEANDYDNFT+RAYV KAKKL+SLP+A+ RA+  PS
Sbjct: 342 SRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSLPLAYSRALFAPS 395

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BLAST of CmaCh16G004720 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.8e-151
Identity = 266/350 (76.00%), Postives = 309/350 (88.29%), Query Frame = 1 

Query: 39  SAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERG-LDWEKTIENEGSISDDGNL 98
           +++VANP+     SAE++VY VV+KQAALV+  R+ R  G LD +  I   G++S    L
Sbjct: 79  ASMVANPAGEIAVSAEQKVYNVVMKQAALVK--RQLRTAGELDVKPDIVLPGTLS----L 138

Query: 99  LNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKA 158
           LNEAY RCGEVCAEYAKTFYLGT LMTPER++A+WAIYVWCRRTDELVDGPNASHITP A
Sbjct: 139 LNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTA 198

Query: 159 LARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDEL 218
           L RWE RL +LF+GRP+DM DAAL+DTV+K+ VDIQPFKDMIEGMR+D+RKSRY+NFDEL
Sbjct: 199 LDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDEL 258

Query: 219 YLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQL-TNILRDVGEDARRG 278
           YLYCYYVAGTVGLMSVPVMG+APES+AS ESVYNAALALG+ANQ   NILRDVGEDARRG
Sbjct: 259 YLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDARRG 318

Query: 279 RVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWP 338
           R+YLPQDELAQAGL D+DIF G+VT+KWR+FMK QIKRAR FFDEAEKG+ EL+ ASRWP
Sbjct: 319 RIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASRWP 378

Query: 339 VWASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRAMMGPS 383
           VWASL+LY+QILD IEANDYDNFT+RAYVSKAKK+L+LP+A+GRA++GPS
Sbjct: 379 VWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGPS 422

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BLAST of CmaCh16G004720 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 2.2e-149
Identity = 255/347 (73.49%), Postives = 300/347 (86.46%), Query Frame = 1 

Query: 39  SAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERGLDWEKTIENEGSISDDGNLL 98
           S++VANP+     S+E++VY+VVLKQAALV++  K   +  D +  I   G++     LL
Sbjct: 70  SSLVANPAGEATISSEQKVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTVY----LL 129

Query: 99  NEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL 158
            +AY RCGEVCAEYAKTFYLGT LMTPERRRA+WAIYVWCRRTDELVDG NASHITP AL
Sbjct: 130 KDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSAL 189

Query: 159 ARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELY 218
            RWE RL DLF GRPYDM+DAALSDTVS++ VDIQPF DM+EGMR+D++KSRY+NFDELY
Sbjct: 190 DRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDELY 249

Query: 219 LYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRV 278
           LYCYYVAGTVGLMSVPVMG+APES A  ESVYNAALALG+ANQLTNILRDVGEDARRGR+
Sbjct: 250 LYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDARRGRI 309

Query: 279 YLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVW 338
           YLPQDELA+AGL D+D+F GKVT+KWRSFMK QIKRAR FF++AEKG+ ELS ASRWPVW
Sbjct: 310 YLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWPVW 369

Query: 339 ASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRAMMGP 382
           ASL+LY+QILD IEANDY+NFT+RAYVSK K+L +LP+A+G++++ P
Sbjct: 370 ASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]
BLAST of CmaCh16G004720 vs. Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2)

HSP 1 Score: 530.0 bits (1364), Expect = 2.2e-149
Identity = 259/355 (72.96%), Postives = 306/355 (86.20%), Query Frame = 1 

Query: 38  SSAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERGLDWEKT--IENEGSISDDG 97
           SS++VA+PS     S+EE+VY VVLKQAALV +  +     LD +K   +   GS+S   
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS--- 129

Query: 98  NLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 157
            LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGPNASHITP
Sbjct: 130 -LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 189

Query: 158 KALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFD 217
            AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQPF+DMIEGMR+D++KSRY+NFD
Sbjct: 190 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFD 249

Query: 218 ELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARR 277
           +LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNILRDVGEDARR
Sbjct: 250 DLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARR 309

Query: 278 GRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRW 337
           GRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRAR FFDEAEKG+ ELSAASRW
Sbjct: 310 GRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRW 369

Query: 338 PVWASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKI 387
           PVWASL+LY++ILD IEANDY+NFT+RAYV K KK+ +LP+A+ ++++  S+S++
Sbjct: 370 PVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSSSRL 420

[Close]
BLAST of CmaCh16G004720 vs. Swiss-Prot
Match: PSY_CAPAN (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 PE=1 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.1e-147
Identity = 257/345 (74.49%), Postives = 299/345 (86.67%), Query Frame = 1 

Query: 39  SAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLDWEKTIENEGSISDDGNLL 98
           SA+VA P+     S+E  VY+VVL+QAALV+   +  +  LD +K I   G++     LL
Sbjct: 75  SAIVATPAGEMTMSSERMVYDVVLRQAALVKRQLRSTDE-LDVKKDIPIPGTLG----LL 134

Query: 99  NEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL 158
           +EAY RC EVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGPNASHITP AL
Sbjct: 135 SEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPAAL 194

Query: 159 ARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELY 218
            RWE RL D+F GRP+DM DAALSDTVSK+ VDIQPF+DMIEGMR+D+RKSRY NFDELY
Sbjct: 195 DRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDELY 254

Query: 219 LYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRV 278
           LYCYYVAGTVGLMSVP+MG+APESKA+ ESVYNAALALG+ANQLTNILRDVGEDARRGRV
Sbjct: 255 LYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRV 314

Query: 279 YLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVW 338
           YLPQDELAQAGL D+DIF G+VT+KWR FMK QI+RAR+FFDEAEKG+ ELSAASRWPV 
Sbjct: 315 YLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSAASRWPVL 374

Query: 339 ASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRAMM 380
           ASL+LY++ILD IEANDY+NFT+RAYVSK KKL++LPIA+ ++++
Sbjct: 375 ASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAKSLV 414

[Close]
BLAST of CmaCh16G004720 vs. TrEMBL
Match: A0A0A0KVC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 8.2e-199
Identity = 347/385 (90.13%), Postives = 360/385 (93.51%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  GV  SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREP++D +R LDWEKTI+NEG    DGNLL+EAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGIT--DGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240
           VSKY VDIQPFKDMIEGMR+D+RKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA
Sbjct: 181 VSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300
           SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAY 360
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFT+RAY
Sbjct: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

Query: 361 VSKAKKLLSLPIAFGRAMMGPSNSK 386
           V KAKKLLSLPIAFGRAM+GPSN K
Sbjct: 361 VGKAKKLLSLPIAFGRAMVGPSNLK 383

[Close]
BLAST of CmaCh16G004720 vs. TrEMBL
Match: T1RK41_CUCME (Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 2.6e-197
Identity = 344/385 (89.35%), Postives = 359/385 (93.25%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  G   SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREP++D +R LDWEKTI+NEG   +DGNLL+EAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGI--NDGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERR+AVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240
           VSKY VDIQPFKDMIEGMR+D+RKSRYE+FDELYLYCYYVAGTVGLMSVPVMGLAPESKA
Sbjct: 181 VSKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300
           SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAY 360
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFT+RAY
Sbjct: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

Query: 361 VSKAKKLLSLPIAFGRAMMGPSNSK 386
           V KAKKLLSLPIAFGRAM GPSN K
Sbjct: 361 VGKAKKLLSLPIAFGRAMAGPSNLK 383

[Close]
BLAST of CmaCh16G004720 vs. TrEMBL
Match: U3L2Q6_CUCPE (Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 6.3e-191
Identity = 339/393 (86.26%), Postives = 355/393 (90.33%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGC-----RPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYE 60
           MSGVNAN+LLSP PRI         R  GCKRLS F  GV  SSA VANPSRS+EERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYL 120
           VVLKQAALVRE P++D E  LDW+KTI+NEG    DGNLL+EAY+RCGEVCAEYAKTFYL
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGI--SDGNLLDEAYSRCGEVCAEYAKTFYL 120

Query: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYD 180
           GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGR YDMYD
Sbjct: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYD 180

Query: 181 AALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240
           AALSDTVSKY VDIQPFKDMIEGMR+D+RKSRYENFDELYLYCYYVAGTVGLMSVPVMGL
Sbjct: 181 AALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240

Query: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEG 300
           APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF G
Sbjct: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRG 300

Query: 301 KVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDN 360
           KVTEKWRSFMKGQIKRAR FFDEAEKGI EL+ ASRWPVWASLMLYKQILDSIEANDYDN
Sbjct: 301 KVTEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDN 360

Query: 361 FTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIW 388
           FT+RAYV KAKKLLSLPIAFG+A++ P  SK+W
Sbjct: 361 FTKRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh16G004720 vs. TrEMBL
Match: U3L2P5_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 3.1e-190
Identity = 338/393 (86.01%), Postives = 354/393 (90.08%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGC-----RPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYE 60
           MSGVNAN+LLSP PRI         R  GCKRLS F  GV  SSA VANPSRS+EERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYL 120
           VVLKQAALVRE P++D E  LDW KTI+NEG    DGNLL+EAY+RCGEVCAEYAKTFYL
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGI--SDGNLLDEAYSRCGEVCAEYAKTFYL 120

Query: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYD 180
           GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGR YDMYD
Sbjct: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYD 180

Query: 181 AALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240
           AALSDTVSKY VDIQPFKDMIEGMR+D+RKSRYENFDELYLYCYYVAGTVGLMSVPVMGL
Sbjct: 181 AALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240

Query: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEG 300
           APESKASVESVYNAALALGLANQLTNILRDVGEDARRG+VYLPQDELAQAGLCDDDIF G
Sbjct: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRG 300

Query: 301 KVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDN 360
           KVTEKWRSFMKGQIKRAR FFDEAEKGI EL+ ASRWPVWASLMLYKQILDSIEANDYDN
Sbjct: 301 KVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDN 360

Query: 361 FTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIW 388
           FT+RAYV KAKKLLSLPIAFG+A++ P  SK+W
Sbjct: 361 FTKRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh16G004720 vs. TrEMBL
Match: C5I849_FRAAN (Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 2.5e-171
Identity = 301/378 (79.63%), Postives = 337/378 (89.15%), Query Frame = 1 

Query: 5   NANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQAALV 64
           NA +LLS  PRI    R   C RLS F  G+   S  VA+P RS+EERVYEVVLKQAALV
Sbjct: 14  NATSLLSLMPRIGSPKRSKFCSRLS-FSPGIIAYSGAVAHPPRSSEERVYEVVLKQAALV 73

Query: 65  REPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMTPERR 124
           RE R+ +E+ LD+++ IE    +++  +LLNEAY RCGEVCAEYAKTFYLGT LMTPERR
Sbjct: 74  REQRRPKEKALDFDQRIEGSDGMTN-WDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERR 133

Query: 125 RAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKY 184
           RAVWAIYVWCRRTDELVDGPNAS+ITPKAL RWE RLTDLFEGRPYDMYDAALSDTV+KY
Sbjct: 134 RAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSDTVTKY 193

Query: 185 FVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVES 244
            VDIQPFKDM+EGMR+D+RKSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APESKAS ES
Sbjct: 194 PVDIQPFKDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTES 253

Query: 245 VYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFM 304
           VYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELAQAGL DDDIF GKVT+KW+SFM
Sbjct: 254 VYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGKVTDKWQSFM 313

Query: 305 KGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAYVSKA 364
           KGQIKRAR FFDEAEKG+AEL++ASRWPVWASL+LY+QILD+IEAN YDNFT+RAYV KA
Sbjct: 314 KGQIKRARMFFDEAEKGVAELNSASRWPVWASLLLYRQILDAIEANGYDNFTKRAYVGKA 373

Query: 365 KKLLSLPIAFGRAMMGPS 383
           KKL+SLPIA+GRA++GPS
Sbjct: 374 KKLVSLPIAYGRAIIGPS 389

[Close]
BLAST of CmaCh16G004720 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-147
Identity = 259/370 (70.00%), Postives = 306/370 (82.70%), Query Frame = 1 

Query: 38  SSAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERGLDWEKT--IENEGSISDDG 97
           SS++VA+PS     S+EE+VY VVLKQAALV +  +     LD +K   +   GS+S   
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS--- 129

Query: 98  NLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYV---------------WCRR 157
            LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYV               WCRR
Sbjct: 130 -LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 189

Query: 158 TDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIE 217
           TDELVDGPNASHITP AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQPF+DMIE
Sbjct: 190 TDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIE 249

Query: 218 GMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLAN 277
           GMR+D++KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+AN
Sbjct: 250 GMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIAN 309

Query: 278 QLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFD 337
           QLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRAR FFD
Sbjct: 310 QLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFD 369

Query: 338 EAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGR 387
           EAEKG+ ELSAASRWPVWASL+LY++ILD IEANDY+NFT+RAYV K KK+ +LP+A+ +
Sbjct: 370 EAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 429

[Close]
BLAST of CmaCh16G004720 vs. NCBI nr
Match: gi|449460028|ref|XP_004147748.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 701.0 bits (1808), Expect = 1.2e-198
Identity = 347/385 (90.13%), Postives = 360/385 (93.51%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  GV  SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREP++D +R LDWEKTI+NEG    DGNLL+EAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGIT--DGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240
           VSKY VDIQPFKDMIEGMR+D+RKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA
Sbjct: 181 VSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300
           SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAY 360
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFT+RAY
Sbjct: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

Query: 361 VSKAKKLLSLPIAFGRAMMGPSNSK 386
           V KAKKLLSLPIAFGRAM+GPSN K
Sbjct: 361 VGKAKKLLSLPIAFGRAMVGPSNLK 383

[Close]
BLAST of CmaCh16G004720 vs. NCBI nr
Match: gi|659101861|ref|XP_008451831.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 696.0 bits (1795), Expect = 3.8e-197
Identity = 344/385 (89.35%), Postives = 359/385 (93.25%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  G   SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREP++D +R LDWEKTI+NEG   +DGNLL+EAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGI--NDGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERR+AVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240
           VSKY VDIQPFKDMIEGMR+D+RKSRYE+FDELYLYCYYVAGTVGLMSVPVMGLAPESKA
Sbjct: 181 VSKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300
           SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAY 360
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFT+RAY
Sbjct: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

Query: 361 VSKAKKLLSLPIAFGRAMMGPSNSK 386
           V KAKKLLSLPIAFGRAM GPSN K
Sbjct: 361 VGKAKKLLSLPIAFGRAMAGPSNLK 383

[Close]
BLAST of CmaCh16G004720 vs. NCBI nr
Match: gi|524852994|gb|AFV33363.1| (phytoene synthase [Cucurbita pepo])

HSP 1 Score: 674.9 bits (1740), Expect = 9.0e-191
Identity = 339/393 (86.26%), Postives = 355/393 (90.33%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGC-----RPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYE 60
           MSGVNAN+LLSP PRI         R  GCKRLS F  GV  SSA VANPSRS+EERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYL 120
           VVLKQAALVRE P++D E  LDW+KTI+NEG    DGNLL+EAY+RCGEVCAEYAKTFYL
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGI--SDGNLLDEAYSRCGEVCAEYAKTFYL 120

Query: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYD 180
           GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGR YDMYD
Sbjct: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYD 180

Query: 181 AALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240
           AALSDTVSKY VDIQPFKDMIEGMR+D+RKSRYENFDELYLYCYYVAGTVGLMSVPVMGL
Sbjct: 181 AALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240

Query: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEG 300
           APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF G
Sbjct: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRG 300

Query: 301 KVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDN 360
           KVTEKWRSFMKGQIKRAR FFDEAEKGI EL+ ASRWPVWASLMLYKQILDSIEANDYDN
Sbjct: 301 KVTEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDN 360

Query: 361 FTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIW 388
           FT+RAYV KAKKLLSLPIAFG+A++ P  SK+W
Sbjct: 361 FTKRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh16G004720 vs. NCBI nr
Match: gi|524852996|gb|AFV33364.1| (phytoene synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 672.5 bits (1734), Expect = 4.5e-190
Identity = 338/393 (86.01%), Postives = 354/393 (90.08%), Query Frame = 1 

Query: 1   MSGVNANALLSPKPRIRIGC-----RPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYE 60
           MSGVNAN+LLSP PRI         R  GCKRLS F  GV  SSA VANPSRS+EERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYL 120
           VVLKQAALVRE P++D E  LDW KTI+NEG    DGNLL+EAY+RCGEVCAEYAKTFYL
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGI--SDGNLLDEAYSRCGEVCAEYAKTFYL 120

Query: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYD 180
           GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGR YDMYD
Sbjct: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYD 180

Query: 181 AALSDTVSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240
           AALSDTVSKY VDIQPFKDMIEGMR+D+RKSRYENFDELYLYCYYVAGTVGLMSVPVMGL
Sbjct: 181 AALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240

Query: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEG 300
           APESKASVESVYNAALALGLANQLTNILRDVGEDARRG+VYLPQDELAQAGLCDDDIF G
Sbjct: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRG 300

Query: 301 KVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDN 360
           KVTEKWRSFMKGQIKRAR FFDEAEKGI EL+ ASRWPVWASLMLYKQILDSIEANDYDN
Sbjct: 301 KVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDN 360

Query: 361 FTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIW 388
           FT+RAYV KAKKLLSLPIAFG+A++ P  SK+W
Sbjct: 361 FTKRAYVGKAKKLLSLPIAFGKAVVAPQISKMW 391

[Close]
BLAST of CmaCh16G004720 vs. NCBI nr
Match: gi|238836224|gb|ACR61392.1| (phytoene synthase protein [Fragaria x ananassa])

HSP 1 Score: 609.8 bits (1571), Expect = 3.6e-171
Identity = 301/378 (79.63%), Postives = 337/378 (89.15%), Query Frame = 1 

Query: 5   NANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQAALV 64
           NA +LLS  PRI    R   C RLS F  G+   S  VA+P RS+EERVYEVVLKQAALV
Sbjct: 14  NATSLLSLMPRIGSPKRSKFCSRLS-FSPGIIAYSGAVAHPPRSSEERVYEVVLKQAALV 73

Query: 65  REPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMTPERR 124
           RE R+ +E+ LD+++ IE    +++  +LLNEAY RCGEVCAEYAKTFYLGT LMTPERR
Sbjct: 74  REQRRPKEKALDFDQRIEGSDGMTN-WDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERR 133

Query: 125 RAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKY 184
           RAVWAIYVWCRRTDELVDGPNAS+ITPKAL RWE RLTDLFEGRPYDMYDAALSDTV+KY
Sbjct: 134 RAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDAALSDTVTKY 193

Query: 185 FVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVES 244
            VDIQPFKDM+EGMR+D+RKSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APESKAS ES
Sbjct: 194 PVDIQPFKDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTES 253

Query: 245 VYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFM 304
           VYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELAQAGL DDDIF GKVT+KW+SFM
Sbjct: 254 VYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGKVTDKWQSFM 313

Query: 305 KGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAYVSKA 364
           KGQIKRAR FFDEAEKG+AEL++ASRWPVWASL+LY+QILD+IEAN YDNFT+RAYV KA
Sbjct: 314 KGQIKRARMFFDEAEKGVAELNSASRWPVWASLLLYRQILDAIEANGYDNFTKRAYVGKA 373

Query: 365 KKLLSLPIAFGRAMMGPS 383
           KKL+SLPIA+GRA++GPS
Sbjct: 374 KKLVSLPIAYGRAIIGPS 389

The following BLAST results are available for this feature:
BLAST of CmaCh16G004720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSY_DAUCA1.5e-15878.25Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1[more]
PSY_CUCME1.8e-15176.00Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1[more]
PSY_NARPS2.2e-14973.49Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1[more]
PSY_ARATH2.2e-14972.96Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2[more]
PSY_CAPAN2.1e-14774.49Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 ... [more]
BLAST of CmaCh16G004720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVC2_CUCSA8.2e-19990.13Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1[more]
T1RK41_CUCME2.6e-19789.35Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1[more]
U3L2Q6_CUCPE6.3e-19186.26Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1[more]
U3L2P5_CUCPE3.1e-19086.01Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1[more]
C5I849_FRAAN2.5e-17179.63Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1[more]
BLAST of CmaCh16G004720 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17230.31.3e-14770.00 PHYTOENE SYNTHASE[more]
BLAST of CmaCh16G004720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460028|ref|XP_004147748.1|1.2e-19890.13PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus][more]
gi|659101861|ref|XP_008451831.1|3.8e-19789.35PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo][more]
gi|524852994|gb|AFV33363.1|9.0e-19186.26phytoene synthase [Cucurbita pepo][more]
gi|524852996|gb|AFV33364.1|4.5e-19086.01phytoene synthase [Cucurbita pepo subsp. pepo][more]
gi|238836224|gb|ACR61392.1|3.6e-17179.63phytoene synthase protein [Fragaria x ananassa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002060Squ/phyt_synthse
IPR008949Isoprenoid_synthase_dom_sf
IPR019845Squalene/phytoene_synthase_CS
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0006696 ergosterol biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
molecular_function GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0051996 squalene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G004720.1CmaCh16G004720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 108..363
score: 1.1
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 94..379
score: 1.2E
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 97..378
score: 1.53
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 216..231
scor
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 252..277
scor
NoneNo IPR availablePANTHERPTHR31480FAMILY NOT NAMEDcoord: 38..391
score: 1.2E
NoneNo IPR availablePANTHERPTHR31480:SF4SUBFAMILY NOT NAMEDcoord: 38..391
score: 1.2E