Carg11395 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11395
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Phytoene synthase
Location	Cucurbita_argyrosperma_scaffold_025 : 739796 .. 743637 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAAGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGTTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATAGAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGATGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGTAAACTTTCCCTCCCTATGCTACTGTTTCATTTCTGGGTTGAATGATCTTGTTTTTGTCATCCTGTTAGTCTTCTTTGAGATTTAGGTAGAAAATGGAACTGATAATGACTGTCTTGGAATGTTTTCTACTAGAATATGAGATCCACATTGGGGAATGAAGCATCCCTTTGTAAGAGGAAGAGGGTGGAACCTCTCCCTAATAGACGTGTTTTAAAATCATGAAGAGTATGGACTTGGATTGTTACAAGTAGTATTAGAGTCAGACACCGAACGGTGTGCCATTGAGGACGTTGGGCCCTAAAGGGTTGTGAGTTCTTATATTGGTTGGAGAGGGGAACGAAGCATCCCTTTATAAGGGTGTGGAAACCTCTCACTGATAGATGTGTTCTAAAACCATGAGGCTGATGGCGATATGGGCCAAAGCGGACAATATTTGCTAGTGGTGGGCTTGGACTGTTACAAATGGTAACAGAGCCAGACACTGGGCGGCGTGCCATCGAGGACGCTGACCCCTAAGGGGGTGGATTGTGAGTTCCTACATTGGTTGGAGAGGAGAACGAAGCATCCCTTTATAAGGGTGTGGAAATCTGTTTTAAAACCATGAGGTTGACGGTGATACGAGCCAAAGCAGACAATATTTGCTAGCGGTGAGCTTGGACTGTTATAAAGGGTATTAGAGCTAGACACCGGGCGGTGTGTCAATGAGGACGCTAGGCCTCAAGGGGGTGGATTGTGAGACCCCACATTGATTAGAGAGGGGAGGGAAGCATCCCTTTATAAGGGTGTGGAAATCTCTCACTGATAGATGCGTTTTAAAACCATGAGGTTGACGGTGATACGGGCCAAAGCAGACAATATTTGCTAGCGGTGGGCTTGGACTGTTACAAAGGGTATTAGAGCTAGACACCAGGCGGTGTGCCAATGAAGACGCTAGGCCTCAAGGGGTGGATTGTGAGATCCCACATTGATTAGAGAGGGGAACGAAGCATCCATTTATAAGGACGTGGAAACCTCTCACTGATAGATGCGTTTTAAAACCATGAGGCTGACGGCGATAGGGGCCAAAGCAGACAATATCTGCTAGCGGTGAGCTTGGACTGTTACAAATGGTATCAGAGCCAGACATCGGGTGGTGCGCCAACGAGGACGCTGGGCCTCAAGGGGGTGGATTGTGAGATCCCACATTGGTTAGAGATGGGAACGAAGCATCCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACGCGTTTTAAAACCGTGAGGTTGATGGCAATATGAGGCAAAACAGACAATATTTGCTAGCGATAGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGAGTGGTGTGCCAGCGAGGATGCTGGGCCCGAATGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAAGGGAACGAAGCATCCTTTTATAAGTGCGTGGAAATTTCAGATGCATTTTAAAACCGTGAATCTGATTGTGATATAGGCTAAAACGGATAATATTTGCTAGCGGTGGGCTTGGACTGTTACATGATACCTTTCTGAGTTCGGTTCAAACCATTTGGCCTTTTCTCTTTTCCTCCTTGGTTGTTCACTTTCTTGCTATTCTCAGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGGTATCAGTCATTCTCTTCCTCCACCTTGTTATCTCTTTGTCTACTGCAATTTTTGTTCACTTCTGTAGACCAAGTTGCTTGTAGGACATGGCTGTGGACAGCCAAAGTATTGCTCCAAGTTCTAGCCATGTTCTCCGAGTAGTTTCTATTGATGACCCTCACATCATGAACGTTTATGGACCTGTTACAAACTTTTTAAAGTTTAAGAATCGAATAGACGCAACTTAAAAGTTTCGAAACTTGTAAGACAACCTTTTCAAATAGAGGGTCTTAGGAGACCGATCCTGAAAGGGGAAAATCATTATCGAACGGGACCTAAGTTCTCGATCTGAAAATTTGAACCCGTGTTTGAAGGGTATCTAAAAACATCCTCAAGGATGGGTCTTAATCACTACATTTGCAGTCCTGTTACTTCAGTTTTGGACATTCAAGAGGGTAACTCTTTGTAATGCAGTGTGGTGTAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTTTGATGCTGCTCTTTCTGATACAGTCTCAAAATACTTTGTCGACATTCAGGTAAACTTGATTTAGAGTTTGTTTGAAATGACTTTCTAAGTGCTTAAGAATTTGTTGTTTGCGCTTAAAATACTTAGCGGTTCGTTCGTTTGTGATATGAGAAGTTTAGGCTGCCATCACAAAGGTCTTGTGAAACTTATGAAGAAATTAATGTTTTTGTCAGTACAAGAACAACAGAGAGCTTTTATCAGTAAAATTTGATCATCCTAGTTTAATGAGACTTGGCTCTTCATTGCTCTAATTTGAATTGGCAGTGCACGAGTTTGTTTAATGTAATCAAAAGCGTACGATTTAAAACGAGCGACGATGATTTAACTACTCTCGTGTTCGAGTAAAGAAGGTCTGGATCCTTTTTTTCATTTCTAGTTCCATTTGTGTGTTTTTTTATTCACTTGGCTTGAAATTATGCACGTTATGTTTCGACAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACTTGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTTAGAGACGTCGGAGAAGAGTAAGTTTTCTTCCACCACCTTCTCATAACAGTGCAATGGCCCAAGTCTACTGCTAACAGATGTTGTCTTCTAGGGAGAGATTTTCACACCTTTGTAAAGAATGTTTTGTTTCCCTCTCCAATCGACGTGGAATCTTACATAAAGTTATATTACTTTTCGTGTTTACTTTTCCAACAGTGCTCGAAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCGAAGGGAAAGTGACAGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAAGCAAAGCCAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGAGCCCTTCAAACTCAAAGATTTGGTAA

mRNA sequence

ATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAAGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGTTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATAGAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGATGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGTGTGGTGTAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTTTGATGCTGCTCTTTCTGATACAGTCTCAAAATACTTTGTCGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACTTGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGGCTATGCGACGACGACATATTCGAAGGGAAAGTGACAGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAAGCAAAGCCAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGAGCCCTTCAAACTCAAAGATTTGGTAA

Coding sequence (CDS)

ATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAAGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGTTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATAGAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGATGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGTGTGGTGTAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTTTGATGCTGCTCTTTCTGATACAGTCTCAAAATACTTTGTCGACATTCAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACTTGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGGCTATGCGACGACGACATATTCGAAGGGAAAGTGACAGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAAGCAAAGCCAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGAGCCCTTCAAACTCAAAGATTTGGTAA

Protein sequence

MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQAALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMRLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW

Homology

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BLAST of Carg11395 vs. NCBI nr
Match: XP_022931537.1 (phytoene synthase 2, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 576.2 bits (1484), Expect = 6.5e-161
Identity = 294/370 (79.46%), Postives = 295/370 (79.73%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYLVWCRRT 120
           AALVREPRKDRERGL                 LLNEAYARCGEVCAEYAKTFYLVWCRRT
Sbjct: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLVWCRRT 120

Query: 121 DELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEG 180
           DELVDGPNASHITPKALARWETRLTDLFEGRPYDM+DAALSDTVSKYFVDIQPFKDMIEG
Sbjct: 121 DELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEG 180

Query: 181 MRVDLRKSRYENFDELYLYCYYVAGTVGLMR----------------------------- 240
           MRVDLRKSRYENFDELYLYCYYVAGTVGLM                              
Sbjct: 181 MRVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQ 240

Query: 241 ----------------------------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDE 300
                                       LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDE
Sbjct: 241 LTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDE 300

Query: 301 AEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRA 314
           AEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRA
Sbjct: 301 AEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRA 360

[Close]

BLAST of Carg11395 vs. NCBI nr
Match: XP_022985310.1 (phytoene synthase 2, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 571.2 bits (1471), Expect = 2.1e-159
Identity = 307/370 (82.97%), Postives = 311/370 (84.05%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGC+PIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYLVWCRRT 120
           AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYLVWCRRT
Sbjct: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYLVWCRRT 120

Query: 121 DELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEG 180
           DELVDGPNASHITPKALARWETRLTDLFEGRPYDM+DAALSDTVSKYFVDIQPFKDMIEG
Sbjct: 121 DELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQPFKDMIEG 180

Query: 181 MRVDLRKSRYENFDELYLYCYYVAGTVGLMR----------------------------- 240
           MRVD+RKSRYENFDELYLYCYYVAGTVGLM                              
Sbjct: 181 MRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQ 240

Query: 241 ----------------------------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDE 300
                                       LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDE
Sbjct: 241 LTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDE 300

Query: 301 AEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRA 314
           AEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFT+RAYVSKAKKLLSLPIAFGRA
Sbjct: 301 AEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAYVSKAKKLLSLPIAFGRA 360

[Close]

BLAST of Carg11395 vs. NCBI nr
Match: XP_022931536.1 (phytoene synthase 2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 565.5 bits (1456), Expect = 1.2e-157
Identity = 294/387 (75.97%), Postives = 295/387 (76.23%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL------ 120
           AALVREPRKDRERGL                 LLNEAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDT 180
                      VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDM+DAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------------ 240
           VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLM             
Sbjct: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 ---------------------------------------------LCDDDIFEGKVTEKW 300
                                                        LCDDDIFEGKVTEKW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 314
           RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY
Sbjct: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

[Close]

BLAST of Carg11395 vs. NCBI nr
Match: XP_022985309.1 (phytoene synthase 2, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 560.5 bits (1443), Expect = 3.7e-156
Identity = 307/387 (79.33%), Postives = 311/387 (80.36%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGC+PIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL------ 120
           AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDT 180
                      VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDM+DAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------------ 240
           VSKYFVDIQPFKDMIEGMRVD+RKSRYENFDELYLYCYYVAGTVGLM             
Sbjct: 181 VSKYFVDIQPFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 ---------------------------------------------LCDDDIFEGKVTEKW 300
                                                        LCDDDIFEGKVTEKW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 314
           RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFT+RAY
Sbjct: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTQRAY 360

[Close]

BLAST of Carg11395 vs. NCBI nr
Match: XP_023553556.1 (phytoene synthase 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.8 bits (1436), Expect = 2.4e-155
Identity = 307/387 (79.33%), Postives = 309/387 (79.84%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVN NALLSPKPRIRIGC+PIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNVNALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL------ 120
           AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDT 180
                      VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDM+DAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------------ 240
           VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLM             
Sbjct: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 ---------------------------------------------LCDDDIFEGKVTEKW 300
                                                        LCDDDIFE KVTEKW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEEKVTEKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 314
           RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY
Sbjct: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

[Close]

BLAST of Carg11395 vs. TAIR10
Match: AT5G17230.3 (PHYTOENE SYNTHASE)

HSP 1 Score: 350.1 bits (897), Expect = 1.4e-96
Identity = 190/368 (51.63%), Postives = 226/368 (61.41%), Query Frame = 0


Query: 38  SSAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLXXXXXXXXXXXXXXXXXL 97
           SS++VA+PS     S+EE+VY VVLKQAALV   ++ R                     L
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVN--KQLRSSSYDLDVKKPQDVVLPGSLSL 129

Query: 98  LNEAYARCGEVCAEYAKTFY--------------------------------LVWCRRTD 157
           L EAY RCGEVCAEYAKTFY                                LVWCRRTD
Sbjct: 130 LGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRRTD 189

Query: 158 ELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGM 217
           ELVDGPNASHITP AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQPF+DMIEGM
Sbjct: 190 ELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGM 249

Query: 218 RVDLRKSRYENFDELYLYCYYVAGTVGLMR------------------------------ 277
           R+DL+KSRY+NFD+LYLYCYYVAGTVGLM                               
Sbjct: 250 RMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQL 309

Query: 278 ---------------------------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEA 313
                                      L D+DIF GKVT+KWR+FMK Q+KRAR FFDEA
Sbjct: 310 TNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEA 369

[Close]

BLAST of Carg11395 vs. Swiss-Prot
Match: sp|Q9SSU8|PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota OX=4039 GN=PSY PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.4e-106
Identity = 206/354 (58.19%), Postives = 232/354 (65.54%), Query Frame = 0


Query: 37  GSSAVVANPSRSAEERVYEVVLKQAALVREPRKD--------RERGLXXXXXXXXXXXXX 96
           G SAV ANP R++EERVYEVVLKQAALVRE ++         +  G              
Sbjct: 42  GVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTGSKSFDKSENDDAGM 101

Query: 97  XXXXLLNEAYARCGEVCAEYAKTFYL-----------------VWCRRTDELVDGPNASH 156
               LLNEAY RCGEVCAEYAKTFYL                 VWCRRTDELVDGPNASH
Sbjct: 102 KSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASH 161

Query: 157 ITPKALARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYE 216
           ITPKAL RWE RL DLF+G+PYDM+DAAL+DTVS Y VDIQPFKDMI+GMR+DL+KSRY+
Sbjct: 162 ITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDMIDGMRMDLKKSRYQ 221

Query: 217 NFDELYLYCYYVAGTVGLMR---------------------------------------- 276
            FDELYLYCYYVAGTVGLM                                         
Sbjct: 222 TFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGED 281

Query: 277 -----------------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAA 309
                            +  + IF+GKVT+KWRSFMKGQIKRAR FFDEAEKG+AELS+A
Sbjct: 282 ARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSA 341

[Close]

BLAST of Carg11395 vs. Swiss-Prot
Match: sp|P49293|PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.0e-100
Identity = 196/349 (56.16%), Postives = 227/349 (65.04%), Query Frame = 0


Query: 39  SAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERGLXXXXXXXXXXXXXXXXXLL 98
           +++VANP+     SAE++VY VV+KQAALV+     R+                    LL
Sbjct: 79  ASMVANPAGEIAVSAEQKVYNVVMKQAALVK-----RQLRTAGELDVKPDIVLPGTLSLL 138

Query: 99  NEAYARCGEVCAEYAKTFYL-----------------VWCRRTDELVDGPNASHITPKAL 158
           NEAY RCGEVCAEYAKTFYL                 VWCRRTDELVDGPNASHITP AL
Sbjct: 139 NEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTAL 198

Query: 159 ARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELY 218
            RWE RL +LF+GRP+DM DAAL+DTV+K+ VDIQPFKDMIEGMR+DLRKSRY+NFDELY
Sbjct: 199 DRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELY 258

Query: 219 LYCYYVAGTVGLMR---------------------------------------------- 278
           LYCYYVAGTVGLM                                               
Sbjct: 259 LYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDARRGR 318

Query: 279 ------------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPV 309
                       L D+DIF G+VT+KWR+FMK QIKRAR FFDEAEKG+ EL+ ASRWPV
Sbjct: 319 IYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASRWPV 378

[Close]

BLAST of Carg11395 vs. Swiss-Prot
Match: sp|P53797|PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.0e-97
Identity = 190/347 (54.76%), Postives = 223/347 (64.27%), Query Frame = 0


Query: 39  SAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERGLXXXXXXXXXXXXXXXXXLL 98
           S++VANP+     S+E++VY+VVLKQAALV    KD+ +                   LL
Sbjct: 70  SSLVANPAGEATISSEQKVYDVVLKQAALV----KDQTKSSRKSTDVKPDIVLPGTVYLL 129

Query: 99  NEAYARCGEVCAEYAKTFYL-----------------VWCRRTDELVDGPNASHITPKAL 158
            +AY RCGEVCAEYAKTFYL                 VWCRRTDELVDG NASHITP AL
Sbjct: 130 KDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSAL 189

Query: 159 ARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELY 218
            RWE RL DLF GRPYDMFDAALSDTVS++ VDIQPF DM+EGMR+DL+KSRY+NFDELY
Sbjct: 190 DRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDELY 249

Query: 219 LYCYYVAGTVGLMR---------------------------------------------- 278
           LYCYYVAGTVGLM                                               
Sbjct: 250 LYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDARRGRI 309

Query: 279 -----------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVW 308
                      L D+D+F GKVT+KWRSFMK QIKRAR FF++AEKG+ ELS ASRWPVW
Sbjct: 310 YLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWPVW 369

[Close]

BLAST of Carg11395 vs. Swiss-Prot
Match: sp|P37271|PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 355.9 bits (912), Expect = 4.5e-97
Identity = 190/353 (53.82%), Postives = 226/353 (64.02%), Query Frame = 0


Query: 38  SSAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLXXXXXXXXXXXXXXXXXL 97
           SS++VA+PS     S+EE+VY VVLKQAALV   ++ R                     L
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVN--KQLRSSSYDLDVKKPQDVVLPGSLSL 129

Query: 98  LNEAYARCGEVCAEYAKTFYL-----------------VWCRRTDELVDGPNASHITPKA 157
           L EAY RCGEVCAEYAKTFYL                 VWCRRTDELVDGPNASHITP A
Sbjct: 130 LGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMA 189

Query: 158 LARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDEL 217
           L RWE RL DLF GRP+DM DAAL+DTV++Y VDIQPF+DMIEGMR+DL+KSRY+NFD+L
Sbjct: 190 LDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDL 249

Query: 218 YLYCYYVAGTVGLMR--------------------------------------------- 277
           YLYCYYVAGTVGLM                                              
Sbjct: 250 YLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGR 309

Query: 278 ------------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPV 313
                       L D+DIF GKVT+KWR+FMK Q+KRAR FFDEAEKG+ ELSAASRWPV
Sbjct: 310 VYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPV 369

[Close]

BLAST of Carg11395 vs. Swiss-Prot
Match: sp|Q52QW5|PSY_ONCHC (Phytoene synthase, chloroplastic OS=Oncidium hybrid cultivar OX=141207 GN=PSY PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.8e-97
Identity = 191/351 (54.42%), Postives = 224/351 (63.82%), Query Frame = 0


Query: 39  SAVVANP----SRSAEERVYEVVLKQAALVREPRKDRERGLXXXXXXXXXXXXXXXXXLL 98
           S++V NP    + S+E++VY+VVLKQAALV +  ++R                     LL
Sbjct: 66  SSLVVNPVGEVAISSEQKVYDVVLKQAALVEQQLRNR----------TVLEEKTGTTFLL 125

Query: 99  NEAYARCGEVCAEYAKTFYL-----------------VWCRRTDELVDGPNASHITPKAL 158
           NEAY RCG++C EYAKTFYL                 VWCRRTDELVDGPNASHITP AL
Sbjct: 126 NEAYDRCGQICEEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPSAL 185

Query: 159 ARWETRLTDLFEGRPYDMFDAALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELY 218
            RWE RL DLF GRPYDM DA+LSDTV  + VDIQPFKDMIEGMR+DL+KSRY+NFDELY
Sbjct: 186 DRWEARLEDLFAGRPYDMLDASLSDTVVNFPVDIQPFKDMIEGMRMDLKKSRYKNFDELY 245

Query: 219 LYCYYVAGTVGLMR---------------------------------------------- 278
           LYCYYVAGTVGLM                                               
Sbjct: 246 LYCYYVAGTVGLMSVPVMGIDPESDATTESVYNAALSLGIANQLTNILRDVGEDTRRGRV 305

Query: 279 -----------LCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVW 312
                      L D+DIF GKVT++WR+FMK QIKRAR FF EAEKGIAEL+ ASRWPV 
Sbjct: 306 YLPQDELAEAGLSDEDIFNGKVTDRWRNFMKNQIKRARTFFQEAEKGIAELNQASRWPVL 365

[Close]

BLAST of Carg11395 vs. TrEMBL
Match: tr|A0A0A0KVC2|A0A0A0KVC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063980 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 7.7e-134
Identity = 260/385 (67.53%), Postives = 271/385 (70.39%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  GV  SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL------ 120
           AALVREP++D +R L                 LL+EAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPKRDVQRAL--DWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDT 180
                      VWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDM+DAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------------ 240
           VSKY VDIQPFKDMIEGMR+DLRKSRYENFDELYLYCYYVAGTVGLM             
Sbjct: 181 VSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 ---------------------------------------------LCDDDIFEGKVTEKW 300
                                                        LCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 312
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY
Sbjct: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

[Close]

BLAST of Carg11395 vs. TrEMBL
Match: tr|T1RK41|T1RK41_CUCME (Phytoene synthase 3 OS=Cucumis melo OX=3656 GN=PSY3 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.5e-132
Identity = 258/385 (67.01%), Postives = 269/385 (69.87%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  G   SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL------ 120
           AALVREP++D +R L                 LL+EAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPKRDVQRAL--DWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDT 180
                      VWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDM+DAALSDT
Sbjct: 121 PERRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------------ 240
           VSKY VDIQPFKDMIEGMR+DLRKSRYE+FDELYLYCYYVAGTVGLM             
Sbjct: 181 VSKYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 ---------------------------------------------LCDDDIFEGKVTEKW 300
                                                        LCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300

Query: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 312
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY
Sbjct: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

[Close]

BLAST of Carg11395 vs. TrEMBL
Match: tr|U3L2Q6|U3L2Q6_CUCPE (Phytoene synthase OS=Cucurbita pepo OX=3663 GN=PSYC PE=2 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 9.1e-127
Identity = 253/393 (64.38%), Postives = 267/393 (67.94%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPI-----GCKRLSRFCGGVWGSSAVVANPSRSAEERVYE 60
           MSGVNAN+LLSP PRI            GCKRLS F  GV  SSA VANPSRS+EERVYE
Sbjct: 1   MSGVNANSLLSPMPRISXXXXXXXXXXNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL 120
           VVLKQAALVRE P++D E  L                 LL+EAY+RCGEVCAEYAKTFYL
Sbjct: 61  VVLKQAALVRELPKRDGETAL--DWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYL 120

Query: 121 -----------------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFD 180
                            VWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGR YDM+D
Sbjct: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYD 180

Query: 181 AALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------ 240
           AALSDTVSKY VDIQPFKDMIEGMR+DLRKSRYENFDELYLYCYYVAGTVGLM       
Sbjct: 181 AALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240

Query: 241 ---------------------------------------------------LCDDDIFEG 300
                                                              LCDDDIF G
Sbjct: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRG 300

Query: 301 KVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDN 314
           KVTEKWRSFMKGQIKRAR FFDEAEKGI EL+ ASRWPVWASLMLYKQILDSIEANDYDN
Sbjct: 301 KVTEKWRSFMKGQIKRARMFFDEAEKGIGELNGASRWPVWASLMLYKQILDSIEANDYDN 360

[Close]

BLAST of Carg11395 vs. TrEMBL
Match: tr|U3L2P5|U3L2P5_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. pepo OX=3664 GN=PSYC PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.2e-126
Identity = 253/393 (64.38%), Postives = 267/393 (67.94%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPI-----GCKRLSRFCGGVWGSSAVVANPSRSAEERVYE 60
           MSGVNAN+LLSP PRI            GCKRLS F  GV  SSA VANPSRS+EERVYE
Sbjct: 1   MSGVNANSLLSPMPRISXXXXXXXXXXNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PRKDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL 120
           VVLKQAALVRE P++D E  L                 LL+EAY+RCGEVCAEYAKTFYL
Sbjct: 61  VVLKQAALVRELPKRDGETAL--DWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYL 120

Query: 121 -----------------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFD 180
                            VWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGR YDM+D
Sbjct: 121 GTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYD 180

Query: 181 AALSDTVSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR------ 240
           AALSDTVSKY VDIQPFKDMIEGMR+DLRKSRYENFDELYLYCYYVAGTVGLM       
Sbjct: 181 AALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGL 240

Query: 241 ---------------------------------------------------LCDDDIFEG 300
                                                              LCDDDIF G
Sbjct: 241 APESKASVESVYNAALALGLANQLTNILRDVGEDARRGKVYLPQDELAQAGLCDDDIFRG 300

Query: 301 KVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDN 314
           KVTEKWRSFMKGQIKRAR FFDEAEKGI EL+ ASRWPVWASLMLYKQILDSIEANDYDN
Sbjct: 301 KVTEKWRSFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDN 360

[Close]

BLAST of Carg11395 vs. TrEMBL
Match: tr|A0A2P5BTG6|A0A2P5BTG6_PARAD (Squalene/phytoene synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_211930 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 228/383 (59.53%), Postives = 255/383 (66.58%), Query Frame = 0


Query: 5   NANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQAALV 64
           NAN+LLS  PR     +   C +LS F  GVW  S  VANP+RS+EE+VYEVVLKQAALV
Sbjct: 14  NANSLLSLVPRNGGPKRSKMCSKLS-FSSGVWAYSGTVANPARSSEEKVYEVVLKQAALV 73

Query: 65  REPR--KDRERGLXXXXXXXXXXXXXXXXXLLNEAYARCGEVCAEYAKTFYL-------- 124
           RE R  KD+E+                   LLNEAY RCGEVCAEYAKTFYL        
Sbjct: 74  REQRRPKDKEKEKALGLNQPIKTDGTTNWDLLNEAYDRCGEVCAEYAKTFYLGTMLMTPE 133

Query: 125 ---------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMFDAALSDTVS 184
                    VWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRP+DM+DAALS TVS
Sbjct: 134 RRKAIWAIYVWCRRTDELVDGPNASHITPKALDRWENRLTDLFEGRPFDMYDAALSHTVS 193

Query: 185 KYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMR-------------- 244
           KY VDIQPFKDMIEGMR+DLRKSRY+NFDELYLYCYYVAGTVGLM               
Sbjct: 194 KYPVDIQPFKDMIEGMRLDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESKSST 253

Query: 245 -------------------------------------------LCDDDIFEGKVTEKWRS 304
                                                      L D+DIF GKVT+KWRS
Sbjct: 254 ESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELASAGLSDEDIFRGKVTDKWRS 313

Query: 305 FMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVS 312
           FMKGQIKRAR FF+EAEKG+ EL++ASRWPV ASL+LY+QILD+IEANDYDNFTKRAYV 
Sbjct: 314 FMKGQIKRARMFFNEAEKGVKELNSASRWPVLASLLLYQQILDAIEANDYDNFTKRAYVG 373

The following BLAST results are available for this feature:

BLAST of Carg11395 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931537.1	6.5e-161	79.46	phytoene synthase 2, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
XP_022985310.1	2.1e-159	82.97	phytoene synthase 2, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]
XP_022931536.1	1.2e-157	75.97	phytoene synthase 2, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]
XP_022985309.1	3.7e-156	79.33	phytoene synthase 2, chloroplastic-like isoform X1 [Cucurbita maxima]	[more]
XP_023553556.1	2.4e-155	79.33	phytoene synthase 2, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg11395 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17230.3	1.4e-96	51.63	PHYTOENE SYNTHASE	[more]

BLAST of Carg11395 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SSU8\|PSY_DAUCA	2.4e-106	58.19	Phytoene synthase, chloroplastic OS=Daucus carota OX=4039 GN=PSY PE=2 SV=1	[more]
sp\|P49293\|PSY_CUCME	2.0e-100	56.16	Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1	[more]
sp\|P53797\|PSY_NARPS	2.0e-97	54.76	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE...	[more]
sp\|P37271\|PSY_ARATH	4.5e-97	53.82	Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV...	[more]
sp\|Q52QW5\|PSY_ONCHC	7.8e-97	54.42	Phytoene synthase, chloroplastic OS=Oncidium hybrid cultivar OX=141207 GN=PSY PE...	[more]

BLAST of Carg11395 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVC2\|A0A0A0KVC2_CUCSA	7.7e-134	67.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063980 PE=4 SV=1	[more]
tr\|T1RK41\|T1RK41_CUCME	1.5e-132	67.01	Phytoene synthase 3 OS=Cucumis melo OX=3656 GN=PSY3 PE=4 SV=1	[more]
tr\|U3L2Q6\|U3L2Q6_CUCPE	9.1e-127	64.38	Phytoene synthase OS=Cucurbita pepo OX=3663 GN=PSYC PE=2 SV=1	[more]
tr\|U3L2P5\|U3L2P5_CUCPE	1.2e-126	64.38	Phytoene synthase OS=Cucurbita pepo subsp. pepo OX=3664 GN=PSYC PE=2 SV=1	[more]
tr\|A0A2P5BTG6\|A0A2P5BTG6_PARAD	1.2e-113	59.53	Squalene/phytoene synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_211930...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006696	ergosterol biosynthetic process
GO:0009058	biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004310	farnesyl-diphosphate farnesyltransferase activity
GO:0051996	squalene synthase activity
GO:0016740	transferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR033904	Trans_IPPS_HH
IPR008949	Isoprenoid_synthase_dom_sf
IPR002060	Squ/phyt_synthse

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0006696	ergosterol biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function	GO:0004310	farnesyl-diphosphate farnesyltransferase activity
molecular_function	GO:0051996	squalene synthase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11395-RA	Carg11395-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 116..211 e-value: 5.9E-20 score: 71.8 coord: 215..289 e-value: 2.1E-11 score: 43.7
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	G3DSA:1.10.600.10		coord: 88..212 e-value: 1.5E-32 score: 114.9
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	G3DSA:1.10.600.10		coord: 213..296 e-value: 3.7E-23 score: 84.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	SSF48576	Terpenoid synthases	coord: 97..304
None	No IPR available	PANTHER	PTHR31480	FAMILY NOT NAMED	coord: 37..211 coord: 212..309
None	No IPR available	PANTHER	PTHR31480:SF4	SUBFAMILY NOT NAMED	coord: 37..211 coord: 212..309
IPR033904	Trans-Isoprenyl Diphosphate Synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 99..292 e-value: 1.34827E-57 score: 187.827

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11395	Cla005425	Watermelon (97103) v1	carwmB0652
Carg11395	Csa4G063980	Cucumber (Chinese Long) v2	carcuB0677
Carg11395	MELO3C016185	Melon (DHL92) v3.5.1	carmeB0652
Carg11395	ClCG07G010760	Watermelon (Charleston Gray)	carwcgB0637
Carg11395	CSPI04G07340	Wild cucumber (PI 183967)	carcpiB0687
Carg11395	Cucsa.179860	Cucumber (Gy14) v1	carcgyB0732
Carg11395	CmaCh04G006250	Cucurbita maxima (Rimu)	carcmaB0927
Carg11395	CmaCh16G004720	Cucurbita maxima (Rimu)	carcmaB0924
Carg11395	CmoCh04G006730	Cucurbita moschata (Rifu)	carcmoB0902
Carg11395	CmoCh16G005120	Cucurbita moschata (Rifu)	carcmoB0898
Carg11395	Lsi07G008170	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11395	Cp4.1LG14g03180	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11395	Cp4.1LG01g00990	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11395	CsGy4G007210	Cucumber (Gy14) v2	carcgybB0652
Carg11395	MELO3C016185.2	Melon (DHL92) v3.6.1	carmedB0662
Carg11395	CsaV3_4G007560	Cucumber (Chinese Long) v3	carcucB0689
Carg11395	Cla97C07G137500	Watermelon (97103) v2	carwmbB0682
Carg11395	Bhi01G002401	Wax gourd	carwgoB0770

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11395	Carg13119	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:

None