Cp4.1LG00g00140 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g00140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Heat shock protein
Location	Cp4.1LG00 : 245303 .. 247240 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTAGGAAAAAGGAAAAGGGAAAGATTCCAAATATCTTTACAGCCCTCCAAATATGCCCAAAGCATATGGTTCTCAAACCCCCCCATGTCTTTAAGCATCAATGTTATTAATAGCTCCAAGTTTGTGTTGCGCCCTAGCCACAGCTCCCCCCTGCCGGCATGGCCACTTCGAAGCCGCAACTGGAAGTCCATAAAGCAGACCACAACCCTTCAAAATGGAGTGTGGCTCTTGGAGAAGAGGTTTTCAGTAGATTTGTGGGGCAACCCAATTCGGGTGTGCAGAAGGTGTTGGGCGAGGGCTCGTTGTTCAGCCCGCTGCTGTTCGGGAGGTTCTTTGACCCCGCCGATGCCTTTCCGCTGTGGGAGTTTGAGGCCGATCTGTTGATGTCAGCCCTCCGCAGCTCTGGGAAATCTTCAATTGATTGGTTTCAGACCGATCAGGAATACGTTCTTCAAGCAGAATTACAAGGTATTTTCTTCTCTTTTTTTTTTTAAATTTTAATATTTAATTTATAAAATTAATTAAAAAAATTGGATTTAGCTGAAGATATTAGTAAGAAATTGATCGAGTAGAGGAAGGAAGAGAGATTTTTTTTACCTAGAAGTATTTTATGGATTTTTCAAAATATTAATTATTAGGTGCAAAATTAAATGAATTTTGATTATAAAATATAAAAAATGGTGAGAGATCAAATTTATTTCAAATCAGAACCTCCCACATCGAAGAATTTATAAACAATGAAGACTTTAAAATAGTAATCCCGTCCAACTTCTATTGGGGTGTGGGCCGGAAACGACACGCGCTAATTTAAACCCTAAACCCGTTTGATTGTTAGGGGGATTTTACCGGCGTTTACCCCTGTGGATCTCAAAAAACTTTAAACGCTGATGCACTGCGCGTGGTTAAGTTTCCAGTTGTCTAATATAGCCTTTGAGGTTCGTAGGTGGTGCTGCCTACACCATGTCATGGTGTCCTGCGGCGGCAACTATTGTCCTCGCCTCGTAATCACCCCCCTCTTTTTCATGCCAACTTTAATTTTACCAAAACTTTTACTCGTGATAGGTCTTTCATAGGTCTTTCAATTATAAAACTTTTACCTTTTACTCGTGATAGGTCTTTCATAGGTCTTTCAATTATAAATTTAGTGTCTAATTTATATAAAATTAAAATTTTACTGAAAAACATATTAAATATAAAATTGAAAGTGATTTTTAAATTTGACGATGGTTAAGAACATTCTCAAACATTTATTTTGCAGAGAGTTGAAGTTGAAAGTTGAAAGGACGATAAAGAGAGAATAGATTTTAATGGTGAAATTATATTATCAAATTCGTTTTAAAAGACTCTCCAGAGGGCCTTCAACTCTCTCTGTTGCTACTCATCCAAAAAGATTGGGTGATATGTTTGATTGACACAAACCAAAATTTTACAAACACACAGAACCTTGGAGAAACGCTTTGCAAATCTCCGTGGAAGACGGGAAGGTGTTAGAGATAAGTGGTCAGTTGAAGGAACAACAAAGAGAAGCCACGAAGCTCGTCGATTGGCGATGTGCCAATTGGTGGGAGTATGGATTCGTTCGGCGACTCGAGTTGCCTGAAGATGTTGATTGTTGTAGAATAGAGGCTCGGATGAAGAATGACACGATTCTTGAGATCAAGATTCCCAAGTTAGAATCGAATAGAGGTGCTGAATCAAAGAGCAAGGATTCTGATCAAGATGTTTAAGTTCATGGCCAAATTTGTAATGGAAAACGTGTTTAACTTAAACTTAATTTACATATGCTTTGTGGATCTCAAATATATGTATGTTTCTGACCAACTTCTATGGACGAGAATACAAACACTTTCGACATGTGTAGTATACAATTTTATAATTACATTTCTAACCTCATATCAAATGATTAATGGCTTATAATATTGTTATTTTGTTCTCT

mRNA sequence

GGGTAGGAAAAAGGAAAAGGGAAAGATTCCAAATATCTTTACAGCCCTCCAAATATGCCCAAAGCATATGGTTCTCAAACCCCCCCATGTCTTTAAGCATCAATGTTATTAATAGCTCCAAGTTTGTGTTGCGCCCTAGCCACAGCTCCCCCCTGCCGGCATGGCCACTTCGAAGCCGCAACTGGAAGTCCATAAAGCAGACCACAACCCTTCAAAATGGAGTGTGGCTCTTGGAGAAGAGGTTTTCAGTAGATTTGTGGGGCAACCCAATTCGGGTGTGCAGAAGGTGTTGGGCGAGGGCTCGTTGTTCAGCCCGCTGCTGTTCGGGAGGTTCTTTGACCCCGCCGATGCCTTTCCGCTGTGGGAGTTTGAGGCCGATCTGTTGATGTCAGCCCTCCGCAGCTCTGGGAAATCTTCAATTGATTGGTTTCAGACCGATCAGGAATACGTTCTTCAAGCAGAATTACAAGAACCTTGGAGAAACGCTTTGCAAATCTCCGTGGAAGACGGGAAGGTGTTAGAGATAAGTGGTCAGTTGAAGGAACAACAAAGAGAAGCCACGAAGCTCGTCGATTGGCGATGTGCCAATTGGTGGGAGTATGGATTCGTTCGGCGACTCGAGTTGCCTGAAGATGTTGATTGTTGTAGAATAGAGGCTCGGATGAAGAATGACACGATTCTTGAGATCAAGATTCCCAAGTTAGAATCGAATAGAGGTGCTGAATCAAAGAGCAAGGATTCTGATCAAGATGTTTAAGTTCATGGCCAAATTTGTAATGGAAAACGTGTTTAACTTAAACTTAATTTACATATGCTTTGTGGATCTCAAATATATGTATGTTTCTGACCAACTTCTATGGACGAGAATACAAACACTTTCGACATGTGTAGTATACAATTTTATAATTACATTTCTAACCTCATATCAAATGATTAATGGCTTATAATATTGTTATTTTGTTCTCT

Coding sequence (CDS)

ATGGCCACTTCGAAGCCGCAACTGGAAGTCCATAAAGCAGACCACAACCCTTCAAAATGGAGTGTGGCTCTTGGAGAAGAGGTTTTCAGTAGATTTGTGGGGCAACCCAATTCGGGTGTGCAGAAGGTGTTGGGCGAGGGCTCGTTGTTCAGCCCGCTGCTGTTCGGGAGGTTCTTTGACCCCGCCGATGCCTTTCCGCTGTGGGAGTTTGAGGCCGATCTGTTGATGTCAGCCCTCCGCAGCTCTGGGAAATCTTCAATTGATTGGTTTCAGACCGATCAGGAATACGTTCTTCAAGCAGAATTACAAGAACCTTGGAGAAACGCTTTGCAAATCTCCGTGGAAGACGGGAAGGTGTTAGAGATAAGTGGTCAGTTGAAGGAACAACAAAGAGAAGCCACGAAGCTCGTCGATTGGCGATGTGCCAATTGGTGGGAGTATGGATTCGTTCGGCGACTCGAGTTGCCTGAAGATGTTGATTGTTGTAGAATAGAGGCTCGGATGAAGAATGACACGATTCTTGAGATCAAGATTCCCAAGTTAGAATCGAATAGAGGTGCTGAATCAAAGAGCAAGGATTCTGATCAAGATGTTTAA

Protein sequence

MATSKPQLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFDPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIPKLESNRGAESKSKDSDQDV

Homology

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BLAST of Cp4.1LG00g00140 vs. Swiss-Prot
Match: HS217_ARATH (21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48
Identity = 92/181 (50.83%), Postives = 128/181 (70.72%), Query Frame = 1


Query: 7   QLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFDPADAFP 66
           +LE+H  D  P KWSV LG++VF RF+       + V GEGSLFSP LFG++FDP+DAFP
Sbjct: 9   KLEIHTDDKTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSDAFP 68

Query: 67  LWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVE-DGKVLEISGQ 126
           LWEFEA++L+++LRS G+  +DW QTDQ YVL++++    +N +Q+ V+ +G+V+EISGQ
Sbjct: 69  LWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEISGQ 128

Query: 127 LKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKND---TILEIKIPKLE 184
               ++ AT   DWR   WWE+G+VRRLELP D D    EA + N+   + LEI+IPK+ 
Sbjct: 129 WNSNKKAATN-SDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIPKIN 188

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BLAST of Cp4.1LG00g00140 vs. Swiss-Prot
Match: HS223_ORYSJ (22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica GN=HSP22.3 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.8e-36
Identity = 80/185 (43.24%), Postives = 118/185 (63.78%), Query Frame = 1


Query: 8   LEVHKA--DHNPSKWSVALGEEVFSRFVGQPNSGV-------QKVLGEGSLFSPLLFGRF 67
           +EV +A  D    +W ++L E  FS F+     GV       + V GEGSLFSP LFG+F
Sbjct: 7   IEVRQAVGDGAAPRWRMSLLENTFSSFLQSIGGGVAADGAAARAVFGEGSLFSPFLFGKF 66

Query: 68  FDPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDG- 127
           FDPADAFPLWEFE ++L++ALR   ++++DW +TD EY L+A++    +  +++S +D  
Sbjct: 67  FDPADAFPLWEFEPEVLLAALRRGARTTVDWAETDSEYYLRADIPGGRKCDVEVSGDDAM 126

Query: 128 KVLEISGQLK-EQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKN-DTILE 181
           +V+++SG  +           DWR   WWE+GFVRR+ELPED D  ++EA   + + +LE
Sbjct: 127 RVVDVSGLWRAAPPPPPPDGRDWRAGRWWEHGFVRRVELPEDADWRKVEAFFDDGEGLLE 186

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BLAST of Cp4.1LG00g00140 vs. Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 1


Query: 43  VLGEGSLFSPLLFGRFFDPADAFPLWEFEADLLMSALRSSGK---SSIDWFQTDQEYVLQ 102
           ++   ++F P      +DP D FP       L   A   +     + IDW +T + +V +
Sbjct: 3   MIRRSNVFDPFSLD-LWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFK 62

Query: 103 AELQEPWRNALQISVEDGKVLEISGQ-LKEQQREATKLVDWRCANWWEYGFVRRLELPED 162
           A++    +  +++ VEDG VL+ISG+ +KEQ+ +  K   W         F+RR  LPE+
Sbjct: 63  ADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDK---WHRVERSSGKFLRRFRLPEN 122

Query: 163 VDCCRIEARMKNDTILEIKIPKLESNR 186
               +I+A M+N  +L + +PK E  +
Sbjct: 123 TKPEQIKASMENG-VLTVTVPKEEPKK 144

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BLAST of Cp4.1LG00g00140 vs. Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.0e-09
Identity = 42/138 (30.43%), Postives = 76/138 (55.07%), Query Frame = 1


Query: 59  FDPADAFPLWEFEADLLMSALRSSG--KSSIDWFQTDQEYVLQAELQEPWRNALQISVED 118
           FDP  +  +W+   +L   +  SS    + +DW +T + +V +A+L    +  +++ +ED
Sbjct: 19  FDPF-SLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIED 78

Query: 119 GKVLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEI 178
             VL+ISG+   ++ E  K   W        GF R+  LPE+V   +++A M+N  +L +
Sbjct: 79  DSVLKISGERHVEKEE--KQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENG-VLTV 138

Query: 179 KIPKLESN-RGAESKSKD 194
            +PK+E+N + A+ KS D
Sbjct: 139 TVPKVETNKKKAQVKSID 152

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BLAST of Cp4.1LG00g00140 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-09
Identity = 37/124 (29.84%), Postives = 64/124 (51.61%), Query Frame = 1


Query: 59  FDPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGK 118
           +DP   FPL    A        +   + IDW +T Q +V +A+L    +  +++ +E+GK
Sbjct: 24  WDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGK 83

Query: 119 VLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKI 178
           VL+ISG+  +++ E  K   W         F+RR  LPE+     ++A M N  ++ + +
Sbjct: 84  VLQISGERNKEKEE--KNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANG-VVTVTV 143

Query: 179 PKLE 183
           PK+E
Sbjct: 144 PKVE 144

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BLAST of Cp4.1LG00g00140 vs. TrEMBL
Match: H6TB45_CITLA (HSP23.0 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.2e-83
Identity = 155/199 (77.89%), Postives = 170/199 (85.43%), Query Frame = 1


Query: 1   MATSKPQLEVHKADHN-PSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFF 60
           MATSK QLEVHK DH+ PSKWSV+LGEEVF +FVGQ NS VQ V G+GSLFSPLLFG+FF
Sbjct: 1   MATSKQQLEVHKEDHHTPSKWSVSLGEEVFRKFVGQANSAVQTVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKV 120
           DPADAFPLWEFE+DLL+S LR SGKSS+DWFQTDQEY LQAEL E WRNALQIS+EDGKV
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSVDWFQTDQEYGLQAELLEAWRNALQISIEDGKV 120

Query: 121 LEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIP 180
           LEISGQLKEQQRE     DWR  NWWE+G+VRRLELPED D  R+EARMKND +LEIKIP
Sbjct: 121 LEISGQLKEQQREGRTTFDWRSVNWWEHGYVRRLELPEDADWSRMEARMKNDHVLEIKIP 180

Query: 181 KLESNRGAESKSKD-SDQD 198
           K E+N G ES SKD SD+D
Sbjct: 181 KSETNEGVESNSKDNSDED 199

[Close]

BLAST of Cp4.1LG00g00140 vs. TrEMBL
Match: A0A0A0L6D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081340 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.9e-82
Identity = 157/200 (78.50%), Postives = 175/200 (87.50%), Query Frame = 1


Query: 1   MATSKPQLEVHKADH-NPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFF 60
           MATSK QLEVHK DH  PSKWSV+LGEEVF RF+GQ NS +QKV G+GSLFSPLLFG+FF
Sbjct: 1   MATSK-QLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISV-EDGK 120
           DPADAFPLWEFE+DLL+S LR SGKSSIDW QTDQEYVLQAEL E WRNALQIS+ EDGK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120

Query: 121 VLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKI 180
           VLEISGQLKEQQRE    VDWR  +WWE+G+VRRLELPED D  R+EAR+KND +LEIKI
Sbjct: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180

Query: 181 PKLESNRGAESKSKD-SDQD 198
           PKLE+N+G+ESKSKD SD+D
Sbjct: 181 PKLETNQGSESKSKDNSDED 199

[Close]

BLAST of Cp4.1LG00g00140 vs. TrEMBL
Match: A7UNS9_9ROSI (Heat shock protein OS=Corchorus olitorius PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-59
Identity = 110/180 (61.11%), Postives = 140/180 (77.78%), Query Frame = 1


Query: 1   MATSKPQLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFD 60
           M++S  +L+VH  D  P KW ++L E+VF RF+ Q N  + KV GEGSLFSPLLFG++FD
Sbjct: 1   MSSSCIKLDVHTDDQTPQKWCISLAEDVFKRFLSQGNPTLHKVFGEGSLFSPLLFGKYFD 60

Query: 61  PADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVL 120
           P+DAFPLW+FE+D L+S LR+SGKS++DWFQTDQ YVL+AEL    +  +QI VE GK++
Sbjct: 61  PSDAFPLWDFESDSLLSNLRNSGKSTVDWFQTDQAYVLKAELPGLGKTNVQIHVEKGKIV 120

Query: 121 EISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIPK 180
           EISGQLK+Q+   TK  DWR  NWWEYG+VRRLELPED D  RIEA + ND +LEI+IP+
Sbjct: 121 EISGQLKQQRESKTK--DWRSCNWWEYGYVRRLELPEDADWKRIEAYLSNDVLLEIRIPR 178

[Close]

BLAST of Cp4.1LG00g00140 vs. TrEMBL
Match: V4US93_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009527mg PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58
Identity = 114/198 (57.58%), Postives = 145/198 (73.23%), Query Frame = 1


Query: 3   TSKPQLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFDPA 62
           TS  +LEVH  D  P KW VALGE+VF RF+ Q N  V K  G+GSLFSPLLFG+FFDP+
Sbjct: 2   TSCIKLEVHTDDRTPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFDPS 61

Query: 63  DAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVLEI 122
           DAFPLWEFE+D+L+S L+S+G+SS+DW QTDQ YVL+AEL    +N +Q+SVE+GK++EI
Sbjct: 62  DAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEI 121

Query: 123 SGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIPK-- 182
           SGQ KEQ+    K  DWR  +WWE+GFVRRLELPED D  + EA + ND  LEI+IPK  
Sbjct: 122 SGQWKEQRDPRAK--DWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKNP 181

Query: 183 ----LESNRGAESKSKDS 195
               +    GA +K+ ++
Sbjct: 182 STCDISHGNGAATKNSEA 197

[Close]

BLAST of Cp4.1LG00g00140 vs. TrEMBL
Match: A0A067E641_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028228mg PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58
Identity = 114/198 (57.58%), Postives = 145/198 (73.23%), Query Frame = 1


Query: 3   TSKPQLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFDPA 62
           TS  +LEVH  D  P KW VALGE+VF RF+ Q N  V K  G+GSLFSPLLFG+FFDP+
Sbjct: 2   TSCIKLEVHTDDRTPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFDPS 61

Query: 63  DAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVLEI 122
           DAFPLWEFE+D+L+S L+S+G+SS+DW QTDQ YVL+AEL    +N +Q+SVE+GK++EI
Sbjct: 62  DAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEI 121

Query: 123 SGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIPK-- 182
           SGQ KEQ+    K  DWR  +WWE+GFVRRLELPED D  + EA + ND  LEI+IPK  
Sbjct: 122 SGQWKEQRDPRAK--DWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKNP 181

Query: 183 ----LESNRGAESKSKDS 195
               +    GA +K+ ++
Sbjct: 182 STCDISHGNGAATKNSEA 197

[Close]

BLAST of Cp4.1LG00g00140 vs. TAIR10
Match: AT5G54660.1 (AT5G54660.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 194.5 bits (493), Expect = 6.1e-50
Identity = 92/181 (50.83%), Postives = 128/181 (70.72%), Query Frame = 1


Query: 7   QLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFDPADAFP 66
           +LE+H  D  P KWSV LG++VF RF+       + V GEGSLFSP LFG++FDP+DAFP
Sbjct: 9   KLEIHTDDKTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSDAFP 68

Query: 67  LWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVE-DGKVLEISGQ 126
           LWEFEA++L+++LRS G+  +DW QTDQ YVL++++    +N +Q+ V+ +G+V+EISGQ
Sbjct: 69  LWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEISGQ 128

Query: 127 LKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKND---TILEIKIPKLE 184
               ++ AT   DWR   WWE+G+VRRLELP D D    EA + N+   + LEI+IPK+ 
Sbjct: 129 WNSNKKAATN-SDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIPKIN 188

[Close]

BLAST of Cp4.1LG00g00140 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-10
Identity = 42/138 (30.43%), Postives = 76/138 (55.07%), Query Frame = 1


Query: 59  FDPADAFPLWEFEADLLMSALRSSG--KSSIDWFQTDQEYVLQAELQEPWRNALQISVED 118
           FDP  +  +W+   +L   +  SS    + +DW +T + +V +A+L    +  +++ +ED
Sbjct: 19  FDPF-SLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIED 78

Query: 119 GKVLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEI 178
             VL+ISG+   ++ E  K   W        GF R+  LPE+V   +++A M+N  +L +
Sbjct: 79  DSVLKISGERHVEKEE--KQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENG-VLTV 138

Query: 179 KIPKLESN-RGAESKSKD 194
            +PK+E+N + A+ KS D
Sbjct: 139 TVPKVETNKKKAQVKSID 152

[Close]

BLAST of Cp4.1LG00g00140 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-09
Identity = 45/154 (29.22%), Postives = 71/154 (46.10%), Query Frame = 1


Query: 52  PLLFG----RFFDPADAFPLWEFEADLLMSALRSSG--------KSSIDWFQTDQEYVLQ 111
           P +FG      FDP        FE  L  S L ++          + +DW +T + +V +
Sbjct: 5   PSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFK 64

Query: 112 AELQEPWRNALQISVEDGKVLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDV 171
           A+L    +  +++ VEDG +L+ISG+   +  E  K   W         F RR  LPE+ 
Sbjct: 65  ADLPGLRKEEVKVEVEDGNILQISGERSNENEE--KNDKWHRVERSSGKFTRRFRLPENA 124

Query: 172 DCCRIEARMKNDTILEIKIPKLESNRGAESKSKD 194
               I+A M+N  +L + +PK+   +  E KS D
Sbjct: 125 KMEEIKASMENG-VLSVTVPKVPEKK-PEVKSID 154

[Close]

BLAST of Cp4.1LG00g00140 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-09
Identity = 43/154 (27.92%), Postives = 75/154 (48.70%), Query Frame = 1


Query: 52  PLLFG----RFFDPADAFPLWE-FEADLLMSALRSSGK-------SSIDWFQTDQEYVLQ 111
           P  FG      FDP  +  +W+ FE  L      +  K       + +DW +T + +V +
Sbjct: 5   PSFFGGRRTNVFDPF-SLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFK 64

Query: 112 AELQEPWRNALQISVEDGKVLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDV 171
           A++    +  +++ VEDG +L+ISG+   +  E  K   W         F+RR  LPE+ 
Sbjct: 65  ADVPGLKKEEVKVEVEDGNILQISGERSSENEE--KSDTWHRVERSSGKFMRRFRLPENA 124

Query: 172 DCCRIEARMKNDTILEIKIPKLESNRGAESKSKD 194
               ++A M+N  +L + +PK++ ++  E KS D
Sbjct: 125 KVEEVKASMENG-VLSVTVPKVQESK-PEVKSVD 153

[Close]

BLAST of Cp4.1LG00g00140 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 3.4e-08
Identity = 41/141 (29.08%), Postives = 75/141 (53.19%), Query Frame = 1


Query: 59  FDPADAFPLWEFEADLLMSALRSSGKSSI-----DWFQTDQEYVLQAELQEPWRNALQIS 118
           FDP  +  +W+   +L   +  S   S+I     DW +T + +V +A+L    +  +++ 
Sbjct: 18  FDPF-SLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVE 77

Query: 119 VEDGKVLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTI 178
           +ED  VL+ISG+   ++ E  K   W         F R+ +LPE+V   +++A M+N  +
Sbjct: 78  IEDDSVLKISGERHVEKEE--KQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG-V 137

Query: 179 LEIKIPKL-ESNRGAESKSKD 194
           L + +PK+ E+ + A+ KS D
Sbjct: 138 LTVTVPKVEEAKKKAQVKSID 154

[Close]

BLAST of Cp4.1LG00g00140 vs. NCBI nr
Match: gi|315932724|gb|ADU55792.1| (HSP23.0 [Citrullus lanatus])

HSP 1 Score: 315.1 bits (806), Expect = 8.8e-83
Identity = 155/199 (77.89%), Postives = 170/199 (85.43%), Query Frame = 1


Query: 1   MATSKPQLEVHKADHN-PSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFF 60
           MATSK QLEVHK DH+ PSKWSV+LGEEVF +FVGQ NS VQ V G+GSLFSPLLFG+FF
Sbjct: 1   MATSKQQLEVHKEDHHTPSKWSVSLGEEVFRKFVGQANSAVQTVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKV 120
           DPADAFPLWEFE+DLL+S LR SGKSS+DWFQTDQEY LQAEL E WRNALQIS+EDGKV
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSVDWFQTDQEYGLQAELLEAWRNALQISIEDGKV 120

Query: 121 LEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIP 180
           LEISGQLKEQQRE     DWR  NWWE+G+VRRLELPED D  R+EARMKND +LEIKIP
Sbjct: 121 LEISGQLKEQQREGRTTFDWRSVNWWEHGYVRRLELPEDADWSRMEARMKNDHVLEIKIP 180

Query: 181 KLESNRGAESKSKD-SDQD 198
           K E+N G ES SKD SD+D
Sbjct: 181 KSETNEGVESNSKDNSDED 199

[Close]

BLAST of Cp4.1LG00g00140 vs. NCBI nr
Match: gi|449470421|ref|XP_004152915.1| (PREDICTED: 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 1.3e-81
Identity = 157/200 (78.50%), Postives = 175/200 (87.50%), Query Frame = 1


Query: 1   MATSKPQLEVHKADH-NPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFF 60
           MATSK QLEVHK DH  PSKWSV+LGEEVF RF+GQ NS +QKV G+GSLFSPLLFG+FF
Sbjct: 1   MATSK-QLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISV-EDGK 120
           DPADAFPLWEFE+DLL+S LR SGKSSIDW QTDQEYVLQAEL E WRNALQIS+ EDGK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120

Query: 121 VLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKI 180
           VLEISGQLKEQQRE    VDWR  +WWE+G+VRRLELPED D  R+EAR+KND +LEIKI
Sbjct: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180

Query: 181 PKLESNRGAESKSKD-SDQD 198
           PKLE+N+G+ESKSKD SD+D
Sbjct: 181 PKLETNQGSESKSKDNSDED 199

[Close]

BLAST of Cp4.1LG00g00140 vs. NCBI nr
Match: gi|659126952|ref|XP_008463443.1| (PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 1.8e-80
Identity = 154/200 (77.00%), Postives = 174/200 (87.00%), Query Frame = 1


Query: 1   MATSKPQLEVHKADHN-PSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFF 60
           MAT K QLEVHK DH+ PSKWSV+LGEEVF RF+GQ NS +QKV G+GSLFSPLLFG+FF
Sbjct: 1   MATPK-QLEVHKEDHSTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVED-GK 120
           DPADAFPLWEFE+DLL+S LR SGKSSIDW QTDQEY+LQAEL E WRNALQIS+E+ GK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYILQAELLEAWRNALQISIEEGGK 120

Query: 121 VLEISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKI 180
           VLEISGQL+EQQRE    VDWR  NWWE+GFVRRLELPED D  R+EAR+KND +LEIKI
Sbjct: 121 VLEISGQLREQQREGKTTVDWRRVNWWEHGFVRRLELPEDADSSRMEARIKNDLVLEIKI 180

Query: 181 PKLESNRGAESKSKD-SDQD 198
           PKLE+N+ +ESKSKD SD+D
Sbjct: 181 PKLETNQSSESKSKDNSDED 199

[Close]

BLAST of Cp4.1LG00g00140 vs. NCBI nr
Match: gi|156446279|gb|ABU63401.1| (heat shock protein [Corchorus olitorius])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59
Identity = 110/180 (61.11%), Postives = 140/180 (77.78%), Query Frame = 1


Query: 1   MATSKPQLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFD 60
           M++S  +L+VH  D  P KW ++L E+VF RF+ Q N  + KV GEGSLFSPLLFG++FD
Sbjct: 1   MSSSCIKLDVHTDDQTPQKWCISLAEDVFKRFLSQGNPTLHKVFGEGSLFSPLLFGKYFD 60

Query: 61  PADAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVL 120
           P+DAFPLW+FE+D L+S LR+SGKS++DWFQTDQ YVL+AEL    +  +QI VE GK++
Sbjct: 61  PSDAFPLWDFESDSLLSNLRNSGKSTVDWFQTDQAYVLKAELPGLGKTNVQIHVEKGKIV 120

Query: 121 EISGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIPK 180
           EISGQLK+Q+   TK  DWR  NWWEYG+VRRLELPED D  RIEA + ND +LEI+IP+
Sbjct: 121 EISGQLKQQRESKTK--DWRSCNWWEYGYVRRLELPEDADWKRIEAYLSNDVLLEIRIPR 178

[Close]

BLAST of Cp4.1LG00g00140 vs. NCBI nr
Match: gi|641827187|gb|KDO46381.1| (hypothetical protein CISIN_1g028228mg [Citrus sinensis])

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58
Identity = 114/198 (57.58%), Postives = 145/198 (73.23%), Query Frame = 1


Query: 3   TSKPQLEVHKADHNPSKWSVALGEEVFSRFVGQPNSGVQKVLGEGSLFSPLLFGRFFDPA 62
           TS  +LEVH  D  P KW VALGE+VF RF+ Q N  V K  G+GSLFSPLLFG+FFDP+
Sbjct: 2   TSCIKLEVHTDDRTPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFDPS 61

Query: 63  DAFPLWEFEADLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISVEDGKVLEI 122
           DAFPLWEFE+D+L+S L+S+G+SS+DW QTDQ YVL+AEL    +N +Q+SVE+GK++EI
Sbjct: 62  DAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEI 121

Query: 123 SGQLKEQQREATKLVDWRCANWWEYGFVRRLELPEDVDCCRIEARMKNDTILEIKIPK-- 182
           SGQ KEQ+    K  DWR  +WWE+GFVRRLELPED D  + EA + ND  LEI+IPK  
Sbjct: 122 SGQWKEQRDPRAK--DWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKNP 181

Query: 183 ----LESNRGAESKSKDS 195
               +    GA +K+ ++
Sbjct: 182 STCDISHGNGAATKNSEA 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g00140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS217_ARATH	1.1e-48	50.83	21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=...	[more]
HS223_ORYSJ	2.8e-36	43.24	22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica GN=HSP22.3 ...	[more]
HS174_ORYSJ	1.7e-09	29.25	17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 P...	[more]
HS17A_ARATH	5.0e-09	30.43	17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 S...	[more]
HSP11_DAUCA	6.5e-09	29.84	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]

BLAST of Cp4.1LG00g00140 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB45_CITLA	6.2e-83	77.89	HSP23.0 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0L6D5_CUCSA	8.9e-82	78.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081340 PE=3 SV=1	[more]
A7UNS9_9ROSI	1.6e-59	61.11	Heat shock protein OS=Corchorus olitorius PE=2 SV=1	[more]
V4US93_9ROSI	1.8e-58	57.58	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009527mg PE=3 SV=1	[more]
A0A067E641_CITSI	1.8e-58	57.58	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028228mg PE=3 SV=1	[more]

BLAST of Cp4.1LG00g00140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54660.1	6.1e-50	50.83	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	2.8e-10	30.43	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	5.3e-09	29.22	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	6.9e-09	27.92	heat shock protein 17.4	[more]
AT1G07400.1	3.4e-08	29.08	HSP20-like chaperones superfamily protein	[more]

BLAST of Cp4.1LG00g00140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932724\|gb\|ADU55792.1\|	8.8e-83	77.89	HSP23.0 [Citrullus lanatus]	[more]
gi\|449470421\|ref\|XP_004152915.1\|	1.3e-81	78.50	PREDICTED: 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus]	[more]
gi\|659126952\|ref\|XP_008463443.1\|	1.8e-80	77.00	PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo]	[more]
gi\|156446279\|gb\|ABU63401.1\|	2.3e-59	61.11	heat shock protein [Corchorus olitorius]	[more]
gi\|641827187\|gb\|KDO46381.1\|	2.6e-58	57.58	hypothetical protein CISIN_1g028228mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g00140.1	Cp4.1LG00g00140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 88..185 score: 4.7
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 88..180 score: 15
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 57..185 score: 8.5
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 52..185 score: 4.88
None	No IPR available	PANTHER	PTHR11527:SF5	21.7 KDA CLASS VI HEAT SHOCK PROTEIN	coord: 1..198 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g00140	Cucsa.059700	Cucumber (Gy14) v1	cgycpeB0076
Cp4.1LG00g00140	CmaCh16G008470	Cucurbita maxima (Rimu)	cmacpeB337
Cp4.1LG00g00140	CmoCh16G009150	Cucurbita moschata (Rifu)	cmocpeB301
Cp4.1LG00g00140	Cla005275	Watermelon (97103) v1	cpewmB002
Cp4.1LG00g00140	Csa3G081340	Cucumber (Chinese Long) v2	cpecuB009
Cp4.1LG00g00140	MELO3C025424	Melon (DHL92) v3.5.1	cpemeB011
Cp4.1LG00g00140	ClCG10G005700	Watermelon (Charleston Gray)	cpewcgB001
Cp4.1LG00g00140	CSPI03G05380	Wild cucumber (PI 183967)	cpecpiB007
Cp4.1LG00g00140	Lsi05G006280	Bottle gourd (USVL1VR-Ls)	cpelsiB014
Cp4.1LG00g00140	MELO3C025424.2	Melon (DHL92) v3.6.1	cpemedB013
Cp4.1LG00g00140	CsaV3_3G005420	Cucumber (Chinese Long) v3	cpecucB0011
Cp4.1LG00g00140	Bhi11G000520	Wax gourd	cpewgoB0000
Cp4.1LG00g00140	CsGy3G005480	Cucumber (Gy14) v2	cgybcpeB280
Cp4.1LG00g00140	Carg24823	Silver-seed gourd	carcpeB1109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g00140	Silver-seed gourd	carcpeB0933
Cp4.1LG00g00140	Cucurbita pepo (Zucchini)	cpecpeB007
Cp4.1LG00g00140	Cucurbita maxima (Rimu)	cmacpeB692
Cp4.1LG00g00140	Cucurbita moschata (Rifu)	cmocpeB644