Cucsa.059700 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.059700
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Heat shock protein
Location	scaffold00621 : 255658 .. 258621 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTACATATGTTATAATATTAATAGAGCTCCAAAACACTTCCAAGTTTCTTCTTGCACCCTAGCCACATAGAACTTCCCTCTTCCTTTAGCTATGGCCACTTCAAAACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCGTCAAAATGGAGTGTCTCTTTGGGAGAAGAGGTTTTTAGAAGATTTCTAGGGCAAGCTAATTCAGCTATTCAAAAGGTGTTCGGCGATGGCTCGCTGTTTAGTCCGTTGTTGTTCGGAAAGTTCTTTGATCCCGCTGATGCTTTTCCACTATGGGAGTTTGAGTCTGATCTATTGTTGTCCAACCTTCGTATCTCTGGAAAATCTTCAATAGATTGGTCTCAAACTGATCAAGAGTATGTTCTACAAGCAGAATTACTAGGTATTTGATATTTTCCACTTATTCTTTCATCTTTCCTTTCCACCGCTTTCAACACCTTCTGCATAATTTGAACTATAGACCTCTTGGTTGTTATATAATTTAACTTGTGTAATCTTTCATAGTTTACTTGGCATGTAGTTTCAAAGCTTTAAGAATCTGACATTAAAATTACATTAATTTTATAAAAAAAAGGTGTAAGGGAAAATTTTCCACAAAGTTATACATGTGACTAAACTTTGGTAAATGAAAGTGCATTTAAATTTAGGGGTTAAGCAAGAGAATATACAACGAAAGGATATTGGAATAAATGAATTTAAGGTGCTTAAGAAATGGTTAAAATCACTCCTCCATTTTAAAATCAATCTAATTTTTTTTAACGATTTTAAATCAATTTTAATAATATAAAGGTGTGCAAATTGAAACTTGAAATTGATTTTGATTTTGAGTGATTAAAGCTTCGAATCTATATATATATATATACTATGAACAAAATACTTATAGCAAAAGGCAACAAAAATTGCTTTTGATCCCATGTTGTTTATGAGGATGTTTGAATTGTTAACAATTTCATATAGAACAAATTTAGTTATATATGTATTTTTAAATTTGTAAAATTTAATCTTTATTGAAAAAGATTTTATCAATATTAATATATCGGTTTTTATTGTTTTAGAATTTAGAGTTTGTAGCTTCTAAACATGTTTTCCCTAATTAGTTTATTTACTAATATTTATTTTGAAAAAGAATTGAAATAAAATAACTTTTTCTTAAAACACTTTTTCTCGACCGAATCTAAATAAATCCTTAGAAATGTCATATTAAGTGTCAAGGACAAGTTAAACCATTAAACCATTAGAGAGAATAAATTGTTACAAAAATTTAATCTATTAATATCATTTTACATTCAAAATTTAAGTTACATTAGAAAACAAATTTTACAAATGTATATGAATTTTGTAACATTAACTAAAAAAAACCAGAACGTTAAAATTTTAAATTTACATTATTATTATTTGACTGATGGAGTAAAGACCCACATCGGAATATCTTGAACTTTTCAAGGCTTTAATTAATTTATTATAAACTTCGGAAAGAAGGGGTGTGGGCAAGTAACCCTACGCGCATTTCTAAACCCTAAACCTTTGAATCAGTGAAAGGGGACGTTCGCCGGAGTTTACCCCTATGGACCTTTAAAAATAAACGCCGATGCACGGCGCGTGGAGCCTTTGAGGTTAGCAGGCGGTGGCCGAGCACCTACGCCAATGGTGGCCTGCGGTTCACTCATATACCTCGCCTCTTAATCACCCCCACCTTTTATTTTGCCCATTTTTTATTTATTCCTTTTTATTTTTTAGACTTCAAAGTCAACTTTTATTTTCTAAATAAAGTTACTTTTATCTCAATTCTACAAGCTTCTTTGAAGACAAAATTTTAAAATTTAAAAGATAAAACTAAAAATTCAAACACCCATTAAATTCTTTTGAAAATTTAAGAACATGTTGAACTCAATTTTAATGTTTCAGGGAGGGTAGTTATACTTCAATTTATAAATAAAACATTAAGTGTATTAATTAATAGGCCATTATTTTTACAATATTAGTTCTTGTGAATGCCTTCTAAAATATGTTGGAAGTTGCCAACAAAATTTGTGCATGTACTAAGGAATCAAGAGGTTATTGATTCAGATTCTCCACCCCTAGTTGCAACGCCTTTTTTTTCTCTTTTTTCTCTTTTTTCTCTTTTTGGTGCATCAAACCCTTTTTAAGCTTTAATTAAGCTAGTATGATTTGTATTTTGAAAAAAAAAAAGATGACAAATATATTATAGTAAACACAGAAATTTGTAGTAGGAAAAAGTGCTTTTGAACTTTGATCATTGTTAAGAGAGCATTTCTCAAACATTTATTTTGCAGAGATTTGAAGTTGAAAGGATGATAAAGAGAATAGAATTTAATGCTGAATTATGTGTATCCCAACAACACTACATTTTAAAAGAACTCCCCAAAGGGCCTTCCTTCAATTCTCTCTTGTTGCTACGTACTCATACAAAAAAAAAAAAAGTTGGGTGATAATGTTTGATTTGACACAAAGCAAAAATTTGACAAAACACAGAAGCTTGGAGAAATGCATTACAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAGGAGCAACAAAGAGAAGGCAAGACGACGGTCGATTGGCGACGTGTCCATTGGTGGGAGCATGGATATGTTCGACGTCTCGAGTTGCCTGAAGATGCTGATTCGTCAAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACGAATCAAGGTAGTGAATCAAAGAGCAAAGATAATTCTGATGAAGATGCTTGAGTTGTTTGTGAGCAAATTTCTAATGATAAATGTGTTTAACTTAAACTTAATTTACATATTGGATGTGATTGTGACAAAACAACAAGAATGGATCTCAAATTGTGTATGTTGTTGTTATTGCTGACCAACTTATGTGGACGAGAATACAAACACTTT

mRNA sequence

TCTTTACATATGTTATAATATTAATAGAGCTCCAAAACACTTCCAAGTTTCTTCTTGCACCCTAGCCACATAGAACTTCCCTCTTCCTTTAGCTATGGCCACTTCAAAACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCGTCAAAATGGAGTGTCTCTTTGGGAGAAGAGGTTTTTAGAAGATTTCTAGGGCAAGCTAATTCAGCTATTCAAAAGGTGTTCGGCGATGGCTCGCTGTTTAGTCCGTTGTTGTTCGGAAAGTTCTTTGATCCCGCTGATGCTTTTCCACTATGGGAGTTTGAGTCTGATCTATTGTTGTCCAACCTTCGTATCTCTGGAAAATCTTCAATAGATTGGTCTCAAACTGATCAAGAGTATGTTCTACAAGCAGAATTACTAGAAGCTTGGAGAAATGCATTACAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAGGAGCAACAAAGAGAAGGCAAGACGACGGTCGATTGGCGACGTGTCCATTGGTGGGAGCATGGATATGTTCGACGTCTCGAGTTGCCTGAAGATGCTGATTCGTCAAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACGAATCAAGGTAGTGAATCAAAGAGCAAAGATAATTCTGATGAAGATGCTTGAGTTGTTTGTGAGCAAATTTCTAATGATAAATGTGTTTAACTTAAACTTAATTTACATATTGGATGTGATTGTGACAAAACAACAAGAATGGATCTCAAATTGTGTATGTTGTTGTTATTGCTGACCAACTTATGTGGACGAGAATACAAACACTTT

Coding sequence (CDS)

ATGGCCACTTCAAAACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCGTCAAAATGGAGTGTCTCTTTGGGAGAAGAGGTTTTTAGAAGATTTCTAGGGCAAGCTAATTCAGCTATTCAAAAGGTGTTCGGCGATGGCTCGCTGTTTAGTCCGTTGTTGTTCGGAAAGTTCTTTGATCCCGCTGATGCTTTTCCACTATGGGAGTTTGAGTCTGATCTATTGTTGTCCAACCTTCGTATCTCTGGAAAATCTTCAATAGATTGGTCTCAAACTGATCAAGAGTATGTTCTACAAGCAGAATTACTAGAAGCTTGGAGAAATGCATTACAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAGGAGCAACAAAGAGAAGGCAAGACGACGGTCGATTGGCGACGTGTCCATTGGTGGGAGCATGGATATGTTCGACGTCTCGAGTTGCCTGAAGATGCTGATTCGTCAAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACGAATCAAGGTAGTGAATCAAAGAGCAAAGATAATTCTGATGAAGATGCTTGA

Protein sequence

MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSKDNSDEDA*

Homology

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BLAST of Cucsa.059700 vs. Swiss-Prot
Match: HS217_ARATH (21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-51
Identity = 97/184 (52.72%), Postives = 134/184 (72.83%), Query Frame = 1


Query: 4   SKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFDPAD 63
           S +LE+H +D  TP KWSV LG++VFRRFL     + + VFG+GSLFSP LFGK+FDP+D
Sbjct: 7   SLKLEIHTDDK-TPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSD 66

Query: 64  AFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEI 123
           AFPLWEFE+++LL++LR  G+  +DWSQTDQ YVL++++    +N +Q+ ++ +G+V+EI
Sbjct: 67  AFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEI 126

Query: 124 SGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIP 183
           SGQ     ++  T  DWR   WWEHGYVRRLELP DAD+   EA + N+     LEI+IP
Sbjct: 127 SGQW-NSNKKAATNSDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIP 186

Query: 184 KLET 185
           K+ +
Sbjct: 187 KINS 188

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BLAST of Cucsa.059700 vs. Swiss-Prot
Match: HS223_ORYSJ (22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica GN=HSP22.3 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-35
Identity = 78/175 (44.57%), Postives = 116/175 (66.29%), Query Frame = 1


Query: 19  KWSVSLGEEVFRRFLGQAN-------SAIQKVFGDGSLFSPLLFGKFFDPADAFPLWEFE 78
           +W +SL E  F  FL           +A + VFG+GSLFSP LFGKFFDPADAFPLWEFE
Sbjct: 20  RWRMSLLENTFSSFLQSIGGGVAADGAAARAVFGEGSLFSPFLFGKFFDPADAFPLWEFE 79

Query: 79  SDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLK--- 138
            ++LL+ LR   ++++DW++TD EY L+A++    +  +++S ++  +V+++SG  +   
Sbjct: 80  PEVLLAALRRGARTTVDWAETDSEYYLRADIPGGRKCDVEVSGDDAMRVVDVSGLWRAAP 139

Query: 139 -EQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKN-DLVLEIKIPK 182
                +G+   DWR   WWEHG+VRR+ELPEDAD  ++EA   + + +LEIK+PK
Sbjct: 140 PPPPPDGR---DWRAGRWWEHGFVRRVELPEDADWRKVEAFFDDGEGLLEIKVPK 191

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BLAST of Cucsa.059700 vs. Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-09
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1


Query: 87  IDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQREGKTTVDWRRVHWW 146
           IDW +T + +VL+A+L    +  +++ + EDG+VL+ISG+   +Q E   T  W RV   
Sbjct: 47  IDWKETPEAHVLKADLPGMKKEEVKVEV-EDGRVLQISGERCREQEEKDDT--WHRVERS 106

Query: 147 EHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSKDNS 197
              ++RR  LPE+A    ++A ++N  VL + +PK E  +    K+ D S
Sbjct: 107 SGKFIRRFRLPENAKMDEVKAMMENG-VLTVVVPKEEEEKKPMVKAIDIS 152

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BLAST of Cucsa.059700 vs. Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 33/97 (34.02%), Postives = 60/97 (61.86%), Query Frame = 1


Query: 87  IDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQREGKTTVDWRRVHWW 146
           IDW +T Q +V +A+L    +  +++ + E+GKVL+ISG+  +++ E      W RV + 
Sbjct: 54  IDWKETPQAHVFKADLPGLKKEEVKVEV-EEGKVLQISGERNKEKEEKNN--KWHRVEFS 113

Query: 147 EHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLE 184
              ++RR  LPE+A+   ++A ++N  VL + +PK+E
Sbjct: 114 SGKFLRRFRLPENANVDEVKAGMENG-VLTVTVPKVE 146

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BLAST of Cucsa.059700 vs. Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-08
Identity = 39/128 (30.47%), Postives = 67/128 (52.34%), Query Frame = 1


Query: 59  FDPADAFPLWEFESDLLL---SNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIE 118
           +DP D FP       L     S+      + IDW +T + +V +A++    +  +++ + 
Sbjct: 18  WDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEV- 77

Query: 119 EDGKVLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVL 178
           EDG VL+ISG+  ++Q E   T  W RV      ++RR  LPE+    +++A ++N  VL
Sbjct: 78  EDGNVLQISGERIKEQEE--KTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENG-VL 137

Query: 179 EIKIPKLE 184
            + +PK E
Sbjct: 138 TVTVPKEE 141

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BLAST of Cucsa.059700 vs. TrEMBL
Match: A0A0A0L6D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081340 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQGSESKSKDNSDEDA
Sbjct: 181 KLETNQGSESKSKDNSDEDA 200

[Close]

BLAST of Cucsa.059700 vs. TrEMBL
Match: H6TB45_CITLA (HSP23.0 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.4e-96
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 1


Query: 1   MATSKQ-LEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60
           MATSKQ LEVHKEDH TPSKWSVSLGEEVFR+F+GQANSA+Q VFGDGSLFSPLLFGKFF
Sbjct: 1   MATSKQQLEVHKEDHHTPSKWSVSLGEEVFRKFVGQANSAVQTVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120
           DPADAFPLWEFESDLLLSNLRISGKSS+DW QTDQEY LQAELLEAWRNALQISI EDGK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSVDWFQTDQEYGLQAELLEAWRNALQISI-EDGK 120

Query: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180
           VLEISGQLKEQQREG+TT DWR V+WWEHGYVRRLELPEDAD SRMEAR+KND VLEIKI
Sbjct: 121 VLEISGQLKEQQREGRTTFDWRSVNWWEHGYVRRLELPEDADWSRMEARMKNDHVLEIKI 180

Query: 181 PKLETNQGSESKSKDNSDEDA 201
           PK ETN+G ES SKDNSDEDA
Sbjct: 181 PKSETNEGVESNSKDNSDEDA 200

[Close]

BLAST of Cucsa.059700 vs. TrEMBL
Match: V4UMA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009527mg PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           M +  +LEVH +D  TP KW V+LGE+VFRRFL Q N A+ K FGDGSLFSPLLFGKFFD
Sbjct: 1   MTSCIKLEVHTDDR-TPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLS+L+ +G+SS+DW QTDQ YVL+AEL    +N +Q+S+ E+GK+
Sbjct: 61  PSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSV-ENGKI 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ KEQ+       DWR  HWWEHG+VRRLELPEDAD  + EA + ND+ LEI+IP
Sbjct: 121 VEISGQWKEQR--DPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 177

Query: 181 K 182
           K
Sbjct: 181 K 177

[Close]

BLAST of Cucsa.059700 vs. TrEMBL
Match: V4US93_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009527mg PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           M +  +LEVH +D  TP KW V+LGE+VFRRFL Q N A+ K FGDGSLFSPLLFGKFFD
Sbjct: 1   MTSCIKLEVHTDDR-TPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLS+L+ +G+SS+DW QTDQ YVL+AEL    +N +Q+S+ E+GK+
Sbjct: 61  PSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSV-ENGKI 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ KEQ+       DWR  HWWEHG+VRRLELPEDAD  + EA + ND+ LEI+IP
Sbjct: 121 VEISGQWKEQR--DPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 177

Query: 181 K 182
           K
Sbjct: 181 K 177

[Close]

BLAST of Cucsa.059700 vs. TrEMBL
Match: A0A067E565_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028228mg PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           M +  +LEVH +D  TP KW V+LGE+VFRRFL Q N A+ K FGDGSLFSPLLFGKFFD
Sbjct: 1   MTSCIKLEVHTDDR-TPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLS+L+ +G+SS+DW QTDQ YVL+AEL    +N +Q+S+ E+GK+
Sbjct: 61  PSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSV-ENGKI 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ KEQ+       DWR  HWWEHG+VRRLELPEDAD  + EA + ND+ LEI+IP
Sbjct: 121 VEISGQWKEQR--DPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 177

Query: 181 K 182
           K
Sbjct: 181 K 177

[Close]

BLAST of Cucsa.059700 vs. TAIR10
Match: AT5G54660.1 (AT5G54660.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-52
Identity = 97/184 (52.72%), Postives = 134/184 (72.83%), Query Frame = 1


Query: 4   SKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFDPAD 63
           S +LE+H +D  TP KWSV LG++VFRRFL     + + VFG+GSLFSP LFGK+FDP+D
Sbjct: 7   SLKLEIHTDDK-TPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSD 66

Query: 64  AFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEI 123
           AFPLWEFE+++LL++LR  G+  +DWSQTDQ YVL++++    +N +Q+ ++ +G+V+EI
Sbjct: 67  AFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEI 126

Query: 124 SGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIP 183
           SGQ     ++  T  DWR   WWEHGYVRRLELP DAD+   EA + N+     LEI+IP
Sbjct: 127 SGQW-NSNKKAATNSDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIP 186

Query: 184 KLET 185
           K+ +
Sbjct: 187 KINS 188

[Close]

BLAST of Cucsa.059700 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-09
Identity = 34/112 (30.36%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 85  SSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQREGKTTVDWRRVH 144
           + +DW +T + +V +A++    +  +++ + EDG +L+ISG+   +  E   T  W RV 
Sbjct: 49  AKVDWRETPEAHVFKADVPGLKKEEVKVEV-EDGNILQISGERSSENEEKSDT--WHRVE 108

Query: 145 WWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSKDNS 197
                ++RR  LPE+A    ++A ++N  VL + +PK++ ++  E KS D S
Sbjct: 109 RSSGKFMRRFRLPENAKVEEVKASMENG-VLSVTVPKVQESK-PEVKSVDIS 155

[Close]

BLAST of Cucsa.059700 vs. NCBI nr
Match: gi|449470421|ref|XP_004152915.1| (PREDICTED: 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 6.6e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQGSESKSKDNSDEDA
Sbjct: 181 KLETNQGSESKSKDNSDEDA 200

[Close]

BLAST of Cucsa.059700 vs. NCBI nr
Match: gi|659126952|ref|XP_008463443.1| (PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 3.7e-105
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MAT KQLEVHKEDH TPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATPKQLEVHKEDHSTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEY+LQAELLEAWRNALQISIEE GKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYILQAELLEAWRNALQISIEEGGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQL+EQQREGKTTVDWRRV+WWEHG+VRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLREQQREGKTTVDWRRVNWWEHGFVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQ SESKSKDNSDEDA
Sbjct: 181 KLETNQSSESKSKDNSDEDA 200

[Close]

BLAST of Cucsa.059700 vs. NCBI nr
Match: gi|315932724|gb|ADU55792.1| (HSP23.0 [Citrullus lanatus])

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 1


Query: 1   MATSKQ-LEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60
           MATSKQ LEVHKEDH TPSKWSVSLGEEVFR+F+GQANSA+Q VFGDGSLFSPLLFGKFF
Sbjct: 1   MATSKQQLEVHKEDHHTPSKWSVSLGEEVFRKFVGQANSAVQTVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120
           DPADAFPLWEFESDLLLSNLRISGKSS+DW QTDQEY LQAELLEAWRNALQISI EDGK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSVDWFQTDQEYGLQAELLEAWRNALQISI-EDGK 120

Query: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180
           VLEISGQLKEQQREG+TT DWR V+WWEHGYVRRLELPEDAD SRMEAR+KND VLEIKI
Sbjct: 121 VLEISGQLKEQQREGRTTFDWRSVNWWEHGYVRRLELPEDADWSRMEARMKNDHVLEIKI 180

Query: 181 PKLETNQGSESKSKDNSDEDA 201
           PK ETN+G ES SKDNSDEDA
Sbjct: 181 PKSETNEGVESNSKDNSDEDA 200

[Close]

BLAST of Cucsa.059700 vs. NCBI nr
Match: gi|641827187|gb|KDO46381.1| (hypothetical protein CISIN_1g028228mg [Citrus sinensis])

HSP 1 Score: 236.1 bits (601), Expect = 5.3e-59
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           M +  +LEVH +D  TP KW V+LGE+VFRRFL Q N A+ K FGDGSLFSPLLFGKFFD
Sbjct: 1   MTSCIKLEVHTDDR-TPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLS+L+ +G+SS+DW QTDQ YVL+AEL    +N +Q+S+ E+GK+
Sbjct: 61  PSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSV-ENGKI 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ KEQ+       DWR  HWWEHG+VRRLELPEDAD  + EA + ND+ LEI+IP
Sbjct: 121 VEISGQWKEQR--DPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 177

Query: 181 K 182
           K
Sbjct: 181 K 177

[Close]

BLAST of Cucsa.059700 vs. NCBI nr
Match: gi|567920270|ref|XP_006452141.1| (hypothetical protein CICLE_v10009527mg [Citrus clementina])

HSP 1 Score: 236.1 bits (601), Expect = 5.3e-59
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = 1


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           M +  +LEVH +D  TP KW V+LGE+VFRRFL Q N A+ K FGDGSLFSPLLFGKFFD
Sbjct: 1   MTSCIKLEVHTDDR-TPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLS+L+ +G+SS+DW QTDQ YVL+AEL    +N +Q+S+ E+GK+
Sbjct: 61  PSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSV-ENGKI 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ KEQ+       DWR  HWWEHG+VRRLELPEDAD  + EA + ND+ LEI+IP
Sbjct: 121 VEISGQWKEQR--DPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 177

Query: 181 K 182
           K
Sbjct: 181 K 177

The following BLAST results are available for this feature:

BLAST of Cucsa.059700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS217_ARATH	6.9e-51	52.72	21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=...	[more]
HS223_ORYSJ	2.4e-35	44.57	22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica GN=HSP22.3 ...	[more]
HSP11_HELAN	6.6e-09	34.55	17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1	[more]
HSP12_DAUCA	1.1e-08	34.02	18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HS174_ORYSJ	2.5e-08	30.47	17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 P...	[more]

BLAST of Cucsa.059700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6D5_CUCSA	4.6e-110	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081340 PE=3 SV=1	[more]
H6TB45_CITLA	8.4e-96	89.55	HSP23.0 OS=Citrullus lanatus PE=2 SV=1	[more]
V4UMA5_9ROSI	3.7e-59	64.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009527mg PE=3 SV=1	[more]
V4US93_9ROSI	3.7e-59	64.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009527mg PE=3 SV=1	[more]
A0A067E565_CITSI	3.7e-59	64.09	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028228mg PE=3 SV=1	[more]

BLAST of Cucsa.059700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54660.1	3.9e-52	52.72	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	5.3e-09	30.36	heat shock protein 17.4	[more]

BLAST of Cucsa.059700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470421\|ref\|XP_004152915.1\|	6.6e-110	100.00	PREDICTED: 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus]	[more]
gi\|659126952\|ref\|XP_008463443.1\|	3.7e-105	96.00	PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo]	[more]
gi\|315932724\|gb\|ADU55792.1\|	1.2e-95	89.55	HSP23.0 [Citrullus lanatus]	[more]
gi\|641827187\|gb\|KDO46381.1\|	5.3e-59	64.09	hypothetical protein CISIN_1g028228mg [Citrus sinensis]	[more]
gi\|567920270\|ref\|XP_006452141.1\|	5.3e-59	64.09	hypothetical protein CICLE_v10009527mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.059700.1	Cucsa.059700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 88..187 score: 2.
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 88..181 score: 14
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 75..187 score: 5.7
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 52..186 score: 1.01
None	No IPR available	PANTHER	PTHR11527:SF5	21.7 KDA CLASS VI HEAT SHOCK PROTEIN	coord: 1..200 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.059700	Cla005275	Watermelon (97103) v1	cgywmB048
Cucsa.059700	Csa3G081340	Cucumber (Chinese Long) v2	cgycuB044
Cucsa.059700	MELO3C025424	Melon (DHL92) v3.5.1	cgymeB048
Cucsa.059700	ClCG10G005700	Watermelon (Charleston Gray)	cgywcgB049
Cucsa.059700	CSPI03G05380	Wild cucumber (PI 183967)	cgycpiB044
Cucsa.059700	CmaCh16G008470	Cucurbita maxima (Rimu)	cgycmaB0080
Cucsa.059700	CmoCh16G009150	Cucurbita moschata (Rifu)	cgycmoB0075
Cucsa.059700	Lsi05G006280	Bottle gourd (USVL1VR-Ls)	cgylsiB048
Cucsa.059700	Cp4.1LG00g00140	Cucurbita pepo (Zucchini)	cgycpeB0076
Cucsa.059700	MELO3C025424.2	Melon (DHL92) v3.6.1	cgymedB047
Cucsa.059700	CsaV3_3G005420	Cucumber (Chinese Long) v3	cgycucB046
Cucsa.059700	Cla97C10G189920	Watermelon (97103) v2	cgywmbB048
Cucsa.059700	Bhi11G000520	Wax gourd	cgywgoB049
Cucsa.059700	Carg24823	Silver-seed gourd	carcgyB0904

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.059700	Cucurbita maxima (Rimu)	cgycmaB0081
Cucsa.059700	Cucurbita moschata (Rifu)	cgycmoB0076
Cucsa.059700	Cucurbita pepo (Zucchini)	cgycpeB0077
Cucsa.059700	Silver-seed gourd	carcgyB0738