CsGy3G005480 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G005480
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	21.7 kDa class VI heat shock protein
Location	Chr3 : 4411450 .. 4414874 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGATGTTGACTTTACATTTGAAAGAAAATGACACCATATTCTAACTTTAGCTAGGGTTGGAGGTTGTAGGGCTTTTTATTTGCTTTTATCTTCCCCAAAAAGGTAAATTTTTCTACCACATCAAGATAATGGCATCTAAGGCAAAGTTGAGAACCCAAATATGCCCTGCCACATTATCACCTCGCCACTAACCCAAGAAAAAAAAAAAAGACAACCAAAAGCAAGATTCCAATTGCCTTTACAGCCCTCTAAATATTCCCAAAGCATTTTCTCTTGTGCAATGCCATTCTTTTCTATCACCCTTTGTCTTTACATATGTTATAATATTAATAGAGCTCCAAAACACTTCCAAGTTTCTTCTTGCACCCTAGCCACATAGAACTTCCCTCTTCCTTTAGCTATGGCCACTTCAAAACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCGTCAAAATGGAGTGTCTCTTTGGGAGAAGAGGTTTTTAGAAGATTTCTAGGGCAAGCTAATTCAGCTATTCAAAAGGTGTTCGGCGATGGCTCGCTGTTTAGTCCGTTGTTGTTCGGAAAGTTCTTTGATCCCGCTGATGCTTTTCCACTATGGGAGTTTGAGTCTGATCTATTGTTGTCCAACCTTCGTATCTCTGGAAAATCTTCAATAGATTGGTCTCAAACTGATCAAGAGTATGTTCTACAAGCAGAATTACTAGGTATTTGATATTTTCCACTTATTCTTTCATCTTTCCTTTCCACCGCTTTCAACACCTTCTGCATAATTTGAACTATAGACCTCTTGGTTGTTATATAATTTAACTTGTGTAATCTTTCATAGTTTACTTGGCATGTAGTTTCAAAGCTTTAAGAATCTGACATTAAAATTACATTAATTTTATAAAAAAAAGGTGTAAGGGAAAATTTTCCACAAAGTTATACATGTGACTAAACTTTGGTAAATGAAAGTGCATTTAAATTTAGGGTTAAGCAAGAGAATATACAACGAAAGGATATTGGAATAAATGAATTTAAGGTGCTTAAGAAATGGTTAAAATCACTCCTCCATTTTAAAATCAATCTAATTTTTTTTAACGATTTTAAATCAATTTTAATAATATAAAGGTGTGCAAATTGAAACTTGAAATTGATTTTGATTTTGAGTGATTAAAGCTTCGAATCTATATATATATATATACTATGAACAAAATACTTATAGCAAAAGGCAACAAAAATTGCTTTGATCCCATGTTGTTTATGAGGATGTTTGAATTGTTAACAATTTCATATAGAACAAATTTAGTTATATATGTATTTTTAAATTTGTAAAATTTAATCTTTATTGAAAAAGATTTTATCAATATTAATATATCGGTTTTTATTGTTTTAGAATTTAGAGTTTGTAGCTTCTAAACATGTTTTCCCTAATTAGTTTATTTACTAATATTTATTTTGAAAAAGAATTGAAATAAAATAACTTTTTCTTAAAACACTTTTTCTCGACCGAATCTAAATAAATCCTTAGAAATGTCATATTAAGTGTCAAGGACAAGTTAAACCATTAAACCATTAGAGAGAATAAATTGTTACAAAAATTTAATCTATTAATATCATTTTACATTCAAAATTTAAGTTACATTAGAAAACAAATTTTACAAATGTATATGAATTTTGTAACATTAACTAAAAAAAACCAGAACGTTAAAATTTTAAATTTACATTATTATTATTTGACTGATGGAGTAAAGACCCACATCGGAAATATCTTGAACTTTTCAAGGCTTTAATTAATTTATTATAAACTTCGGAAAGAAGGGGTGTGGGCAAGTAACCCTACGCGCATTTCTAAACCCTAAACCTTTGAATCAGTGAAAGGGGACGTTCGCCGGAGTTTACCCCTATGGACCTTTAAAAATAAACGCCGATGCACGGCGCGTGGAGCCTTTGAGGTTAGCAGGCGGTGGCCGAGCACCTACGCCAATGGTGGCCTGCGGTTCACTCATATACCTCGCCTCTTAATCACCCCCACCTTTTATTTTGCCCATTTTTTATTTATTCCTTTTTATTTTTTAGACTTCAAAGTCAACTTTTATTTTCTAAATAAAGTTACTTTTATCTCAATTCTACAAGCTTCTTTGAAGACAAAATTTTAAAATTTAAAAGATAAAACTAAAAATTCAAACACCCATTAAATTCTTTTGAAAATTTAAGAACATGTTGAACTCAATTTTAATGTTTCAGGGAGGGTAGTTATACTTCAATTTATAAATAAAACATTAAGTGTATTAATTAATAGGCCATTATTTTTACAATATTAGTTCTTGTGAATGCCTTCTAAAATATGTTGGAAGTTGCCAACAAAATTTGTGCATGTACTAAGGAATCAAGAGGTTATTGATTCAGATTCTCCACCCCTAGTTGCAACGCCTTTTTTTTCTCTTTTTTCTCTTTTTTCTCTTTTTGGTGCATCAAACCCTTTTTAAGCTTTAATTAAGCTAGTATGATTTGTATTTTGAAAAAAAAAAGATGACAAATATATTATAGTAAACACAGAAATTTGTAGTAGGAAAAAGTGCTTTTGAACTTTGATCATTGTTAAGAGAGCATTTCTCAAACATTTATTTTGCAGAGATTTGAAGTTGAAAGGATGATAAAGAGAATAGAATTTAATGCTGAATTATGTGTATCCCAACAACACTACATTTTAAAAGAACTCCCCAAAGGGCCTTCCTTCAATTCTCTCTTGTTGCTACGTACTCATACAAAAAAAAAAAAAAAAAGTTGGGTGATAATGTTTGATTTGACACAAAGCAAAAATTTGACAAAACACAGAAGCTTGGAGAAATGCATTACAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAGGAGCAACAAAGAGAAGGCAAGACGACGGTCGATTGGCGACGTGTCCATTGGTGGGAGCATGGATATGTTCGACGTCTCGAGTTGCCTGAAGATGCTGATTCGTCAAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACGAATCAAGGTAGTGAATCAAAGAGCAAAGATAATTCTGATGAAGATGCTTGAGTTGTTTGTGAGCAAATTTCTAATGATAAATGTGTTTAACTTAAACTTAATTTACATATTGGATGTGATTGTGACAAAACAACAAGAATGGATCTCAAATTGTGTATGTTGTTGTTATTGCTGACCAACTTATGTGGACGAGAATACAAACACTTTCAAAATGTCTTGTATAGAATTTTCATTTCATGATTTTTATATCACCAATACATACATTTATGATCAATAATGAGCGAGGGATTTGAAGGATTGTAATTTAATTAACCTTTAAAGTGATAAATATAACTATAAAATTAAGTATTGAAGAGC

mRNA sequence

GATTGATGTTGACTTTACATTTGAAAGAAAATGACACCATATTCTAACTTTAGCTAGGGTTGGAGGTTGTAGGGCTTTTTATTTGCTTTTATCTTCCCCAAAAAGGTAAATTTTTCTACCACATCAAGATAATGGCATCTAAGGCAAAGTTGAGAACCCAAATATGCCCTGCCACATTATCACCTCGCCACTAACCCAAGAAAAAAAAAAAAGACAACCAAAAGCAAGATTCCAATTGCCTTTACAGCCCTCTAAATATTCCCAAAGCATTTTCTCTTGTGCAATGCCATTCTTTTCTATCACCCTTTGTCTTTACATATGTTATAATATTAATAGAGCTCCAAAACACTTCCAAGTTTCTTCTTGCACCCTAGCCACATAGAACTTCCCTCTTCCTTTAGCTATGGCCACTTCAAAACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCGTCAAAATGGAGTGTCTCTTTGGGAGAAGAGGTTTTTAGAAGATTTCTAGGGCAAGCTAATTCAGCTATTCAAAAGGTGTTCGGCGATGGCTCGCTGTTTAGTCCGTTGTTGTTCGGAAAGTTCTTTGATCCCGCTGATGCTTTTCCACTATGGGAGTTTGAGTCTGATCTATTGTTGTCCAACCTTCGTATCTCTGGAAAATCTTCAATAGATTGGTCTCAAACTGATCAAGAGTATGTTCTACAAGCAGAATTACTAGAAGCTTGGAGAAATGCATTACAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAGGAGCAACAAAGAGAAGGCAAGACGACGGTCGATTGGCGACGTGTCCATTGGTGGGAGCATGGATATGTTCGACGTCTCGAGTTGCCTGAAGATGCTGATTCGTCAAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACGAATCAAGGTAGTGAATCAAAGAGCAAAGATAATTCTGATGAAGATGCTTGAGTTGTTTGTGAGCAAATTTCTAATGATAAATGTGTTTAACTTAAACTTAATTTACATATTGGATGTGATTGTGACAAAACAACAAGAATGGATCTCAAATTGTGTATGTTGTTGTTATTGCTGACCAACTTATGTGGACGAGAATACAAACACTTTCAAAATGTCTTGTATAGAATTTTCATTTCATGATTTTTATATCACCAATACATACATTTATGATCAATAATGAGCGAGGGATTTGAAGGATTGTAATTTAATTAACCTTTAAAGTGATAAATATAACTATAAAATTAAGTATTGAAGAGC

Coding sequence (CDS)

ATGGCCACTTCAAAACAACTAGAAGTCCATAAAGAAGATCACCCTACTCCGTCAAAATGGAGTGTCTCTTTGGGAGAAGAGGTTTTTAGAAGATTTCTAGGGCAAGCTAATTCAGCTATTCAAAAGGTGTTCGGCGATGGCTCGCTGTTTAGTCCGTTGTTGTTCGGAAAGTTCTTTGATCCCGCTGATGCTTTTCCACTATGGGAGTTTGAGTCTGATCTATTGTTGTCCAACCTTCGTATCTCTGGAAAATCTTCAATAGATTGGTCTCAAACTGATCAAGAGTATGTTCTACAAGCAGAATTACTAGAAGCTTGGAGAAATGCATTACAAATCTCCATAGAAGAAGATGGGAAGGTGTTAGAGATAAGTGGTCAATTGAAGGAGCAACAAAGAGAAGGCAAGACGACGGTCGATTGGCGACGTGTCCATTGGTGGGAGCATGGATATGTTCGACGTCTCGAGTTGCCTGAAGATGCTGATTCGTCAAGAATGGAGGCTCGTATCAAGAATGACTTGGTTCTTGAGATCAAAATTCCCAAGTTAGAAACGAATCAAGGTAGTGAATCAAAGAGCAAAGATAATTCTGATGAAGATGCTTGA

Protein sequence

MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFDPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSKDNSDEDA

Homology

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BLAST of CsGy3G005480 vs. NCBI nr
Match: XP_004152915.1 (PREDICTED: 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus] >KGN56157.1 hypothetical protein Csa_3G081340 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 8.3e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQGSESKSKDNSDEDA
Sbjct: 181 KLETNQGSESKSKDNSDEDA 200

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BLAST of CsGy3G005480 vs. NCBI nr
Match: XP_008463443.1 (PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 4.7e-104
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MAT KQLEVHKEDH TPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATPKQLEVHKEDHSTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEY+LQAELLEAWRNALQISIEE GKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYILQAELLEAWRNALQISIEEGGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQL+EQQREGKTTVDWRRV+WWEHG+VRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLREQQREGKTTVDWRRVNWWEHGFVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQ SESKSKDNSDEDA
Sbjct: 181 KLETNQSSESKSKDNSDEDA 200

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BLAST of CsGy3G005480 vs. NCBI nr
Match: ADU55792.1 (HSP23.0 [Citrullus lanatus])

HSP 1 Score: 355.5 bits (911), Expect = 1.2e-94
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MATSK-QLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60
           MATSK QLEVHKEDH TPSKWSVSLGEEVFR+F+GQANSA+Q VFGDGSLFSPLLFGKFF
Sbjct: 1   MATSKQQLEVHKEDHHTPSKWSVSLGEEVFRKFVGQANSAVQTVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120
           DPADAFPLWEFESDLLLSNLRISGKSS+DW QTDQEY LQAELLEAWRNALQISI EDGK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSVDWFQTDQEYGLQAELLEAWRNALQISI-EDGK 120

Query: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180
           VLEISGQLKEQQREG+TT DWR V+WWEHGYVRRLELPEDAD SRMEAR+KND VLEIKI
Sbjct: 121 VLEISGQLKEQQREGRTTFDWRSVNWWEHGYVRRLELPEDADWSRMEARMKNDHVLEIKI 180

Query: 181 PKLETNQGSESKSKDNSDEDA 201
           PK ETN+G ES SKDNSDEDA
Sbjct: 181 PKSETNEGVESNSKDNSDEDA 200

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BLAST of CsGy3G005480 vs. NCBI nr
Match: XP_022154944.1 (21.7 kDa class VI heat shock protein [Momordica charantia])

HSP 1 Score: 320.5 bits (820), Expect = 4.1e-84
Identity = 161/198 (81.31%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MATSKQLEVH+EDH TPSKWSVSLGEE FRRFLGQAN  +QKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATSKQLEVHREDH-TPSKWSVSLGEEAFRRFLGQANPVVQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLR SGKS+IDW Q DQEYVLQAEL EA RN +QI I E+GKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRNSGKSTIDWFQIDQEYVLQAELPEAVRNTMQIFI-ENGKV 120

Query: 121 LEISGQLK-EQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180
           LEISGQLK +QQRE KT +DWR V+WWEHGYVRRLELP+DAD  RMEAR+KND+V+E+KI
Sbjct: 121 LEISGQLKQQQQRESKTIIDWRSVNWWEHGYVRRLELPDDADWRRMEARVKNDMVIEVKI 180

Query: 181 PKLETNQGSESKSKDNSD 198
           PKLE NQ +ESK+KD+ D
Sbjct: 181 PKLEANQSAESKNKDSED 196

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BLAST of CsGy3G005480 vs. NCBI nr
Match: XP_022985262.1 (21.7 kDa class VI heat shock protein [Cucurbita maxima])

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 159/200 (79.50%), Postives = 176/200 (88.00%), Query Frame = 0


Query: 1   MATSK-QLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60
           MATSK QLEVHK DH +PSKWSV+LGEEVF +F+GQ NS +QKV G+GSLFSPLLFGKFF
Sbjct: 25  MATSKPQLEVHKADH-SPSKWSVALGEEVFSKFVGQPNSGVQKVLGEGSLFSPLLFGKFF 84

Query: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120
           DPADAFPLWEFESDLL+S LR SGKSSIDW QTDQEYVLQAEL E WRNALQIS+ EDGK
Sbjct: 85  DPADAFPLWEFESDLLMSALRSSGKSSIDWFQTDQEYVLQAELQEPWRNALQISV-EDGK 144

Query: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180
           VLEISGQLKEQQRE    VDWR  +WWEHG+VRRLELPED D  R+EAR+KND +LEIKI
Sbjct: 145 VLEISGQLKEQQREATKLVDWRCANWWEHGFVRRLELPEDVDCCRIEARMKNDTILEIKI 204

Query: 181 PKLETNQGSESKSKDNSDED 200
           PKLETN+G++SKSKD SD+D
Sbjct: 205 PKLETNRGADSKSKD-SDQD 221

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BLAST of CsGy3G005480 vs. TAIR10
Match: AT5G54660.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-52
Identity = 97/184 (52.72%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 4   SKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFDPAD 63
           S +LE+H +D  TP KWSV LG++VFRRFL     + + VFG+GSLFSP LFGK+FDP+D
Sbjct: 7   SLKLEIHTDD-KTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSD 66

Query: 64  AFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEI 123
           AFPLWEFE+++LL++LR  G+  +DWSQTDQ YVL++++    +N +Q+ ++ +G+V+EI
Sbjct: 67  AFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEI 126

Query: 124 SGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIP 183
           SGQ     ++  T  DWR   WWEHGYVRRLELP DAD+   EA + N+     LEI+IP
Sbjct: 127 SGQW-NSNKKAATNSDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIP 186

Query: 184 KLET 185
           K+ +
Sbjct: 187 KINS 188

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BLAST of CsGy3G005480 vs. Swiss-Prot
Match: sp|Q9FIT9|HS217_ARATH (21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP21.7 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.4e-51
Identity = 97/184 (52.72%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 4   SKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFDPAD 63
           S +LE+H +D  TP KWSV LG++VFRRFL     + + VFG+GSLFSP LFGK+FDP+D
Sbjct: 7   SLKLEIHTDD-KTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSD 66

Query: 64  AFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEI 123
           AFPLWEFE+++LL++LR  G+  +DWSQTDQ YVL++++    +N +Q+ ++ +G+V+EI
Sbjct: 67  AFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEI 126

Query: 124 SGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKND---LVLEIKIP 183
           SGQ     ++  T  DWR   WWEHGYVRRLELP DAD+   EA + N+     LEI+IP
Sbjct: 127 SGQW-NSNKKAATNSDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIP 186

Query: 184 KLET 185
           K+ +
Sbjct: 187 KINS 188

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BLAST of CsGy3G005480 vs. Swiss-Prot
Match: sp|Q6AUW3|HS223_ORYSJ (22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP22.3 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 19  KWSVSLGEEVFRRFL-------GQANSAIQKVFGDGSLFSPLLFGKFFDPADAFPLWEFE 78
           +W +SL E  F  FL           +A + VFG+GSLFSP LFGKFFDPADAFPLWEFE
Sbjct: 20  RWRMSLLENTFSSFLQSIGGGVAADGAAARAVFGEGSLFSPFLFGKFFDPADAFPLWEFE 79

Query: 79  SDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQ 138
            ++LL+ LR   ++++DW++TD EY L+A++    +  +++S ++  +V+++SG  +   
Sbjct: 80  PEVLLAALRRGARTTVDWAETDSEYYLRADIPGGRKCDVEVSGDDAMRVVDVSGLWRAXX 139

Query: 139 REGKTT-VDWRRVHWWEHGYVRRLELPEDADSSRMEARIKN-DLVLEIKIPK 182
                   DWR   WWEHG+VRR+ELPEDAD  ++EA   + + +LEIK+PK
Sbjct: 140 XXXXXXGRDWRAGRWWEHGFVRRVELPEDADWRKVEAFFDDGEGLLEIKVPK 191

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BLAST of CsGy3G005480 vs. Swiss-Prot
Match: sp|P30693|HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.6e-08
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 87  IDWSQTDQEYVLQAELLEAWRNALQISIEEDGKVLEISGQLKEQQREGKTTVDWRRVHWW 146
           IDW +T + +VL+A+L    +  +++ + EDG+VL+ISG+   +Q E   T  W RV   
Sbjct: 47  IDWKETPEAHVLKADLPGMKKEEVKVEV-EDGRVLQISGERCREQEEKDDT--WHRVERS 106

Query: 147 EHGYVRRLELPEDADSSRMEARIKNDLVLEIKIPKLETNQGSESKSKDNS 197
              ++RR  LPE+A    ++A ++N  VL + +PK E  +    K+ D S
Sbjct: 107 SGKFIRRFRLPENAKMDEVKAMMENG-VLTVVVPKEEEEKKPMVKAIDIS 152

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BLAST of CsGy3G005480 vs. TrEMBL
Match: tr|A0A0A0L6D5|A0A0A0L6D5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081340 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.5e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQGSESKSKDNSDEDA
Sbjct: 181 KLETNQGSESKSKDNSDEDA 200

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BLAST of CsGy3G005480 vs. TrEMBL
Match: tr|A0A1S3CJA6|A0A1S3CJA6_CUCME (21.7 kDa class VI heat shock protein OS=Cucumis melo OX=3656 GN=LOC103501614 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.1e-104
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MAT KQLEVHKEDH TPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD
Sbjct: 1   MATPKQLEVHKEDHSTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEY+LQAELLEAWRNALQISIEE GKV
Sbjct: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYILQAELLEAWRNALQISIEEGGKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           LEISGQL+EQQREGKTTVDWRRV+WWEHG+VRRLELPEDADSSRMEARIKNDLVLEIKIP
Sbjct: 121 LEISGQLREQQREGKTTVDWRRVNWWEHGFVRRLELPEDADSSRMEARIKNDLVLEIKIP 180

Query: 181 KLETNQGSESKSKDNSDEDA 201
           KLETNQ SESKSKDNSDEDA
Sbjct: 181 KLETNQSSESKSKDNSDEDA 200

[Close]

BLAST of CsGy3G005480 vs. TrEMBL
Match: tr|H6TB45|H6TB45_CITLA (HSP23.0 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 7.7e-95
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MATSK-QLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFF 60
           MATSK QLEVHKEDH TPSKWSVSLGEEVFR+F+GQANSA+Q VFGDGSLFSPLLFGKFF
Sbjct: 1   MATSKQQLEVHKEDHHTPSKWSVSLGEEVFRKFVGQANSAVQTVFGDGSLFSPLLFGKFF 60

Query: 61  DPADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGK 120
           DPADAFPLWEFESDLLLSNLRISGKSS+DW QTDQEY LQAELLEAWRNALQISI EDGK
Sbjct: 61  DPADAFPLWEFESDLLLSNLRISGKSSVDWFQTDQEYGLQAELLEAWRNALQISI-EDGK 120

Query: 121 VLEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKI 180
           VLEISGQLKEQQREG+TT DWR V+WWEHGYVRRLELPEDAD SRMEAR+KND VLEIKI
Sbjct: 121 VLEISGQLKEQQREGRTTFDWRSVNWWEHGYVRRLELPEDADWSRMEARMKNDHVLEIKI 180

Query: 181 PKLETNQGSESKSKDNSDEDA 201
           PK ETN+G ES SKDNSDEDA
Sbjct: 181 PKSETNEGVESNSKDNSDEDA 200

[Close]

BLAST of CsGy3G005480 vs. TrEMBL
Match: tr|A0A2P4LLZ6|A0A2P4LLZ6_QUESU (21.7 kDa class vi heat shock protein OS=Quercus suber OX=58331 GN=CFP56_51576 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.3e-61
Identity = 124/199 (62.31%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           MA+ KQLEVH  D  TP KW +SLGEEVF+RF+ Q +  + KVF +GSLFSPLLFGKFFD
Sbjct: 1   MASRKQLEVHSGDQ-TPQKWCISLGEEVFKRFIFQGSPTVHKVFNEGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLSNLR SG+S++DWSQTDQ+YVL+AEL     N +Q+ +E+ GKV
Sbjct: 61  PSDAFPLWEFESDVLLSNLRSSGQSTVDWSQTDQDYVLKAELPGVGNN-VQVCVEK-GKV 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ K QQRE KT  DWR  HWWE+GYVRR+ELPEDAD  R+EA + ND+++E++IP
Sbjct: 121 VEISGQWK-QQRESKTK-DWRSGHWWEYGYVRRIELPEDADWRRIEASVSNDILIEVRIP 180

Query: 181 KL----ETNQGSESKSKDN 196
           K     + +QG+++  KD+
Sbjct: 181 KNLMVGDASQGNDAARKDS 194

[Close]

BLAST of CsGy3G005480 vs. TrEMBL
Match: tr|V4UMA5|V4UMA5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009527mg PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.0e-59
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = 0


Query: 1   MATSKQLEVHKEDHPTPSKWSVSLGEEVFRRFLGQANSAIQKVFGDGSLFSPLLFGKFFD 60
           M +  +LEVH +D  TP KW V+LGE+VFRRFL Q N A+ K FGDGSLFSPLLFGKFFD
Sbjct: 1   MTSCIKLEVHTDDR-TPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFD 60

Query: 61  PADAFPLWEFESDLLLSNLRISGKSSIDWSQTDQEYVLQAELLEAWRNALQISIEEDGKV 120
           P+DAFPLWEFESD+LLS+L+ +G+SS+DW QTDQ YVL+AEL    +N +Q+S+ E+GK+
Sbjct: 61  PSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSV-ENGKI 120

Query: 121 LEISGQLKEQQREGKTTVDWRRVHWWEHGYVRRLELPEDADSSRMEARIKNDLVLEIKIP 180
           +EISGQ KEQ+       DWR  HWWEHG+VRRLELPEDAD  + EA + ND+ LEI+IP
Sbjct: 121 VEISGQWKEQR--DPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 177

Query: 181 K 182
           K
Sbjct: 181 K 177

The following BLAST results are available for this feature:

BLAST of CsGy3G005480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152915.1	8.3e-109	100.00	PREDICTED: 21.7 kDa class VI heat shock protein isoform X1 [Cucumis sativus] >KG...	[more]
XP_008463443.1	4.7e-104	96.00	PREDICTED: 21.7 kDa class VI heat shock protein [Cucumis melo]	[more]
ADU55792.1	1.2e-94	89.55	HSP23.0 [Citrullus lanatus]	[more]
XP_022154944.1	4.1e-84	81.31	21.7 kDa class VI heat shock protein [Momordica charantia]	[more]
XP_022985262.1	1.5e-81	79.50	21.7 kDa class VI heat shock protein [Cucurbita maxima]	[more]

BLAST of CsGy3G005480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54660.1	3.0e-52	52.72	HSP20-like chaperones superfamily protein	[more]

BLAST of CsGy3G005480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FIT9\|HS217_ARATH	5.4e-51	52.72	21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP21.7 ...	[more]
sp\|Q6AUW3\|HS223_ORYSJ	1.4e-35	44.77	22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
sp\|P30693\|HSP11_HELAN	9.6e-08	34.55	17.6 kDa class I heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.6 PE=2...	[more]

BLAST of CsGy3G005480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6D5\|A0A0A0L6D5_CUCSA	5.5e-109	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081340 PE=3 SV=1	[more]
tr\|A0A1S3CJA6\|A0A1S3CJA6_CUCME	3.1e-104	96.00	21.7 kDa class VI heat shock protein OS=Cucumis melo OX=3656 GN=LOC103501614 PE=...	[more]
tr\|H6TB45\|H6TB45_CITLA	7.7e-95	89.55	HSP23.0 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
tr\|A0A2P4LLZ6\|A0A2P4LLZ6_QUESU	3.3e-61	62.31	21.7 kDa class vi heat shock protein OS=Quercus suber OX=58331 GN=CFP56_51576 PE...	[more]
tr\|V4UMA5\|V4UMA5_9ROSI	3.0e-59	64.09	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009527mg PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G005480.1	CsGy3G005480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 54..191 e-value: 1.7E-17 score: 65.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 52..186
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 88..187 e-value: 2.2E-9 score: 37.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 78..196 score: 12.457
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 10..194
None	No IPR available	PANTHER	PTHR11527:SF5	21.7 KDA CLASS VI HEAT SHOCK PROTEIN	coord: 10..194

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G005480	Cla005275	Watermelon (97103) v1	cgybwmB183
CsGy3G005480	Csa3G081340	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G005480	MELO3C025424	Melon (DHL92) v3.5.1	cgybmeB201
CsGy3G005480	ClCG10G005700	Watermelon (Charleston Gray)	cgybwcgB174
CsGy3G005480	CSPI03G05380	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G005480	CmaCh16G008470	Cucurbita maxima (Rimu)	cgybcmaB341
CsGy3G005480	CmoCh16G009150	Cucurbita moschata (Rifu)	cgybcmoB303
CsGy3G005480	Lsi05G006280	Bottle gourd (USVL1VR-Ls)	cgyblsiB183
CsGy3G005480	Cp4.1LG00g00140	Cucurbita pepo (Zucchini)	cgybcpeB280
CsGy3G005480	MELO3C025424.2	Melon (DHL92) v3.6.1	cgybmedB205
CsGy3G005480	CsaV3_3G005420	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G005480	Cla97C10G189920	Watermelon (97103) v2	cgybwmbB174
CsGy3G005480	Bhi11G000520	Wax gourd	cgybwgoB209
CsGy3G005480	Carg24823	Silver-seed gourd	carcgybB0784

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G005480	Cucurbita maxima (Rimu)	cgybcmaB416
CsGy3G005480	Cucurbita moschata (Rifu)	cgybcmoB393
CsGy3G005480	Cucurbita pepo (Zucchini)	cgybcpeB369
CsGy3G005480	Silver-seed gourd	carcgybB0659
CsGy3G005480	Silver-seed gourd	carcgybB0662