CmoCh20G011890 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTAAAATTTGATATTGTAACTTAAATTTTAAAAATTTAGGGAAAAAAAGAAAAATAATAAAGCAGCCCGAAGGGTTGAGCGGAGTGGTCGTGATCAGTATAACCATCAACATCACCGTCTCTGCGAGACACGGTATGTTACAGACGCAGTCACTTTCTCTCTCTAACTCCACAGCTCTCTTCCACTCTCTCTGTTTTCATACTCTTAAACCACAAAGAAAACCAACCAATTCTGAGGAGACAGAGAGTGAGATATGGTGAGGAAATGCAGAGGAGTAGCAGAGATTGCAGTAATGGAGGTCGACTTAAGGACTACCAGACCTCCACCTGACTTGGATGATGTACCACCTTCCGCCAACAAGAGGAAGATCGCAGCCGAAACAAACTTTGAGTTCTCGACAACGACAACCTCGTTTGTCAAGCTCCGGAGCCGGCGACGCCGCGTTGTTTTGCCGGAGAATTCGGTCCCTGCACCGCCGGCGGAGAATACGCTTCTGCTACCGGGTACAACGTCGACGAAGGAGAGAAGCTCTATTAGCCCGACCTCCGATGATGATGCGTCCACTTTTGCCTGCTCAAGTAACGGCTGCAGCGAGATTGTTGAAGAGAGCAAGTTCGTAGATCTGGAGGTGACAATATTTTGTCTGTTTTTGTGACTTCTGAAGTCTCTAATGTTTTTTATTTGGTTTGTTTCTGAATGTTGTGTGTTCATATTATTTTTCTGCAGGATGAGAAAGATGAACACGGATTCGCGTACAAATCCAGCCGAGAAAGGTTATTAATCTGGCACGAGCTTCTTAATTTCCTACTGATCTCGATCTGAAATTGTTGAATCTTCCTTGTACGCGAAAATTTTTAATTCAAAATTCGAAGAAAAAAGTGCTTCAGAAACGGACTTCACCTCCATTAAACTAATTAATTAATTGTTTCCGTTTGTGATTTTAATTCCTCTCTCTCTCTCTCGCTCTCACGACTCATAAATCTCCACACTTGTTCTTTCTTTTCATCATCTTGCAGGAGGGAGACGACTCCGTCTAGCCAATTCCGTCCAACACAGTCCGGCGATATGGAGTCTCCGGCAGGGAAAAGCGAGGCAACTTCTTCCGGTAATAGATCTTTGTCTTCGGTGAAGATGCCAGCAGAATCGGAGCTGGAAGCATTCTTCATCGCCGCTGAGAAAAACATACAGAAACGTTTCACTGAGAAGTAAGTTTAATGGAGCTACAGTTTCTTCGAATTTTCCTGTAGCTATGAAAGAAATTAACAGAGTTGGAAAAATCTGAACACAACTGCAGGTATAATTACGATATTATTGAGGATGTTCCCTTGGAAGGACGTTACGAATGGGTTCGATTAAATATTTGATGTACCTTCTTTGTAAACTTCCCTCTCCTTCTCTTCTTTTTCCTGCTAATTCTGTACAGTTAGCGTTCTGATCTCTATCATCTTGTAAAAGTAGAAAACTAAGTTAATTTATTCTTGGTACGGTTCTTCATAGAAAAAGAAATTGTAAATTCCTTAGAATTAGGAAGAACTGAACAAAGAAAATTCTTATTCGCGAAGATGATGAGCGAGCATCTAAAGTTCGCCAGTTTGCAATTCAGGGTTTCAGTTTTTCATTCTGGTACGATTCCCAGCCTGAAAATTCGTCCTCATCTTTT AGTAAAATTTGATATTGTAACTTAAATTTTAAAAATTTAGGGAAAAAAAGAAAAATAATAAAGCAGCCCGAAGGGTTGAGCGGAGTGGTCGTGATCAGTATAACCATCAACATCACCGTCTCTGCGAGACACGGTATGTTACAGACGCAGTCACTTTCTCTCTCTAACTCCACAGCTCTCTTCCACTCTCTCTGTTTTCATACTCTTAAACCACAAAGAAAACCAACCAATTCTGAGGAGACAGAGAGTGAGATATGGTGAGGAAATGCAGAGGAGTAGCAGAGATTGCAGTAATGGAGGTCGACTTAAGGACTACCAGACCTCCACCTGACTTGGATGATGTACCACCTTCCGCCAACAAGAGGAAGATCGCAGCCGAAACAAACTTTGAGTTCTCGACAACGACAACCTCGTTTGTCAAGCTCCGGAGCCGGCGACGCCGCGTTGTTTTGCCGGAGAATTCGGTCCCTGCACCGCCGGCGGAGAATACGCTTCTGCTACCGGGTACAACGTCGACGAAGGAGAGAAGCTCTATTAGCCCGACCTCCGATGATGATGCGTCCACTTTTGCCTGCTCAAGTAACGGCTGCAGCGAGATTGTTGAAGAGAGCAAGTTCGTAGATCTGGAGGATGAGAAAGATGAACACGGATTCGCGTACAAATCCAGCCGAGAAAGGAGGGAGACGACTCCGTCTAGCCAATTCCGTCCAACACAGTCCGGCGATATGGAGTCTCCGGCAGGGAAAAGCGAGGCAACTTCTTCCGGTAATAGATCTTTGTCTTCGGTGAAGATGCCAGCAGAATCGGAGCTGGAAGCATTCTTCATCGCCGCTGAGAAAAACATACAGAAACGTTTCACTGAGAAGTATAATTACGATATTATTGAGGATGTTCCCTTGGAAGGACGTTACGAATGGGTTCGATTAAATATTTGATGTACCTTCTTTGTAAACTTCCCTCTCCTTCTCTTCTTTTTCCTGCTAATTCTGTACAGTTAGCGTTCTGATCTCTATCATCTTGTAAAAGTAGAAAACTAAGTTAATTTATTCTTGGTACGGTTCTTCATAGAAAAAGAAATTGTAAATTCCTTAGAATTAGGAAGAACTGAACAAAGAAAATTCTTATTCGCGAAGATGATGAGCGAGCATCTAAAGTTCGCCAGTTTGCAATTCAGGGTTTCAGTTTTTCATTCTGGTACGATTCCCAGCCTGAAAATTCGTCCTCATCTTTT ATGGTGAGGAAATGCAGAGGAGTAGCAGAGATTGCAGTAATGGAGGTCGACTTAAGGACTACCAGACCTCCACCTGACTTGGATGATGTACCACCTTCCGCCAACAAGAGGAAGATCGCAGCCGAAACAAACTTTGAGTTCTCGACAACGACAACCTCGTTTGTCAAGCTCCGGAGCCGGCGACGCCGCGTTGTTTTGCCGGAGAATTCGGTCCCTGCACCGCCGGCGGAGAATACGCTTCTGCTACCGGGTACAACGTCGACGAAGGAGAGAAGCTCTATTAGCCCGACCTCCGATGATGATGCGTCCACTTTTGCCTGCTCAAGTAACGGCTGCAGCGAGATTGTTGAAGAGAGCAAGTTCGTAGATCTGGAGGATGAGAAAGATGAACACGGATTCGCGTACAAATCCAGCCGAGAAAGGAGGGAGACGACTCCGTCTAGCCAATTCCGTCCAACACAGTCCGGCGATATGGAGTCTCCGGCAGGGAAAAGCGAGGCAACTTCTTCCGGTAATAGATCTTTGTCTTCGGTGAAGATGCCAGCAGAATCGGAGCTGGAAGCATTCTTCATCGCCGCTGAGAAAAACATACAGAAACGTTTCACTGAGAAGTATAATTACGATATTATTGAGGATGTTCCCTTGGAAGGACGTTACGAATGGGTTCGATTAAATATTTGA
BLAST of CmoCh20G011890 vs. Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 2.7e-11 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 1
BLAST of CmoCh20G011890 vs. Swiss-Prot
Match: KRP6_ORYSJ (Cyclin-dependent kinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=KRP6 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 8.7e-10 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of CmoCh20G011890 vs. Swiss-Prot
Match: KRP3_ARATH (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.7e-09 Identity = 67/229 (29.26%), Postives = 106/229 (46.29%), Query Frame = 1
BLAST of CmoCh20G011890 vs. Swiss-Prot
Match: KRP1_ORYSJ (Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=KRP1 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08 Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 1
BLAST of CmoCh20G011890 vs. Swiss-Prot
Match: KRP1_ORYSI (Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. indica GN=KRP1 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08 Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TrEMBL
Match: W9QWF0_9ROSA (Cyclin-dependent kinase inhibitor 7 OS=Morus notabilis GN=L484_008262 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 5.5e-35 Identity = 119/251 (47.41%), Postives = 149/251 (59.36%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TrEMBL
Match: A0A067KI15_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12376 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 6.2e-31 Identity = 99/195 (50.77%), Postives = 123/195 (63.08%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TrEMBL
Match: D7SVZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00800 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 8.2e-31 Identity = 100/200 (50.00%), Postives = 130/200 (65.00%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TrEMBL
Match: A0A0B0NPG0_GOSAR (Cyclin-dependent kinase inhibitor 7-like protein OS=Gossypium arboreum GN=F383_16914 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24 Identity = 92/234 (39.32%), Postives = 125/234 (53.42%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TrEMBL
Match: A0A0D2SNW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G211800 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23 Identity = 94/234 (40.17%), Postives = 122/234 (52.14%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TAIR10
Match: AT1G49620.1 (AT1G49620.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TAIR10
Match: AT3G24810.1 (AT3G24810.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TAIR10
Match: AT2G23430.1 (AT2G23430.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 59.3 bits (142), Expect = 3.5e-09 Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TAIR10
Match: AT3G19150.1 (AT3G19150.1 KIP-related protein 6) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08 Identity = 65/212 (30.66%), Postives = 106/212 (50.00%), Query Frame = 1
BLAST of CmoCh20G011890 vs. TAIR10
Match: AT5G48820.2 (AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase) HSP 1 Score: 51.6 bits (122), Expect = 7.3e-07 Identity = 67/247 (27.13%), Postives = 106/247 (42.91%), Query Frame = 1
BLAST of CmoCh20G011890 vs. NCBI nr
Match: gi|359480685|ref|XP_002282199.2| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X2 [Vitis vinifera]) HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35 Identity = 111/233 (47.64%), Postives = 148/233 (63.52%), Query Frame = 1
BLAST of CmoCh20G011890 vs. NCBI nr
Match: gi|703091494|ref|XP_010094374.1| (Cyclin-dependent kinase inhibitor 7 [Morus notabilis]) HSP 1 Score: 156.0 bits (393), Expect = 7.8e-35 Identity = 119/251 (47.41%), Postives = 149/251 (59.36%), Query Frame = 1
BLAST of CmoCh20G011890 vs. NCBI nr
Match: gi|731397270|ref|XP_010652818.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Vitis vinifera]) HSP 1 Score: 153.3 bits (386), Expect = 5.1e-34 Identity = 111/234 (47.44%), Postives = 148/234 (63.25%), Query Frame = 1
BLAST of CmoCh20G011890 vs. NCBI nr
Match: gi|1009145061|ref|XP_015890129.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 148.3 bits (373), Expect = 1.6e-32 Identity = 110/234 (47.01%), Postives = 137/234 (58.55%), Query Frame = 1
BLAST of CmoCh20G011890 vs. NCBI nr
Match: gi|643722036|gb|KDP31915.1| (hypothetical protein JCGZ_12376 [Jatropha curcas]) HSP 1 Score: 142.5 bits (358), Expect = 9.0e-31 Identity = 99/195 (50.77%), Postives = 123/195 (63.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |