CmoCh02G005670 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTCGTCATCAGTCTCACCATCAGCATCACCGTCTGAGAGACAGTCACTCACACACGCAGTCTCTTTCTCTCTCTCTCTCTCTCTCCATCTCCATCTCCGGCTCTCTTCCACTCTCTCTGTTTTTCGTACTCTTGAGCCACCAAAATCACACCAACCAATTCTAAGACGCATCACAAATTCAGATGGTGAGGAAATGTAGAGCAGTTGCAGAGATTGCAGTCATGGAGGTGGACGTCAGGAGGACTACCAGACCTCCACCTGATTTGGAGGATGTACCGCATTCCTCCACCAACACTTCCGCTAACAAGAGGCAGATCACCGCTGGAACTGACTTTCACTTCACCACCGCTACGACGTCGTTTGTCAAGCTCCCGAGACGGAGACGCCGCCTTGTTTTGCCGCTGGAGAGTTCTCTCCGGCAGCCGAGCACGACGTCCACGGAGGAGAGGAGCTCTACTAGTCCTATCTCCGATGACGATGCGTCCGCTTTTTGCTGCTCAAGTAACGGTTGCAGTGAGGTTGTTGAGGAGAGTAGCAAGTTTGTAGATCTGGAGGTGACACTTTTGAACTCTAAATAGATTTGGAGTTGTTTGTTTTGTTTGTTTTTGTGAATTCTGAAGTTTTCTATATTTTTTTTTATTTCATTTTGTGTTTTTGAAAATTTTGTTGTTCATAATACTTTTTGCAGGATGAGGAAAAAGATGAACATGGAATCGCGTACAAATCTTGCAGAGAAAGGTTTTTAATATCGCACGAACTTCTTAATTTCCTACTGATAATCTCGATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATTCAAAATCGAAGGAAGAGTGTTTAGAAACGTACTTGACCTCCATTAAACTAATTAATGAATTGTTTCCGTTTGTGAATTTAATTCCTCTCTCCTCCTCTCCCTCTCCCTCTCTCTTTCGTTCATAAATACACAGTTCGCGATTACAGTCGCAGAAATCTTCTTCACACTCCATTCTTCTTTTTCGTCTTCTTGCAGGAGAGAAACGACTCCGTCTAGCCATTTCCAATCAACGATGTCCAGCGATATGGAGTCTCTGGCAATGAAAACCAAGGCAACTTCCGGCAATGGATCTTCGTCGTCGTCAATGAAGAAGCCAGCGGAATCGGAGCTCGAAGAATTCTTCACCGCCGCCGAGAAAAAAATCCAGAAACGTTTCGCAGAGAAGTAAGTTAAACGGAGCCGCCCTAGGTTCTTCAATTTTTGTTCTATCTACGAAGAAATTAACAGAGTTTGAAAAGGAATTATGATCACAATTGCAGGTATAATTACGACATTGTTGAGGACGTTCCGTTGGAAGGACGTTACGAATGGATTCGATTAAAGCCATAAAAGAGAAAACAAACTGAAGAACACCATTCCGTGAACACTCATATTTTAGCTTAATCCTCCATAATTAGTACGTACTAATCATCATTCAATTCTACCTTTCTTTGTAGACTTCCTTCTCCTCCTTGTCTCTGCTTGCTTCAAATTTTGTACAGTTAGCGTTTGCACAATCATCGTGTAAAAGTAGAAACCCAAGTTAATTTGTTGTTCGTACGATTGTTCAGAGGGAAGAAAAAAAAAAAAACTGTAAATTCGTTAGAGAATCAGGAAGAACAGCACAAAAAAAGATTCTTAGTACGATTCCCAGTCTGAAAATTCGTCCTGATTTCATTTATTTCTAATTTAAATTTGACACATTAGAAACTCCCCTTTCATTCGTCCTTCTGCTTACATAATTTTGTTTCTTATGCTCTTTCTTCTTCTCTTCATTTCATGTTCTTTTGTATTCTATCTTGGCCATGCACATACTGTTTAAGAAACAAAAACAAAAATCTG GGTCGTCATCAGTCTCACCATCAGCATCACCGTCTGAGAGACAGTCACTCACACACGCAGTCTCTTTCTCTCTCTCTCTCTCTCTCCATCTCCATCTCCGGCTCTCTTCCACTCTCTCTGTTTTTCGTACTCTTGAGCCACCAAAATCACACCAACCAATTCTAAGACGCATCACAAATTCAGATGGTGAGGAAATGTAGAGCAGTTGCAGAGATTGCAGTCATGGAGGTGGACGTCAGGAGGACTACCAGACCTCCACCTGATTTGGAGGATGTACCGCATTCCTCCACCAACACTTCCGCTAACAAGAGGCAGATCACCGCTGGAACTGACTTTCACTTCACCACCGCTACGACGTCGTTTGTCAAGCTCCCGAGACGGAGACGCCGCCTTGTTTTGCCGCTGGAGAGTTCTCTCCGGCAGCCGAGCACGACGTCCACGGAGGAGAGGAGCTCTACTAGTCCTATCTCCGATGACGATGCGTCCGCTTTTTGCTGCTCAAGTAACGGTTGCAGTGAGGTTGTTGAGGAGAGTAGCAAGTTTGTAGATCTGGAGGATGAGGAAAAAGATGAACATGGAATCGCGTACAAATCTTGCAGAGAAAGGAGAGAAACGACTCCGTCTAGCCATTTCCAATCAACGATGTCCAGCGATATGGAGTCTCTGGCAATGAAAACCAAGGCAACTTCCGGCAATGGATCTTCGTCGTCGTCAATGAAGAAGCCAGCGGAATCGGAGCTCGAAGAATTCTTCACCGCCGCCGAGAAAAAAATCCAGAAACGTTTCGCAGAGAAGTATAATTACGACATTGTTGAGGACGTTCCGTTGGAAGGACGTTACGAATGGATTCGATTAAAGCCATAAAAGAGAAAACAAACTGAAGAACACCATTCCGTGAACACTCATATTTTAGCTTAATCCTCCATAATTAGTACGTACTAATCATCATTCAATTCTACCTTTCTTTGTAGACTTCCTTCTCCTCCTTGTCTCTGCTTGCTTCAAATTTTGTACAGTTAGCGTTTGCACAATCATCGTGTAAAAGTAGAAACCCAAGTTAATTTGTTGTTCGTACGATTGTTCAGAGGGAAGAAAAAAAAAAAAACTGTAAATTCGTTAGAGAATCAGGAAGAACAGCACAAAAAAAGATTCTTAGTACGATTCCCAGTCTGAAAATTCGTCCTGATTTCATTTATTTCTAATTTAAATTTGACACATTAGAAACTCCCCTTTCATTCGTCCTTCTGCTTACATAATTTTGTTTCTTATGCTCTTTCTTCTTCTCTTCATTTCATGTTCTTTTGTATTCTATCTTGGCCATGCACATACTGTTTAAGAAACAAAAACAAAAATCTG ATGGTGAGGAAATGTAGAGCAGTTGCAGAGATTGCAGTCATGGAGGTGGACGTCAGGAGGACTACCAGACCTCCACCTGATTTGGAGGATGTACCGCATTCCTCCACCAACACTTCCGCTAACAAGAGGCAGATCACCGCTGGAACTGACTTTCACTTCACCACCGCTACGACGTCGTTTGTCAAGCTCCCGAGACGGAGACGCCGCCTTGTTTTGCCGCTGGAGAGTTCTCTCCGGCAGCCGAGCACGACGTCCACGGAGGAGAGGAGCTCTACTAGTCCTATCTCCGATGACGATGCGTCCGCTTTTTGCTGCTCAAGTAACGGTTGCAGTGAGGTTGTTGAGGAGAGTAGCAAGTTTGTAGATCTGGAGGATGAGGAAAAAGATGAACATGGAATCGCGTACAAATCTTGCAGAGAAAGGAGAGAAACGACTCCGTCTAGCCATTTCCAATCAACGATGTCCAGCGATATGGAGTCTCTGGCAATGAAAACCAAGGCAACTTCCGGCAATGGATCTTCGTCGTCGTCAATGAAGAAGCCAGCGGAATCGGAGCTCGAAGAATTCTTCACCGCCGCCGAGAAAAAAATCCAGAAACGTTTCGCAGAGAAGTATAATTACGACATTGTTGAGGACGTTCCGTTGGAAGGACGTTACGAATGGATTCGATTAAAGCCATAA
BLAST of CmoCh02G005670 vs. Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12 Identity = 60/167 (35.93%), Postives = 84/167 (50.30%), Query Frame = 1
BLAST of CmoCh02G005670 vs. Swiss-Prot
Match: KRP6_ORYSJ (Cyclin-dependent kinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=KRP6 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10 Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 1
BLAST of CmoCh02G005670 vs. Swiss-Prot
Match: KRP3_ARATH (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09 Identity = 76/240 (31.67%), Postives = 115/240 (47.92%), Query Frame = 1
BLAST of CmoCh02G005670 vs. Swiss-Prot
Match: KRP3_ORYSJ (Cyclin-dependent kinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=KRP3 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 6.2e-08 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 1
BLAST of CmoCh02G005670 vs. Swiss-Prot
Match: KRP1_ARATH (Cyclin-dependent kinase inhibitor 1 OS=Arabidopsis thaliana GN=KRP1 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 8.2e-08 Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TrEMBL
Match: W9QWF0_9ROSA (Cyclin-dependent kinase inhibitor 7 OS=Morus notabilis GN=L484_008262 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 9.6e-32 Identity = 119/258 (46.12%), Postives = 151/258 (58.53%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TrEMBL
Match: D7SVZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00800 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-31 Identity = 95/198 (47.98%), Postives = 127/198 (64.14%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TrEMBL
Match: A0A067KI15_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12376 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.5e-27 Identity = 88/175 (50.29%), Postives = 112/175 (64.00%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TrEMBL
Match: B9SC41_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407240 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23 Identity = 76/156 (48.72%), Postives = 96/156 (61.54%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TrEMBL
Match: A0A0B0NPG0_GOSAR (Cyclin-dependent kinase inhibitor 7-like protein OS=Gossypium arboreum GN=F383_16914 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22 Identity = 97/234 (41.45%), Postives = 135/234 (57.69%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TAIR10
Match: AT1G49620.1 (AT1G49620.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 75.1 bits (183), Expect = 6.2e-14 Identity = 60/167 (35.93%), Postives = 84/167 (50.30%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TAIR10
Match: AT2G23430.1 (AT2G23430.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09 Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TAIR10
Match: AT3G24810.1 (AT3G24810.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09 Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TAIR10
Match: AT3G19150.1 (AT3G19150.1 KIP-related protein 6) HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08 Identity = 52/157 (33.12%), Postives = 81/157 (51.59%), Query Frame = 1
BLAST of CmoCh02G005670 vs. TAIR10
Match: AT5G48820.2 (AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase) HSP 1 Score: 55.1 bits (131), Expect = 6.6e-08 Identity = 76/254 (29.92%), Postives = 112/254 (44.09%), Query Frame = 1
BLAST of CmoCh02G005670 vs. NCBI nr
Match: gi|359480685|ref|XP_002282199.2| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X2 [Vitis vinifera]) HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35 Identity = 106/230 (46.09%), Postives = 142/230 (61.74%), Query Frame = 1
BLAST of CmoCh02G005670 vs. NCBI nr
Match: gi|731397270|ref|XP_010652818.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Vitis vinifera]) HSP 1 Score: 154.1 bits (388), Expect = 3.0e-34 Identity = 106/231 (45.89%), Postives = 142/231 (61.47%), Query Frame = 1
BLAST of CmoCh02G005670 vs. NCBI nr
Match: gi|1009145061|ref|XP_015890129.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 149.8 bits (377), Expect = 5.6e-33 Identity = 113/239 (47.28%), Postives = 144/239 (60.25%), Query Frame = 1
BLAST of CmoCh02G005670 vs. NCBI nr
Match: gi|703091494|ref|XP_010094374.1| (Cyclin-dependent kinase inhibitor 7 [Morus notabilis]) HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31 Identity = 119/258 (46.12%), Postives = 151/258 (58.53%), Query Frame = 1
BLAST of CmoCh02G005670 vs. NCBI nr
Match: gi|296082434|emb|CBI21439.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 143.7 bits (361), Expect = 4.0e-31 Identity = 95/198 (47.98%), Postives = 127/198 (64.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |