Lsi10G005650 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCGTTTCAAAACAATGTTGAGGTTGAGGAACTAAAATTAAAAAATTAGAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAGCAATCCGTAGGATTGAACGGAGTGGTGGTCATGAGTATCACCATCAGCATCAACCGTCTCTGAAAGGCACAGTGAGTCTCTTTCTCTCTCTGTCTCTACAGCTCTCTTCCACTCTCTCTGTATTCGTACTCTGAAACCCACAAAGAAAACCAACCAATTCTGAGGAGAGAGATCAGAGATTGAGATATGGTGAGGAAATGTAGAGGAGTTGCAGAGATTGCAGTCATGGAGGTCGACCTAAGAACTACCAGACCTCCACCTGACAACAAGAGAAAGATCACCGCCGGAACAGACTTTGAAATCTCGACCACGACGACTTCATTTCTCAAGCTCCGGAGCCGCCGACGCCGTGTTCTTTTGCCAGAAAATTCGGTTCCGCCAGCGGAGAGAACCTCTGTTAGCCCTACCTCCGATGACGATGCGTCTGCCTTTTGCTGCTCCAGTAACGCCTGCAGTGAGATTGTTGAGGAGAGCATCAAGTTCGTAGATCTGGAGGTCACAATTTTTTAAATCTAAATTGATTCCGAGTTGTTTGTTTGTTTGTTTTTGTGACTTGTGAATTCTGTTTGTGATTTCGTTTGTTTCTGAAAATTTTGTGTTCATATTACTTTTTGCAGGACGAGAATGATGAACATGGAGTCGCGTTCAAATCCAGCCGAGAAAGGTTTTAATTAATTTCCTACTGATCTCGATCTGAAATTGTTGAGTCTTCCTTGTTCTTGATTTTTTTTTTTTTTTTTTTTTTTTGAATTCAAAATTTGAAGAAAGAGTGTTTCAGAAACGGACTTGACCTCCATTAAACTAATTAATTAATGAATTGTTTCCGTTTGTGCTTTTAATTCCTCTCTCTTTCGTCCATAAATACACAGTTTGCGATTACAGTCTCAAATCTTCACACTCTGATCCGTTCTTCCTTTTCATCTTCTTGCAGCAGAGAGACGACTCCGTCTAGCGAATTCCGATTACCGCCGTCCGGCGATATGGAGTCTCCCGCAAGGAAAAGCGAAGCAACTTCCGGCAATAGATCTTCGTCTTCGGTGAAGATGCCGGCGGAATCGGAGCTGGAAGAATTCTTCATCGCCGCCGAGAAAAACATACAGAAACGTTTCGCTGAGAAGTAAGTTTAATGGAGGATGCATAGCTAATAGCTTCTTCAAATTTTCTTGTAGCCATGGAAGAAATTAACAGAGTTGGAAAATTTTGGACACAAATTGCAGGTATAATTACGATATTGTTGAGGATGTTCCGTTGGAAGGACGTTACGAATGGGTTCGAGTAAAGCCATAAGAACAAAATCAAGAAATTAAATAATATTAATTAGGCTTAAACCTCCATTAGTATTCAATCGATCTACCTTCTTTGTAAACTTCCCTCTCTTTAATTCCACTTTTTCCTTCTAATTTTGTACAGTTAGCGTTCTGATCTCTATCATCATCTTGTAAAAGTAGAAAAGCCAAAAGCTCTTCGTACGATTCTTCACAGAAAAAGATATTGTAATTAAATTAGGAAGAAATTGAACAAATAAGATTCTTATTCGTGAAGATGAACGATCGAGCATCTAAAATTCCTCAGTTCTTCATTCTGGTACGATTCCCTGAAAATTCCTCCTC AAATCGTTTCAAAACAATGTTGAGGTTGAGGAACTAAAATTAAAAAATTAGAAAGAAAAAAAAAAAAAAAGAAGCAATCCGTAGGATTGAACGGAGTGGTGGTCATGAGTATCACCATCAGCATCAACCGTCTCTGAAAGGCACAGTGAGTCTCTTTCTCTCTCTGTCTCTACAGCTCTCTTCCACTCTCTCTGTATTCGTACTCTGAAACCCACAAAGAAAACCAACCAATTCTGAGGAGAGAGATCAGAGATTGAGATATGGTGAGGAAATGTAGAGGAGTTGCAGAGATTGCAGTCATGGAGGTCGACCTAAGAACTACCAGACCTCCACCTGACAACAAGAGAAAGATCACCGCCGGAACAGACTTTGAAATCTCGACCACGACGACTTCATTTCTCAAGCTCCGGAGCCGCCGACGCCGTGTTCTTTTGCCAGAAAATTCGGTTCCGCCAGCGGAGAGAACCTCTGTTAGCCCTACCTCCGATGACGATGCGTCTGCCTTTTGCTGCTCCAGTAACGCCTGCAGTGAGATTGTTGAGGAGAGCATCAAGTTCGTAGATCTGGAGGACGAGAATGATGAACATGGAGTCGCGTTCAAATCCAGCCGAGAAAGCAGAGAGACGACTCCGTCTAGCGAATTCCGATTACCGCCGTCCGGCGATATGGAGTCTCCCGCAAGGAAAAGCGAAGCAACTTCCGGCAATAGATCTTCGTCTTCGGTGAAGATGCCGGCGGAATCGGAGCTGGAAGAATTCTTCATCGCCGCCGAGAAAAACATACAGAAACGTTTCGCTGAGAAGTATAATTACGATATTGTTGAGGATGTTCCGTTGGAAGGACGTTACGAATGGGTTCGAGTAAAGCCATAAGAACAAAATCAAGAAATTAAATAATATTAATTAGGCTTAAACCTCCATTAGTATTCAATCGATCTACCTTCTTTGTAAACTTCCCTCTCTTTAATTCCACTTTTTCCTTCTAATTTTGTACAGTTAGCGTTCTGATCTCTATCATCATCTTGTAAAAGTAGAAAAGCCAAAAGCTCTTCGTACGATTCTTCACAGAAAAAGATATTGTAATTAAATTAGGAAGAAATTGAACAAATAAGATTCTTATTCGTGAAGATGAACGATCGAGCATCTAAAATTCCTCAGTTCTTCATTCTGGTACGATTCCCTGAAAATTCCTCCTC ATGGTGAGGAAATGTAGAGGAGTTGCAGAGATTGCAGTCATGGAGGTCGACCTAAGAACTACCAGACCTCCACCTGACAACAAGAGAAAGATCACCGCCGGAACAGACTTTGAAATCTCGACCACGACGACTTCATTTCTCAAGCTCCGGAGCCGCCGACGCCGTGTTCTTTTGCCAGAAAATTCGGTTCCGCCAGCGGAGAGAACCTCTGTTAGCCCTACCTCCGATGACGATGCGTCTGCCTTTTGCTGCTCCAGTAACGCCTGCAGTGAGATTGTTGAGGAGAGCATCAAGTTCGTAGATCTGGAGGACGAGAATGATGAACATGGAGTCGCGTTCAAATCCAGCCGAGAAAGCAGAGAGACGACTCCGTCTAGCGAATTCCGATTACCGCCGTCCGGCGATATGGAGTCTCCCGCAAGGAAAAGCGAAGCAACTTCCGGCAATAGATCTTCGTCTTCGGTGAAGATGCCGGCGGAATCGGAGCTGGAAGAATTCTTCATCGCCGCCGAGAAAAACATACAGAAACGTTTCGCTGAGAAGTATAATTACGATATTGTTGAGGATGTTCCGTTGGAAGGACGTTACGAATGGGTTCGAGTAAAGCCATAA MVRKCRGVAEIAVMEVDLRTTRPPPDNKRKITAGTDFEISTTTTSFLKLRSRRRRVLLPENSVPPAERTSVSPTSDDDASAFCCSSNACSEIVEESIKFVDLEDENDEHGVAFKSSRESRETTPSSEFRLPPSGDMESPARKSEATSGNRSSSSVKMPAESELEEFFIAAEKNIQKRFAEKYNYDIVEDVPLEGRYEWVRVKP
BLAST of Lsi10G005650 vs. Swiss-Prot
Match: KRP3_ARATH (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.2e-14 Identity = 71/222 (31.98%), Postives = 109/222 (49.10%), Query Frame = 1
BLAST of Lsi10G005650 vs. Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 8.4e-12 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 1
BLAST of Lsi10G005650 vs. Swiss-Prot
Match: KRP6_ORYSJ (Cyclin-dependent kinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=KRP6 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.2e-11 Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1
BLAST of Lsi10G005650 vs. Swiss-Prot
Match: KRP4_ORYSJ (Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica GN=KRP4 PE=2 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 4.6e-10 Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = 1
BLAST of Lsi10G005650 vs. Swiss-Prot
Match: KRP1_ARATH (Cyclin-dependent kinase inhibitor 1 OS=Arabidopsis thaliana GN=KRP1 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 1
BLAST of Lsi10G005650 vs. TrEMBL
Match: D7SVZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00800 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.9e-35 Identity = 100/188 (53.19%), Postives = 128/188 (68.09%), Query Frame = 1
BLAST of Lsi10G005650 vs. TrEMBL
Match: W9QWF0_9ROSA (Cyclin-dependent kinase inhibitor 7 OS=Morus notabilis GN=L484_008262 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.9e-35 Identity = 115/252 (45.63%), Postives = 145/252 (57.54%), Query Frame = 1
BLAST of Lsi10G005650 vs. TrEMBL
Match: A0A0B0NPG0_GOSAR (Cyclin-dependent kinase inhibitor 7-like protein OS=Gossypium arboreum GN=F383_16914 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-30 Identity = 100/218 (45.87%), Postives = 136/218 (62.39%), Query Frame = 1
BLAST of Lsi10G005650 vs. TrEMBL
Match: A0A0D2SNW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G211800 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.4e-29 Identity = 101/218 (46.33%), Postives = 131/218 (60.09%), Query Frame = 1
BLAST of Lsi10G005650 vs. TrEMBL
Match: A0A0D2SHH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G211800 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.3e-29 Identity = 102/221 (46.15%), Postives = 132/221 (59.73%), Query Frame = 1
BLAST of Lsi10G005650 vs. TAIR10
Match: AT1G49620.1 (AT1G49620.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 72.0 bits (175), Expect = 4.7e-13 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 1
BLAST of Lsi10G005650 vs. TAIR10
Match: AT5G48820.2 (AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase) HSP 1 Score: 68.2 bits (165), Expect = 6.8e-12 Identity = 71/240 (29.58%), Postives = 109/240 (45.42%), Query Frame = 1
BLAST of Lsi10G005650 vs. TAIR10
Match: AT2G23430.1 (AT2G23430.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 65.1 bits (157), Expect = 5.8e-11 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 1
BLAST of Lsi10G005650 vs. TAIR10
Match: AT3G24810.1 (AT3G24810.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 1
BLAST of Lsi10G005650 vs. TAIR10
Match: AT3G19150.1 (AT3G19150.1 KIP-related protein 6) HSP 1 Score: 61.6 bits (148), Expect = 6.4e-10 Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 1
BLAST of Lsi10G005650 vs. NCBI nr
Match: gi|359480685|ref|XP_002282199.2| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X2 [Vitis vinifera]) HSP 1 Score: 169.1 bits (427), Expect = 8.0e-39 Identity = 109/228 (47.81%), Postives = 141/228 (61.84%), Query Frame = 1
BLAST of Lsi10G005650 vs. NCBI nr
Match: gi|731397270|ref|XP_010652818.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Vitis vinifera]) HSP 1 Score: 165.6 bits (418), Expect = 8.9e-38 Identity = 110/229 (48.03%), Postives = 142/229 (62.01%), Query Frame = 1
BLAST of Lsi10G005650 vs. NCBI nr
Match: gi|703091494|ref|XP_010094374.1| (Cyclin-dependent kinase inhibitor 7 [Morus notabilis]) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 115/252 (45.63%), Postives = 145/252 (57.54%), Query Frame = 1
BLAST of Lsi10G005650 vs. NCBI nr
Match: gi|296082434|emb|CBI21439.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 100/188 (53.19%), Postives = 128/188 (68.09%), Query Frame = 1
BLAST of Lsi10G005650 vs. NCBI nr
Match: gi|1009145061|ref|XP_015890129.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 146.7 bits (369), Expect = 4.3e-32 Identity = 110/237 (46.41%), Postives = 144/237 (60.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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