ClCG02G012780 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGAGTTGAACGGAGTGGTGGTCATGAGTATCACCATCGGCATCAACCGTCTCTGAAAGGCACAGTGAGTTTCTTTCTCTCTATCTCTACGGCTCTCTTCCACTCTCTCTGTTTTCGTACTCTGAAACCCACAAAGAAAACCAACCAATTGTGAGGAGAGAGATCACAGATTGAAAGATATGGTGAGGAAATGTAGAGGAGTTGCAGAGATTGCTGTCATGGAGGTCGACCTAAGAGCTACCAGACCTCCACCTGACAACAAGAGGAAGATCACCGCCGGAACAGACTTTGAAATCTCGACCACGACGACCTCGTTTCTCAAGCTCCGGAGCCGCCGACGCCGTGTTCTTTTGCCAGAGAATTCGGTTCCGCCGGCGGAGAGAACCTCTGTTAGCCCTACCTCCGATGACGATGGGTCCACCTTTTGCTGCTCCGGTAATGCTTGCAGCGAGATTCTTGAGGAGAGCATCAAGTTCGTAGATCTGGAGGTCGCAATTTTTTAACTCTAAATTGATTCCGAGCTCTTTGTTTGTTTGTTTCTGTGACTTGTGAATTCTGTTTTTGATTTCGTTTGTTTCTGAAAATTTTGTGTTCATATTACTTTTGGCAGGATGAGAATGATGAACATGGAGTCGCGTTCAAATCCAGCCGAGAAAGGTTTTAATTAATTTTCTACTGATCTCGATCTGAAATTGTTGTATCTTCCTTTGAATTTTTGAATTCAAAATTCGAAGAAAGAGTGTTTCAGAAACGGACTTGACCTCCATTAAACTAATTAATTAATGAATTGCTTCCGTTTGTGATTTTAATTCCTCTCTCTTTCGTCCATAAATACACAGTTTGCGATTACAGTCTCATAAATCTTCACACTCTGATCCGTTCTTCCTTTTCATCTTCTTGCAGCAGAGAGACGACTCCGTCTAGCGAATTCCGATTACCGCAGTCCGGCGATATGGAGTCTCCGGCAAGGAAAAGCGAAGCAACTTCCGGCAATAGATCTTCGTCTTCGGTGAAGATGCCGGCGGAATCGGAGCTGGAAGAATTCTTCATCGCCGCCGAGAAAAACATCCAGAAACGTTTCGCTGAGAAGTAAGTTTAATGGAGGATGCATAGCTAATAGCTTCTTCAAATTTTCTTGTAGCCATGGAAGAAATTAACAGAGTTCGAAAATTGTGAACACAAATTGCAGGTATAATTACGATATTGTTGAGGATGTTCCGTTGGAAGGACGTTACGAATGGGTTCGAGTAAAGCCATAAGAACAAAATCAAGAAATTAAATAATATTAATTAGGCTTAAACCTCCATTAGTATTCAATCGATCTACCTTCTTTGTAAACTTCCTTCTCCTTAATTCTCTTCTTTTTCCTTCTAATTTTGTACAGTTAGCATTCTGATCTCTATCATCATCTTGTAAAAGTAGAAAAGCCAAAGCTAATTTGTTCTTCGTACGATTCTTCACAGAAAAAGATATTGTAATTAAATTAGGAAGAAATTGAACAAACAAGATTCTTATTCGTGAAGATGAACGATCCAGCATCTAAAATTCCTCAGTTTGCAACACACGGTTTCCATTCTTCATTCTGGTACGATTCCCTGAAAATACCTCCTTATCTTTTTTTTTCTTTTTTTTGTCTCTCTTTTTTCCTATTTTAAATTAAATTTTAGTTATATTTTTGTGGACAGATTAGAAACGCC GTAGAGTTGAACGGAGTGGTGGTCATGAGTATCACCATCGGCATCAACCGTCTCTGAAAGGCACAGTGAGTTTCTTTCTCTCTATCTCTACGGCTCTCTTCCACTCTCTCTGTTTTCGTACTCTGAAACCCACAAAGAAAACCAACCAATTGTGAGGAGAGAGATCACAGATTGAAAGATATGGTGAGGAAATGTAGAGGAGTTGCAGAGATTGCTGTCATGGAGGTCGACCTAAGAGCTACCAGACCTCCACCTGACAACAAGAGGAAGATCACCGCCGGAACAGACTTTGAAATCTCGACCACGACGACCTCGTTTCTCAAGCTCCGGAGCCGCCGACGCCGTGTTCTTTTGCCAGAGAATTCGGTTCCGCCGGCGGAGAGAACCTCTGTTAGCCCTACCTCCGATGACGATGGGTCCACCTTTTGCTGCTCCGGTAATGCTTGCAGCGAGATTCTTGAGGAGAGCATCAAGTTCGTAGATCTGGAGGATGAGAATGATGAACATGGAGTCGCGTTCAAATCCAGCCGAGAAAGCAGAGAGACGACTCCGTCTAGCGAATTCCGATTACCGCAGTCCGGCGATATGGAGTCTCCGGCAAGGAAAAGCGAAGCAACTTCCGGCAATAGATCTTCGTCTTCGGTGAAGATGCCGGCGGAATCGGAGCTGGAAGAATTCTTCATCGCCGCCGAGAAAAACATCCAGAAACGTTTCGCTGAGAAGTATAATTACGATATTGTTGAGGATGTTCCGTTGGAAGGACGTTACGAATGGGTTCGAGTAAAGCCATAAGAACAAAATCAAGAAATTAAATAATATTAATTAGGCTTAAACCTCCATTAGTATTCAATCGATCTACCTTCTTTGTAAACTTCCTTCTCCTTAATTCTCTTCTTTTTCCTTCTAATTTTGTACAGTTAGCATTCTGATCTCTATCATCATCTTGTAAAAGTAGAAAAGCCAAAGCTAATTTGTTCTTCGTACGATTCTTCACAGAAAAAGATATTGTAATTAAATTAGGAAGAAATTGAACAAACAAGATTCTTATTCGTGAAGATGAACGATCCAGCATCTAAAATTCCTCAGTTTGCAACACACGGTTTCCATTCTTCATTCTGGTACGATTCCCTGAAAATACCTCCTTATCTTTTTTTTTCTTTTTTTTGTCTCTCTTTTTTCCTATTTTAAATTAAATTTTAGTTATATTTTTGTGGACAGATTAGAAACGCC ATGGTGAGGAAATGTAGAGGAGTTGCAGAGATTGCTGTCATGGAGGTCGACCTAAGAGCTACCAGACCTCCACCTGACAACAAGAGGAAGATCACCGCCGGAACAGACTTTGAAATCTCGACCACGACGACCTCGTTTCTCAAGCTCCGGAGCCGCCGACGCCGTGTTCTTTTGCCAGAGAATTCGGTTCCGCCGGCGGAGAGAACCTCTGTTAGCCCTACCTCCGATGACGATGGGTCCACCTTTTGCTGCTCCGGTAATGCTTGCAGCGAGATTCTTGAGGAGAGCATCAAGTTCGTAGATCTGGAGGATGAGAATGATGAACATGGAGTCGCGTTCAAATCCAGCCGAGAAAGCAGAGAGACGACTCCGTCTAGCGAATTCCGATTACCGCAGTCCGGCGATATGGAGTCTCCGGCAAGGAAAAGCGAAGCAACTTCCGGCAATAGATCTTCGTCTTCGGTGAAGATGCCGGCGGAATCGGAGCTGGAAGAATTCTTCATCGCCGCCGAGAAAAACATCCAGAAACGTTTCGCTGAGAAGTATAATTACGATATTGTTGAGGATGTTCCGTTGGAAGGACGTTACGAATGGGTTCGAGTAAAGCCATAA MVRKCRGVAEIAVMEVDLRATRPPPDNKRKITAGTDFEISTTTTSFLKLRSRRRRVLLPENSVPPAERTSVSPTSDDDGSTFCCSGNACSEILEESIKFVDLEDENDEHGVAFKSSRESRETTPSSEFRLPQSGDMESPARKSEATSGNRSSSSVKMPAESELEEFFIAAEKNIQKRFAEKYNYDIVEDVPLEGRYEWVRVKP
BLAST of ClCG02G012780 vs. Swiss-Prot
Match: KRP3_ARATH (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17 Identity = 68/222 (30.63%), Postives = 104/222 (46.85%), Query Frame = 1
BLAST of ClCG02G012780 vs. Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15 Identity = 53/138 (38.41%), Postives = 75/138 (54.35%), Query Frame = 1
BLAST of ClCG02G012780 vs. Swiss-Prot
Match: KRP1_ARATH (Cyclin-dependent kinase inhibitor 1 OS=Arabidopsis thaliana GN=KRP1 PE=1 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13 Identity = 58/181 (32.04%), Postives = 87/181 (48.07%), Query Frame = 1
BLAST of ClCG02G012780 vs. Swiss-Prot
Match: KRP4_ORYSJ (Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica GN=KRP4 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13 Identity = 53/160 (33.12%), Postives = 82/160 (51.25%), Query Frame = 1
BLAST of ClCG02G012780 vs. Swiss-Prot
Match: KRP6_ORYSJ (Cyclin-dependent kinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=KRP6 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.4e-12 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1
BLAST of ClCG02G012780 vs. TrEMBL
Match: W9QWF0_9ROSA (Cyclin-dependent kinase inhibitor 7 OS=Morus notabilis GN=L484_008262 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 9.6e-39 Identity = 112/252 (44.44%), Postives = 143/252 (56.75%), Query Frame = 1
BLAST of ClCG02G012780 vs. TrEMBL
Match: D7SVZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00800 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.6e-38 Identity = 97/188 (51.60%), Postives = 127/188 (67.55%), Query Frame = 1
BLAST of ClCG02G012780 vs. TrEMBL
Match: A0A0B0NPG0_GOSAR (Cyclin-dependent kinase inhibitor 7-like protein OS=Gossypium arboreum GN=F383_16914 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 9.3e-34 Identity = 99/218 (45.41%), Postives = 135/218 (61.93%), Query Frame = 1
BLAST of ClCG02G012780 vs. TrEMBL
Match: A0A067KI15_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12376 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 7.8e-33 Identity = 89/174 (51.15%), Postives = 113/174 (64.94%), Query Frame = 1
BLAST of ClCG02G012780 vs. TrEMBL
Match: A0A0D2SNW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G211800 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.9e-32 Identity = 99/218 (45.41%), Postives = 129/218 (59.17%), Query Frame = 1
BLAST of ClCG02G012780 vs. TAIR10
Match: AT1G49620.1 (AT1G49620.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 84.7 bits (208), Expect = 7.0e-17 Identity = 53/138 (38.41%), Postives = 75/138 (54.35%), Query Frame = 1
BLAST of ClCG02G012780 vs. TAIR10
Match: AT5G48820.2 (AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase) HSP 1 Score: 79.3 bits (194), Expect = 3.0e-15 Identity = 68/240 (28.33%), Postives = 104/240 (43.33%), Query Frame = 1
BLAST of ClCG02G012780 vs. TAIR10
Match: AT2G23430.1 (AT2G23430.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 78.2 bits (191), Expect = 6.6e-15 Identity = 58/181 (32.04%), Postives = 87/181 (48.07%), Query Frame = 1
BLAST of ClCG02G012780 vs. TAIR10
Match: AT3G19150.1 (AT3G19150.1 KIP-related protein 6) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12 Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 1
BLAST of ClCG02G012780 vs. TAIR10
Match: AT2G32710.1 (AT2G32710.1 Cyclin-dependent kinase inhibitor family protein) HSP 1 Score: 68.9 bits (167), Expect = 4.0e-12 Identity = 40/110 (36.36%), Postives = 57/110 (51.82%), Query Frame = 1
BLAST of ClCG02G012780 vs. NCBI nr
Match: gi|359480685|ref|XP_002282199.2| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X2 [Vitis vinifera]) HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42 Identity = 107/228 (46.93%), Postives = 141/228 (61.84%), Query Frame = 1
BLAST of ClCG02G012780 vs. NCBI nr
Match: gi|731397270|ref|XP_010652818.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Vitis vinifera]) HSP 1 Score: 177.2 bits (448), Expect = 3.0e-41 Identity = 108/229 (47.16%), Postives = 142/229 (62.01%), Query Frame = 1
BLAST of ClCG02G012780 vs. NCBI nr
Match: gi|703091494|ref|XP_010094374.1| (Cyclin-dependent kinase inhibitor 7 [Morus notabilis]) HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38 Identity = 112/252 (44.44%), Postives = 143/252 (56.75%), Query Frame = 1
BLAST of ClCG02G012780 vs. NCBI nr
Match: gi|296082434|emb|CBI21439.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 166.4 bits (420), Expect = 5.2e-38 Identity = 97/188 (51.60%), Postives = 127/188 (67.55%), Query Frame = 1
BLAST of ClCG02G012780 vs. NCBI nr
Match: gi|1009145061|ref|XP_015890129.1| (PREDICTED: cyclin-dependent kinase inhibitor 7-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36 Identity = 108/237 (45.57%), Postives = 143/237 (60.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |