CmoCh20G010110 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G010110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	F-box family protein
Location	Cmo_Chr20 : 6505767 .. 6508353 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCATACAGCGAAGTTCATGCGGGAGAGGATGAGATGAGAACGCCCTGGTGGCGGCCTCCTAGATTCCATGGAAACTGATAAAAGTTACCTAAATATTTTGGATATTTTTGGAGGTCAGAATCTAGAAATCATGGCGGTATGATGTCAACATCCTTTCTGTCTCTTTCTCTTTCTCCTTCTGTGGAATCTTCCACCTGCTTTTTTATGGTTCTCTTCTGCCATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGTAATTGATGTTAATTTCGGTTTTCTTTATGAATTTCTTTTGTTCAATTGCTTTTGTTCTTGTTCCTAATTTTGGGGGTTTCTGCGGAAAATTTTCCGGAAAAACGCAGGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATGTAATCCCTCTCTCTCTAGAATGATGAAACGAGTTTTTCAAAATCGCAGGATAATCAATTCAATCGGCTTTCTGTTTCCATTGTGTGTTTATCATTAATCAGGCAATTTGATTATGAACCACATAAACAGAGGTTTCTCTTATGATTGGAGTCTCCGAAAATGAAATGCTGGAGAAAGTTCTCTAAAATTGTTTTTATAAAGCTTTGTTAGATTCTTGATGGTTATGGTTATGGCTATGGCTGCCTTCATTGTTCTAGTGTCTAGTCGAGCAATGTTCTAGCCCATGATTCTGTTGTAATTTGTGCCTTTTCAGCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGGTATCATATTATCTTATCTTTACTCCAAACATGTCTGCATAAATAGCCCTTCAAATTGGCCTCAATGTGTGAATCAGAGTATGAGTTTAGGTGGAAATTGAGTAGGATATTTGTTGTTTCTATCTTCATTGATCTTTGCACCATTATGTTTTCAGTATTTTCTTACTTATTTTGGATCTTCTAGTGTCTATCTTCGAAAAGTAAACAACAACTTGAGAAATCATCCTGTCCTGAAGTTATTTCATGTTCTTCAGAGGAATTTAGGAGGCAGTTTTAGACAACATTTTGTATTCTCTGCTTCCAGAACCTTTTTGAAGTTCGAGGTTATTCTTAGGAATCACGGACCTCACAATGGTATGATATTGTCCACTTTGAGTATAAGTTCTCATGGCTTTGCTTTGGACTTCCCAAAAAGCTTCATGCCAATGGAGATCTATTCCTGACTTATAAATTCAGGATCATTCCCAAAATTAGTCAACGTGGGACTCCCTCCCAATAATCCTCAACAGTTATTACCGTGCTGATTGCTTGTGTCTATAGGCTACCTCTCTTATCCGCTTCTCTACAAGGTTGACTTTCTTCTTCCTTCAGATTGGACCAAGTCTTTAGGTTGTTTAAGTAGGTGGACTAGGTTAGGTTGATGTTTTGGAGTGATCTTCGATCAGGGTCGTCACATCCACTTTCCACGTTCTGATGTTGTACATGATTCATTAAAATTTTGCATTTGGTTGTGTTCCCAGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGGTGAACATTCTAAGAAACTCCTCTTCCATTGCAGTGCCTTTCTCGAGGTCTATGAACCATATAACACCATTCATGACTTGCACAATCTTTAATCACTGCATTTCTTCCTTCCTTTCTGCAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGAAATATATGCTCTAATATTGTATCCTGTAAAGCTTCCATTTTAAGCATGTCTTCATCCTTGTGTTTTTCCTTATTCTTCCACCACCAATAAGCTGCCTATGGTTCTTCCAGTTCATCTAAAACTGAACTATTTTCTCCTCAAGTAAATATAATAAGGGTATGTAAAAACTATGCTGTCTTATTTTGGGGCTAAATGTATTTGTATCCCTATGGTCCCATAAATACATTTCTTTGGTTCCTCAACCTTAAGATTTGGCCAGTAATTTCTTTAGATCCAACTAATTCTTTTACTTGTTCAAGGTGTTCATATCAGC

mRNA sequence

ATCCATACAGCGAAGTTCATGCGGGAGAGGATGAGATGAGAACGCCCTGGTGGCGGCCTCCTAGATTCCATGGAAACTGATAAAAGTTACCTAAATATTTTGGATATTTTTGGAGGTCAGAATCTAGAAATCATGGCGGTATGATGTCAACATCCTTTCTGTCTCTTTCTCTTTCTCCTTCTGTGGAATCTTCCACCTGCTTTTTTATGGTTCTCTTCTGCCATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGAAATATATGCTCTAATATTGTATCCTGTAAAGCTTCCATTTTAAGCATGTCTTCATCCTTGTGTTTTTCCTTATTCTTCCACCACCAATAAGCTGCCTATGGTTCTTCCAGTTCATCTAAAACTGAACTATTTTCTCCTCAAGTAAATATAATAAGGGTATGTAAAAACTATGCTGTCTTATTTTGGGGCTAAATGTATTTGTATCCCTATGGTCCCATAAATACATTTCTTTGGTTCCTCAACCTTAAGATTTGGCCAGTAATTTCTTTAGATCCAACTAATTCTTTTACTTGTTCAAGGTGTTCATATCAGC

Coding sequence (CDS)

ATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGA

Homology

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BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: FB302_ARATH (F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-85
Identity = 149/221 (67.42%), Postives = 183/221 (82.81%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           MD E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ R+E+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDST+RL+  A++L++LDISRSRWG  ITD+GL+QI+ A C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISR +SLQ+LN+GGTF+TD SL AIA+ C  LK+I +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 254
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LLLN+  P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

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BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: SKP2B_ARATH (F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-15
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 1


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

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BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: SKP2A_ARATH (F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-13
Identity = 54/208 (25.96%), Postives = 101/208 (48.56%), Query Frame = 1


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I +++    ++  A GVC  W++ +   L R   LS+    M          
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLR-LSWCNNNMNSLVLSLVPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L++LD+S+S    +ITD  L+  +LA+  P
Sbjct: 91  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSL---KITDRSLY--ALAHGCP 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 221
           +LT ++L G    +D  +  L      L+ LN+ G    VTD +L AI +NC  ++S+ L
Sbjct: 151 DLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNL 210

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BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 1


Query: 39  IDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE---------------- 98
           ID LP + L  IF  ++   + +    V ++W   V  S+ +KE                
Sbjct: 64  IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVS-SIRQKEIDVPSKITEDGDDCEG 123

Query: 99  --SLSFAGWKMDDDSTARLIRHAYS---LRDLDISRSRWGSQITDHGLHQISLANCIPNL 158
             S S  G K  D   A +         L  L I  S   ++++D GL   S+    P+L
Sbjct: 124 CLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSN-SAKVSDLGLR--SIGRSCPSL 183

Query: 159 TSISLWGMAGITDKGVVQLISRANSLQNLNVGG-TFVTDVSLLAIADNCPNLKSIVLWSC 218
            S+SLW ++ ITD G++++      L+ L +   + +TD  L+AIA +CPNL  + L +C
Sbjct: 184 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEAC 243

Query: 219 RHVTESGLLILVSKCRKLESINV 220
             + + GLL +   C KL+S+++
Sbjct: 244 SRIGDEGLLAIARSCSKLKSVSI 262

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BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: FBXL2_BOVIN (F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 1


Query: 59  DLAQACGVCRKWKEGVKLSLGRKESLSFAGW--KMDDDSTARLIRHAYSLRDLDISRSRW 118
           DL     +     +G+       E L+ + W  ++  D    L+R    LR L +   R 
Sbjct: 136 DLTSCVSITNSSLKGISEGCRHLEYLNLS-WCDQITKDGVEALVRGCRGLRALLL---RG 195

Query: 119 GSQITDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGT-FVTD 178
            +Q+ D  L  I   N    L S++L   + +TD GVVQL      LQ L + G   +TD
Sbjct: 196 CTQLEDEALKHIQ--NYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 255

Query: 179 VSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINV 220
            SL A+A NCP L+ +    C H+T++G  +L   C  LE +++
Sbjct: 256 ASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDL 293

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BLAST of CmoCh20G010110 vs. TrEMBL
Match: A0A0A0LPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G279180 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.5e-118
Identity = 212/234 (90.60%), Postives = 224/234 (95.73%), Query Frame = 1


Query: 22  RMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRK 81
           RMDSA VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR+
Sbjct: 3   RMDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRR 62

Query: 82  ESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSIS 141
           +SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG  ITDHGL++ISLA CIPNL SIS
Sbjct: 63  KSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSIS 122

Query: 142 LWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTE 201
           LWGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE
Sbjct: 123 LWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTE 182

Query: 202 SGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           +GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMW VV
Sbjct: 183 TGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWSVV 235

[Close]

BLAST of CmoCh20G010110 vs. TrEMBL
Match: W9SXB4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001772 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.2e-96
Identity = 173/216 (80.09%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIFAMITSFTDLAQA  VCRKWK+GVK SLGR+E+LSFAGWKMD
Sbjct: 1   MEGEAEIDRLPIDLLAHIFAMITSFTDLAQASSVCRKWKKGVKQSLGRRENLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+RHAYSL++LDISRSRWG QI+D+GL+QISLA C+ NLTSISLWGM GITDKG
Sbjct: 61  DDSTARLVRHAYSLKELDISRSRWGCQISDNGLYQISLAKCVSNLTSISLWGMTGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           V+QLISRA SL++LN+GGTF+TD SL AIAD CP LKSIVLWSCRHV+E+GLL+LV+KCR
Sbjct: 121 VLQLISRAKSLRHLNIGGTFITDESLYAIADGCPQLKSIVLWSCRHVSENGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLL 249
           KL+ INVWG RVPVDCFI L+ I P+LQIK+RSLLL
Sbjct: 181 KLKMINVWGTRVPVDCFIVLLTIRPALQIKTRSLLL 216

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BLAST of CmoCh20G010110 vs. TrEMBL
Match: A0A0B0NU42_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06272 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.8e-96
Identity = 175/223 (78.48%), Postives = 198/223 (88.79%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIF MITSFTDLAQA GVCRKWK+GVK +L R+++LSFAG+KMD
Sbjct: 1   MEQEAEIDRLPIDLLAHIFLMITSFTDLAQASGVCRKWKQGVKQALARRQTLSFAGFKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+ HAYSL++LDISRSRWG QITD+GL QISLA C+ NLTSISLWG+ GITDKG
Sbjct: 61  DDSTARLVHHAYSLKELDISRSRWGCQITDNGLCQISLAKCVSNLTSISLWGITGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLI+RANSLQ+LNVGGTF+TD SL AIAD+CP LKSIVLWSCR VTE+GL +LVSKCR
Sbjct: 121 VVQLITRANSLQHLNVGGTFITDESLSAIADSCPRLKSIVLWSCRQVTETGLFVLVSKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           KLESINVWG RVP+DCFIGL+ I P+LQIK + L LN M PVV
Sbjct: 181 KLESINVWGTRVPLDCFIGLLTIRPALQIKPQGLPLNVMLPVV 223

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BLAST of CmoCh20G010110 vs. TrEMBL
Match: A0A0D2RFH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G025500 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 5.3e-95
Identity = 173/223 (77.58%), Postives = 198/223 (88.79%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIF MITSFTDLAQA GVCRKWK+GVK +L R+++LSFAG+KMD
Sbjct: 1   MEQEAEIDRLPIDLLAHIFLMITSFTDLAQASGVCRKWKQGVKQALARRQTLSFAGFKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+ HAYSL++LDISRSRWG QITD+GL QISLA C+ +LTSISLWG+ GITDKG
Sbjct: 61  DDSTARLVHHAYSLKELDISRSRWGCQITDNGLCQISLAKCVSSLTSISLWGITGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VV+LI+RANSLQ+LNVGGTF+TD SL AIAD+CP LKSIVLWSCR VTE+GL +LVSKCR
Sbjct: 121 VVKLITRANSLQHLNVGGTFITDESLSAIADSCPRLKSIVLWSCRQVTETGLFVLVSKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           KLESINVWG RVP+DCFIGL+ I P+LQIK + L LN M PVV
Sbjct: 181 KLESINVWGTRVPLDCFIGLLTIRPALQIKPQGLPLNVMLPVV 223

[Close]

BLAST of CmoCh20G010110 vs. TrEMBL
Match: M5W3A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011044mg PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.7e-93
Identity = 171/223 (76.68%), Postives = 198/223 (88.79%), Query Frame = 1


Query: 36  EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDS 95
           E EIDRLPIDLLAHIF +ITSFTDLAQA  VCRKWK+GVK S+GR+ESLSF+GWKMDDDS
Sbjct: 4   EAEIDRLPIDLLAHIFVLITSFTDLAQASSVCRKWKQGVKQSMGRRESLSFSGWKMDDDS 63

Query: 96  TARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQ 155
           TARL+R+AY L++LDISRSRWG QI+D GL++ISLA CI +LTSISLWG+ GITDKGV Q
Sbjct: 64  TARLVRYAYCLKELDISRSRWGCQISDSGLYRISLAKCISSLTSISLWGITGITDKGVGQ 123

Query: 156 LISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLE 215
           LISRANSLQ+LN+GGTF+TD SL AIAD+CP+LK+IVLWSCRHVTE+GLL+LV+ CRKLE
Sbjct: 124 LISRANSLQHLNIGGTFITDESLHAIADSCPHLKTIVLWSCRHVTENGLLVLVNSCRKLE 183

Query: 216 SINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLN---SMWPVV 256
           SIN+WG RVPVDCFI L+ ISP+L+IK   LLLN   SM PVV
Sbjct: 184 SINLWGTRVPVDCFIALLTISPALKIKPVGLLLNVDASMLPVV 226

[Close]

BLAST of CmoCh20G010110 vs. TAIR10
Match: AT5G67140.1 (AT5G67140.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-86
Identity = 149/221 (67.42%), Postives = 183/221 (82.81%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           MD E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ R+E+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDST+RL+  A++L++LDISRSRWG  ITD+GL+QI+ A C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISR +SLQ+LN+GGTF+TD SL AIA+ C  LK+I +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 254
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LLLN+  P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]

BLAST of CmoCh20G010110 vs. TAIR10
Match: AT1G77000.1 (AT1G77000.1 RNI-like superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-16
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 1


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

[Close]

BLAST of CmoCh20G010110 vs. TAIR10
Match: AT1G21410.1 (AT1G21410.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 54/208 (25.96%), Postives = 101/208 (48.56%), Query Frame = 1


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I +++    ++  A GVC  W++ +   L R   LS+    M          
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLR-LSWCNNNMNSLVLSLVPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L++LD+S+S    +ITD  L+  +LA+  P
Sbjct: 91  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSL---KITDRSLY--ALAHGCP 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 221
           +LT ++L G    +D  +  L      L+ LN+ G    VTD +L AI +NC  ++S+ L
Sbjct: 151 DLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNL 210

[Close]

BLAST of CmoCh20G010110 vs. TAIR10
Match: AT2G25490.1 (AT2G25490.1 EIN3-binding F box protein 1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 1


Query: 39  IDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE---------------- 98
           ID LP + L  IF  ++   + +    V ++W   V  S+ +KE                
Sbjct: 64  IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVS-SIRQKEIDVPSKITEDGDDCEG 123

Query: 99  --SLSFAGWKMDDDSTARLIRHAYS---LRDLDISRSRWGSQITDHGLHQISLANCIPNL 158
             S S  G K  D   A +         L  L I  S   ++++D GL   S+    P+L
Sbjct: 124 CLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSN-SAKVSDLGLR--SIGRSCPSL 183

Query: 159 TSISLWGMAGITDKGVVQLISRANSLQNLNVGG-TFVTDVSLLAIADNCPNLKSIVLWSC 218
            S+SLW ++ ITD G++++      L+ L +   + +TD  L+AIA +CPNL  + L +C
Sbjct: 184 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEAC 243

Query: 219 RHVTESGLLILVSKCRKLESINV 220
             + + GLL +   C KL+S+++
Sbjct: 244 SRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of CmoCh20G010110 vs. TAIR10
Match: AT5G23340.1 (AT5G23340.1 RNI-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-11
Identity = 51/176 (28.98%), Postives = 92/176 (52.27%), Query Frame = 1


Query: 74  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYS-LRDLDISRSRWGSQITDHGLHQISLAN 133
           V+L L +  S SF     D D    +I   +  LR L++   +    ITD GL   S+  
Sbjct: 69  VELDLSQSISRSFYPGVTDSDLA--VISEGFKFLRVLNLHNCKG---ITDTGL--ASIGR 128

Query: 134 CIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGT-FVTDVSLLAIADNCPNLKSI 193
           C+  L  + +     ++DKG+  +    + L+ L++ G  F+TD SL ++++ C +L+++
Sbjct: 129 CLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEAL 188

Query: 194 VLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL 248
            L  C ++T+SGL  LV  CRK++S+++       D  +  VA + +  +K+  LL
Sbjct: 189 GLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLL 237

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|659115833|ref|XP_008457759.1| (PREDICTED: F-box protein At5g67140 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 3.7e-118
Identity = 212/233 (90.99%), Postives = 224/233 (96.14%), Query Frame = 1


Query: 23  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE 82
           MDS  VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR++
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60

Query: 83  SLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISL 142
           SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG QITDHGL++ISLA CIPNL SISL
Sbjct: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISL 120

Query: 143 WGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTES 202
           WGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE+
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 180

Query: 203 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMWPVV
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWPVV 232

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|449463955|ref|XP_004149695.1| (PREDICTED: F-box protein At5g67140-like [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 6.4e-118
Identity = 212/234 (90.60%), Postives = 224/234 (95.73%), Query Frame = 1


Query: 22  RMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRK 81
           RMDSA VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR+
Sbjct: 3   RMDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRR 62

Query: 82  ESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSIS 141
           +SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG  ITDHGL++ISLA CIPNL SIS
Sbjct: 63  KSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSIS 122

Query: 142 LWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTE 201
           LWGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE
Sbjct: 123 LWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTE 182

Query: 202 SGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           +GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMW VV
Sbjct: 183 TGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWSVV 235

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|659115831|ref|XP_008457758.1| (PREDICTED: F-box protein At5g67140-like [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97
Identity = 179/220 (81.36%), Postives = 199/220 (90.45%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+   EIDRLPIDLLA IFAMIT F+DLAQA GVCRKWK+GV++S+GR++SLSFAGWKM 
Sbjct: 1   MESAVEIDRLPIDLLADIFAMITYFSDLAQARGVCRKWKDGVEMSIGRRKSLSFAGWKMK 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARLIRH +SLR+LD SRS WG QITDHGL+QISLA CIPNL SISLWGM GITDKG
Sbjct: 61  DDSTARLIRHEHSLRELDFSRSHWGCQITDHGLNQISLAKCIPNLKSISLWGMVGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISRANSLQNLN+GGT++TD+SLLAIA+NCPNLK+IVLW CR VTESGLLILV KC 
Sbjct: 121 VVQLISRANSLQNLNIGGTYITDISLLAIANNCPNLKTIVLWCCRLVTESGLLILVRKCC 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMW 253
           KLESINVW MRVPVDCF+GLVAISPSLQIKSRS +L+S W
Sbjct: 181 KLESINVWAMRVPVDCFVGLVAISPSLQIKSRS-VLDSTW 219

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|449463986|ref|XP_004149710.1| (PREDICTED: F-box protein At5g67140-like [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 1.8e-96
Identity = 173/220 (78.64%), Postives = 198/220 (90.00%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+   EIDRLPIDLLAHIFAMIT F+DLAQA GVCR+WK+GVK+S+GR++SLSFAGWK++
Sbjct: 1   MESAVEIDRLPIDLLAHIFAMITYFSDLAQARGVCRRWKDGVKMSIGRRKSLSFAGWKLE 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTA LIRH +SLR+LD SRS WG QITDHGL+QIS+A C+PNL SISLWGM  ITDKG
Sbjct: 61  DDSTAHLIRHEHSLRELDFSRSDWGCQITDHGLNQISIAKCVPNLKSISLWGMVRITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISRANSLQNLN+GGT++TD+SLLAIADNCPNLK+IVLW CR VTESGLLILV  C 
Sbjct: 121 VVQLISRANSLQNLNIGGTYITDISLLAIADNCPNLKTIVLWCCRLVTESGLLILVRNCH 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMW 253
           +LESINVW MRVP+DCF+GLVAISPSLQIKSRS +L+S W
Sbjct: 181 QLESINVWAMRVPIDCFVGLVAISPSLQIKSRS-VLDSTW 219

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|703157694|ref|XP_010111793.1| (hypothetical protein L484_001772 [Morus notabilis])

HSP 1 Score: 360.1 bits (923), Expect = 3.1e-96
Identity = 173/216 (80.09%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIFAMITSFTDLAQA  VCRKWK+GVK SLGR+E+LSFAGWKMD
Sbjct: 1   MEGEAEIDRLPIDLLAHIFAMITSFTDLAQASSVCRKWKKGVKQSLGRRENLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+RHAYSL++LDISRSRWG QI+D+GL+QISLA C+ NLTSISLWGM GITDKG
Sbjct: 61  DDSTARLVRHAYSLKELDISRSRWGCQISDNGLYQISLAKCVSNLTSISLWGMTGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           V+QLISRA SL++LN+GGTF+TD SL AIAD CP LKSIVLWSCRHV+E+GLL+LV+KCR
Sbjct: 121 VLQLISRAKSLRHLNIGGTFITDESLYAIADGCPQLKSIVLWSCRHVSENGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLL 249
           KL+ INVWG RVPVDCFI L+ I P+LQIK+RSLLL
Sbjct: 181 KLKMINVWGTRVPVDCFIVLLTIRPALQIKTRSLLL 216

The following BLAST results are available for this feature:

BLAST of CmoCh20G010110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB302_ARATH	1.9e-85	67.42	F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1	[more]
SKP2B_ARATH	4.6e-15	28.64	F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1	[more]
SKP2A_ARATH	3.3e-13	25.96	F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1	[more]
EBF1_ARATH	2.8e-12	28.57	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1	[more]
FBXL2_BOVIN	3.4e-10	30.49	F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1	[more]

BLAST of CmoCh20G010110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPU5_CUCSA	4.5e-118	90.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G279180 PE=4 SV=1	[more]
W9SXB4_9ROSA	2.2e-96	80.09	Uncharacterized protein OS=Morus notabilis GN=L484_001772 PE=4 SV=1	[more]
A0A0B0NU42_GOSAR	4.8e-96	78.48	Uncharacterized protein OS=Gossypium arboreum GN=F383_06272 PE=4 SV=1	[more]
A0A0D2RFH7_GOSRA	5.3e-95	77.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G025500 PE=4 SV=1	[more]
M5W3A0_PRUPE	1.7e-93	76.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011044mg PE=4 SV=1	[more]

BLAST of CmoCh20G010110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67140.1	1.1e-86	67.42	F-box/RNI-like superfamily protein	[more]
AT1G77000.1	2.6e-16	28.64	RNI-like superfamily protein	[more]
AT1G21410.1	1.8e-14	25.96	F-box/RNI-like superfamily protein	[more]
AT2G25490.1	1.6e-13	28.57	EIN3-binding F box protein 1	[more]
AT5G23340.1	7.2e-11	28.98	RNI-like superfamily protein	[more]

BLAST of CmoCh20G010110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115833\|ref\|XP_008457759.1\|	3.7e-118	90.99	PREDICTED: F-box protein At5g67140 [Cucumis melo]	[more]
gi\|449463955\|ref\|XP_004149695.1\|	6.4e-118	90.60	PREDICTED: F-box protein At5g67140-like [Cucumis sativus]	[more]
gi\|659115831\|ref\|XP_008457758.1\|	1.3e-97	81.36	PREDICTED: F-box protein At5g67140-like [Cucumis melo]	[more]
gi\|449463986\|ref\|XP_004149710.1\|	1.8e-96	78.64	PREDICTED: F-box protein At5g67140-like [Cucumis sativus]	[more]
gi\|703157694\|ref\|XP_010111793.1\|	3.1e-96	80.09	hypothetical protein L484_001772 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR006553	Leu-rich_rpt_Cys-con_subtyp

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G010110.1	CmoCh20G010110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 39..72 score: 3.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 38..72 score: 4.9
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 185..210 score: 6.4E-4coord: 103..133 score: 660.0coord: 134..159 score: 4.0coord: 160..184 score:
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 29..240 score: 7.0
None	No IPR available	unknown	SSF52047	RNI-like	coord: 93..232 score: 1.75

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G010110	Cucsa.367210	Cucumber (Gy14) v1	cgycmoB1016
CmoCh20G010110	CmaCh20G009950	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G010110	CmaCh02G005170	Cucurbita maxima (Rimu)	cmacmoB606
CmoCh20G010110	Cla020232	Watermelon (97103) v1	cmowmB528
CmoCh20G010110	Csa2G279180	Cucumber (Chinese Long) v2	cmocuB529
CmoCh20G010110	MELO3C020857	Melon (DHL92) v3.5.1	cmomeB488
CmoCh20G010110	ClCG02G012310	Watermelon (Charleston Gray)	cmowcgB497
CmoCh20G010110	CSPI02G14040	Wild cucumber (PI 183967)	cmocpiB535
CmoCh20G010110	Lsi10G005290	Bottle gourd (USVL1VR-Ls)	cmolsiB496
CmoCh20G010110	Cp4.1LG16g01260	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G010110	Cp4.1LG05g11740	Cucurbita pepo (Zucchini)	cmocpeB534
CmoCh20G010110	MELO3C020857.2	Melon (DHL92) v3.6.1	cmomedB565
CmoCh20G010110	CsaV3_2G016460	Cucumber (Chinese Long) v3	cmocucB0641
CmoCh20G010110	Cla97C02G038010	Watermelon (97103) v2	cmowmbB563
CmoCh20G010110	CsGy2G013840	Cucumber (Gy14) v2	cgybcmoB213
CmoCh20G010110	Carg25138	Silver-seed gourd	carcmoB0555

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh20G010110	CmoCh02G005280	Cucurbita moschata (Rifu)	cmocmoB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G010110	Silver-seed gourd	carcmoB0550
CmoCh20G010110	Cucumber (Chinese Long) v3	cmocucB0636
CmoCh20G010110	Cucumber (Chinese Long) v3	cmocucB0655
CmoCh20G010110	Watermelon (97103) v2	cmowmbB540
CmoCh20G010110	Watermelon (97103) v2	cmowmbB556
CmoCh20G010110	Wax gourd	cmowgoB0692
CmoCh20G010110	Wax gourd	cmowgoB0695
CmoCh20G010110	Cucumber (Gy14) v1	cgycmoB0222
CmoCh20G010110	Cucurbita maxima (Rimu)	cmacmoB649
CmoCh20G010110	Wild cucumber (PI 183967)	cmocpiB554
CmoCh20G010110	Cucumber (Chinese Long) v2	cmocuB548
CmoCh20G010110	Melon (DHL92) v3.5.1	cmomeB510
CmoCh20G010110	Watermelon (Charleston Gray)	cmowcgB477
CmoCh20G010110	Watermelon (Charleston Gray)	cmowcgB489
CmoCh20G010110	Watermelon (97103) v1	cmowmB510
CmoCh20G010110	Watermelon (97103) v1	cmowmB519
CmoCh20G010110	Bottle gourd (USVL1VR-Ls)	cmolsiB488
CmoCh20G010110	Bottle gourd (USVL1VR-Ls)	cmolsiB504
CmoCh20G010110	Cucumber (Gy14) v2	cgybcmoB208
CmoCh20G010110	Cucumber (Gy14) v2	cgybcmoB776
CmoCh20G010110	Melon (DHL92) v3.6.1	cmomedB586