CmoCh20G010110 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G010110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box family protein
LocationCmo_Chr20 : 6505767 .. 6508353 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCATACAGCGAAGTTCATGCGGGAGAGGATGAGATGAGAACGCCCTGGTGGCGGCCTCCTAGATTCCATGGAAACTGATAAAAGTTACCTAAATATTTTGGATATTTTTGGAGGTCAGAATCTAGAAATCATGGCGGTATGATGTCAACATCCTTTCTGTCTCTTTCTCTTTCTCCTTCTGTGGAATCTTCCACCTGCTTTTTTATGGTTCTCTTCTGCCATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGTAATTGATGTTAATTTCGGTTTTCTTTATGAATTTCTTTTGTTCAATTGCTTTTGTTCTTGTTCCTAATTTTGGGGGTTTCTGCGGAAAATTTTCCGGAAAAACGCAGGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATGTAATCCCTCTCTCTCTAGAATGATGAAACGAGTTTTTCAAAATCGCAGGATAATCAATTCAATCGGCTTTCTGTTTCCATTGTGTGTTTATCATTAATCAGGCAATTTGATTATGAACCACATAAACAGAGGTTTCTCTTATGATTGGAGTCTCCGAAAATGAAATGCTGGAGAAAGTTCTCTAAAATTGTTTTTATAAAGCTTTGTTAGATTCTTGATGGTTATGGTTATGGCTATGGCTGCCTTCATTGTTCTAGTGTCTAGTCGAGCAATGTTCTAGCCCATGATTCTGTTGTAATTTGTGCCTTTTCAGCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGGTATCATATTATCTTATCTTTACTCCAAACATGTCTGCATAAATAGCCCTTCAAATTGGCCTCAATGTGTGAATCAGAGTATGAGTTTAGGTGGAAATTGAGTAGGATATTTGTTGTTTCTATCTTCATTGATCTTTGCACCATTATGTTTTCAGTATTTTCTTACTTATTTTGGATCTTCTAGTGTCTATCTTCGAAAAGTAAACAACAACTTGAGAAATCATCCTGTCCTGAAGTTATTTCATGTTCTTCAGAGGAATTTAGGAGGCAGTTTTAGACAACATTTTGTATTCTCTGCTTCCAGAACCTTTTTGAAGTTCGAGGTTATTCTTAGGAATCACGGACCTCACAATGGTATGATATTGTCCACTTTGAGTATAAGTTCTCATGGCTTTGCTTTGGACTTCCCAAAAAGCTTCATGCCAATGGAGATCTATTCCTGACTTATAAATTCAGGATCATTCCCAAAATTAGTCAACGTGGGACTCCCTCCCAATAATCCTCAACAGTTATTACCGTGCTGATTGCTTGTGTCTATAGGCTACCTCTCTTATCCGCTTCTCTACAAGGTTGACTTTCTTCTTCCTTCAGATTGGACCAAGTCTTTAGGTTGTTTAAGTAGGTGGACTAGGTTAGGTTGATGTTTTGGAGTGATCTTCGATCAGGGTCGTCACATCCACTTTCCACGTTCTGATGTTGTACATGATTCATTAAAATTTTGCATTTGGTTGTGTTCCCAGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGGTGAACATTCTAAGAAACTCCTCTTCCATTGCAGTGCCTTTCTCGAGGTCTATGAACCATATAACACCATTCATGACTTGCACAATCTTTAATCACTGCATTTCTTCCTTCCTTTCTGCAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGAAATATATGCTCTAATATTGTATCCTGTAAAGCTTCCATTTTAAGCATGTCTTCATCCTTGTGTTTTTCCTTATTCTTCCACCACCAATAAGCTGCCTATGGTTCTTCCAGTTCATCTAAAACTGAACTATTTTCTCCTCAAGTAAATATAATAAGGGTATGTAAAAACTATGCTGTCTTATTTTGGGGCTAAATGTATTTGTATCCCTATGGTCCCATAAATACATTTCTTTGGTTCCTCAACCTTAAGATTTGGCCAGTAATTTCTTTAGATCCAACTAATTCTTTTACTTGTTCAAGGTGTTCATATCAGC

mRNA sequence

ATCCATACAGCGAAGTTCATGCGGGAGAGGATGAGATGAGAACGCCCTGGTGGCGGCCTCCTAGATTCCATGGAAACTGATAAAAGTTACCTAAATATTTTGGATATTTTTGGAGGTCAGAATCTAGAAATCATGGCGGTATGATGTCAACATCCTTTCTGTCTCTTTCTCTTTCTCCTTCTGTGGAATCTTCCACCTGCTTTTTTATGGTTCTCTTCTGCCATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGAAATATATGCTCTAATATTGTATCCTGTAAAGCTTCCATTTTAAGCATGTCTTCATCCTTGTGTTTTTCCTTATTCTTCCACCACCAATAAGCTGCCTATGGTTCTTCCAGTTCATCTAAAACTGAACTATTTTCTCCTCAAGTAAATATAATAAGGGTATGTAAAAACTATGCTGTCTTATTTTGGGGCTAAATGTATTTGTATCCCTATGGTCCCATAAATACATTTCTTTGGTTCCTCAACCTTAAGATTTGGCCAGTAATTTCTTTAGATCCAACTAATTCTTTTACTTGTTCAAGGTGTTCATATCAGC

Coding sequence (CDS)

ATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGA
Homology
[Close]
BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: FB302_ARATH (F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-85
Identity = 149/221 (67.42%), Postives = 183/221 (82.81%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           MD E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ R+E+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDST+RL+  A++L++LDISRSRWG  ITD+GL+QI+ A C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISR +SLQ+LN+GGTF+TD SL AIA+ C  LK+I +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 254
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LLLN+  P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]
BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: SKP2B_ARATH (F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-15
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 1 

Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

[Close]
BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: SKP2A_ARATH (F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-13
Identity = 54/208 (25.96%), Postives = 101/208 (48.56%), Query Frame = 1 

Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I +++    ++  A GVC  W++ +   L R   LS+    M          
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLR-LSWCNNNMNSLVLSLVPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L++LD+S+S    +ITD  L+  +LA+  P
Sbjct: 91  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSL---KITDRSLY--ALAHGCP 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 221
           +LT ++L G    +D  +  L      L+ LN+ G    VTD +L AI +NC  ++S+ L
Sbjct: 151 DLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNL 210

[Close]
BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 1 

Query: 39  IDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE---------------- 98
           ID LP + L  IF  ++   + +    V ++W   V  S+ +KE                
Sbjct: 64  IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVS-SIRQKEIDVPSKITEDGDDCEG 123

Query: 99  --SLSFAGWKMDDDSTARLIRHAYS---LRDLDISRSRWGSQITDHGLHQISLANCIPNL 158
             S S  G K  D   A +         L  L I  S   ++++D GL   S+    P+L
Sbjct: 124 CLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSN-SAKVSDLGLR--SIGRSCPSL 183

Query: 159 TSISLWGMAGITDKGVVQLISRANSLQNLNVGG-TFVTDVSLLAIADNCPNLKSIVLWSC 218
            S+SLW ++ ITD G++++      L+ L +   + +TD  L+AIA +CPNL  + L +C
Sbjct: 184 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEAC 243

Query: 219 RHVTESGLLILVSKCRKLESINV 220
             + + GLL +   C KL+S+++
Sbjct: 244 SRIGDEGLLAIARSCSKLKSVSI 262

[Close]
BLAST of CmoCh20G010110 vs. Swiss-Prot
Match: FBXL2_BOVIN (F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 1 

Query: 59  DLAQACGVCRKWKEGVKLSLGRKESLSFAGW--KMDDDSTARLIRHAYSLRDLDISRSRW 118
           DL     +     +G+       E L+ + W  ++  D    L+R    LR L +   R 
Sbjct: 136 DLTSCVSITNSSLKGISEGCRHLEYLNLS-WCDQITKDGVEALVRGCRGLRALLL---RG 195

Query: 119 GSQITDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGT-FVTD 178
            +Q+ D  L  I   N    L S++L   + +TD GVVQL      LQ L + G   +TD
Sbjct: 196 CTQLEDEALKHIQ--NYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 255

Query: 179 VSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINV 220
            SL A+A NCP L+ +    C H+T++G  +L   C  LE +++
Sbjct: 256 ASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDL 293

[Close]
BLAST of CmoCh20G010110 vs. TrEMBL
Match: A0A0A0LPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G279180 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.5e-118
Identity = 212/234 (90.60%), Postives = 224/234 (95.73%), Query Frame = 1 

Query: 22  RMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRK 81
           RMDSA VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR+
Sbjct: 3   RMDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRR 62

Query: 82  ESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSIS 141
           +SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG  ITDHGL++ISLA CIPNL SIS
Sbjct: 63  KSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSIS 122

Query: 142 LWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTE 201
           LWGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE
Sbjct: 123 LWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTE 182

Query: 202 SGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           +GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMW VV
Sbjct: 183 TGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWSVV 235

[Close]
BLAST of CmoCh20G010110 vs. TrEMBL
Match: W9SXB4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001772 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.2e-96
Identity = 173/216 (80.09%), Postives = 197/216 (91.20%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIFAMITSFTDLAQA  VCRKWK+GVK SLGR+E+LSFAGWKMD
Sbjct: 1   MEGEAEIDRLPIDLLAHIFAMITSFTDLAQASSVCRKWKKGVKQSLGRRENLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+RHAYSL++LDISRSRWG QI+D+GL+QISLA C+ NLTSISLWGM GITDKG
Sbjct: 61  DDSTARLVRHAYSLKELDISRSRWGCQISDNGLYQISLAKCVSNLTSISLWGMTGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           V+QLISRA SL++LN+GGTF+TD SL AIAD CP LKSIVLWSCRHV+E+GLL+LV+KCR
Sbjct: 121 VLQLISRAKSLRHLNIGGTFITDESLYAIADGCPQLKSIVLWSCRHVSENGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLL 249
           KL+ INVWG RVPVDCFI L+ I P+LQIK+RSLLL
Sbjct: 181 KLKMINVWGTRVPVDCFIVLLTIRPALQIKTRSLLL 216

[Close]
BLAST of CmoCh20G010110 vs. TrEMBL
Match: A0A0B0NU42_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06272 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.8e-96
Identity = 175/223 (78.48%), Postives = 198/223 (88.79%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIF MITSFTDLAQA GVCRKWK+GVK +L R+++LSFAG+KMD
Sbjct: 1   MEQEAEIDRLPIDLLAHIFLMITSFTDLAQASGVCRKWKQGVKQALARRQTLSFAGFKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+ HAYSL++LDISRSRWG QITD+GL QISLA C+ NLTSISLWG+ GITDKG
Sbjct: 61  DDSTARLVHHAYSLKELDISRSRWGCQITDNGLCQISLAKCVSNLTSISLWGITGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLI+RANSLQ+LNVGGTF+TD SL AIAD+CP LKSIVLWSCR VTE+GL +LVSKCR
Sbjct: 121 VVQLITRANSLQHLNVGGTFITDESLSAIADSCPRLKSIVLWSCRQVTETGLFVLVSKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           KLESINVWG RVP+DCFIGL+ I P+LQIK + L LN M PVV
Sbjct: 181 KLESINVWGTRVPLDCFIGLLTIRPALQIKPQGLPLNVMLPVV 223

[Close]
BLAST of CmoCh20G010110 vs. TrEMBL
Match: A0A0D2RFH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G025500 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 5.3e-95
Identity = 173/223 (77.58%), Postives = 198/223 (88.79%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIF MITSFTDLAQA GVCRKWK+GVK +L R+++LSFAG+KMD
Sbjct: 1   MEQEAEIDRLPIDLLAHIFLMITSFTDLAQASGVCRKWKQGVKQALARRQTLSFAGFKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+ HAYSL++LDISRSRWG QITD+GL QISLA C+ +LTSISLWG+ GITDKG
Sbjct: 61  DDSTARLVHHAYSLKELDISRSRWGCQITDNGLCQISLAKCVSSLTSISLWGITGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VV+LI+RANSLQ+LNVGGTF+TD SL AIAD+CP LKSIVLWSCR VTE+GL +LVSKCR
Sbjct: 121 VVKLITRANSLQHLNVGGTFITDESLSAIADSCPRLKSIVLWSCRQVTETGLFVLVSKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           KLESINVWG RVP+DCFIGL+ I P+LQIK + L LN M PVV
Sbjct: 181 KLESINVWGTRVPLDCFIGLLTIRPALQIKPQGLPLNVMLPVV 223

[Close]
BLAST of CmoCh20G010110 vs. TrEMBL
Match: M5W3A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011044mg PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.7e-93
Identity = 171/223 (76.68%), Postives = 198/223 (88.79%), Query Frame = 1 

Query: 36  EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDS 95
           E EIDRLPIDLLAHIF +ITSFTDLAQA  VCRKWK+GVK S+GR+ESLSF+GWKMDDDS
Sbjct: 4   EAEIDRLPIDLLAHIFVLITSFTDLAQASSVCRKWKQGVKQSMGRRESLSFSGWKMDDDS 63

Query: 96  TARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQ 155
           TARL+R+AY L++LDISRSRWG QI+D GL++ISLA CI +LTSISLWG+ GITDKGV Q
Sbjct: 64  TARLVRYAYCLKELDISRSRWGCQISDSGLYRISLAKCISSLTSISLWGITGITDKGVGQ 123

Query: 156 LISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLE 215
           LISRANSLQ+LN+GGTF+TD SL AIAD+CP+LK+IVLWSCRHVTE+GLL+LV+ CRKLE
Sbjct: 124 LISRANSLQHLNIGGTFITDESLHAIADSCPHLKTIVLWSCRHVTENGLLVLVNSCRKLE 183

Query: 216 SINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLN---SMWPVV 256
           SIN+WG RVPVDCFI L+ ISP+L+IK   LLLN   SM PVV
Sbjct: 184 SINLWGTRVPVDCFIALLTISPALKIKPVGLLLNVDASMLPVV 226

[Close]
BLAST of CmoCh20G010110 vs. TAIR10
Match: AT5G67140.1 (AT5G67140.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-86
Identity = 149/221 (67.42%), Postives = 183/221 (82.81%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           MD E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ R+E+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDST+RL+  A++L++LDISRSRWG  ITD+GL+QI+ A C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISR +SLQ+LN+GGTF+TD SL AIA+ C  LK+I +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 254
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LLLN+  P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]
BLAST of CmoCh20G010110 vs. TAIR10
Match: AT1G77000.1 (AT1G77000.1 RNI-like superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-16
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 1 

Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

[Close]
BLAST of CmoCh20G010110 vs. TAIR10
Match: AT1G21410.1 (AT1G21410.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 54/208 (25.96%), Postives = 101/208 (48.56%), Query Frame = 1 

Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I +++    ++  A GVC  W++ +   L R   LS+    M          
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLR-LSWCNNNMNSLVLSLVPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L++LD+S+S    +ITD  L+  +LA+  P
Sbjct: 91  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSL---KITDRSLY--ALAHGCP 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 221
           +LT ++L G    +D  +  L      L+ LN+ G    VTD +L AI +NC  ++S+ L
Sbjct: 151 DLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNL 210

[Close]
BLAST of CmoCh20G010110 vs. TAIR10
Match: AT2G25490.1 (AT2G25490.1 EIN3-binding F box protein 1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 1 

Query: 39  IDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE---------------- 98
           ID LP + L  IF  ++   + +    V ++W   V  S+ +KE                
Sbjct: 64  IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVS-SIRQKEIDVPSKITEDGDDCEG 123

Query: 99  --SLSFAGWKMDDDSTARLIRHAYS---LRDLDISRSRWGSQITDHGLHQISLANCIPNL 158
             S S  G K  D   A +         L  L I  S   ++++D GL   S+    P+L
Sbjct: 124 CLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSN-SAKVSDLGLR--SIGRSCPSL 183

Query: 159 TSISLWGMAGITDKGVVQLISRANSLQNLNVGG-TFVTDVSLLAIADNCPNLKSIVLWSC 218
            S+SLW ++ ITD G++++      L+ L +   + +TD  L+AIA +CPNL  + L +C
Sbjct: 184 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEAC 243

Query: 219 RHVTESGLLILVSKCRKLESINV 220
             + + GLL +   C KL+S+++
Sbjct: 244 SRIGDEGLLAIARSCSKLKSVSI 262

[Close]
BLAST of CmoCh20G010110 vs. TAIR10
Match: AT5G23340.1 (AT5G23340.1 RNI-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-11
Identity = 51/176 (28.98%), Postives = 92/176 (52.27%), Query Frame = 1 

Query: 74  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYS-LRDLDISRSRWGSQITDHGLHQISLAN 133
           V+L L +  S SF     D D    +I   +  LR L++   +    ITD GL   S+  
Sbjct: 69  VELDLSQSISRSFYPGVTDSDLA--VISEGFKFLRVLNLHNCKG---ITDTGL--ASIGR 128

Query: 134 CIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGT-FVTDVSLLAIADNCPNLKSI 193
           C+  L  + +     ++DKG+  +    + L+ L++ G  F+TD SL ++++ C +L+++
Sbjct: 129 CLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEAL 188

Query: 194 VLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL 248
            L  C ++T+SGL  LV  CRK++S+++       D  +  VA + +  +K+  LL
Sbjct: 189 GLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLL 237

[Close]
BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|659115833|ref|XP_008457759.1| (PREDICTED: F-box protein At5g67140 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 3.7e-118
Identity = 212/233 (90.99%), Postives = 224/233 (96.14%), Query Frame = 1 

Query: 23  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE 82
           MDS  VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR++
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60

Query: 83  SLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISL 142
           SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG QITDHGL++ISLA CIPNL SISL
Sbjct: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISL 120

Query: 143 WGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTES 202
           WGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE+
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 180

Query: 203 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMWPVV
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWPVV 232

[Close]
BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|449463955|ref|XP_004149695.1| (PREDICTED: F-box protein At5g67140-like [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 6.4e-118
Identity = 212/234 (90.60%), Postives = 224/234 (95.73%), Query Frame = 1 

Query: 22  RMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRK 81
           RMDSA VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR+
Sbjct: 3   RMDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRR 62

Query: 82  ESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSIS 141
           +SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG  ITDHGL++ISLA CIPNL SIS
Sbjct: 63  KSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSIS 122

Query: 142 LWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTE 201
           LWGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE
Sbjct: 123 LWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTE 182

Query: 202 SGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           +GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMW VV
Sbjct: 183 TGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWSVV 235

[Close]
BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|659115831|ref|XP_008457758.1| (PREDICTED: F-box protein At5g67140-like [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97
Identity = 179/220 (81.36%), Postives = 199/220 (90.45%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+   EIDRLPIDLLA IFAMIT F+DLAQA GVCRKWK+GV++S+GR++SLSFAGWKM 
Sbjct: 1   MESAVEIDRLPIDLLADIFAMITYFSDLAQARGVCRKWKDGVEMSIGRRKSLSFAGWKMK 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARLIRH +SLR+LD SRS WG QITDHGL+QISLA CIPNL SISLWGM GITDKG
Sbjct: 61  DDSTARLIRHEHSLRELDFSRSHWGCQITDHGLNQISLAKCIPNLKSISLWGMVGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISRANSLQNLN+GGT++TD+SLLAIA+NCPNLK+IVLW CR VTESGLLILV KC 
Sbjct: 121 VVQLISRANSLQNLNIGGTYITDISLLAIANNCPNLKTIVLWCCRLVTESGLLILVRKCC 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMW 253
           KLESINVW MRVPVDCF+GLVAISPSLQIKSRS +L+S W
Sbjct: 181 KLESINVWAMRVPVDCFVGLVAISPSLQIKSRS-VLDSTW 219

[Close]
BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|449463986|ref|XP_004149710.1| (PREDICTED: F-box protein At5g67140-like [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 1.8e-96
Identity = 173/220 (78.64%), Postives = 198/220 (90.00%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+   EIDRLPIDLLAHIFAMIT F+DLAQA GVCR+WK+GVK+S+GR++SLSFAGWK++
Sbjct: 1   MESAVEIDRLPIDLLAHIFAMITYFSDLAQARGVCRRWKDGVKMSIGRRKSLSFAGWKLE 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTA LIRH +SLR+LD SRS WG QITDHGL+QIS+A C+PNL SISLWGM  ITDKG
Sbjct: 61  DDSTAHLIRHEHSLRELDFSRSDWGCQITDHGLNQISIAKCVPNLKSISLWGMVRITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISRANSLQNLN+GGT++TD+SLLAIADNCPNLK+IVLW CR VTESGLLILV  C 
Sbjct: 121 VVQLISRANSLQNLNIGGTYITDISLLAIADNCPNLKTIVLWCCRLVTESGLLILVRNCH 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMW 253
           +LESINVW MRVP+DCF+GLVAISPSLQIKSRS +L+S W
Sbjct: 181 QLESINVWAMRVPIDCFVGLVAISPSLQIKSRS-VLDSTW 219

[Close]
BLAST of CmoCh20G010110 vs. NCBI nr
Match: gi|703157694|ref|XP_010111793.1| (hypothetical protein L484_001772 [Morus notabilis])

HSP 1 Score: 360.1 bits (923), Expect = 3.1e-96
Identity = 173/216 (80.09%), Postives = 197/216 (91.20%), Query Frame = 1 

Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           M+ E EIDRLPIDLLAHIFAMITSFTDLAQA  VCRKWK+GVK SLGR+E+LSFAGWKMD
Sbjct: 1   MEGEAEIDRLPIDLLAHIFAMITSFTDLAQASSVCRKWKKGVKQSLGRRENLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDSTARL+RHAYSL++LDISRSRWG QI+D+GL+QISLA C+ NLTSISLWGM GITDKG
Sbjct: 61  DDSTARLVRHAYSLKELDISRSRWGCQISDNGLYQISLAKCVSNLTSISLWGMTGITDKG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           V+QLISRA SL++LN+GGTF+TD SL AIAD CP LKSIVLWSCRHV+E+GLL+LV+KCR
Sbjct: 121 VLQLISRAKSLRHLNIGGTFITDESLYAIADGCPQLKSIVLWSCRHVSENGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLL 249
           KL+ INVWG RVPVDCFI L+ I P+LQIK+RSLLL
Sbjct: 181 KLKMINVWGTRVPVDCFIVLLTIRPALQIKTRSLLL 216

The following BLAST results are available for this feature:
BLAST of CmoCh20G010110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB302_ARATH1.9e-8567.42F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1[more]
SKP2B_ARATH4.6e-1528.64F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1[more]
SKP2A_ARATH3.3e-1325.96F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1[more]
EBF1_ARATH2.8e-1228.57EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1[more]
FBXL2_BOVIN3.4e-1030.49F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1[more]
BLAST of CmoCh20G010110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPU5_CUCSA4.5e-11890.60Uncharacterized protein OS=Cucumis sativus GN=Csa_2G279180 PE=4 SV=1[more]
W9SXB4_9ROSA2.2e-9680.09Uncharacterized protein OS=Morus notabilis GN=L484_001772 PE=4 SV=1[more]
A0A0B0NU42_GOSAR4.8e-9678.48Uncharacterized protein OS=Gossypium arboreum GN=F383_06272 PE=4 SV=1[more]
A0A0D2RFH7_GOSRA5.3e-9577.58Uncharacterized protein OS=Gossypium raimondii GN=B456_003G025500 PE=4 SV=1[more]
M5W3A0_PRUPE1.7e-9376.68Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011044mg PE=4 SV=1[more]
BLAST of CmoCh20G010110 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G67140.11.1e-8667.42 F-box/RNI-like superfamily protein[more]
AT1G77000.12.6e-1628.64 RNI-like superfamily protein[more]
AT1G21410.11.8e-1425.96 F-box/RNI-like superfamily protein[more]
AT2G25490.11.6e-1328.57 EIN3-binding F box protein 1[more]
AT5G23340.17.2e-1128.98 RNI-like superfamily protein[more]
BLAST of CmoCh20G010110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115833|ref|XP_008457759.1|3.7e-11890.99PREDICTED: F-box protein At5g67140 [Cucumis melo][more]
gi|449463955|ref|XP_004149695.1|6.4e-11890.60PREDICTED: F-box protein At5g67140-like [Cucumis sativus][more]
gi|659115831|ref|XP_008457758.1|1.3e-9781.36PREDICTED: F-box protein At5g67140-like [Cucumis melo][more]
gi|449463986|ref|XP_004149710.1|1.8e-9678.64PREDICTED: F-box protein At5g67140-like [Cucumis sativus][more]
gi|703157694|ref|XP_010111793.1|3.1e-9680.09hypothetical protein L484_001772 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR006553Leu-rich_rpt_Cys-con_subtyp
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G010110.1CmoCh20G010110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 39..72
score: 3.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 38..72
score: 4.9
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 185..210
score: 6.4E-4coord: 103..133
score: 660.0coord: 134..159
score: 4.0coord: 160..184
score:
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 29..240
score: 7.0
NoneNo IPR availableunknownSSF52047RNI-likecoord: 93..232
score: 1.75

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G010110Cucsa.367210Cucumber (Gy14) v1cgycmoB1016
CmoCh20G010110CmaCh20G009950Cucurbita maxima (Rimu)cmacmoB551
CmoCh20G010110CmaCh02G005170Cucurbita maxima (Rimu)cmacmoB606
CmoCh20G010110Cla020232Watermelon (97103) v1cmowmB528
CmoCh20G010110Csa2G279180Cucumber (Chinese Long) v2cmocuB529
CmoCh20G010110MELO3C020857Melon (DHL92) v3.5.1cmomeB488
CmoCh20G010110ClCG02G012310Watermelon (Charleston Gray)cmowcgB497
CmoCh20G010110CSPI02G14040Wild cucumber (PI 183967)cmocpiB535
CmoCh20G010110Lsi10G005290Bottle gourd (USVL1VR-Ls)cmolsiB496
CmoCh20G010110Cp4.1LG16g01260Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G010110Cp4.1LG05g11740Cucurbita pepo (Zucchini)cmocpeB534
CmoCh20G010110MELO3C020857.2Melon (DHL92) v3.6.1cmomedB565
CmoCh20G010110CsaV3_2G016460Cucumber (Chinese Long) v3cmocucB0641
CmoCh20G010110Cla97C02G038010Watermelon (97103) v2cmowmbB563
CmoCh20G010110CsGy2G013840Cucumber (Gy14) v2cgybcmoB213
CmoCh20G010110Carg25138Silver-seed gourdcarcmoB0555
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G010110CmoCh02G005280Cucurbita moschata (Rifu)cmocmoB404
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G010110Cucurbita maxima (Rimu)cmacmoB649
CmoCh20G010110Wild cucumber (PI 183967)cmocpiB554
CmoCh20G010110Cucumber (Chinese Long) v2cmocuB548
CmoCh20G010110Melon (DHL92) v3.5.1cmomeB510
CmoCh20G010110Watermelon (Charleston Gray)cmowcgB477
CmoCh20G010110Watermelon (Charleston Gray)cmowcgB489
CmoCh20G010110Watermelon (97103) v1cmowmB510
CmoCh20G010110Watermelon (97103) v1cmowmB519
CmoCh20G010110Bottle gourd (USVL1VR-Ls)cmolsiB488
CmoCh20G010110Bottle gourd (USVL1VR-Ls)cmolsiB504
CmoCh20G010110Cucumber (Gy14) v2cgybcmoB208
CmoCh20G010110Cucumber (Gy14) v2cgybcmoB776
CmoCh20G010110Melon (DHL92) v3.6.1cmomedB586
CmoCh20G010110Silver-seed gourdcarcmoB0550
CmoCh20G010110Cucumber (Chinese Long) v3cmocucB0636
CmoCh20G010110Cucumber (Chinese Long) v3cmocucB0655
CmoCh20G010110Watermelon (97103) v2cmowmbB540
CmoCh20G010110Watermelon (97103) v2cmowmbB556
CmoCh20G010110Wax gourdcmowgoB0692
CmoCh20G010110Wax gourdcmowgoB0695
CmoCh20G010110Cucumber (Gy14) v1cgycmoB0222