CSPI02G14040 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAATGTGGCCCCATAAATGTTTAAGACCATGAAAAGCTATCATATGTATTTCCATTTTTGTGTGGATATCTTTGGAGCTCATAATCTTCAAACAACGTTGATAGAGCAATATGAAAATGATGTCAAATCATGGTTTATAAATGCTTTTTTTTCTCAACTCCTTTTCTTTGCTTCAAAGAAAATATACGATCAAGTGAATAACAACACCAGAGAGGAGAAGAGATGGAGTCGGCGGTGGAGATTGATCGGTTACCGATTGATCTATTGGCTCATATTTTTGCGATGATAACATACTTCAGCGATTTGGCTCAGTAACTTTTTTTTTTTTTTTTTCTTTTCTTCTTTTCTCCTACTTATTCTTTATGAATGCGTAATTTTGATTTTCTTGGATTGGTCTGTTAGGGCGAGGGGAGTGTGTAGAAGATGGAAAGATGGAGTTAAAATGTCAATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAATTGGAGGATGATTCCACTGCTCATCTTATTCGCCATGAACACAGTCTTCGAGAGCTTGATTTGTAATCATTCTCTTACTATCTTTGTATTCATTACAAAATGGCTGAAATTACTTTTTTTTTTCCTCGTTTTTAATAGGAATCCGTTAAATTTTGTGTTGGATTGAGTTAGAAAATTTAATAAAAAAAAGTTGAACCAAGGAGGTGAATTGTGCAAGTAAGGGGTTGGGGACTCGAGTTGACTCGGTCCAACCCAAATATGTATATAATATATAACTGTACCTAGCTATATAATTTTTAGGTGATTTTAGGTTTTAGGTTTGAATGTTTACATGCATTTACATACAGACGAATCGTAAAAAAGAGCAAATTTGACAAAATATTTACAACATATAACAAAATTTCAAATTTAATAGACACTAGTATGTTTCTATTAATAACAGTGATAGAAGTTTATTAGTTTCTATCAGATAGAATCTAAAATTTTGAAATATTTTAATTTATTTTGTTATATTTGAAAATGTCATATATATATATATATATCACCTTACACCTTGAATTACCATTTGTTCACATTTCATATTCAAAAATAAATGTTCAATGATTTTTTGATTGGTTGGTTGGGTTGGGTTGACCGTTACCTATTGAATCAATATATATATTGTGATAGTTTGTATTAATTCATAGTTTTTTTTCACCCTTAATGTTTAATGGATTCGGATGCATGGATGACCAAAAAAATTAGAGAAGTAAAAAAACAAAAATATGTTAGAATAGCCGTAAGAGGAAAAAAAAAAAACAAACTTATGTGATTCTCTAAGTATAATATCTATATCTTTTTTTGTTTTCCAGCTCGAGAAGCGATTGGGGTTGCCAAATAACAGATCATGGATTGAACCAAATCTCTATTGCGAAGTGTGTTCCTAATCTTAAGTCCATTTCTCTTTGGGGTATGGTAAGGATCACCGACAAGGGCGTTGTGCAACTGGTAACGTTATTGTCTTACCCTTTCTATTTCGATTAATCATCATTCTCATCTACGTTAGTTATTCAGACAATTAGAAAAGATTTTTATCCGTTTTCTAGATTCTTTATCTTTGTCTTGGATCGATCATTGGGTTTAGACATATTGCTTCCTTGATGTATAATTGTTTCAAGATGATTTAGGTTTTTAAAATTTTGTTTTTATTTTTAGAATTCAACTCTCAACAACTCTCAATTGTTTAGCTTACGAAAATTGTAATCATCGTGAGAAATTGAGTAGAAGTGATTTAATTTTCAAAACCAAAACAGTTACCTAGTAGTCTTAAGTTCTATAAATTTTACTTCTTATACAATATTTATTGTTCATATCTTCATTTCTCTCTGCCAACGAGTTCTCTAACCTAATCACAATAATCCTATATGCTTCACTTGACTTCAACTGTTTTAAAATGTAGAAAACTAAGGGTTATTGGTTGACCTAGTTATAATAATCTTATGTCGAGTTTAGAGTGGAGACTTTTTAAATTTGTATCTGAAGGTGTAAAGCATCTTAGTTCGAGTTTATAGTTTTAGCGATGTATACTTATGTTGATATCCCCTTTGTATATATTTGATGTCCTTTCACAACTCATTAGCATTATTTCCACTTCCTTTTTGGTAACACTCCATTTTTGGTTGTGTTCAAAGATTTCAAGAGCCAACTCCTTGCAAAACCTAAACATTGGTGGCACCTATATAACAGATATATCATTGCTTGCAATAGCAGACAATTGTCCAAATTTAAAGGTGATTAATTATACTTCTCAATAATCTCTTTCAATTAATTAACCATTAGGGTTTTGCACAATCTTTAATGATCAGTTGCATAATTTCTTTTCTTAATTCTGCAGACCATTGTCCTATGGTGCTGTCGCCTTGTAACCGAGAGCGGACTTCTAATTCTCGTACGTAATTGTCACCAACTCGAGTCAATCAATGTTTGGGCAATGAGGGTTCCTATCGACTGTTTCGTCGGTTTGGTTGCGATAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTACGTGGGTGTAAAATATAATAGTATGTCACTTCAAATATAACCAAGAAATAATCAAGAAGTACGTTCATGATTCTATATACATATATATGTGGACTCCAAGTGGATATAAGTAAAGTATGTATTGCAATTTTTAAATTGTCACACACGATAATTACAATAAGTACAAAGGTACATAAAAACCAAG ATGGAGTCGGCGGTGGAGATTGATCGGTTACCGATTGATCTATTGGCTCATATTTTTGCGATGATAACATACTTCAGCGATTTGGCTCAGGCGAGGGGAGTGTGTAGAAGATGGAAAGATGGAGTTAAAATGTCAATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAATTGGAGGATGATTCCACTGCTCATCTTATTCGCCATGAACACAGTCTTCGAGAGCTTGATTTCTCGAGAAGCGATTGGGGTTGCCAAATAACAGATCATGGATTGAACCAAATCTCTATTGCGAAGTGTGTTCCTAATCTTAAGTCCATTTCTCTTTGGGGTATGGTAAGGATCACCGACAAGGGCGTTGTGCAACTGATTTCAAGAGCCAACTCCTTGCAAAACCTAAACATTGGTGGCACCTATATAACAGATATATCATTGCTTGCAATAGCAGACAATTGTCCAAATTTAAAGACCATTGTCCTATGGTGCTGTCGCCTTGTAACCGAGAGCGGACTTCTAATTCTCGTACGTAATTGTCACCAACTCGAGTCAATCAATGTTTGGGCAATGAGGGTTCCTATCGACTGTTTCGTCGGTTTGGTTGCGATAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTACGTGGGTGTAA ATGGAGTCGGCGGTGGAGATTGATCGGTTACCGATTGATCTATTGGCTCATATTTTTGCGATGATAACATACTTCAGCGATTTGGCTCAGGCGAGGGGAGTGTGTAGAAGATGGAAAGATGGAGTTAAAATGTCAATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAATTGGAGGATGATTCCACTGCTCATCTTATTCGCCATGAACACAGTCTTCGAGAGCTTGATTTCTCGAGAAGCGATTGGGGTTGCCAAATAACAGATCATGGATTGAACCAAATCTCTATTGCGAAGTGTGTTCCTAATCTTAAGTCCATTTCTCTTTGGGGTATGGTAAGGATCACCGACAAGGGCGTTGTGCAACTGATTTCAAGAGCCAACTCCTTGCAAAACCTAAACATTGGTGGCACCTATATAACAGATATATCATTGCTTGCAATAGCAGACAATTGTCCAAATTTAAAGACCATTGTCCTATGGTGCTGTCGCCTTGTAACCGAGAGCGGACTTCTAATTCTCGTACGTAATTGTCACCAACTCGAGTCAATCAATGTTTGGGCAATGAGGGTTCCTATCGACTGTTTCGTCGGTTTGGTTGCGATAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTACGTGGGTGTAA
BLAST of CSPI02G14040 vs. Swiss-Prot
Match: FB302_ARATH (F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 8.9e-76 Identity = 133/215 (61.86%), Postives = 168/215 (78.14%), Query Frame = 1
BLAST of CSPI02G14040 vs. Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of CSPI02G14040 vs. Swiss-Prot
Match: SKP2A_ARATH (F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11 Identity = 51/205 (24.88%), Postives = 96/205 (46.83%), Query Frame = 1
BLAST of CSPI02G14040 vs. Swiss-Prot
Match: SKP2B_ARATH (F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10 Identity = 53/206 (25.73%), Postives = 97/206 (47.09%), Query Frame = 1
BLAST of CSPI02G14040 vs. Swiss-Prot
Match: FB330_ARATH (F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.8e-10 Identity = 38/132 (28.79%), Postives = 78/132 (59.09%), Query Frame = 1
BLAST of CSPI02G14040 vs. TrEMBL
Match: A0A0A0LPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G279180 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 5.2e-99 Identity = 176/219 (80.37%), Postives = 198/219 (90.41%), Query Frame = 1
BLAST of CSPI02G14040 vs. TrEMBL
Match: W9SXB4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001772 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.3e-84 Identity = 153/215 (71.16%), Postives = 182/215 (84.65%), Query Frame = 1
BLAST of CSPI02G14040 vs. TrEMBL
Match: A0A0B0NU42_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06272 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.4e-83 Identity = 150/214 (70.09%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of CSPI02G14040 vs. TrEMBL
Match: A0A061DI07_THECC (F-box/RNI-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_000652 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.6e-82 Identity = 149/210 (70.95%), Postives = 177/210 (84.29%), Query Frame = 1
BLAST of CSPI02G14040 vs. TrEMBL
Match: A0A0D2RFH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G025500 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.6e-82 Identity = 148/214 (69.16%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of CSPI02G14040 vs. TAIR10
Match: AT5G67140.1 (AT5G67140.1 F-box/RNI-like superfamily protein) HSP 1 Score: 284.6 bits (727), Expect = 5.0e-77 Identity = 133/215 (61.86%), Postives = 168/215 (78.14%), Query Frame = 1
BLAST of CSPI02G14040 vs. TAIR10
Match: AT2G25490.1 (AT2G25490.1 EIN3-binding F box protein 1) HSP 1 Score: 72.8 bits (177), Expect = 3.0e-13 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of CSPI02G14040 vs. TAIR10
Match: AT1G21410.1 (AT1G21410.1 F-box/RNI-like superfamily protein) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12 Identity = 51/205 (24.88%), Postives = 96/205 (46.83%), Query Frame = 1
BLAST of CSPI02G14040 vs. TAIR10
Match: AT1G77000.1 (AT1G77000.1 RNI-like superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 5.7e-12 Identity = 53/206 (25.73%), Postives = 97/206 (47.09%), Query Frame = 1
BLAST of CSPI02G14040 vs. TAIR10
Match: AT3G58530.1 (AT3G58530.1 RNI-like superfamily protein) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11 Identity = 38/132 (28.79%), Postives = 78/132 (59.09%), Query Frame = 1
BLAST of CSPI02G14040 vs. NCBI nr
Match: gi|449463986|ref|XP_004149710.1| (PREDICTED: F-box protein At5g67140-like [Cucumis sativus]) HSP 1 Score: 448.0 bits (1151), Expect = 9.8e-123 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of CSPI02G14040 vs. NCBI nr
Match: gi|659115831|ref|XP_008457758.1| (PREDICTED: F-box protein At5g67140-like [Cucumis melo]) HSP 1 Score: 419.5 bits (1077), Expect = 3.7e-114 Identity = 205/220 (93.18%), Postives = 214/220 (97.27%), Query Frame = 1
BLAST of CSPI02G14040 vs. NCBI nr
Match: gi|659115833|ref|XP_008457759.1| (PREDICTED: F-box protein At5g67140 [Cucumis melo]) HSP 1 Score: 370.5 bits (950), Expect = 2.0e-99 Identity = 177/219 (80.82%), Postives = 199/219 (90.87%), Query Frame = 1
BLAST of CSPI02G14040 vs. NCBI nr
Match: gi|449463955|ref|XP_004149695.1| (PREDICTED: F-box protein At5g67140-like [Cucumis sativus]) HSP 1 Score: 368.6 bits (945), Expect = 7.5e-99 Identity = 176/219 (80.37%), Postives = 198/219 (90.41%), Query Frame = 1
BLAST of CSPI02G14040 vs. NCBI nr
Match: gi|703157694|ref|XP_010111793.1| (hypothetical protein L484_001772 [Morus notabilis]) HSP 1 Score: 320.9 bits (821), Expect = 1.8e-84 Identity = 153/215 (71.16%), Postives = 182/215 (84.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |