CmoCh20G000220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G000220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pollen preferential protein
Location	Cmo_Chr20 : 168748 .. 169197 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGCCGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGGCGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAGAGAAACCTAA

mRNA sequence

ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGCCGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGGCGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAGAGAAACCTAA

Coding sequence (CDS)

ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGCCGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGGCGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAGAGAAACCTAA

Homology

[Close]

BLAST of CmoCh20G000220 vs. TrEMBL
Match: A0A0A0L1Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279850 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.5e-62
Identity = 122/149 (81.88%), Postives = 128/149 (85.91%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKEDWGESLPSSYL 120
           LTVYKVPVGLCKK WNKRGKRR I K+N  A G    G +     GEKEDWGESLPSSYL
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGAGGKEWAGND--DGGGEKEDWGESLPSSYL 120

Query: 121 SSEDVELEKEMWDQFYGTGFWRTPSQRET 150
           SSED+ELEKEMW++FYGTGFWRTPSQRET
Sbjct: 121 SSEDIELEKEMWERFYGTGFWRTPSQRET 147

[Close]

BLAST of CmoCh20G000220 vs. TrEMBL
Match: A0A061GTT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041188 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.0e-31
Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           M + VL+RSPP TR+QP L  +     ++  +F EVAGGTAAECAA+CCC PC+++ LL+
Sbjct: 1   MTRQVLIRSPPLTRKQPFLLSEDQKTARKGKKFGEVAGGTAAECAAVCCCCPCTVLELLV 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKEDWGESLPSSYL 120
           L +Y+VP GL +KAW KR KR+ +TK+N+   G +   K GP  +  + +    +     
Sbjct: 61  LGLYRVPTGLYRKAW-KRRKRQRLTKKNQGLLGQS---KGGPTREELEAELDRMVGKVGQ 120

Query: 121 SSED-----VELEKEMWDQFYGTGFWRTPSQRET 150
              D     V+LEKEMWD+FYGTGFWR+PSQR+T
Sbjct: 121 DGNDESKGAVDLEKEMWDRFYGTGFWRSPSQRDT 150

[Close]

BLAST of CmoCh20G000220 vs. TrEMBL
Match: W9QVY0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017152 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-27
Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MN+ V++RSPP  R+ PLL +KS    +++ R  EVAG TAAEC A+CCC PC+++NLL+
Sbjct: 1   MNRQVVVRSPPLNRRTPLLPEKSAANGRDRRRIGEVAGRTAAECTAVCCCCPCTVVNLLV 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGE------------K 120
           L +YKVPVG+C++AW KR  RR +  +          G +  +   E            K
Sbjct: 61  LALYKVPVGICRRAWAKRRMRRQLLAKRNGLLQQRPAGPDACRSTVEELEAELRRVKEGK 120

Query: 121 EDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET 150
            D G     +   + D   E+EMWD+FY TGFWR+PSQRE+
Sbjct: 121 IDGGNGGGDAAFGAVDFP-EEEMWDRFYNTGFWRSPSQRES 160

[Close]

BLAST of CmoCh20G000220 vs. TrEMBL
Match: A0A067EDE1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031729mg PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 74/151 (49.01%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 6   LLRSPPET-RQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVY 65
           L+RSP  T R+QPLL      R   K  F E  GGT AECAA+CCC PC++MNLL+L VY
Sbjct: 6   LIRSPSLTQRRQPLLAKNGQERRGNK--FGEFVGGTTAECAAVCCCCPCTVMNLLVLAVY 65

Query: 66  KVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE--GPKHDGEKEDWGESLPSSYLSS 125
           KVP GLCKKAW K+ KR  I +R +   GG  +G    GP  + +     E L ++    
Sbjct: 66  KVPAGLCKKAWRKQRKRHRIARRKQ--VGGLLMGPTTGGPNAEEKVAQTEELLVAAADQQ 125

Query: 126 ED-----VELEKEMWDQFYGTGFWRTPSQRE 149
           E       ELEK MWD+F+G GFWR+PSQ+E
Sbjct: 126 EGEDEKAAELEKAMWDRFHGAGFWRSPSQKE 152

[Close]

BLAST of CmoCh20G000220 vs. TrEMBL
Match: V4UDA8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029482mg PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 6   LLRSPPET-RQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVY 65
           L+RSP  T R+QPLL      R   K  F E  GGT AECAA+CCC PC++MNLL+L VY
Sbjct: 6   LIRSPSLTQRRQPLLAKNGQERRGNK--FGEFVGGTTAECAAVCCCCPCTVMNLLVLAVY 65

Query: 66  KVPVGLCKKAWNKRGKRRHITKRNKAAA---GGATVGKEGPKHDGEKEDWGESLPSSYLS 125
           KVP GLCKKAW K+ KR  I +R +      G  T G    +   +KE+   +       
Sbjct: 66  KVPAGLCKKAWRKQRKRHRIARRKQVGGLLMGPTTGGPNAEEKVAQKEELLVAAADQQEG 125

Query: 126 SED--VELEKEMWDQFYGTGFWRTPSQRE 149
            ++   ELEK MWD+F+G GFWR+PSQ+E
Sbjct: 126 EDEKAAELEKAMWDRFHGGGFWRSPSQKE 152

[Close]

BLAST of CmoCh20G000220 vs. TAIR10
Match: AT2G27180.1 (AT2G27180.1 unknown protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25
Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSP----NRLKEKPRFAEVAGGTAAECAAICCCFPCSMM 60
           M ++V+L+SP     +      SP    +  KE+ +  EVAGG AAECAA+ CC PC+++
Sbjct: 1   MTRHVILKSPLLVSSEESTMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVV 60

Query: 61  NLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKED------ 120
           NL++L VYKVP  +CKKAW +  +RR   KR+   A     G E   H    E+      
Sbjct: 61  NLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATAEGSESTVHARLNEEDLTAEI 120

Query: 121 -WGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET 150
            + E   S    ++ V LE EM D+FYG GFWR+PSQ++T
Sbjct: 121 VFEECHVSGGELNDVVRLENEMLDRFYGAGFWRSPSQKDT 160

[Close]

BLAST of CmoCh20G000220 vs. TAIR10
Match: AT3G11690.1 (AT3G11690.1 unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-18
Identity = 62/174 (35.63%), Postives = 86/174 (49.43%), Query Frame = 1


Query: 14  RQQPLL----TDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVG 73
           R+QPLL    +  SP         AE  GGT A CAA+ CC PC ++NLL+L +YKVP G
Sbjct: 31  RRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKG 90

Query: 74  LCKKAWNKRGKRRHITKRNKAAAGGATVGK-------------------EGPKHDGEKED 133
           +C++A   R +RR    +N       T GK                        D E +D
Sbjct: 91  ICRRA--IRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDD 150

Query: 134 -------WGESLPSSYLSSEDVE--------LEKEMWDQFYGTGFWRTPSQRET 150
                   G+S+ + + + E+ +        LEKEMW++FYG GFWR+PSQRE+
Sbjct: 151 NFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQRES 202

[Close]

BLAST of CmoCh20G000220 vs. TAIR10
Match: AT5G06380.1 (AT5G06380.1 unknown protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 1


Query: 34  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRN----- 93
           AE  GGT A CAA+C C PCS++NL++L VYK+P GLC++A  +R +R+ + K+      
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAI-RRIRRKRLAKKEFVESG 83

Query: 94  -KAAAGGATVGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQR 150
            +   GG++     P    ++E+  E    + ++     LEKEMW +FY  GFWR+ SQ 
Sbjct: 84  REFGRGGSSQFAVHPLESRDEEEEEEEEDEAVIA-----LEKEMWSRFYSGGFWRSLSQA 139

[Close]

BLAST of CmoCh20G000220 vs. NCBI nr
Match: gi|449449000|ref|XP_004142253.1| (PREDICTED: uncharacterized protein LOC101219884 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 6.5e-62
Identity = 122/149 (81.88%), Postives = 128/149 (85.91%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKEDWGESLPSSYL 120
           LTVYKVPVGLCKK WNKRGKRR I K+N  A G    G +     GEKEDWGESLPSSYL
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGAGGKEWAGND--DGGGEKEDWGESLPSSYL 120

Query: 121 SSEDVELEKEMWDQFYGTGFWRTPSQRET 150
           SSED+ELEKEMW++FYGTGFWRTPSQRET
Sbjct: 121 SSEDIELEKEMWERFYGTGFWRTPSQRET 147

[Close]

BLAST of CmoCh20G000220 vs. NCBI nr
Match: gi|659097839|ref|XP_008449841.1| (PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 121/149 (81.21%), Postives = 126/149 (84.56%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ VLLRSPP TRQQPLL DKS N +KEK RFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNIVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKEDWGESLPSSYL 120
           LTVYKVPVGLCKK WNKRGKRR I K+N   AG    GKE    D EKEDWGESLPSSYL
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKN---AGAVVGGKEWGNDDREKEDWGESLPSSYL 120

Query: 121 SSEDVELEKEMWDQFYGTGFWRTPSQRET 150
           SSED+ELEKEMW++FYG GF RTPSQRET
Sbjct: 121 SSEDMELEKEMWERFYGNGFLRTPSQRET 146

[Close]

BLAST of CmoCh20G000220 vs. NCBI nr
Match: gi|590586119|ref|XP_007015616.1| (Uncharacterized protein TCM_041188 [Theobroma cacao])

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-30
Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           M + VL+RSPP TR+QP L  +     ++  +F EVAGGTAAECAA+CCC PC+++ LL+
Sbjct: 1   MTRQVLIRSPPLTRKQPFLLSEDQKTARKGKKFGEVAGGTAAECAAVCCCCPCTVLELLV 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKEDWGESLPSSYL 120
           L +Y+VP GL +KAW KR KR+ +TK+N+   G +   K GP  +  + +    +     
Sbjct: 61  LGLYRVPTGLYRKAW-KRRKRQRLTKKNQGLLGQS---KGGPTREELEAELDRMVGKVGQ 120

Query: 121 SSED-----VELEKEMWDQFYGTGFWRTPSQRET 150
              D     V+LEKEMWD+FYGTGFWR+PSQR+T
Sbjct: 121 DGNDESKGAVDLEKEMWDRFYGTGFWRSPSQRDT 150

[Close]

BLAST of CmoCh20G000220 vs. NCBI nr
Match: gi|703077180|ref|XP_010090525.1| (hypothetical protein L484_017152 [Morus notabilis])

HSP 1 Score: 129.4 bits (324), Expect = 5.2e-27
Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 1


Query: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MN+ V++RSPP  R+ PLL +KS    +++ R  EVAG TAAEC A+CCC PC+++NLL+
Sbjct: 1   MNRQVVVRSPPLNRRTPLLPEKSAANGRDRRRIGEVAGRTAAECTAVCCCCPCTVVNLLV 60

Query: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGE------------K 120
           L +YKVPVG+C++AW KR  RR +  +          G +  +   E            K
Sbjct: 61  LALYKVPVGICRRAWAKRRMRRQLLAKRNGLLQQRPAGPDACRSTVEELEAELRRVKEGK 120

Query: 121 EDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET 150
            D G     +   + D   E+EMWD+FY TGFWR+PSQRE+
Sbjct: 121 IDGGNGGGDAAFGAVDFP-EEEMWDRFYNTGFWRSPSQRES 160

[Close]

BLAST of CmoCh20G000220 vs. NCBI nr
Match: gi|567862790|ref|XP_006424049.1| (hypothetical protein CICLE_v10029482mg [Citrus clementina])

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-26
Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 6   LLRSPPET-RQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVY 65
           L+RSP  T R+QPLL      R   K  F E  GGT AECAA+CCC PC++MNLL+L VY
Sbjct: 6   LIRSPSLTQRRQPLLAKNGQERRGNK--FGEFVGGTTAECAAVCCCCPCTVMNLLVLAVY 65

Query: 66  KVPVGLCKKAWNKRGKRRHITKRNKAAA---GGATVGKEGPKHDGEKEDWGESLPSSYLS 125
           KVP GLCKKAW K+ KR  I +R +      G  T G    +   +KE+   +       
Sbjct: 66  KVPAGLCKKAWRKQRKRHRIARRKQVGGLLMGPTTGGPNAEEKVAQKEELLVAAADQQEG 125

Query: 126 SED--VELEKEMWDQFYGTGFWRTPSQRE 149
            ++   ELEK MWD+F+G GFWR+PSQ+E
Sbjct: 126 EDEKAAELEKAMWDRFHGGGFWRSPSQKE 152

The following BLAST results are available for this feature:

BLAST of CmoCh20G000220 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh20G000220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1Q3_CUCSA	4.5e-62	81.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279850 PE=4 SV=1	[more]
A0A061GTT8_THECC	7.0e-31	48.05	Uncharacterized protein OS=Theobroma cacao GN=TCM_041188 PE=4 SV=1	[more]
W9QVY0_9ROSA	3.6e-27	42.86	Uncharacterized protein OS=Morus notabilis GN=L484_017152 PE=4 SV=1	[more]
A0A067EDE1_CITSI	1.4e-26	49.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031729mg PE=4 SV=1	[more]
V4UDA8_9ROSI	1.4e-26	47.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029482mg PE=4 SV=1	[more]

BLAST of CmoCh20G000220 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27180.1	1.0e-25	40.63	unknown protein	[more]
AT3G11690.1	2.1e-18	35.63	unknown protein	[more]
AT5G06380.1	1.0e-17	40.16	unknown protein	[more]

BLAST of CmoCh20G000220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449000\|ref\|XP_004142253.1\|	6.5e-62	81.88	PREDICTED: uncharacterized protein LOC101219884 [Cucumis sativus]	[more]
gi\|659097839\|ref\|XP_008449841.1\|	1.4e-59	81.21	PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo]	[more]
gi\|590586119\|ref\|XP_007015616.1\|	1.0e-30	48.05	Uncharacterized protein TCM_041188 [Theobroma cacao]	[more]
gi\|703077180\|ref\|XP_010090525.1\|	5.2e-27	42.86	hypothetical protein L484_017152 [Morus notabilis]	[more]
gi\|567862790\|ref\|XP_006424049.1\|	2.0e-26	47.65	hypothetical protein CICLE_v10029482mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G000220.1	CmoCh20G000220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264	FAMILY NOT NAMED	coord: 14..149 score: 6.0
None	No IPR available	PANTHER	PTHR33264:SF5	EXPRESSED PROTEIN-RELATED	coord: 14..149 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G000220	Cucsa.153070	Cucumber (Gy14) v1	cgycmoB0423
CmoCh20G000220	Cla003156	Watermelon (97103) v1	cmowmB520
CmoCh20G000220	Csa4G279850	Cucumber (Chinese Long) v2	cmocuB538
CmoCh20G000220	MELO3C014692	Melon (DHL92) v3.5.1	cmomeB509
CmoCh20G000220	ClCG02G024100	Watermelon (Charleston Gray)	cmowcgB490
CmoCh20G000220	CSPI04G12870	Wild cucumber (PI 183967)	cmocpiB543
CmoCh20G000220	Lsi10G009560	Bottle gourd (USVL1VR-Ls)	cmolsiB484
CmoCh20G000220	Cp4.1LG16g09170	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G000220	MELO3C014692.2	Melon (DHL92) v3.6.1	cmomedB585
CmoCh20G000220	CsaV3_4G023240	Cucumber (Chinese Long) v3	cmocucB0645
CmoCh20G000220	Cla97C02G050320	Watermelon (97103) v2	cmowmbB557
CmoCh20G000220	Bhi10G000358	Wax gourd	cmowgoB0687
CmoCh20G000220	Carg06955	Silver-seed gourd	carcmoB0709

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G000220	Cucurbita maxima (Rimu)	cmacmoB550
CmoCh20G000220	Cucurbita maxima (Rimu)	cmacmoB607
CmoCh20G000220	Wild cucumber (PI 183967)	cmocpiB534
CmoCh20G000220	Cucurbita pepo (Zucchini)	cmocpeB535
CmoCh20G000220	Cucumber (Gy14) v2	cgybcmoB493
CmoCh20G000220	Silver-seed gourd	carcmoB1236
CmoCh20G000220	Cucumber (Chinese Long) v3	cmocucB0632
CmoCh20G000220	Cucurbita moschata (Rifu)	cmocmoB405
CmoCh20G000220	Cucumber (Gy14) v1	cgycmoB0398