Cp4.1LG16g09170 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGCCGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGGCGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAGAGAAACCTAA ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGCCGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGGCGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAGAGAAACCTAA ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGCCGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGGCGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAGAGAAACCTAA MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAGGATVGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
BLAST of Cp4.1LG16g09170 vs. TrEMBL
Match: A0A0A0L1Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279850 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 1.7e-61 Identity = 126/153 (82.35%), Postives = 132/153 (86.27%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TrEMBL
Match: A0A061GTT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041188 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 9.2e-31 Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TrEMBL
Match: W9QVY0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017152 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 8.1e-27 Identity = 73/161 (45.34%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TrEMBL
Match: A0A067EDE1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031729mg PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-26 Identity = 74/152 (48.68%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TrEMBL
Match: V4UDA8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029482mg PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-26 Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TAIR10
Match: AT2G27180.1 (AT2G27180.1 unknown protein) HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25 Identity = 66/161 (40.99%), Postives = 92/161 (57.14%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TAIR10
Match: AT3G11690.1 (AT3G11690.1 unknown protein) HSP 1 Score: 87.8 bits (216), Expect = 6.1e-18 Identity = 61/173 (35.26%), Postives = 86/173 (49.71%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. TAIR10
Match: AT5G06380.1 (AT5G06380.1 unknown protein) HSP 1 Score: 87.4 bits (215), Expect = 8.0e-18 Identity = 48/121 (39.67%), Postives = 70/121 (57.85%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. NCBI nr
Match: gi|449449000|ref|XP_004142253.1| (PREDICTED: uncharacterized protein LOC101219884 [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 2.5e-61 Identity = 126/153 (82.35%), Postives = 132/153 (86.27%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. NCBI nr
Match: gi|659097839|ref|XP_008449841.1| (PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo]) HSP 1 Score: 236.9 bits (603), Expect = 2.3e-59 Identity = 121/150 (80.67%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. NCBI nr
Match: gi|590586119|ref|XP_007015616.1| (Uncharacterized protein TCM_041188 [Theobroma cacao]) HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30 Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. NCBI nr
Match: gi|703077180|ref|XP_010090525.1| (hypothetical protein L484_017152 [Morus notabilis]) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26 Identity = 73/161 (45.34%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of Cp4.1LG16g09170 vs. NCBI nr
Match: gi|567862790|ref|XP_006424049.1| (hypothetical protein CICLE_v10029482mg [Citrus clementina]) HSP 1 Score: 127.1 bits (318), Expect = 2.6e-26 Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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