CmoCh19G005850 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G005850
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
LocationCmo_Chr19 : 6601614 .. 6602565 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCTGCAAATCATGATGAAGATGATGATATCGATGTTGATAAACACCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGACTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCATTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGGTCAGTCAGTTCTTGCGATGTTCTTGTTTTTTCTCTGTTTTTATAACATGGGTTTTGTTTATTTGGTGATATTAGAGGAAGGAGAAGCTAGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGGTTGCAGAAAAAAAAAAAACAGAGTATCTAATTTCATTACATTTTTGTCCATTTTCAAGAACTTGATATCAATTTTTGAATGTTGATGGCTTCAAAACAGACAGACACAGCTTCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGTAAGCACTCTGTTTCAAAAAAAAAAACAGAGCATTTTCCTGTTCTTCTTTGATTTTAAGCCATTTCTTCGCTTTGTTTCGCTGAAGGGAGGAGGAAATGGGGACACAGAGGGGGAGCTGAAAGGGAGAGGCCTGTGTTTGATTCCGGTGGAGTGTAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCGATGGCTATGGGGAGGAAGCTCTGA

mRNA sequence

ATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCTGCAAATCATGATGAAGATGATGATATCGATGTTGATAAACACCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGACTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCATTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAGGAAGGAGAAGCTAGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCTTCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGTAAGCACTCTGTTTCAAAAAAAAAAACAGAGCATTTTCCTGTTCTTCTTTGATTTTAAGCCATTTCTTCGCTTTGTTTCGCTGAAGGGAGGAGGAAATGGGGACACAGAGGGGGAGCTGAAAGGGAGAGGCCTGTGTTTGATTCCGGTGGAGTGTAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCGATGGCTATGGGGAGGAAGCTCTGA

Coding sequence (CDS)

ATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCTGCAAATCATGATGAAGATGATGATATCGATGTTGATAAACACCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGACTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCATTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAGGAAGGAGAAGCTAGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCTTCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGTAAGCACTCTGTTTCAAAAAAAAAAACAGAGCATTTTCCTGTTCTTCTTTGATTTTAAGCCATTTCTTCGCTTTGTTTCGCTGAAGGGAGGAGGAAATGGGGACACAGAGGGGGAGCTGAAAGGGAGAGGCCTGTGTTTGATTCCGGTGGAGTGTAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCGATGGCTATGGGGAGGAAGCTCTGA
Homology
[Close]
BLAST of CmoCh19G005850 vs. Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-24
Identity = 81/180 (45.00%), Postives = 96/180 (53.33%), Query Frame = 1 

Query: 81  SAHACSDSVKRKNGSNPET-TAIKPAPLSNQKASKKTKP-EAPCSAGHAK-RKEKLGERI 140
           S  AC+     K+ +   T T        N+K  KK K  +   S G AK RKE+LGERI
Sbjct: 105 SNDACTVDKSTKSSTKKRTGTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERI 164

Query: 141 TALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFL 200
            ALQQLVSP+GKTD ASVLHEAMGYIKFL +QIQVL SPYL  +                
Sbjct: 165 AALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINH---------------- 224

Query: 201 FFFDFKPFLRFVSLKGG-GNGDTEG-----ELKGRGLCLIPVECSLHLANCTVADFWSPA 252
                       SL GG   GD        +L+ RGLCL+PV  ++H+ N   ADFWSPA
Sbjct: 225 ------------SLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWSPA 256

[Close]
BLAST of CmoCh19G005850 vs. Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 109 NQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 168
           N+ A+KK +   P      K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 169 EQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNGDTEG-ELKGR 228
           +Q+ VL +PY+ +        Q+++Q               +S K     + E  EL+G 
Sbjct: 321 DQVTVLSTPYMKQ----GASNQQQQQ---------------ISGKSKSQDENENHELRGH 380

Query: 229 GLCLIPVECSLHLANCTVADFWSP 251
           GLCL+P+  +  +AN T ADFW+P
Sbjct: 381 GLCLVPISSTFPVANETTADFWTP 385

[Close]
BLAST of CmoCh19G005850 vs. Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-21
Identity = 69/179 (38.55%), Postives = 92/179 (51.40%), Query Frame = 1 

Query: 75  PQLGLRSAHACSDSVKRKNGS---NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKE 134
           P L     H  S   + KN S   +  +  +K     +Q A+K+ K EA   +   KRKE
Sbjct: 289 PALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKE 348

Query: 135 KLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKK 194
           K+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+Q+  L +PY+      S   Q+ 
Sbjct: 349 KMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSG--ASLQHQQS 408

Query: 195 KQSIFLFFFDFKPFLRFVSLKGGGNGDTEGELKGRGLCLIPVECSLHLANCTVADFWSP 251
             S  L                      E +L+ RGLCL+PV  +  + + T  DFW+P
Sbjct: 409 DHSTEL------------------EVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

[Close]
BLAST of CmoCh19G005850 vs. Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.3e-21
Identity = 86/263 (32.70%), Postives = 124/263 (47.15%), Query Frame = 1 

Query: 18  TFSQLLFSA-NHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQ 77
           + SQLL       E++ +++  HHH  +Q   Y        E          KQE  +  
Sbjct: 94  SLSQLLLGGLMMGEEEKMEMMNHHHHQNQHQSYQAKRIQNWEEQVLRHQASMKQESSNNN 153

Query: 78  -LGLRSA------HACSDSVKRKNGSNPE-------TTAIKPAPLSNQKASKKTKPEAPC 137
             G+ S+       +C+  +     +N         +       + +  A+KK K + P 
Sbjct: 154 SYGIMSSPNSPPNKSCATIINTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVPS 213

Query: 138 SAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYL--- 197
           S    K RKEKLG RI +L QLVSPFGKTDTASVL EA+GYI+FLH QI+ L  PY    
Sbjct: 214 SQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTP 273

Query: 198 DKNQLVSTLFQKKKQSIFL----FFFDFKPFLRFVSL------KGGGNGDTEGELKGRGL 252
            +N ++    Q+    IF        +     R VSL      K   N +   +L+ RGL
Sbjct: 274 SRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGL 333

[Close]
BLAST of CmoCh19G005850 vs. Swiss-Prot
Match: BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-20
Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 1 

Query: 129 RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLF 188
           RKEKLG RI AL QLVSPFGKTDTASVL EA+GYI+FL  QI+ L  PY       +   
Sbjct: 265 RKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRH 324

Query: 189 QKKKQSIFLFFFDFKPFL----RFVSLKGGGNGDTEG---------ELKGRGLCLIPVEC 248
           Q+  Q      F   P      + +  +G  +  T+          +L+ RGLCL+P+ C
Sbjct: 325 QQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISC 384

Query: 249 SLHLANCTVADFWSPAM 253
           +L + +   AD+W+PA+
Sbjct: 385 TLQVGSDNGADYWAPAL 401

[Close]
BLAST of CmoCh19G005850 vs. TrEMBL
Match: A0A0A0K7T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071650 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85
Identity = 186/282 (65.96%), Postives = 204/282 (72.34%), Query Frame = 1 

Query: 1   MAENQS-SGRDPKTAAATTFSQLLFSANHDEDDDIDVDKH-HHVHHQIFEYSVSSS---- 60
           MAENQS +G   +   ATTFSQLLFS +HD+DDD DVD      HHQIF+YSVSSS    
Sbjct: 1   MAENQSFTGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSSSS 60

Query: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120
           FAI+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPE  AIK       +ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPEMAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGG 240
           LHEAMGYIKFLHEQ+QVL SPYL K+QL+S+                       S  G G
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSS----------------------QSATGRG 240

Query: 241 NGDTEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRK 258
           N +TEG+LK RGLCLIPV+CSLHLANCTVADFWSPAMAMG+K
Sbjct: 241 NEETEGDLKSRGLCLIPVDCSLHLANCTVADFWSPAMAMGKK 253

[Close]
BLAST of CmoCh19G005850 vs. TrEMBL
Match: F6H6A3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00210 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-43
Identity = 124/281 (44.13%), Postives = 158/281 (56.23%), Query Frame = 1 

Query: 1   MAENQSSGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MA+++  G D  +  +  FSQLLFS   D+   +D+D+          ++ S SF+ E P
Sbjct: 1   MADSEGFGEDHLSGGS--FSQLLFS---DDVVGLDIDE---------SFAYSPSFSNEKP 60

Query: 61  PKMLCFGTKQEQ----EHPQLGLRSAHACSDSV-----------------KRKNGSN--- 120
           PKMLCFG  Q +    E  +   +S   CSDS                  K++NGS    
Sbjct: 61  PKMLCFGGYQSEVGFAEPTKTPQKSGVTCSDSSSASSTNNTNINKASKSNKKRNGSGNMS 120

Query: 121 -PETTAIKPAPLSNQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTAS 180
            P ++ +  AP   Q+ SKKTK E P S GH K +KEKLGERITALQQLVSPFGKTDTAS
Sbjct: 121 VPTSSGLAKAPAGGQRNSKKTKSENPTSGGHVKVKKEKLGERITALQQLVSPFGKTDTAS 180

Query: 181 VLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGG 240
           VLHEAMGYI+FL +Q+QVL SPYL       TL      S                 +GG
Sbjct: 181 VLHEAMGYIRFLQDQVQVLCSPYL------QTLPSSAHMS-----------------EGG 240

Query: 241 GNGDTEG--ELKGRGLCLIPVECSLHLANCTVADFWSPAMA 254
            NG+ +   +L+ RGLCL+PVEC+ H+AN   AD+WSPAMA
Sbjct: 241 ENGEEKSSKDLRSRGLCLVPVECTEHVANNNGADYWSPAMA 244

[Close]
BLAST of CmoCh19G005850 vs. TrEMBL
Match: V7BAZ7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.3e-42
Identity = 122/283 (43.11%), Postives = 148/283 (52.30%), Query Frame = 1 

Query: 17  TTFSQLLFSANHDEDDDIDVDKHHHVHHQIF--------------EYSVSSSFAIENPPK 76
           TTFSQLLF  +HD         HHH HH                   S S  F+   PPK
Sbjct: 18  TTFSQLLFGDDHDHH-------HHHDHHDATALPLPQDHSSYNHNNLSRSPLFSFHKPPK 77

Query: 77  MLCFGTKQEQEH---------PQLGLRSAHACSD----------------SVKRKNGSNP 136
           MLCFG  Q Q H         PQ  + ++   S                 S K++NG   
Sbjct: 78  MLCFGNHQNQPHLSLPPTTVTPQKSVITSSDSSSASSSNYTNTGFNSLPKSTKKRNGLGQ 137

Query: 137 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 196
           E   +    +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLH
Sbjct: 138 EP--VTKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLH 197

Query: 197 EAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNG 256
           EAMGYI+FLH+Q+QVL SPYL   Q +S+  Q +                      G N 
Sbjct: 198 EAMGYIRFLHDQVQVLCSPYL---QTLSSSDQHQHGD-------------------GENN 257

Query: 257 DTE--GELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 259
           + E   EL+ RGLCLIPV C++H+A+   ADFWSP  A+G+K+
Sbjct: 258 EEEVKKELRSRGLCLIPVGCTVHVASSNGADFWSPG-AIGKKV 268

[Close]
BLAST of CmoCh19G005850 vs. TrEMBL
Match: A0A0S3SM88_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G046400 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41
Identity = 117/275 (42.55%), Postives = 149/275 (54.18%), Query Frame = 1 

Query: 9   RDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGT 68
           +D      TTFSQLLF  + D    + +  HHH  +     S S  F+   PPKMLCFG 
Sbjct: 4   KDEFELTGTTFSQLLFGDDLDATPALPLP-HHHCSYDHHTLSASPLFSFHKPPKMLCFGN 63

Query: 69  KQEQEH--------PQLGLRSAHACS---------------DSVKRKNGSNPETTAIKPA 128
            Q Q H         +  + S+ + S                S K++NG   E   +   
Sbjct: 64  HQTQPHIPPTIVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTKKRNGLGQEP--VTKV 123

Query: 129 PLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKF 188
            +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLHEAMGYI+F
Sbjct: 124 GVGGQRLTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRF 183

Query: 189 LHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNGDTE--GEL 248
           LH+Q+QVL SPYL   Q +S+   + +                     G N + E   +L
Sbjct: 184 LHDQVQVLCSPYL---QSLSSSHHQHQHG------------------DGENNEEEVKKDL 243

Query: 249 KGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 259
           + RGLCLIPV C++H+A+   ADFWSP  A+G K+
Sbjct: 244 RSRGLCLIPVGCTVHVASSNGADFWSPG-AIGNKV 253

[Close]
BLAST of CmoCh19G005850 vs. TrEMBL
Match: A0A0L9U0G5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g240100 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41
Identity = 117/275 (42.55%), Postives = 149/275 (54.18%), Query Frame = 1 

Query: 9   RDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGT 68
           +D      TTFSQLLF  + D    + +  HHH  +     S S  F+   PPKMLCFG 
Sbjct: 4   KDEFELTGTTFSQLLFGDDLDATPALPLP-HHHCSYDHHTLSASPLFSFHKPPKMLCFGN 63

Query: 69  KQEQEH--------PQLGLRSAHACS---------------DSVKRKNGSNPETTAIKPA 128
            Q Q H         +  + S+ + S                S K++NG   E   +   
Sbjct: 64  HQTQPHIPPTIVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTKKRNGLGQEP--VTKV 123

Query: 129 PLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKF 188
            +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLHEAMGYI+F
Sbjct: 124 GVGGQRLTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRF 183

Query: 189 LHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNGDTE--GEL 248
           LH+Q+QVL SPYL   Q +S+   + +                     G N + E   +L
Sbjct: 184 LHDQVQVLCSPYL---QSLSSSHHQHQHG------------------DGENNEEEVKKDL 243

Query: 249 KGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 259
           + RGLCLIPV C++H+A+   ADFWSP  A+G K+
Sbjct: 244 RSRGLCLIPVGCTVHVASSNGADFWSPG-AIGNKV 253

[Close]
BLAST of CmoCh19G005850 vs. TAIR10
Match: AT3G19500.1 (AT3G19500.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-25
Identity = 81/180 (45.00%), Postives = 96/180 (53.33%), Query Frame = 1 

Query: 81  SAHACSDSVKRKNGSNPET-TAIKPAPLSNQKASKKTKP-EAPCSAGHAK-RKEKLGERI 140
           S  AC+     K+ +   T T        N+K  KK K  +   S G AK RKE+LGERI
Sbjct: 105 SNDACTVDKSTKSSTKKRTGTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERI 164

Query: 141 TALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFL 200
            ALQQLVSP+GKTD ASVLHEAMGYIKFL +QIQVL SPYL  +                
Sbjct: 165 AALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINH---------------- 224

Query: 201 FFFDFKPFLRFVSLKGG-GNGDTEG-----ELKGRGLCLIPVECSLHLANCTVADFWSPA 252
                       SL GG   GD        +L+ RGLCL+PV  ++H+ N   ADFWSPA
Sbjct: 225 ------------SLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWSPA 256

[Close]
BLAST of CmoCh19G005850 vs. TAIR10
Match: AT1G49830.1 (AT1G49830.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 77/221 (34.84%), Postives = 112/221 (50.68%), Query Frame = 1 

Query: 45  QIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNG---------- 104
           ++ E S    F   + P+MLCFG   + +   L  + + + +  +  +N           
Sbjct: 29  EVEEDSFGFRFTGNDAPQMLCFGGGNQNDTDLLFSQPSFSPASPLSSRNNACVVNDQSFR 88

Query: 105 SNPET-TAIKPAPLSNQKASKKTK-PEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTD 164
           SN +T +A     + + K  K+ K  +   S G+AK +KEK+GE+IT LQ LVSP+GKTD
Sbjct: 89  SNKKTGSADGHDRVCDPKPGKRCKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTD 148

Query: 165 TASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSL 224
            ASVLHE MGYIKFL +Q+QVL +PY   N L                 D       + +
Sbjct: 149 AASVLHETMGYIKFLQDQVQVLSTPYFKHNPLDDE--------------DTGEVNPTMKV 208

Query: 225 KGGGNGDTEGELKGRGLCLIPVECSLHLANCTVADFWSPAM 253
           K         EL+  GLCL+P+  ++H+AN   AD WS A+
Sbjct: 209 K---------ELRSNGLCLVPLAWTVHVANTNGADLWSSAI 226

[Close]
BLAST of CmoCh19G005850 vs. TAIR10
Match: AT1G61660.1 (AT1G61660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 6.4e-23
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 109 NQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 168
           N+ A+KK +   P      K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 169 EQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNGDTEG-ELKGR 228
           +Q+ VL +PY+ +        Q+++Q               +S K     + E  EL+G 
Sbjct: 321 DQVTVLSTPYMKQ----GASNQQQQQ---------------ISGKSKSQDENENHELRGH 380

Query: 229 GLCLIPVECSLHLANCTVADFWSP 251
           GLCL+P+  +  +AN T ADFW+P
Sbjct: 381 GLCLVPISSTFPVANETTADFWTP 385

[Close]
BLAST of CmoCh19G005850 vs. TAIR10
Match: AT3G20640.1 (AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 69/179 (38.55%), Postives = 92/179 (51.40%), Query Frame = 1 

Query: 75  PQLGLRSAHACSDSVKRKNGS---NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKE 134
           P L     H  S   + KN S   +  +  +K     +Q A+K+ K EA   +   KRKE
Sbjct: 289 PALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKE 348

Query: 135 KLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKK 194
           K+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+Q+  L +PY+      S   Q+ 
Sbjct: 349 KMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSG--ASLQHQQS 408

Query: 195 KQSIFLFFFDFKPFLRFVSLKGGGNGDTEGELKGRGLCLIPVECSLHLANCTVADFWSP 251
             S  L                      E +L+ RGLCL+PV  +  + + T  DFW+P
Sbjct: 409 DHSTEL------------------EVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

[Close]
BLAST of CmoCh19G005850 vs. TAIR10
Match: AT2G20100.1 (AT2G20100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 86/263 (32.70%), Postives = 124/263 (47.15%), Query Frame = 1 

Query: 18  TFSQLLFSA-NHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQ 77
           + SQLL       E++ +++  HHH  +Q   Y        E          KQE  +  
Sbjct: 94  SLSQLLLGGLMMGEEEKMEMMNHHHHQNQHQSYQAKRIQNWEEQVLRHQASMKQESSNNN 153

Query: 78  -LGLRSA------HACSDSVKRKNGSNPE-------TTAIKPAPLSNQKASKKTKPEAPC 137
             G+ S+       +C+  +     +N         +       + +  A+KK K + P 
Sbjct: 154 SYGIMSSPNSPPNKSCATIINTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVPS 213

Query: 138 SAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYL--- 197
           S    K RKEKLG RI +L QLVSPFGKTDTASVL EA+GYI+FLH QI+ L  PY    
Sbjct: 214 SQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTP 273

Query: 198 DKNQLVSTLFQKKKQSIFL----FFFDFKPFLRFVSL------KGGGNGDTEGELKGRGL 252
            +N ++    Q+    IF        +     R VSL      K   N +   +L+ RGL
Sbjct: 274 SRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGL 333

[Close]
BLAST of CmoCh19G005850 vs. NCBI nr
Match: gi|659110014|ref|XP_008455002.1| (PREDICTED: transcription factor bHLH113 [Cucumis melo])

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 187/280 (66.79%), Postives = 206/280 (73.57%), Query Frame = 1 

Query: 1   MAENQS-SGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSS---FA 60
           MAENQS +G   +   ATTFSQLLFS +HD+DDD DVD   + HHQIF+YSVSSS   FA
Sbjct: 1   MAENQSFAGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDKN-HHQIFDYSVSSSSSSFA 60

Query: 61  IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 120
           I+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGSNP
Sbjct: 61  IDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSNP 120

Query: 121 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           ET AIK       +ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 121 ETAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180

Query: 181 EAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNG 240
           EAMGYIKFLHEQ+QVL SPYL K+QL+S+                       S  G  NG
Sbjct: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSS----------------------QSATGKENG 240

Query: 241 DTEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRK 258
           +TEG+LK RGLCLIPV+CSLHLANCTVADFWSPAMAMG+K
Sbjct: 241 ETEGDLKSRGLCLIPVDCSLHLANCTVADFWSPAMAMGKK 250

[Close]
BLAST of CmoCh19G005850 vs. NCBI nr
Match: gi|449438633|ref|XP_004137092.1| (PREDICTED: transcription factor bHLH113 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 2.5e-85
Identity = 186/282 (65.96%), Postives = 204/282 (72.34%), Query Frame = 1 

Query: 1   MAENQS-SGRDPKTAAATTFSQLLFSANHDEDDDIDVDKH-HHVHHQIFEYSVSSS---- 60
           MAENQS +G   +   ATTFSQLLFS +HD+DDD DVD      HHQIF+YSVSSS    
Sbjct: 1   MAENQSFTGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSSSS 60

Query: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120
           FAI+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPE  AIK       +ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPEMAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGG 240
           LHEAMGYIKFLHEQ+QVL SPYL K+QL+S+                       S  G G
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSS----------------------QSATGRG 240

Query: 241 NGDTEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRK 258
           N +TEG+LK RGLCLIPV+CSLHLANCTVADFWSPAMAMG+K
Sbjct: 241 NEETEGDLKSRGLCLIPVDCSLHLANCTVADFWSPAMAMGKK 253

[Close]
BLAST of CmoCh19G005850 vs. NCBI nr
Match: gi|1009150072|ref|XP_015892819.1| (PREDICTED: transcription factor bHLH113 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 129/285 (45.26%), Postives = 161/285 (56.49%), Query Frame = 1 

Query: 1   MAENQSSGRDP-KTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSF-AIE 60
           MAEN    RD     A T FSQLLF+ +      +DV+       Q F ++ SS+F A E
Sbjct: 1   MAENDGFDRDHLAVTAGTNFSQLLFADDDSSVVGLDVN-------QSFNFASSSAFSAAE 60

Query: 61  NPPKMLCFGTKQEQEH------PQLGLRSAHACSDSV-----------------KRKNGS 120
            PPKMLCFG  Q  E        +   +S   CSDS                  K++NGS
Sbjct: 61  KPPKMLCFGNYQYNEDLVFSDTTRTSQKSGVTCSDSSSTSSSNRLSVNTLSKPNKKRNGS 120

Query: 121 NPE----TTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTD 180
           + E    T+A+    +++QK SK+TK E P +   AKRKEKLGERI ALQQLVSPFGKTD
Sbjct: 121 DQESVQSTSAMTTYVMASQKTSKRTKTENPTTTIPAKRKEKLGERIAALQQLVSPFGKTD 180

Query: 181 TASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSL 240
           TASVLHEAMGYIKFL +Q+QVL SPYL   Q +++L +                      
Sbjct: 181 TASVLHEAMGYIKFLQDQVQVLCSPYL---QRLASLPES--------------------- 240

Query: 241 KGGGNGD---TEGELKGRGLCLIPVECSLHLANCTVADFWSPAMA 254
           +GG NGD      EL+ RGLCL+PVEC++H+AN   ADFWSPAM+
Sbjct: 241 EGGENGDGGKARKELRSRGLCLVPVECTVHVANDNGADFWSPAMS 254

[Close]
BLAST of CmoCh19G005850 vs. NCBI nr
Match: gi|1009150070|ref|XP_015892818.1| (PREDICTED: transcription factor bHLH113 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 186.8 bits (473), Expect = 4.7e-44
Identity = 129/286 (45.10%), Postives = 161/286 (56.29%), Query Frame = 1 

Query: 1   MAENQSSGRDP-KTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSF-AIE 60
           MAEN    RD     A T FSQLLF+ +      +DV+       Q F ++ SS+F A E
Sbjct: 1   MAENDGFDRDHLAVTAGTNFSQLLFADDDSSVVGLDVN-------QSFNFASSSAFSAAE 60

Query: 61  NPPKMLCFGTKQEQEH------PQLGLRSAHACSDSV------------------KRKNG 120
            PPKMLCFG  Q  E        +   +S   CSDS                   K++NG
Sbjct: 61  KPPKMLCFGNYQYNEDLVFSDTTRTSQKSGVTCSDSSSTSSSNRLSVNTLSKPNQKKRNG 120

Query: 121 SNPE----TTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKT 180
           S+ E    T+A+    +++QK SK+TK E P +   AKRKEKLGERI ALQQLVSPFGKT
Sbjct: 121 SDQESVQSTSAMTTYVMASQKTSKRTKTENPTTTIPAKRKEKLGERIAALQQLVSPFGKT 180

Query: 181 DTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVS 240
           DTASVLHEAMGYIKFL +Q+QVL SPYL   Q +++L +                     
Sbjct: 181 DTASVLHEAMGYIKFLQDQVQVLCSPYL---QRLASLPES-------------------- 240

Query: 241 LKGGGNGD---TEGELKGRGLCLIPVECSLHLANCTVADFWSPAMA 254
            +GG NGD      EL+ RGLCL+PVEC++H+AN   ADFWSPAM+
Sbjct: 241 -EGGENGDGGKARKELRSRGLCLVPVECTVHVANDNGADFWSPAMS 255

[Close]
BLAST of CmoCh19G005850 vs. NCBI nr
Match: gi|225429299|ref|XP_002269988.1| (PREDICTED: transcription factor bHLH113 isoform X3 [Vitis vinifera])

HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43
Identity = 124/281 (44.13%), Postives = 158/281 (56.23%), Query Frame = 1 

Query: 1   MAENQSSGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MA+++  G D  +  +  FSQLLFS   D+   +D+D+          ++ S SF+ E P
Sbjct: 1   MADSEGFGEDHLSGGS--FSQLLFS---DDVVGLDIDE---------SFAYSPSFSNEKP 60

Query: 61  PKMLCFGTKQEQ----EHPQLGLRSAHACSDSV-----------------KRKNGSN--- 120
           PKMLCFG  Q +    E  +   +S   CSDS                  K++NGS    
Sbjct: 61  PKMLCFGGYQSEVGFAEPTKTPQKSGVTCSDSSSASSTNNTNINKASKSNKKRNGSGNMS 120

Query: 121 -PETTAIKPAPLSNQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTAS 180
            P ++ +  AP   Q+ SKKTK E P S GH K +KEKLGERITALQQLVSPFGKTDTAS
Sbjct: 121 VPTSSGLAKAPAGGQRNSKKTKSENPTSGGHVKVKKEKLGERITALQQLVSPFGKTDTAS 180

Query: 181 VLHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGG 240
           VLHEAMGYI+FL +Q+QVL SPYL       TL      S                 +GG
Sbjct: 181 VLHEAMGYIRFLQDQVQVLCSPYL------QTLPSSAHMS-----------------EGG 240

Query: 241 GNGDTEG--ELKGRGLCLIPVECSLHLANCTVADFWSPAMA 254
            NG+ +   +L+ RGLCL+PVEC+ H+AN   AD+WSPAMA
Sbjct: 241 ENGEEKSSKDLRSRGLCLVPVECTEHVANNNGADYWSPAMA 244

The following BLAST results are available for this feature:
BLAST of CmoCh19G005850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH113_ARATH3.2e-2445.00Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1[more]
BH112_ARATH1.1e-2143.75Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1[more]
BH123_ARATH1.9e-2138.55Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1[more]
BH133_ARATH3.3e-2132.70Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1[more]
BH068_ARATH2.1e-2041.61Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2[more]
BLAST of CmoCh19G005850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7T3_CUCSA1.7e-8565.96Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071650 PE=4 SV=1[more]
F6H6A3_VITVI3.6e-4344.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00210 PE=4 SV=... [more]
V7BAZ7_PHAVU5.3e-4243.11Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1[more]
A0A0S3SM88_PHAAN3.4e-4142.55Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G046400 PE=... [more]
A0A0L9U0G5_PHAAN3.4e-4142.55Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g240100 PE=4 SV=1[more]
BLAST of CmoCh19G005850 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19500.11.8e-2545.00 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G49830.13.7e-2334.84 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G61660.16.4e-2343.75 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G20640.11.1e-2238.55 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G20100.11.9e-2232.70 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmoCh19G005850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110014|ref|XP_008455002.1|1.3e-8666.79PREDICTED: transcription factor bHLH113 [Cucumis melo][more]
gi|449438633|ref|XP_004137092.1|2.5e-8565.96PREDICTED: transcription factor bHLH113 [Cucumis sativus][more]
gi|1009150072|ref|XP_015892819.1|3.6e-4445.26PREDICTED: transcription factor bHLH113 isoform X2 [Ziziphus jujuba][more]
gi|1009150070|ref|XP_015892818.1|4.7e-4445.10PREDICTED: transcription factor bHLH113 isoform X1 [Ziziphus jujuba][more]
gi|225429299|ref|XP_002269988.1|5.2e-4344.13PREDICTED: transcription factor bHLH113 isoform X3 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005850.1CmoCh19G005850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 128..175
score: 3.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 117..166
score: 1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 128..181
score: 8.9
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 215..254
score: 1.3E-50coord: 86..187
score: 1.3
NoneNo IPR availablePANTHERPTHR16223:SF17BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATEDcoord: 215..254
score: 1.3E-50coord: 86..187
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G005850CmaCh19G005710Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G005850Cla016070Watermelon (97103) v1cmowmB496
CmoCh19G005850Csa7G071650Cucumber (Chinese Long) v2cmocuB519
CmoCh19G005850MELO3C018496Melon (DHL92) v3.5.1cmomeB454
CmoCh19G005850ClCG02G006520Watermelon (Charleston Gray)cmowcgB459
CmoCh19G005850CSPI07G07130Wild cucumber (PI 183967)cmocpiB525
CmoCh19G005850Lsi03G005490Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G005850Cp4.1LG15g04460Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G005850MELO3C018496.2Melon (DHL92) v3.6.1cmomedB523
CmoCh19G005850CsaV3_7G008090Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G005850Cla97C02G033490Watermelon (97103) v2cmowmbB512
CmoCh19G005850Bhi05G000990Wax gourdcmowgoB0657
CmoCh19G005850CsGy7G006700Cucumber (Gy14) v2cgybcmoB928
CmoCh19G005850Carg16352Silver-seed gourdcarcmoB0615
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G005850Cucumber (Chinese Long) v3cmocucB0602
CmoCh19G005850Cucumber (Chinese Long) v3cmocucB0611
CmoCh19G005850Watermelon (97103) v2cmowmbB502
CmoCh19G005850Watermelon (97103) v2cmowmbB516
CmoCh19G005850Watermelon (97103) v2cmowmbB519
CmoCh19G005850Wax gourdcmowgoB0640
CmoCh19G005850Wax gourdcmowgoB0670
CmoCh19G005850Cucurbita moschata (Rifu)cmocmoB110
CmoCh19G005850Cucurbita moschata (Rifu)cmocmoB395
CmoCh19G005850Cucumber (Gy14) v1cgycmoB0627
CmoCh19G005850Cucurbita maxima (Rimu)cmacmoB718
CmoCh19G005850Cucurbita maxima (Rimu)cmacmoB143
CmoCh19G005850Cucurbita maxima (Rimu)cmacmoB329
CmoCh19G005850Wild cucumber (PI 183967)cmocpiB510
CmoCh19G005850Cucumber (Chinese Long) v2cmocuB504
CmoCh19G005850Melon (DHL92) v3.5.1cmomeB477
CmoCh19G005850Watermelon (Charleston Gray)cmowcgB464
CmoCh19G005850Watermelon (97103) v1cmowmB490
CmoCh19G005850Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G005850Bottle gourd (USVL1VR-Ls)cmolsiB460
CmoCh19G005850Bottle gourd (USVL1VR-Ls)cmolsiB469
CmoCh19G005850Bottle gourd (USVL1VR-Ls)cmolsiB478
CmoCh19G005850Bottle gourd (USVL1VR-Ls)cmolsiB482
CmoCh19G005850Cucumber (Gy14) v2cgybcmoB352
CmoCh19G005850Cucumber (Gy14) v2cgybcmoB492
CmoCh19G005850Melon (DHL92) v3.6.1cmomedB526
CmoCh19G005850Melon (DHL92) v3.6.1cmomedB549
CmoCh19G005850Melon (DHL92) v3.6.1cmomedB553
CmoCh19G005850Silver-seed gourdcarcmoB0268
CmoCh19G005850Silver-seed gourdcarcmoB0512