CmaCh19G005710 (gene) Cucurbita maxima (Rimu)

NameCmaCh19G005710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
LocationCma_Chr19 : 6420766 .. 6421957 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCACACTTTTAAAAACACCAGAAGCTCGATTTCACCCTGTTTTTATCTGGGGCTCTGTTTTCTTTCCAACACATTAATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCCGCAGATCATGATGAATATGATGAGATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGGCTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCACTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGGTCAGTCAGTTCTTGCCATGTTCTTGTTTTTTCTCTGTTTTTATGAAATGGGTTTTGTTTATTTGGTGATATTAGAGGAAGGAGAAGCTGGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGGTTGCAGAAAAAAAAAAGAGTATCTACTTTCATTTCATTTTTTCCATTTTCAAGGACTTGATATCAATTTTTGAATGTTGATGGCTTCAAAAACAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGTAAGCACTCTGTTTCAAAAAACAGAGGTTTCTTTCTGTTCTTCGTTGATTTTAAACCATTTCTTCGCTTTGTCTCGCTGAAGGGAAGAGGAAATGGGGAAACAGAGGGGGAGATGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGCAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCCATGGCTATGGGGAGGAAGCTCTGAGAAGGAAGGAGGGTTTTGGAGTTTGATGTGTACATAGTTTTGGTGTTTTTTTGAGTTAAATGAATCAGAAACAGAGCAGAAGAAGCTGTAAATCGACAGTTCTTTTTTTTGATGGGAAAGAAATAGATGTGAAAAGATGTTCTTTTTTTTTGTTCTTTTCCTGTTTTTAG

mRNA sequence

CTTCACACTTTTAAAAACACCAGAAGCTCGATTTCACCCTGTTTTTATCTGGGGCTCTGTTTTCTTTCCAACACATTAATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCCGCAGATCATGATGAATATGATGAGATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGGCTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCACTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAGGAAGGAGAAGCTGGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGGAAGAGGAAATGGGGAAACAGAGGGGGAGATGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGCAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCCATGGCTATGGGGAGGAAGCTCTGAGAAGGAAGGAGGGTTTTGGAGTTTGATGTGTACATAGTTTTGGTGTTTTTTTGAGTTAAATGAATCAGAAACAGAGCAGAAGAAGCTGTAAATCGACAGTTCTTTTTTTTGATGGGAAAGAAATAGATGTGAAAAGATGTTCTTTTTTTTTGTTCTTTTCCTGTTTTTAG

Coding sequence (CDS)

ATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCCGCAGATCATGATGAATATGATGAGATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGGCTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCACTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAGGAAGGAGAAGCTGGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGGAAGAGGAAATGGGGAAACAGAGGGGGAGATGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGCAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCCATGGCTATGGGGAGGAAGCTCTGA

Protein sequence

MAENQSSGRDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGRGNGETEGEMKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.1e-27
Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 1

Query: 81  SAHACSDSVKRKNGSNPET-TAIKPAPLSNQKASKKTKP-EAPCSAGHAK-RKEKLGERI 140
           S  AC+     K+ +   T T        N+K  KK K  +   S G AK RKE+LGERI
Sbjct: 105 SNDACTVDKSTKSSTKKRTGTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERI 164

Query: 141 TALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGRG--NGETEGEMK 200
            ALQQLVSP+GKTD ASVLHEAMGYIKFL +QIQVL SPYL  + L  G   G+    MK
Sbjct: 165 AALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMK 224

Query: 201 -----GRGLCLIPVECSLHLANCTVADFWSPA 223
                 RGLCL+PV  ++H+ N   ADFWSPA
Sbjct: 225 AKDLRSRGLCLVPVSSTVHVENSNGADFWSPA 256

BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23
Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1

Query: 109 NQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 168
           N+ A+KK +   P      K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 169 EQIQVLYSPYLDK---NQ-----LGRGNGETEG---EMKGRGLCLIPVECSLHLANCTVA 222
           +Q+ VL +PY+ +   NQ      G+   + E    E++G GLCL+P+  +  +AN T A
Sbjct: 321 DQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTA 380

BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.1e-23
Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1

Query: 75  PQLGLRSAHACSDSVKRKNGS---NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKE 134
           P L     H  S   + KN S   +  +  +K     +Q A+K+ K EA   +   KRKE
Sbjct: 289 PALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKE 348

Query: 135 KLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKN---QLGRGNG 194
           K+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+Q+  L +PY+      Q  + + 
Sbjct: 349 KMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDH 408

Query: 195 ETEGE------MKGRGLCLIPVECSLHLANCTVADFWSP 222
            TE E      ++ RGLCL+PV  +  + + T  DFW+P
Sbjct: 409 STELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 1

Query: 112 ASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQI 171
           A+KK K + P S    K RKEKLG RI +L QLVSPFGKTDTASVL EA+GYI+FLH QI
Sbjct: 203 ANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQI 262

Query: 172 QVLYSPYL------------------------------------------DKNQLGRGNG 223
           + L  PY                                             NQ    N 
Sbjct: 263 EALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNE 322

BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1

Query: 105 APLSNQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI 164
           A  + + ASKK + E+  S    K RKEKLG+RI ALQQLVSPFGKTDTASVL EA+GYI
Sbjct: 309 ATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYI 368

Query: 165 KFLHEQIQVLYSPYL--DKNQLGR----------GNGETEGEMKGRGLCLIPVECSLHL 211
           KFL  QI+ L  PY+   +N+ G+          G+ E   +++ RGLCL+P+ C  ++
Sbjct: 369 KFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTYV 427

BLAST of CmaCh19G005710 vs. TrEMBL
Match: A0A0A0K7T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071650 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85
Identity = 183/260 (70.38%), Postives = 199/260 (76.54%), Query Frame = 1

Query: 1   MAENQS-SGRDPKTAAATTFSQLLFSADHDEYDEIDVDKH-HHVHHQIFEYSVSSS---- 60
           MAENQS +G   +   ATTFSQLLFS  HD+ D+ DVD      HHQIF+YSVSSS    
Sbjct: 1   MAENQSFTGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSSSS 60

Query: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120
           FAI+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPE  AIK       +ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPEMAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQL-------GRGNGETEGEMKGRGLCLIPVECSL 229
           LHEAMGYIKFLHEQ+QVL SPYL K+QL       GRGN ETEG++K RGLCLIPV+CSL
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGRGNEETEGDLKSRGLCLIPVDCSL 240

BLAST of CmaCh19G005710 vs. TrEMBL
Match: V7BAZ7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46
Identity = 121/261 (46.36%), Postives = 147/261 (56.32%), Query Frame = 1

Query: 17  TTFSQLLFSADHDEYDEIDVDKHHHVHHQIF--------------EYSVSSSFAIENPPK 76
           TTFSQLLF  DHD +       HHH HH                   S S  F+   PPK
Sbjct: 18  TTFSQLLFGDDHDHH-------HHHDHHDATALPLPQDHSSYNHNNLSRSPLFSFHKPPK 77

Query: 77  MLCFGTKQEQEH---------PQLGLRSAHACSD----------------SVKRKNGSNP 136
           MLCFG  Q Q H         PQ  + ++   S                 S K++NG   
Sbjct: 78  MLCFGNHQNQPHLSLPPTTVTPQKSVITSSDSSSASSSNYTNTGFNSLPKSTKKRNGLGQ 137

Query: 137 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 196
           E   +    +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLH
Sbjct: 138 EP--VTKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLH 197

Query: 197 EAMGYIKFLHEQIQVLYSPYL------DKNQLGRGNG---ETEGEMKGRGLCLIPVECSL 230
           EAMGYI+FLH+Q+QVL SPYL      D++Q G G     E + E++ RGLCLIPV C++
Sbjct: 198 EAMGYIRFLHDQVQVLCSPYLQTLSSSDQHQHGDGENNEEEVKKELRSRGLCLIPVGCTV 257

BLAST of CmaCh19G005710 vs. TrEMBL
Match: V7BDR6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.5e-45
Identity = 118/264 (44.70%), Postives = 143/264 (54.17%), Query Frame = 1

Query: 17  TTFSQLLFSADHDEYDEIDVDKHHHVHHQIF--------------EYSVSSSFAIENPPK 76
           TTFSQLLF  DHD +       HHH HH                   S S  F+   PPK
Sbjct: 18  TTFSQLLFGDDHDHH-------HHHDHHDATALPLPQDHSSYNHNNLSRSPLFSFHKPPK 77

Query: 77  MLCFGTKQEQ----------------------------EHPQLGLRSAHACSDSVKRKNG 136
           MLCFG  Q Q                             +   G  S    +   K++NG
Sbjct: 78  MLCFGNHQNQPHLSLPPTTVTPQKSVITSSDSSSASSSNYTNTGFNSLPKSTSLQKKRNG 137

Query: 137 SNPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTAS 196
              E   +    +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTAS
Sbjct: 138 LGQEP--VTKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTAS 197

Query: 197 VLHEAMGYIKFLHEQIQVLYSPYL------DKNQLGRGNG---ETEGEMKGRGLCLIPVE 230
           VLHEAMGYI+FLH+Q+QVL SPYL      D++Q G G     E + E++ RGLCLIPV 
Sbjct: 198 VLHEAMGYIRFLHDQVQVLCSPYLQTLSSSDQHQHGDGENNEEEVKKELRSRGLCLIPVG 257

BLAST of CmaCh19G005710 vs. TrEMBL
Match: A0A0S3SM88_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G046400 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44
Identity = 117/254 (46.06%), Postives = 145/254 (57.09%), Query Frame = 1

Query: 9   RDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGT 68
           +D      TTFSQLLF  D D    + +  HHH  +     S S  F+   PPKMLCFG 
Sbjct: 4   KDEFELTGTTFSQLLFGDDLDATPALPLP-HHHCSYDHHTLSASPLFSFHKPPKMLCFGN 63

Query: 69  KQEQEH--------PQLGLRSAHACS---------------DSVKRKNGSNPETTAIKPA 128
            Q Q H         +  + S+ + S                S K++NG   E   +   
Sbjct: 64  HQTQPHIPPTIVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTKKRNGLGQEP--VTKV 123

Query: 129 PLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKF 188
            +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLHEAMGYI+F
Sbjct: 124 GVGGQRLTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRF 183

Query: 189 LHEQIQVLYSPYLDK-----NQLGRGNGETEGE-----MKGRGLCLIPVECSLHLANCTV 230
           LH+Q+QVL SPYL       +Q   G+GE   E     ++ RGLCLIPV C++H+A+   
Sbjct: 184 LHDQVQVLCSPYLQSLSSSHHQHQHGDGENNEEEVKKDLRSRGLCLIPVGCTVHVASSNG 243

BLAST of CmaCh19G005710 vs. TrEMBL
Match: A0A0L9U0G5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g240100 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44
Identity = 117/254 (46.06%), Postives = 145/254 (57.09%), Query Frame = 1

Query: 9   RDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGT 68
           +D      TTFSQLLF  D D    + +  HHH  +     S S  F+   PPKMLCFG 
Sbjct: 4   KDEFELTGTTFSQLLFGDDLDATPALPLP-HHHCSYDHHTLSASPLFSFHKPPKMLCFGN 63

Query: 69  KQEQEH--------PQLGLRSAHACS---------------DSVKRKNGSNPETTAIKPA 128
            Q Q H         +  + S+ + S                S K++NG   E   +   
Sbjct: 64  HQTQPHIPPTIVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTKKRNGLGQEP--VTKV 123

Query: 129 PLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKF 188
            +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLHEAMGYI+F
Sbjct: 124 GVGGQRLTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRF 183

Query: 189 LHEQIQVLYSPYLDK-----NQLGRGNGETEGE-----MKGRGLCLIPVECSLHLANCTV 230
           LH+Q+QVL SPYL       +Q   G+GE   E     ++ RGLCLIPV C++H+A+   
Sbjct: 184 LHDQVQVLCSPYLQSLSSSHHQHQHGDGENNEEEVKKDLRSRGLCLIPVGCTVHVASSNG 243

BLAST of CmaCh19G005710 vs. TAIR10
Match: AT3G19500.1 (AT3G19500.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 1

Query: 81  SAHACSDSVKRKNGSNPET-TAIKPAPLSNQKASKKTKP-EAPCSAGHAK-RKEKLGERI 140
           S  AC+     K+ +   T T        N+K  KK K  +   S G AK RKE+LGERI
Sbjct: 105 SNDACTVDKSTKSSTKKRTGTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERI 164

Query: 141 TALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGRG--NGETEGEMK 200
            ALQQLVSP+GKTD ASVLHEAMGYIKFL +QIQVL SPYL  + L  G   G+    MK
Sbjct: 165 AALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMK 224

Query: 201 -----GRGLCLIPVECSLHLANCTVADFWSPA 223
                 RGLCL+PV  ++H+ N   ADFWSPA
Sbjct: 225 AKDLRSRGLCLVPVSSTVHVENSNGADFWSPA 256

BLAST of CmaCh19G005710 vs. TAIR10
Match: AT1G49830.1 (AT1G49830.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-26
Identity = 76/198 (38.38%), Postives = 110/198 (55.56%), Query Frame = 1

Query: 45  QIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNG---------- 104
           ++ E S    F   + P+MLCFG   + +   L  + + + +  +  +N           
Sbjct: 29  EVEEDSFGFRFTGNDAPQMLCFGGGNQNDTDLLFSQPSFSPASPLSSRNNACVVNDQSFR 88

Query: 105 SNPET-TAIKPAPLSNQKASKKTK-PEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTD 164
           SN +T +A     + + K  K+ K  +   S G+AK +KEK+GE+IT LQ LVSP+GKTD
Sbjct: 89  SNKKTGSADGHDRVCDPKPGKRCKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTD 148

Query: 165 TASVLHEAMGYIKFLHEQIQVLYSPYLDKNQL-GRGNGETE-----GEMKGRGLCLIPVE 224
            ASVLHE MGYIKFL +Q+QVL +PY   N L     GE        E++  GLCL+P+ 
Sbjct: 149 AASVLHETMGYIKFLQDQVQVLSTPYFKHNPLDDEDTGEVNPTMKVKELRSNGLCLVPLA 208

BLAST of CmaCh19G005710 vs. TAIR10
Match: AT1G61660.1 (AT1G61660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1

Query: 109 NQKASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 168
           N+ A+KK +   P      K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 169 EQIQVLYSPYLDK---NQ-----LGRGNGETEG---EMKGRGLCLIPVECSLHLANCTVA 222
           +Q+ VL +PY+ +   NQ      G+   + E    E++G GLCL+P+  +  +AN T A
Sbjct: 321 DQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTA 380

BLAST of CmaCh19G005710 vs. TAIR10
Match: AT3G20640.1 (AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24
Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1

Query: 75  PQLGLRSAHACSDSVKRKNGS---NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKE 134
           P L     H  S   + KN S   +  +  +K     +Q A+K+ K EA   +   KRKE
Sbjct: 289 PALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKE 348

Query: 135 KLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKN---QLGRGNG 194
           K+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+Q+  L +PY+      Q  + + 
Sbjct: 349 KMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDH 408

Query: 195 ETEGE------MKGRGLCLIPVECSLHLANCTVADFWSP 222
            TE E      ++ RGLCL+PV  +  + + T  DFW+P
Sbjct: 409 STELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

BLAST of CmaCh19G005710 vs. TAIR10
Match: AT2G20100.1 (AT2G20100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 6.3e-22
Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 1

Query: 112 ASKKTKPEAPCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQI 171
           A+KK K + P S    K RKEKLG RI +L QLVSPFGKTDTASVL EA+GYI+FLH QI
Sbjct: 203 ANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQI 262

Query: 172 QVLYSPYL------------------------------------------DKNQLGRGNG 223
           + L  PY                                             NQ    N 
Sbjct: 263 EALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNE 322

BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|659110014|ref|XP_008455002.1| (PREDICTED: transcription factor bHLH113 [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 2.0e-86
Identity = 183/258 (70.93%), Postives = 201/258 (77.91%), Query Frame = 1

Query: 1   MAENQS-SGRDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSS---FA 60
           MAENQS +G   +   ATTFSQLLFS  HD+ D+ DVD   + HHQIF+YSVSSS   FA
Sbjct: 1   MAENQSFAGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDKN-HHQIFDYSVSSSSSSFA 60

Query: 61  IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 120
           I+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGSNP
Sbjct: 61  IDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSNP 120

Query: 121 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           ET AIK       +ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 121 ETAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180

Query: 181 EAMGYIKFLHEQIQVLYSPYLDKNQL-------GRGNGETEGEMKGRGLCLIPVECSLHL 229
           EAMGYIKFLHEQ+QVL SPYL K+QL       G+ NGETEG++K RGLCLIPV+CSLHL
Sbjct: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHL 240

BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|449438633|ref|XP_004137092.1| (PREDICTED: transcription factor bHLH113 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 1.7e-85
Identity = 183/260 (70.38%), Postives = 199/260 (76.54%), Query Frame = 1

Query: 1   MAENQS-SGRDPKTAAATTFSQLLFSADHDEYDEIDVDKH-HHVHHQIFEYSVSSS---- 60
           MAENQS +G   +   ATTFSQLLFS  HD+ D+ DVD      HHQIF+YSVSSS    
Sbjct: 1   MAENQSFTGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSSSS 60

Query: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120
           FAI+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPE  AIK       +ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPEMAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQL-------GRGNGETEGEMKGRGLCLIPVECSL 229
           LHEAMGYIKFLHEQ+QVL SPYL K+QL       GRGN ETEG++K RGLCLIPV+CSL
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGRGNEETEGDLKSRGLCLIPVDCSL 240

BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|593636126|ref|XP_007143068.1| (hypothetical protein PHAVU_007G041200g [Phaseolus vulgaris])

HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46
Identity = 121/261 (46.36%), Postives = 147/261 (56.32%), Query Frame = 1

Query: 17  TTFSQLLFSADHDEYDEIDVDKHHHVHHQIF--------------EYSVSSSFAIENPPK 76
           TTFSQLLF  DHD +       HHH HH                   S S  F+   PPK
Sbjct: 18  TTFSQLLFGDDHDHH-------HHHDHHDATALPLPQDHSSYNHNNLSRSPLFSFHKPPK 77

Query: 77  MLCFGTKQEQEH---------PQLGLRSAHACSD----------------SVKRKNGSNP 136
           MLCFG  Q Q H         PQ  + ++   S                 S K++NG   
Sbjct: 78  MLCFGNHQNQPHLSLPPTTVTPQKSVITSSDSSSASSSNYTNTGFNSLPKSTKKRNGLGQ 137

Query: 137 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 196
           E   +    +  Q+ +KKTK E P S GHAKRKEKLGERI ALQQLVSPFGKTDTASVLH
Sbjct: 138 EP--VTKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLH 197

Query: 197 EAMGYIKFLHEQIQVLYSPYL------DKNQLGRGNG---ETEGEMKGRGLCLIPVECSL 230
           EAMGYI+FLH+Q+QVL SPYL      D++Q G G     E + E++ RGLCLIPV C++
Sbjct: 198 EAMGYIRFLHDQVQVLCSPYLQTLSSSDQHQHGDGENNEEEVKKELRSRGLCLIPVGCTV 257

BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|1009150072|ref|XP_015892819.1| (PREDICTED: transcription factor bHLH113 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46
Identity = 125/262 (47.71%), Postives = 155/262 (59.16%), Query Frame = 1

Query: 1   MAENQSSGRDP-KTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSF-AIE 60
           MAEN    RD     A T FSQLLF+ D      +DV+       Q F ++ SS+F A E
Sbjct: 1   MAENDGFDRDHLAVTAGTNFSQLLFADDDSSVVGLDVN-------QSFNFASSSAFSAAE 60

Query: 61  NPPKMLCFGTKQEQEH------PQLGLRSAHACSDSV-----------------KRKNGS 120
            PPKMLCFG  Q  E        +   +S   CSDS                  K++NGS
Sbjct: 61  KPPKMLCFGNYQYNEDLVFSDTTRTSQKSGVTCSDSSSTSSSNRLSVNTLSKPNKKRNGS 120

Query: 121 NPE----TTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTD 180
           + E    T+A+    +++QK SK+TK E P +   AKRKEKLGERI ALQQLVSPFGKTD
Sbjct: 121 DQESVQSTSAMTTYVMASQKTSKRTKTENPTTTIPAKRKEKLGERIAALQQLVSPFGKTD 180

Query: 181 TASVLHEAMGYIKFLHEQIQVLYSPYLDK---------NQLGRGNGETEGEMKGRGLCLI 225
           TASVLHEAMGYIKFL +Q+QVL SPYL +          + G G G+   E++ RGLCL+
Sbjct: 181 TASVLHEAMGYIKFLQDQVQVLCSPYLQRLASLPESEGGENGDG-GKARKELRSRGLCLV 240

BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|1009150070|ref|XP_015892818.1| (PREDICTED: transcription factor bHLH113 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 125/263 (47.53%), Postives = 155/263 (58.94%), Query Frame = 1

Query: 1   MAENQSSGRDP-KTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSF-AIE 60
           MAEN    RD     A T FSQLLF+ D      +DV+       Q F ++ SS+F A E
Sbjct: 1   MAENDGFDRDHLAVTAGTNFSQLLFADDDSSVVGLDVN-------QSFNFASSSAFSAAE 60

Query: 61  NPPKMLCFGTKQEQEH------PQLGLRSAHACSDSV------------------KRKNG 120
            PPKMLCFG  Q  E        +   +S   CSDS                   K++NG
Sbjct: 61  KPPKMLCFGNYQYNEDLVFSDTTRTSQKSGVTCSDSSSTSSSNRLSVNTLSKPNQKKRNG 120

Query: 121 SNPE----TTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKT 180
           S+ E    T+A+    +++QK SK+TK E P +   AKRKEKLGERI ALQQLVSPFGKT
Sbjct: 121 SDQESVQSTSAMTTYVMASQKTSKRTKTENPTTTIPAKRKEKLGERIAALQQLVSPFGKT 180

Query: 181 DTASVLHEAMGYIKFLHEQIQVLYSPYLDK---------NQLGRGNGETEGEMKGRGLCL 225
           DTASVLHEAMGYIKFL +Q+QVL SPYL +          + G G G+   E++ RGLCL
Sbjct: 181 DTASVLHEAMGYIKFLQDQVQVLCSPYLQRLASLPESEGGENGDG-GKARKELRSRGLCL 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH113_ARATH2.1e-2751.97Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1[more]
BH112_ARATH5.3e-2348.80Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1[more]
BH123_ARATH9.1e-2342.14Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1[more]
BH133_ARATH1.1e-2039.61Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1[more]
BH110_ARATH5.5e-2048.74Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0K7T3_CUCSA1.2e-8570.38Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071650 PE=4 SV=1[more]
V7BAZ7_PHAVU2.4e-4646.36Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1[more]
V7BDR6_PHAVU4.5e-4544.70Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1[more]
A0A0S3SM88_PHAAN1.0e-4446.06Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G046400 PE=... [more]
A0A0L9U0G5_PHAAN1.0e-4446.06Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g240100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G19500.11.2e-2851.97 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G49830.13.2e-2638.38 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G61660.13.0e-2448.80 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G20640.15.1e-2442.14 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G20100.16.3e-2239.61 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659110014|ref|XP_008455002.1|2.0e-8670.93PREDICTED: transcription factor bHLH113 [Cucumis melo][more]
gi|449438633|ref|XP_004137092.1|1.7e-8570.38PREDICTED: transcription factor bHLH113 [Cucumis sativus][more]
gi|593636126|ref|XP_007143068.1|3.4e-4646.36hypothetical protein PHAVU_007G041200g [Phaseolus vulgaris][more]
gi|1009150072|ref|XP_015892819.1|3.4e-4647.71PREDICTED: transcription factor bHLH113 isoform X2 [Ziziphus jujuba][more]
gi|1009150070|ref|XP_015892818.1|4.5e-4647.53PREDICTED: transcription factor bHLH113 isoform X1 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G005710.1CmaCh19G005710.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 128..173
score: 3.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 117..166
score: 1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 128..178
score: 1.14
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 86..225
score: 4.3
NoneNo IPR availablePANTHERPTHR16223:SF17BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATEDcoord: 86..225
score: 4.3

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G005710Cucurbita maxima (Rimu)cmacmaB149
CmaCh19G005710Cucurbita maxima (Rimu)cmacmaB340
CmaCh19G005710Cucurbita maxima (Rimu)cmacmaB415
CmaCh19G005710Cucurbita maxima (Rimu)cmacmaB457
CmaCh19G005710Cucurbita maxima (Rimu)cmacmaB458
CmaCh19G005710Cucumber (Gy14) v1cgycmaB0624
CmaCh19G005710Cucurbita moschata (Rifu)cmacmoB494
CmaCh19G005710Cucurbita moschata (Rifu)cmacmoB502
CmaCh19G005710Cucurbita moschata (Rifu)cmacmoB530
CmaCh19G005710Wild cucumber (PI 183967)cmacpiB520
CmaCh19G005710Cucumber (Chinese Long) v2cmacuB513
CmaCh19G005710Melon (DHL92) v3.5.1cmameB485
CmaCh19G005710Watermelon (Charleston Gray)cmawcgB457
CmaCh19G005710Watermelon (Charleston Gray)cmawcgB465
CmaCh19G005710Watermelon (97103) v1cmawmB496
CmaCh19G005710Watermelon (97103) v1cmawmB497
CmaCh19G005710Cucurbita pepo (Zucchini)cmacpeB539
CmaCh19G005710Bottle gourd (USVL1VR-Ls)cmalsiB475
CmaCh19G005710Bottle gourd (USVL1VR-Ls)cmalsiB485
CmaCh19G005710Bottle gourd (USVL1VR-Ls)cmalsiB493
CmaCh19G005710Bottle gourd (USVL1VR-Ls)cmalsiB498
CmaCh19G005710Cucumber (Gy14) v2cgybcmaB210
CmaCh19G005710Cucumber (Gy14) v2cgybcmaB379
CmaCh19G005710Cucumber (Gy14) v2cgybcmaB521
CmaCh19G005710Melon (DHL92) v3.6.1cmamedB540
CmaCh19G005710Melon (DHL92) v3.6.1cmamedB561
CmaCh19G005710Melon (DHL92) v3.6.1cmamedB565
CmaCh19G005710Silver-seed gourdcarcmaB0253
CmaCh19G005710Silver-seed gourdcarcmaB0261
CmaCh19G005710Silver-seed gourdcarcmaB0407
CmaCh19G005710Silver-seed gourdcarcmaB0528
CmaCh19G005710Cucumber (Chinese Long) v3cmacucB0635
CmaCh19G005710Cucumber (Chinese Long) v3cmacucB0607
CmaCh19G005710Cucumber (Chinese Long) v3cmacucB0618
CmaCh19G005710Cucumber (Chinese Long) v3cmacucB0627
CmaCh19G005710Watermelon (97103) v2cmawmbB521
CmaCh19G005710Watermelon (97103) v2cmawmbB535
CmaCh19G005710Watermelon (97103) v2cmawmbB536
CmaCh19G005710Watermelon (97103) v2cmawmbB546
CmaCh19G005710Wax gourdcmawgoB0640
CmaCh19G005710Wax gourdcmawgoB0642
CmaCh19G005710Wax gourdcmawgoB0664
CmaCh19G005710Wax gourdcmawgoB0672