CmaCh19G005710 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCACACTTTTAAAAACACCAGAAGCTCGATTTCACCCTGTTTTTATCTGGGGCTCTGTTTTCTTTCCAACACATTAATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCCGCAGATCATGATGAATATGATGAGATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGGCTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCACTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGGTCAGTCAGTTCTTGCCATGTTCTTGTTTTTTCTCTGTTTTTATGAAATGGGTTTTGTTTATTTGGTGATATTAGAGGAAGGAGAAGCTGGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGGTTGCAGAAAAAAAAAAGAGTATCTACTTTCATTTCATTTTTTCCATTTTCAAGGACTTGATATCAATTTTTGAATGTTGATGGCTTCAAAAACAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGTAAGCACTCTGTTTCAAAAAACAGAGGTTTCTTTCTGTTCTTCGTTGATTTTAAACCATTTCTTCGCTTTGTCTCGCTGAAGGGAAGAGGAAATGGGGAAACAGAGGGGGAGATGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGCAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCCATGGCTATGGGGAGGAAGCTCTGAGAAGGAAGGAGGGTTTTGGAGTTTGATGTGTACATAGTTTTGGTGTTTTTTTGAGTTAAATGAATCAGAAACAGAGCAGAAGAAGCTGTAAATCGACAGTTCTTTTTTTTGATGGGAAAGAAATAGATGTGAAAAGATGTTCTTTTTTTTTGTTCTTTTCCTGTTTTTAG CTTCACACTTTTAAAAACACCAGAAGCTCGATTTCACCCTGTTTTTATCTGGGGCTCTGTTTTCTTTCCAACACATTAATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCCGCAGATCATGATGAATATGATGAGATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGGCTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCACTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAGGAAGGAGAAGCTGGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGGAAGAGGAAATGGGGAAACAGAGGGGGAGATGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGCAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCCATGGCTATGGGGAGGAAGCTCTGAGAAGGAAGGAGGGTTTTGGAGTTTGATGTGTACATAGTTTTGGTGTTTTTTTGAGTTAAATGAATCAGAAACAGAGCAGAAGAAGCTGTAAATCGACAGTTCTTTTTTTTGATGGGAAAGAAATAGATGTGAAAAGATGTTCTTTTTTTTTGTTCTTTTCCTGTTTTTAG ATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTCCGCAGATCATGATGAATATGATGAGATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGGCTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGATCAAACCCAGAAACAACCGCCATTAAACCAGCTCCACTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAGGAAGGAGAAGCTGGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGGAAGAGGAAATGGGGAAACAGAGGGGGAGATGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGCAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCCATGGCTATGGGGAGGAAGCTCTGA MAENQSSGRDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGRGNGETEGEMKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.1e-27 Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1
BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.1e-23 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1
BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20 Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 1
BLAST of CmaCh19G005710 vs. Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20 Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TrEMBL
Match: A0A0A0K7T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071650 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85 Identity = 183/260 (70.38%), Postives = 199/260 (76.54%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TrEMBL
Match: V7BAZ7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46 Identity = 121/261 (46.36%), Postives = 147/261 (56.32%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TrEMBL
Match: V7BDR6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G041200g PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.5e-45 Identity = 118/264 (44.70%), Postives = 143/264 (54.17%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TrEMBL
Match: A0A0S3SM88_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G046400 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44 Identity = 117/254 (46.06%), Postives = 145/254 (57.09%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TrEMBL
Match: A0A0L9U0G5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g240100 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44 Identity = 117/254 (46.06%), Postives = 145/254 (57.09%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TAIR10
Match: AT3G19500.1 (AT3G19500.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28 Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TAIR10
Match: AT1G49830.1 (AT1G49830.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-26 Identity = 76/198 (38.38%), Postives = 110/198 (55.56%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TAIR10
Match: AT1G61660.1 (AT1G61660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TAIR10
Match: AT3G20640.1 (AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1
BLAST of CmaCh19G005710 vs. TAIR10
Match: AT2G20100.1 (AT2G20100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 101.7 bits (252), Expect = 6.3e-22 Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 1
BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|659110014|ref|XP_008455002.1| (PREDICTED: transcription factor bHLH113 [Cucumis melo]) HSP 1 Score: 327.4 bits (838), Expect = 2.0e-86 Identity = 183/258 (70.93%), Postives = 201/258 (77.91%), Query Frame = 1
BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|449438633|ref|XP_004137092.1| (PREDICTED: transcription factor bHLH113 [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 1.7e-85 Identity = 183/260 (70.38%), Postives = 199/260 (76.54%), Query Frame = 1
BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|593636126|ref|XP_007143068.1| (hypothetical protein PHAVU_007G041200g [Phaseolus vulgaris]) HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46 Identity = 121/261 (46.36%), Postives = 147/261 (56.32%), Query Frame = 1
BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|1009150072|ref|XP_015892819.1| (PREDICTED: transcription factor bHLH113 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46 Identity = 125/262 (47.71%), Postives = 155/262 (59.16%), Query Frame = 1
BLAST of CmaCh19G005710 vs. NCBI nr
Match: gi|1009150070|ref|XP_015892818.1| (PREDICTED: transcription factor bHLH113 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46 Identity = 125/263 (47.53%), Postives = 155/263 (58.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |