CmoCh18G000420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G000420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RING/U-box superfamily protein
Location	Cmo_Chr18 : 256295 .. 259643 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAGTACAGAGAAGCATGAGAATAGAACCAGAAAAAAAAGGTAAAATCGCTTCAAAATCAATCCATTTTTCTCTTTTCTTCCCCTTCCTCTCTCTCCGCCTCTGCATTCAAATCTGGGAATGGAACAGAGAGATTGAATAAATTAAAGTTTATTAACGTTGATGCTTTTCTCTCATTCAACTCAAATTCTGTCCCCTTCAATTCCATTCCCTTTACTTTTCTCTTCTAAAACCCTTTAATCGCTTCTATTTGTTTGTTCTTTCTTCTTCTTCCTCCTCTACTTTCTTTGTTGCATTCTCATCCTTGTCTTAGAATCATGCCTGTTGTTACACGAGCTTCTACAATGGATGAACACATCAAATTGAGAAGACCCAGAAGCCATTTGAGGCAACCCATTTCAGAATCAGATCCAAACCCATCAATCCCTTCCATTGTTCAATCCACTCGCTGCAAATCCACCATTTCTTCTCTTCTCCTCTCCACCTTTACCAATAATGCCACTAATGGCACCAATGAATCTTTGCCCTCTTCCGTTCCCACGAACAGGAAGAAGACCCACTTCTCTTCTGCAACTTTCAGGGGACTTGGATGCACTTCCGCCGCTTCTCAGCAGGTTACGGTTCCGGCTGTAATTCGGACTTCAGCGGATTGGCAGAAGAAGAATACAAGGAAAAAGAAGCAGAAGAACTCCAAGAACAAAACCCATCAAGGAATTGTTGATGGGTCTCATTTTCAACATAATTCCCCTTTTAATTCTGCTAGCTGTTTAGACGCTCAAGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTGCCGATGCTGCTGCTTCTGTAGATTGCGTTGTTGCTAGAAGACATGCTTCTGGGAGGGGCAAAATCGATTTGGAGAAGATGACTCAAAGGGAGGTACTCGCTTTTCCATTTCTTTATAATTTATTTTCAGCTTCTTTCATCTGTGTTTCTTTTCTGCTATAGGGTTCTTCTAAATCTGTCTGAATCTGCTTGGAACTTGTTTGTTTTCATTCTTCTTTGTAAATTCGAGTAGTTAATGCAAATGGGTCTTCGAGTAATCTTCCTTTCACGATATGAAAATGTGTCATCTCTTGTTCATAGATTGTTATCTATCACAGCACATTGCTTCATGCGTTTTAACTCGCTCTGGTTTTACAATGGCAGCGTTCTTATTTAGGAAGACGAACAGTGAACCCCGAGACTCTCTTACTTTTGGAGTCTGATTCTGATCTTCCAACAGCTCGATCACTGGAAGTTTCTCGGAGTCGATATTATCGCCATGTTCGACATCCATCCCCTGATGGGCTTGCTGAGGTAAGCGTTCATATTTGTATTCAATTTCATGAATATCTTACTCGAACCGGATCTGTTTTATAGGTTGTACAATTGTGTCTTTAACCGCCTAAGTCCACTGCTAGCAGATATTGTCCGTTTTGGTCCTATACGTAGTGCTGTTAGCCTCACGATTTTAAAACATGTCTATTAGGGAAAAGTTTCTATGCTCTTATAAGGAGTGATTCGTTTCCTTCTCCAATTGATGTAGGATTTCACAATTCACACCACCCAGTGTCTGGCTCTGATACCATTTGTAACTGTCCAATCCCACCGCTAGCCGATATTATCTGCTTTGGCCCATTATATATTGCCATCCGCCTCACGGTTTCAAAACGTGTCTACTAGGGAGAGGTTTTCACAAATTTTGAGATCCCGCATCGATTGGAGAGGAGAACGACATATTCCTTGTAAGGGGGTGGAAACCTCTCCCAAACAGATGTGTTTTAAAACCGTGAGGCTGATGGCGATACGTAACGGGTCAAATCGGACAATATCTACAAGTGGTGGATTTGGATTGTTACAGTGTCCGAGTTCTAAAGATATAAGCTTCAATTGGGTTCTGGCTTATGTTTTGTTTTTCAGTTCTTGATGGCCTGAAATAGTTTGGCATATGTCATTTGATGTCTTGGAAGATTCTGATATTTGGTGAATTAGAGTATTGTGCATTTTTAGATGTTTGGCAGATGGCATTAGAAAATGCAGCTTCAAAGAAGCAAAGCAAACTTGCTTTCAAGTTTTAACCTGTTTTGTTGGAACATGTTTTTGATTTGGAGTGTTTGGTTTTCTTGACAGAGTTGTTCCTTAATTCTGAGCTGGAAATGTTTTCAGATTATGATGTTCTTTCTATGTACTAACGATCATATGAGACTGATTTGCTCACTTGATATGTTATTTAGCAGATTATGATGTTCCAGAGCAGTTTGCTGATGGGTGGAAGGTTCGATATACGTGATCAATTTAGGGAATTACGACTCGACGTTGATGACATGTCGTATGAGGTTCATAACTTTCTCCAAATCCTTCTTCCTAGACTGATACTCTCTACTCACAAATATTTCTTATAACGGGATGGAAACAGGAACTGCTCGAACTCGGTGAAAGGATAGGCCATGTGAGTACCGGGCTGAAAGAAGACGAGATTGGAAGATGCATTCGGAAAACAAAGCCCCTTGTTGTAAATGAGCTATCATCTTATTTACTATCTCAAATGGATCGAAAGTGCAGCATCTGTCAGGTGAAGTAGCAGAGTTTAGTTTGCTAGCTCTGATTAGCACTTTCTTGACACCTAAAATGATTTTGTACTAGCAGGAGGACTATGAACCAGACGATGAAATGGGTAGGCTGGGATGCGGGCACAGCTATCACATACACTGTATAAAGCAGTGGCTCGCACAGAAGAATACATGCCCAGTCTGTAAGACCGCAGCGGTAGGCCGAGGCTGAACGGTTAGTCCATCACGTCTAGCGTTTCTTCGACTCTGCTTGCTTGCTTTCTCCCCTATGTGGTGTACAGATTTCATTGCCTTTTTACATCACCAAAAGCATTCTTTCATTTGTGTGAAACTTCCTTTCTTGATTGCATAGCTGTAAGACATCAAATTACAATGGCTTCCTTGTTGTAATCTGTTTTCATTATGGCATAGCTCTGCCTCTGATGATTGAGTTCATGATTCGAATCAAATGATCATTTTATGATAGCTTCATTCTTATATGAATCGAGTCGGGTCGGAGTGAATAAAACTAAAAAAGCGACAAAACTCTGTTTCACTGAAGAAATATTTCCAGATATCAAATAACACAACCTAGAACTTCTGAATCCAGTAATCTACTTCAGAAACTATCCCCCACAGGGTTGTATGTCTGTCAATTGTGTATACAGTGGAACTTAGGAAGGAAATCTGTGTATATTCTATCGCGGAAGCTATACGTATTCTACTGTTCCTGATATCTACCGACGAATGTATATACCTAGCGGAGTTGAATAGTAGAATAGTATGGTGA

mRNA sequence

AAAACAGTACAGAGAAGCATGAGAATAGAACCAGAAAAAAAAGGTAAAATCGCTTCAAAATCAATCCATTTTTCTCTTTTCTTCCCCTTCCTCTCTCTCCGCCTCTGCATTCAAATCTGGGAATGGAACAGAGAGATTGAATAAATTAAAGTTTATTAACGTTGATGCTTTTCTCTCATTCAACTCAAATTCTGTCCCCTTCAATTCCATTCCCTTTACTTTTCTCTTCTAAAACCCTTTAATCGCTTCTATTTGTTTGTTCTTTCTTCTTCTTCCTCCTCTACTTTCTTTGTTGCATTCTCATCCTTGTCTTAGAATCATGCCTGTTGTTACACGAGCTTCTACAATGGATGAACACATCAAATTGAGAAGACCCAGAAGCCATTTGAGGCAACCCATTTCAGAATCAGATCCAAACCCATCAATCCCTTCCATTGTTCAATCCACTCGCTGCAAATCCACCATTTCTTCTCTTCTCCTCTCCACCTTTACCAATAATGCCACTAATGGCACCAATGAATCTTTGCCCTCTTCCGTTCCCACGAACAGGAAGAAGACCCACTTCTCTTCTGCAACTTTCAGGGGACTTGGATGCACTTCCGCCGCTTCTCAGCAGGTTACGGTTCCGGCTGTAATTCGGACTTCAGCGGATTGGCAGAAGAAGAATACAAGGAAAAAGAAGCAGAAGAACTCCAAGAACAAAACCCATCAAGGAATTGTTGATGGGTCTCATTTTCAACATAATTCCCCTTTTAATTCTGCTAGCTGTTTAGACGCTCAAGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTGCCGATGCTGCTGCTTCTGTAGATTGCGTTGTTGCTAGAAGACATGCTTCTGGGAGGGGCAAAATCGATTTGGAGAAGATGACTCAAAGGGAGCGTTCTTATTTAGGAAGACGAACAGTGAACCCCGAGACTCTCTTACTTTTGGAGTCTGATTCTGATCTTCCAACAGCTCGATCACTGGAAGTTTCTCGGAGTCGATATTATCGCCATGTTCGACATCCATCCCCTGATGGGCTTGCTGAGCAGATTATGATGTTCCAGAGCAGTTTGCTGATGGGTGGAAGGTTCGATATACGTGATCAATTTAGGGAATTACGACTCGACGTTGATGACATGTCGTATGAGGAACTGCTCGAACTCGGTGAAAGGATAGGCCATGTGAGTACCGGGCTGAAAGAAGACGAGATTGGAAGATGCATTCGGAAAACAAAGCCCCTTGTTGTAAATGAGCTATCATCTTATTTACTATCTCAAATGGATCGAAAGTGCAGCATCTGTCAGGAGGACTATGAACCAGACGATGAAATGGGTAGGCTGGGATGCGGGCACAGCTATCACATACACTGTATAAAGCAGTGGCTCGCACAGAAGAATACATGCCCAGTCTTGGAACTTAGGAAGGAAATCTGTGTATATTCTATCGCGGAAGCTATACGTATTCTACTGTTCCTGATATCTACCGACGAATGTATATACCTAGCGGAGTTGAATAGTAGAATAGTATGGTGA

Coding sequence (CDS)

ATGCCTGTTGTTACACGAGCTTCTACAATGGATGAACACATCAAATTGAGAAGACCCAGAAGCCATTTGAGGCAACCCATTTCAGAATCAGATCCAAACCCATCAATCCCTTCCATTGTTCAATCCACTCGCTGCAAATCCACCATTTCTTCTCTTCTCCTCTCCACCTTTACCAATAATGCCACTAATGGCACCAATGAATCTTTGCCCTCTTCCGTTCCCACGAACAGGAAGAAGACCCACTTCTCTTCTGCAACTTTCAGGGGACTTGGATGCACTTCCGCCGCTTCTCAGCAGGTTACGGTTCCGGCTGTAATTCGGACTTCAGCGGATTGGCAGAAGAAGAATACAAGGAAAAAGAAGCAGAAGAACTCCAAGAACAAAACCCATCAAGGAATTGTTGATGGGTCTCATTTTCAACATAATTCCCCTTTTAATTCTGCTAGCTGTTTAGACGCTCAAGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTGCCGATGCTGCTGCTTCTGTAGATTGCGTTGTTGCTAGAAGACATGCTTCTGGGAGGGGCAAAATCGATTTGGAGAAGATGACTCAAAGGGAGCGTTCTTATTTAGGAAGACGAACAGTGAACCCCGAGACTCTCTTACTTTTGGAGTCTGATTCTGATCTTCCAACAGCTCGATCACTGGAAGTTTCTCGGAGTCGATATTATCGCCATGTTCGACATCCATCCCCTGATGGGCTTGCTGAGCAGATTATGATGTTCCAGAGCAGTTTGCTGATGGGTGGAAGGTTCGATATACGTGATCAATTTAGGGAATTACGACTCGACGTTGATGACATGTCGTATGAGGAACTGCTCGAACTCGGTGAAAGGATAGGCCATGTGAGTACCGGGCTGAAAGAAGACGAGATTGGAAGATGCATTCGGAAAACAAAGCCCCTTGTTGTAAATGAGCTATCATCTTATTTACTATCTCAAATGGATCGAAAGTGCAGCATCTGTCAGGAGGACTATGAACCAGACGATGAAATGGGTAGGCTGGGATGCGGGCACAGCTATCACATACACTGTATAAAGCAGTGGCTCGCACAGAAGAATACATGCCCAGTCTTGGAACTTAGGAAGGAAATCTGTGTATATTCTATCGCGGAAGCTATACGTATTCTACTGTTCCTGATATCTACCGACGAATGTATATACCTAGCGGAGTTGAATAGTAGAATAGTATGGTGA

Homology

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BLAST of CmoCh18G000420 vs. Swiss-Prot
Match: HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP1 PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 9.2e-26
Identity = 57/116 (49.14%), Postives = 80/116 (68.97%), Query Frame = 1


Query: 254 SLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGLKEDEIGRCIRKTKPLVV 313
           S+  GG  DI D+ R++RLD+D+MSYEELL L ERIG+VSTGL E+E+ + +++ K    
Sbjct: 551 SIFYGG-VDIHDRHRDMRLDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRK---- 610

Query: 314 NELSSYLL--SQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIKQWLAQKNTCPV 368
              SS+ L  S  +  C ICQE+Y   D++G L CGH +H+ C++QWL  KNTCP+
Sbjct: 611 --FSSWRLEASVEEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPI 659

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BLAST of CmoCh18G000420 vs. Swiss-Prot
Match: MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.2e-26
Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = 1


Query: 223 RSLEVSRSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEEL 282
           R+  +S  R   H      +   E  M+F   L+  G  D+ D+ RE+RLDVD+MSYEEL
Sbjct: 553 RNQIISEIRQVLHAMRRGENLRVEDYMVFDP-LIYQGMTDMHDRHREMRLDVDNMSYEEL 612

Query: 283 LELGERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMG 342
           L LGERIG VSTGL E+ I + +++ K    +  SS  L Q    C ICQE+Y   D +G
Sbjct: 613 LALGERIGDVSTGLSEEVILKAMKQHKH-TSSSPSSVELHQNIEPCCICQEEYVEGDNLG 672

Query: 343 RLGCGHSYHIHCIKQWLAQKNTCPV 368
            L CGH +H  CIKQW+  KN CP+
Sbjct: 673 TLKCGHEFHKDCIKQWVMIKNLCPI 695

[Close]

BLAST of CmoCh18G000420 vs. Swiss-Prot
Match: MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-25
Identity = 77/210 (36.67%), Postives = 115/210 (54.76%), Query Frame = 1


Query: 159 GPGIGFSADAAASVDCVVARRHASGRGKIDLEKMTQRERSYLGRRTVNPETLLLLESDSD 218
           GP +  S++ AA+     +R H S + +  L  + +R+  +L  R +       L +D+D
Sbjct: 466 GPSV--SSNEAAAPSGSSSRSHRSRQRRSGL--LLERQNDHLHLRHLGRS----LAADND 525

Query: 219 LPTARSLEVSRSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMS 278
               R+  +S  R          +   E  M+F   L+  G  ++ D+ R++RLDVD+MS
Sbjct: 526 ---GRNRLISEIRQVLSAMRRGENLRFEDYMVFDP-LIYQGMAEMHDRHRDMRLDVDNMS 585

Query: 279 YEELLELGERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRK-CSICQEDYEP 338
           YEELL LGERIG VSTGL E+ I + +++ K       SS   S  D + C +CQE+Y  
Sbjct: 586 YEELLALGERIGDVSTGLSEEVILKVMKQHK-----HTSSAAGSHQDMEPCCVCQEEYAE 645

Query: 339 DDEMGRLGCGHSYHIHCIKQWLAQKNTCPV 368
            D++G LGCGH +H  C+KQWL  KN CP+
Sbjct: 646 GDDLGTLGCGHEFHTACVKQWLMLKNLCPI 658

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BLAST of CmoCh18G000420 vs. Swiss-Prot
Match: RHG1A_ARATH (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana GN=RHG1A PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-23
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 1


Query: 246 EQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGLKEDEIGRCI 305
           E +M+   S+L  G     D++R++RLDVD+MSYEELL L ERIG V TG+ E+ I   +
Sbjct: 561 EDVMLLNHSVLFDGATG-HDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNRL 620

Query: 306 RKTKPLVVNELSSYLLSQMDRK-CSICQEDYEPDDEMGRLGCGHSYHIHCIKQWLAQKNT 365
           ++ K        S   S  D + C +CQE+Y   ++MG L CGH +H  CIK+WL QKN 
Sbjct: 621 KQRK------YKSNTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNL 676

Query: 366 CPV 368
           CP+
Sbjct: 681 CPI 676

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BLAST of CmoCh18G000420 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.5e-12
Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 1


Query: 272 LDVDDMSYEELLELGERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSIC 331
           +D D++SYEELL LG+ +G  S GL  D I     K      N+  +      +  C IC
Sbjct: 238 MDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGT------NESCVIC 297

Query: 332 QEDYEPDDEMGRLGCGHSYHIHCIKQWLAQKNTCPV 368
           + DYE D+++  L C HSYH  CI  WL     CPV
Sbjct: 298 RLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPV 327

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BLAST of CmoCh18G000420 vs. TrEMBL
Match: A0A0A0LQF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042600 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 3.1e-174
Identity = 318/371 (85.71%), Postives = 342/371 (92.18%), Query Frame = 1


Query: 1   MPVVTRASTMDEHIKLRRPRS---HLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTF 60
           MPVVT    + EH+KLRRPRS   HL QPISESDPNPSIPSI+QSTRCKSTISSLLLSTF
Sbjct: 1   MPVVT----VGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  TNNATNGTNESLPSSV-PTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKN 120
           +NN T+G NESLPSS+  TNRKK +FSSAT RGLGCT+AASQQV+VPAVIRTSADW+KK 
Sbjct: 61  SNNTTSGPNESLPSSIITTNRKKNNFSSATLRGLGCTTAASQQVSVPAVIRTSADWEKKK 120

Query: 121 TRKKKQKNSKNKTHQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180
           TRKKKQK+SKNKT QGIVD SHFQ NS  NSASCLDAQDVWCGPGIGFSADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGIVDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLEKMTQRERSYLGRRTVNPETLLLLESDSDLPTARSLEVSRSRYYRHV 240
           ARRHASGRGKIDLEK+ QRERS LGRRTV+PETLL L+SDS++PTARSLE+SRSRYYRHV
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCLGRRTVSPETLLFLDSDSEIPTARSLELSRSRYYRHV 240

Query: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGL 300
           RHPSPDGLAE IMMFQSSLLMGGRFD+ DQFRELRLDVD+MSYEELLELGERIGHVSTGL
Sbjct: 241 RHPSPDGLAE-IMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIK 360
           K+DEIGRCIRK KP VVNEL+++LLSQMDRKCSICQEDYEPDDEMG+L CGHSYHIHCIK
Sbjct: 301 KDDEIGRCIRKMKPHVVNELTTHLLSQMDRKCSICQEDYEPDDEMGKLECGHSYHIHCIK 360

Query: 361 QWLAQKNTCPV 368
           QWLAQKNTCPV
Sbjct: 361 QWLAQKNTCPV 366

[Close]

BLAST of CmoCh18G000420 vs. TrEMBL
Match: M5WUI3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007205mg PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.2e-119
Identity = 244/384 (63.54%), Postives = 292/384 (76.04%), Query Frame = 1


Query: 1   MPVVTRAST-MDEHIKLRRPRSHLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTFTN 60
           MPVVT +ST + EHIK RRPRS    PIS++DP PSI   +QSTRCKSTISSLLLS+FT 
Sbjct: 1   MPVVTESSTTVAEHIKWRRPRSQFSPPISDTDPTPSI---IQSTRCKSTISSLLLSSFTT 60

Query: 61  NATNGTNESLPSSVPTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKNTRK 120
           N    TNE+LP+S+  N+KKT+FSS+TFRGLGC ++ASQQV+VPAVIR SADWQ K  +K
Sbjct: 61  N----TNETLPTSL-NNKKKTNFSSSTFRGLGCAASASQQVSVPAVIRNSADWQGKKVKK 120

Query: 121 KKQK---NSKNKT------------HQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGF 180
           KKQK   N+KN T            HQG VDG  F      NSA+C+D QDVWCGPGIGF
Sbjct: 121 KKQKKNINTKNNTSNDKNEYKDKTQHQGAVDGPSF----GLNSATCMDFQDVWCGPGIGF 180

Query: 181 SADAAASVDCVVARRHASGRGKIDLEKM-TQRERSYLGRRTVNPETLLLLESDSDLPTAR 240
           SA+ A SVDCVVARR+ SGRGKID +K+ + RER  L RRTV+PET+  L+S+ D  T+R
Sbjct: 181 SAETAGSVDCVVARRNVSGRGKIDGDKLSSHRERPCLARRTVSPETVSFLDSEPDFVTSR 240

Query: 241 -SLEVSRSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEEL 300
              EV   R YRHVRHPSP+GLAE IM+FQSSLLMGGR    D+FR+ RLDVD+MSYEEL
Sbjct: 241 PESEVFGGRCYRHVRHPSPEGLAE-IMLFQSSLLMGGRL---DRFRDWRLDVDNMSYEEL 300

Query: 301 LELGERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMG 360
           LELG+RIGHVSTGLKE EI  C+RK K  ++++LS + L Q+DRKC ICQE+YE  D++G
Sbjct: 301 LELGDRIGHVSTGLKEHEISCCLRKIKLSMLSDLSPHSLGQVDRKCIICQEEYEVADDLG 360

Query: 361 RLGCGHSYHIHCIKQWLAQKNTCP 367
            L CGH++H+ CIKQWLAQKNTCP
Sbjct: 361 SLHCGHNFHLQCIKQWLAQKNTCP 368

[Close]

BLAST of CmoCh18G000420 vs. TrEMBL
Match: A0A0L9TIN5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1091s001400 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.0e-113
Identity = 235/382 (61.52%), Postives = 285/382 (74.61%), Query Frame = 1


Query: 1   MPVVTRAST--MDEHIKLRRPRSHLRQ----PISESDPNPSIPSIVQSTRCKSTISSLLL 60
           MPVVT  +T  + EHIK RRPR+        PI ESDPNP IPSI+QSTR KSTISSLLL
Sbjct: 1   MPVVTNRTTPTVAEHIKWRRPRNQFNHQHHHPIPESDPNPQIPSIIQSTRSKSTISSLLL 60

Query: 61  STFTNNATNGTNESLP-SSVPTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQ 120
           STF+NN  +  N+S   ++   ++KKT+FS+ATFRGLGCT+ ASQQV+VPAVIR+SADWQ
Sbjct: 61  STFSNNTPSSNNDSPTINATAQSKKKTNFSAATFRGLGCTAGASQQVSVPAVIRSSADWQ 120

Query: 121 KKNTRKKKQKNS----KNKT-HQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADA 180
            K TRKKK K +    KNKT H GI++GS+           C+D QDVWCGPGIGFSADA
Sbjct: 121 GKKTRKKKHKRTTNGGKNKTFHGGILEGSN---------PGCVDFQDVWCGPGIGFSADA 180

Query: 181 AASVDCVVARRHASGRGKIDLEKMTQRER-SYLGRRTVNPETLLLLESDSDLPTARSLEV 240
           AASVDCVVAR++ S RGKID++K+T RER SY+GRRT   ET   L++DSD+ T RS   
Sbjct: 181 AASVDCVVARKNVSSRGKIDVDKITHRERSSYVGRRT---ETFTFLDTDSDIFTPRSASD 240

Query: 241 S--RSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLEL 300
           S   + YYRHVR PS DG AE IMM Q SLLMGG+ +  DQ+R+ RLDVD+MSYE+LLEL
Sbjct: 241 SYGTATYYRHVRDPSSDGFAE-IMMLQGSLLMGGQLNSHDQYRDWRLDVDNMSYEQLLEL 300

Query: 301 GERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLG 360
           GERIGHV+TGLKEDE+GR IRK +    ++ S +   Q+D++CSICQE+YE  DE+GRL 
Sbjct: 301 GERIGHVNTGLKEDEMGRNIRKARLQFWDDTSKH---QIDKECSICQEEYEAGDELGRLN 360

Query: 361 CGHSYHIHCIKQWLAQKNTCPV 368
           C HSYH  CIKQW++QKN CPV
Sbjct: 361 CEHSYHFQCIKQWVSQKNFCPV 366

[Close]

BLAST of CmoCh18G000420 vs. TrEMBL
Match: A0A0S3QWN0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G010400 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.0e-113
Identity = 235/382 (61.52%), Postives = 285/382 (74.61%), Query Frame = 1


Query: 1   MPVVTRAST--MDEHIKLRRPRSHLRQ----PISESDPNPSIPSIVQSTRCKSTISSLLL 60
           MPVVT  +T  + EHIK RRPR+        PI ESDPNP IPSI+QSTR KSTISSLLL
Sbjct: 1   MPVVTNRTTPTVAEHIKWRRPRNQFNHQHHHPIPESDPNPQIPSIIQSTRSKSTISSLLL 60

Query: 61  STFTNNATNGTNESLP-SSVPTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQ 120
           STF+NN  +  N+S   ++   ++KKT+FS+ATFRGLGCT+ ASQQV+VPAVIR+SADWQ
Sbjct: 61  STFSNNTPSSNNDSPTINATAQSKKKTNFSAATFRGLGCTAGASQQVSVPAVIRSSADWQ 120

Query: 121 KKNTRKKKQKNS----KNKT-HQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADA 180
            K TRKKK K +    KNKT H GI++GS+           C+D QDVWCGPGIGFSADA
Sbjct: 121 GKKTRKKKHKRTTNGGKNKTFHGGILEGSN---------PGCVDFQDVWCGPGIGFSADA 180

Query: 181 AASVDCVVARRHASGRGKIDLEKMTQRER-SYLGRRTVNPETLLLLESDSDLPTARSLEV 240
           AASVDCVVAR++ S RGKID++K+T RER SY+GRRT   ET   L++DSD+ T RS   
Sbjct: 181 AASVDCVVARKNVSSRGKIDVDKITHRERSSYVGRRT---ETFTFLDTDSDIFTPRSASD 240

Query: 241 S--RSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLEL 300
           S   + YYRHVR PS DG AE IMM Q SLLMGG+ +  DQ+R+ RLDVD+MSYE+LLEL
Sbjct: 241 SYGTATYYRHVRDPSSDGFAE-IMMLQGSLLMGGQLNSHDQYRDWRLDVDNMSYEQLLEL 300

Query: 301 GERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLG 360
           GERIGHV+TGLKEDE+GR IRK +    ++ S +   Q+D++CSICQE+YE  DE+GRL 
Sbjct: 301 GERIGHVNTGLKEDEMGRNIRKARLQFWDDTSKH---QIDKECSICQEEYEAGDELGRLN 360

Query: 361 CGHSYHIHCIKQWLAQKNTCPV 368
           C HSYH  CIKQW++QKN CPV
Sbjct: 361 CEHSYHFQCIKQWVSQKNFCPV 366

[Close]

BLAST of CmoCh18G000420 vs. TrEMBL
Match: V7CT75_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G325200g PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 5.8e-112
Identity = 233/382 (60.99%), Postives = 284/382 (74.35%), Query Frame = 1


Query: 1   MPVVTRAST--MDEHIKLRRPRS----HLRQPISESDPNPSIPSIVQSTRCKSTISSLLL 60
           MPVVT  +T  + EHIK RRPR+    H   PI ESDPNP IPSI+QS R KSTISSLLL
Sbjct: 1   MPVVTNTTTPTVAEHIKWRRPRNQFSHHHHHPILESDPNPQIPSIIQSARGKSTISSLLL 60

Query: 61  STFTNNATNGTNESLP-SSVPTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQ 120
           STF+NN ++ +N++   +    ++KK++FS+AT RGLGCT+ ASQQV+VPAVIR+SADWQ
Sbjct: 61  STFSNNTSSSSNDTPTINGTAQSKKKSNFSAATLRGLGCTAGASQQVSVPAVIRSSADWQ 120

Query: 121 KKNTRKKKQKNS----KNKT-HQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADA 180
            K TRKKK K +    KNKT H GI++GS+           C+D QDVWCGPGIGFSAD 
Sbjct: 121 GKKTRKKKHKRATSGGKNKTFHGGILEGSN---------PGCVDFQDVWCGPGIGFSADT 180

Query: 181 AASVDCVVARRHASGRGKIDLEKMTQRER-SYLGRRTVNPETLLLLESDSDLPTARSLEV 240
           AASVDCVVAR++ S RGKID++K+T RER SY GRRT   ET   L++DSD+ T RS   
Sbjct: 181 AASVDCVVARKNVSARGKIDVDKITHRERSSYAGRRT---ETYTFLDTDSDIFTPRSASD 240

Query: 241 S--RSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLEL 300
           S   + YYRHVR PS DG AE IMM Q SLLMGG+ +  DQFR+ RLDVD+MSYE+LLEL
Sbjct: 241 SYGTATYYRHVRDPSSDGFAE-IMMLQGSLLMGGQLNSHDQFRDWRLDVDNMSYEQLLEL 300

Query: 301 GERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLG 360
           GERIGHV+TGLKEDE+GR IRK +  + ++ S +   Q+D++CSICQE+YE  DE+GRL 
Sbjct: 301 GERIGHVNTGLKEDEMGRNIRKARLQIWDDTSKH---QIDKECSICQEEYEAGDELGRLN 360

Query: 361 CGHSYHIHCIKQWLAQKNTCPV 368
           C HSYH  CIKQWL+QKN CPV
Sbjct: 361 CEHSYHFQCIKQWLSQKNFCPV 366

[Close]

BLAST of CmoCh18G000420 vs. TAIR10
Match: AT1G73760.1 (AT1G73760.1 RING/U-box superfamily protein)

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 166/381 (43.57%), Postives = 226/381 (59.32%), Query Frame = 1


Query: 2   PVVTRASTMDEHIKLRRPRSHLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTFTNNA 61
           P  + ++T+ +H++L+RPR+H   P   +   P IP    S   KS +SS  L       
Sbjct: 7   PSSSSSTTIGQHMRLQRPRNHRNLPPISTADEPLIPK--PSRVSKSAMSSFFL------- 66

Query: 62  TNGTNESLPSSVPTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKNTR-KK 121
                      +P   KK    +A+FRGLGCT++ASQQV+VPAVIR+SADW   N + KK
Sbjct: 67  -----------LPETTKKKPNGTASFRGLGCTTSASQQVSVPAVIRSSADWDASNFKIKK 126

Query: 122 KQKNSKNKTHQGIVDGSH--FQHNSPFNSASCLDAQDVWCGPGIGFSADAAA--SVDCVV 181
            +K +KNK       GS       S  +S +C    DVWCGPG+GFS DA    S+D VV
Sbjct: 127 TKKKNKNKGSSSYNGGSIKILSEASTSSSVACAAIPDVWCGPGVGFSTDAVVGGSIDTVV 186

Query: 182 A---RRHASGRGKIDLEKMTQRERSY-------LGRRTVNPETLLLLESDSDLPTARSLE 241
           +   RR+   R KID +K      ++       L RR++N E+    +SDS   T+R+ +
Sbjct: 187 SDPPRRNIPVRRKIDGDKTNSNSNNHREGSSSLLPRRSLNQESNPYFDSDSSFLTSRAEQ 246

Query: 242 VSRSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELG 301
             R  Y+RH+R P PDGLAE +MM Q+  +MGG     DQFR++RL+VD+M+YE+LLELG
Sbjct: 247 TDR--YHRHLRLPYPDGLAEMMMM-QNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELG 306

Query: 302 ERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGC 361
           ERIGHV+TGL E +I  C+RK KP   +       +  DRKC ICQ++YE  DE+G L C
Sbjct: 307 ERIGHVNTGLTEKQIKSCLRKVKPCRQD------TTVADRKCIICQDEYEAKDEVGELRC 358

Query: 362 GHSYHIHCIKQWLAQKNTCPV 368
           GH +HI C+ QWL +KN+CPV
Sbjct: 367 GHRFHIDCVNQWLVRKNSCPV 358

[Close]

BLAST of CmoCh18G000420 vs. TAIR10
Match: AT1G17970.1 (AT1G17970.1 RING/U-box superfamily protein)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-63
Identity = 153/373 (41.02%), Postives = 216/373 (57.91%), Query Frame = 1


Query: 7   ASTMDEHIKLRRPRSHLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTFTNNATNGTN 66
           ++T+ EHI+LRR R+   + +  +D +P +  +V      +   +  +S+F    T+ +N
Sbjct: 3   STTIGEHIRLRRARNQTIRHLHAADDDPPLSHVVLPISQPNRFCNSAMSSFFPLPTSSSN 62

Query: 67  ESLPSSVPTNRKKTHFSSATFRGLGC---TSAASQQVTVPAVIRTSADWQKKNTRKKKQK 126
           ES         +K  + +++FRG+GC    +AA+Q+V+VP+VIR SAD   +  + KK+K
Sbjct: 63  EST--------RKKPYQTSSFRGMGCYAAAAAAAQEVSVPSVIRYSADLDARIRKDKKKK 122

Query: 127 NSKNKTHQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAA--SVDCVVARRHA 186
             K+K  +    GS+   +    S    D  DVWC PG+GFS DA    SVD    R   
Sbjct: 123 KHKHKKKKKKNKGSYEDGSIRILSEEARDVIDVWCRPGLGFSTDAVIGRSVDPPRGRNIP 182

Query: 187 SGRGKIDLEKMTQRER---SYLGRRTVNPETLL--LLESDSDLPTARSLEVSR--SRYYR 246
           S R KID++          S L  R +N ET    +  SDS   T+   E +   SR   
Sbjct: 183 SSRRKIDVDNNNYNHTLGSSVLPIRFLNQETHSHDIFNSDSTFVTSSRAEPTMLSSRCRG 242

Query: 247 HVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVST 306
           H+    PD L E + M Q+  +MG   D RD + ELRLDVD MSYE+LLELG+RIG+V+T
Sbjct: 243 HLPRSYPDDLTE-MRMLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLELGDRIGYVNT 302

Query: 307 GLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHC 366
           GLKE EI RC+ K KP V + L       +DRKCSICQ++YE +DE+G L CGHS+H+HC
Sbjct: 303 GLKESEIHRCLGKIKPSVSHTL-------VDRKCSICQDEYEREDEVGELNCGHSFHVHC 359

Query: 367 IKQWLAQKNTCPV 368
           +KQWL++KN CPV
Sbjct: 363 VKQWLSRKNACPV 359

[Close]

BLAST of CmoCh18G000420 vs. TAIR10
Match: AT1G45180.1 (AT1G45180.1 RING/U-box superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-28
Identity = 58/122 (47.54%), Postives = 82/122 (67.21%), Query Frame = 1


Query: 246 EQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGLKEDEIGRCI 305
           E +M+   S+++G   DI D++R++RLDVD+M+YEELL L ERIG V TGL E+ I   +
Sbjct: 516 EDVMLLNQSIMLGAA-DIHDRYRDMRLDVDNMTYEELLSLEERIGDVCTGLNEETISNRL 575

Query: 306 RKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIKQWLAQKNTC 365
           ++ K       SS   SQ    C +CQE+Y+ ++E+GRL CGH +H  CIK+WL QKN C
Sbjct: 576 KQQK-----YKSSTRSSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLC 631

Query: 366 PV 368
           P+
Sbjct: 636 PI 631

[Close]

BLAST of CmoCh18G000420 vs. TAIR10
Match: AT4G31450.1 (AT4G31450.1 RING/U-box superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-28
Identity = 60/133 (45.11%), Postives = 89/133 (66.92%), Query Frame = 1


Query: 246 EQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGLKEDEIGRCI 305
           E +++ ++ LL+GG     DQ R++RLD+D+MSYEELL L ERIG VST L E+ I +C+
Sbjct: 362 EDLLIMETGLLLGG-LSFHDQHRDMRLDIDNMSYEELLALEERIGTVSTALTEEAISKCL 421

Query: 306 RKT----KPLVVNELS-SYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIKQWLA 365
           + +    KPL    ++ S   ++ D KCSICQE+Y   DE+GRL C H+YH+ C+++WL 
Sbjct: 422 KTSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLR 481

Query: 366 QKNTCPVLELRKE 374
            K+ CP+ +   E
Sbjct: 482 IKSWCPICKATAE 493

[Close]

BLAST of CmoCh18G000420 vs. TAIR10
Match: AT2G15530.4 (AT2G15530.4 RING/U-box superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-28
Identity = 73/187 (39.04%), Postives = 102/187 (54.55%), Query Frame = 1


Query: 223 RSLEVSRSRYYRHVRHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEEL 282
           R+  +S  R   H      +   E  M+F   L+  G  D+ D+ RE+RLDVD+MSYEEL
Sbjct: 553 RNQIISEIRQVLHAMRRGENLRVEDYMVFDP-LIYQGMTDMHDRHREMRLDVDNMSYEEL 612

Query: 283 LELGERIGHVSTGLKEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMG 342
           L LGERIG VSTGL E+ I + +++ K    +  SS  L Q    C ICQE+Y   D +G
Sbjct: 613 LALGERIGDVSTGLSEEVILKAMKQHKH-TSSSPSSVELHQNIEPCCICQEEYVEGDNLG 672

Query: 343 RLGCGHSYHIHCIKQWLAQKNTCPVLELRKE--ICVYSIAEAIRILLFLISTDECIYLAE 402
            L CGH +H  CIKQW+  KN CP+    KE  +C++ +     I+   + T + I    
Sbjct: 673 TLKCGHEFHKDCIKQWVMIKNLCPIFRFNKERRLCLFIMRMIKMIVPKPLGTSDKI--GT 732

Query: 403 LNSRIVW 408
           +  R+ W
Sbjct: 733 IQRRLAW 735

[Close]

BLAST of CmoCh18G000420 vs. NCBI nr
Match: gi|778657300|ref|XP_011650643.1| (PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X1 [Cucumis sativus])

HSP 1 Score: 625.9 bits (1613), Expect = 4.8e-176
Identity = 319/371 (85.98%), Postives = 343/371 (92.45%), Query Frame = 1


Query: 1   MPVVTRASTMDEHIKLRRPRS---HLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTF 60
           MPVVT    + EH+KLRRPRS   HL QPISESDPNPSIPSI+QSTRCKSTISSLLLSTF
Sbjct: 1   MPVVT----VGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  TNNATNGTNESLPSSV-PTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKN 120
           +NN T+G NESLPSS+  TNRKK +FSSAT RGLGCT+AASQQV+VPAVIRTSADW+KK 
Sbjct: 61  SNNTTSGPNESLPSSIITTNRKKNNFSSATLRGLGCTTAASQQVSVPAVIRTSADWEKKK 120

Query: 121 TRKKKQKNSKNKTHQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180
           TRKKKQK+SKNKT QGIVD SHFQ NS  NSASCLDAQDVWCGPGIGFSADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGIVDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLEKMTQRERSYLGRRTVNPETLLLLESDSDLPTARSLEVSRSRYYRHV 240
           ARRHASGRGKIDLEK+ QRERS LGRRTV+PETLL L+SDS++PTARSLE+SRSRYYRHV
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCLGRRTVSPETLLFLDSDSEIPTARSLELSRSRYYRHV 240

Query: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGL 300
           RHPSPDGLAEQIMMFQSSLLMGGRFD+ DQFRELRLDVD+MSYEELLELGERIGHVSTGL
Sbjct: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIK 360
           K+DEIGRCIRK KP VVNEL+++LLSQMDRKCSICQEDYEPDDEMG+L CGHSYHIHCIK
Sbjct: 301 KDDEIGRCIRKMKPHVVNELTTHLLSQMDRKCSICQEDYEPDDEMGKLECGHSYHIHCIK 360

Query: 361 QWLAQKNTCPV 368
           QWLAQKNTCPV
Sbjct: 361 QWLAQKNTCPV 367

[Close]

BLAST of CmoCh18G000420 vs. NCBI nr
Match: gi|449439429|ref|XP_004137488.1| (PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X2 [Cucumis sativus])

HSP 1 Score: 619.4 bits (1596), Expect = 4.5e-174
Identity = 318/371 (85.71%), Postives = 342/371 (92.18%), Query Frame = 1


Query: 1   MPVVTRASTMDEHIKLRRPRS---HLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTF 60
           MPVVT    + EH+KLRRPRS   HL QPISESDPNPSIPSI+QSTRCKSTISSLLLSTF
Sbjct: 1   MPVVT----VGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  TNNATNGTNESLPSSV-PTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKN 120
           +NN T+G NESLPSS+  TNRKK +FSSAT RGLGCT+AASQQV+VPAVIRTSADW+KK 
Sbjct: 61  SNNTTSGPNESLPSSIITTNRKKNNFSSATLRGLGCTTAASQQVSVPAVIRTSADWEKKK 120

Query: 121 TRKKKQKNSKNKTHQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180
           TRKKKQK+SKNKT QGIVD SHFQ NS  NSASCLDAQDVWCGPGIGFSADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGIVDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLEKMTQRERSYLGRRTVNPETLLLLESDSDLPTARSLEVSRSRYYRHV 240
           ARRHASGRGKIDLEK+ QRERS LGRRTV+PETLL L+SDS++PTARSLE+SRSRYYRHV
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCLGRRTVSPETLLFLDSDSEIPTARSLELSRSRYYRHV 240

Query: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGL 300
           RHPSPDGLAE IMMFQSSLLMGGRFD+ DQFRELRLDVD+MSYEELLELGERIGHVSTGL
Sbjct: 241 RHPSPDGLAE-IMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIK 360
           K+DEIGRCIRK KP VVNEL+++LLSQMDRKCSICQEDYEPDDEMG+L CGHSYHIHCIK
Sbjct: 301 KDDEIGRCIRKMKPHVVNELTTHLLSQMDRKCSICQEDYEPDDEMGKLECGHSYHIHCIK 360

Query: 361 QWLAQKNTCPV 368
           QWLAQKNTCPV
Sbjct: 361 QWLAQKNTCPV 366

[Close]

BLAST of CmoCh18G000420 vs. NCBI nr
Match: gi|659066788|ref|XP_008461442.1| (PREDICTED: uncharacterized protein LOC103500009 isoform X1 [Cucumis melo])

HSP 1 Score: 618.2 bits (1593), Expect = 1.0e-173
Identity = 316/371 (85.18%), Postives = 340/371 (91.64%), Query Frame = 1


Query: 1   MPVVTRASTMDEHIKLRRPRS---HLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTF 60
           MPVVT    + EH+KLRRPRS   HL QPISESDPNPSIPSI+QSTRCKSTISSLLLSTF
Sbjct: 1   MPVVT----VGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  TNNATNGTNESLPSSV-PTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKN 120
           +NN T+G NESLPSS+  TNRKK +FSSAT RGLGCT+AASQQV+VPAVIRTSADW+ K 
Sbjct: 61  SNNTTSGPNESLPSSIITTNRKKNNFSSATLRGLGCTTAASQQVSVPAVIRTSADWENKK 120

Query: 121 TRKKKQKNSKNKTHQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180
           TRKKKQK+SKNKT QG++D SHFQ NS  NSASCLDAQDVWCGPGIGFSADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGVLDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLEKMTQRERSYLGRRTVNPETLLLLESDSDLPTARSLEVSRSRYYRHV 240
           ARRHASGRGKIDLEK+ QRERS LGRRTV+PETLL L+SDSDL TARSLE+SR+RYYRHV
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCLGRRTVSPETLLFLDSDSDLSTARSLELSRTRYYRHV 240

Query: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGL 300
           RHPSPDGLAEQIMMFQSSLLMGGRFD+ DQFRELRLDVD+MSYEELLELGERIGHVSTGL
Sbjct: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIK 360
           KEDEIGRCIRK KPLVVNEL+++LLSQMDRKCSICQEDYE DDEMG+L CGHSYHI CIK
Sbjct: 301 KEDEIGRCIRKMKPLVVNELTTHLLSQMDRKCSICQEDYEADDEMGKLECGHSYHIQCIK 360

Query: 361 QWLAQKNTCPV 368
           QWLAQKNTCPV
Sbjct: 361 QWLAQKNTCPV 367

[Close]

BLAST of CmoCh18G000420 vs. NCBI nr
Match: gi|778657304|ref|XP_011650652.1| (PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X3 [Cucumis sativus])

HSP 1 Score: 617.1 bits (1590), Expect = 2.2e-173
Identity = 312/358 (87.15%), Postives = 335/358 (93.58%), Query Frame = 1


Query: 14  IKLRRPRS---HLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTFTNNATNGTNESLP 73
           +KLRRPRS   HL QPISESDPNPSIPSI+QSTRCKSTISSLLLSTF+NN T+G NESLP
Sbjct: 1   MKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNNTTSGPNESLP 60

Query: 74  SSV-PTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKNTRKKKQKNSKNKT 133
           SS+  TNRKK +FSSAT RGLGCT+AASQQV+VPAVIRTSADW+KK TRKKKQK+SKNKT
Sbjct: 61  SSIITTNRKKNNFSSATLRGLGCTTAASQQVSVPAVIRTSADWEKKKTRKKKQKSSKNKT 120

Query: 134 HQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAASVDCVVARRHASGRGKIDL 193
            QGIVD SHFQ NS  NSASCLDAQDVWCGPGIGFSADAAASVDCVVARRHASGRGKIDL
Sbjct: 121 QQGIVDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVVARRHASGRGKIDL 180

Query: 194 EKMTQRERSYLGRRTVNPETLLLLESDSDLPTARSLEVSRSRYYRHVRHPSPDGLAEQIM 253
           EK+ QRERS LGRRTV+PETLL L+SDS++PTARSLE+SRSRYYRHVRHPSPDGLAEQIM
Sbjct: 181 EKINQRERSCLGRRTVSPETLLFLDSDSEIPTARSLELSRSRYYRHVRHPSPDGLAEQIM 240

Query: 254 MFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGLKEDEIGRCIRKTK 313
           MFQSSLLMGGRFD+ DQFRELRLDVD+MSYEELLELGERIGHVSTGLK+DEIGRCIRK K
Sbjct: 241 MFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKDDEIGRCIRKMK 300

Query: 314 PLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIKQWLAQKNTCPV 368
           P VVNEL+++LLSQMDRKCSICQEDYEPDDEMG+L CGHSYHIHCIKQWLAQKNTCPV
Sbjct: 301 PHVVNELTTHLLSQMDRKCSICQEDYEPDDEMGKLECGHSYHIHCIKQWLAQKNTCPV 358

[Close]

BLAST of CmoCh18G000420 vs. NCBI nr
Match: gi|659066790|ref|XP_008461518.1| (PREDICTED: uncharacterized protein LOC103500009 isoform X2 [Cucumis melo])

HSP 1 Score: 611.7 bits (1576), Expect = 9.4e-172
Identity = 315/371 (84.91%), Postives = 339/371 (91.37%), Query Frame = 1


Query: 1   MPVVTRASTMDEHIKLRRPRS---HLRQPISESDPNPSIPSIVQSTRCKSTISSLLLSTF 60
           MPVVT    + EH+KLRRPRS   HL QPISESDPNPSIPSI+QSTRCKSTISSLLLSTF
Sbjct: 1   MPVVT----VGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  TNNATNGTNESLPSSV-PTNRKKTHFSSATFRGLGCTSAASQQVTVPAVIRTSADWQKKN 120
           +NN T+G NESLPSS+  TNRKK +FSSAT RGLGCT+AASQQV+VPAVIRTSADW+ K 
Sbjct: 61  SNNTTSGPNESLPSSIITTNRKKNNFSSATLRGLGCTTAASQQVSVPAVIRTSADWENKK 120

Query: 121 TRKKKQKNSKNKTHQGIVDGSHFQHNSPFNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180
           TRKKKQK+SKNKT QG++D SHFQ NS  NSASCLDAQDVWCGPGIGFSADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGVLDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLEKMTQRERSYLGRRTVNPETLLLLESDSDLPTARSLEVSRSRYYRHV 240
           ARRHASGRGKIDLEK+ QRERS LGRRTV+PETLL L+SDSDL TARSLE+SR+RYYRHV
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCLGRRTVSPETLLFLDSDSDLSTARSLELSRTRYYRHV 240

Query: 241 RHPSPDGLAEQIMMFQSSLLMGGRFDIRDQFRELRLDVDDMSYEELLELGERIGHVSTGL 300
           RHPSPDGLAE IMMFQSSLLMGGRFD+ DQFRELRLDVD+MSYEELLELGERIGHVSTGL
Sbjct: 241 RHPSPDGLAE-IMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEIGRCIRKTKPLVVNELSSYLLSQMDRKCSICQEDYEPDDEMGRLGCGHSYHIHCIK 360
           KEDEIGRCIRK KPLVVNEL+++LLSQMDRKCSICQEDYE DDEMG+L CGHSYHI CIK
Sbjct: 301 KEDEIGRCIRKMKPLVVNELTTHLLSQMDRKCSICQEDYEADDEMGKLECGHSYHIQCIK 360

Query: 361 QWLAQKNTCPV 368
           QWLAQKNTCPV
Sbjct: 361 QWLAQKNTCPV 366

The following BLAST results are available for this feature:

BLAST of CmoCh18G000420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HIP1_ORYSJ	9.2e-26	49.14	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP...	[more]
MBR1_ARATH	9.2e-26	44.83	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1	[more]
MBR2_ARATH	1.6e-25	36.67	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1	[more]
RHG1A_ARATH	4.3e-23	44.72	Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana GN=RHG1A PE=2...	[more]
BBR_ARATH	7.5e-12	39.58	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1	[more]

BLAST of CmoCh18G000420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQF5_CUCSA	3.1e-174	85.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042600 PE=4 SV=1	[more]
M5WUI3_PRUPE	2.2e-119	63.54	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007205mg PE=4 SV=1	[more]
A0A0L9TIN5_PHAAN	4.0e-113	61.52	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1091s001400 PE=4 SV=...	[more]
A0A0S3QWN0_PHAAN	4.0e-113	61.52	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G010400 PE=...	[more]
V7CT75_PHAVU	5.8e-112	60.99	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G325200g PE=4 SV=1	[more]

BLAST of CmoCh18G000420 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73760.1	8.1e-73	43.57	RING/U-box superfamily protein	[more]
AT1G17970.1	2.6e-63	41.02	RING/U-box superfamily protein	[more]
AT1G45180.1	2.7e-28	47.54	RING/U-box superfamily protein	[more]
AT4G31450.1	3.6e-28	45.11	RING/U-box superfamily protein	[more]
AT2G15530.4	3.6e-28	39.04	RING/U-box superfamily protein	[more]

BLAST of CmoCh18G000420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657300\|ref\|XP_011650643.1\|	4.8e-176	85.98	PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X1 [Cucumis sativus]	[more]
gi\|449439429\|ref\|XP_004137488.1\|	4.5e-174	85.71	PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X2 [Cucumis sativus]	[more]
gi\|659066788\|ref\|XP_008461442.1\|	1.0e-173	85.18	PREDICTED: uncharacterized protein LOC103500009 isoform X1 [Cucumis melo]	[more]
gi\|778657304\|ref\|XP_011650652.1\|	2.2e-173	87.15	PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X3 [Cucumis sativus]	[more]
gi\|659066790\|ref\|XP_008461518.1\|	9.4e-172	84.91	PREDICTED: uncharacterized protein LOC103500009 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G000420.1	CmoCh18G000420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 327..367 score: 2.4
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 328..368 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 328..369 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 325..367 score: 3.1
None	No IPR available	PANTHER	PTHR22937	RING FINGER CONTAINING PROTEIN	coord: 20..407 score: 2.6E
None	No IPR available	PANTHER	PTHR22937:SF18	F6A14.12 PROTEIN-RELATED	coord: 20..407 score: 2.6E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 322..367 score: 5.78

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G000420	Cucsa.121730	Cucumber (Gy14) v1	cgycmoB0315
CmoCh18G000420	CmaCh13G010070	Cucurbita maxima (Rimu)	cmacmoB224
CmoCh18G000420	CmaCh18G000520	Cucurbita maxima (Rimu)	cmacmoB408
CmoCh18G000420	Cla018476	Watermelon (97103) v1	cmowmB389
CmoCh18G000420	Csa1G042600	Cucumber (Chinese Long) v2	cmocuB380
CmoCh18G000420	MELO3C002110	Melon (DHL92) v3.5.1	cmomeB356
CmoCh18G000420	ClCG04G010890	Watermelon (Charleston Gray)	cmowcgB357
CmoCh18G000420	CSPI01G07000	Wild cucumber (PI 183967)	cmocpiB383
CmoCh18G000420	Lsi02G002120	Bottle gourd (USVL1VR-Ls)	cmolsiB356
CmoCh18G000420	Cp4.1LG09g11340	Cucurbita pepo (Zucchini)	cmocpeB377
CmoCh18G000420	Cp4.1LG20g01260	Cucurbita pepo (Zucchini)	cmocpeB404
CmoCh18G000420	MELO3C002110.2	Melon (DHL92) v3.6.1	cmomedB408
CmoCh18G000420	CsaV3_1G006940	Cucumber (Chinese Long) v3	cmocucB0457
CmoCh18G000420	Cla97C04G077700	Watermelon (97103) v2	cmowmbB402
CmoCh18G000420	Bhi08G001053	Wax gourd	cmowgoB0516
CmoCh18G000420	CsGy1G006820	Cucumber (Gy14) v2	cgybcmoB082
CmoCh18G000420	Carg22741	Silver-seed gourd	carcmoB0699
CmoCh18G000420	Carg04830	Silver-seed gourd	carcmoB0527

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G000420	CmoCh13G010450	Cucurbita moschata (Rifu)	cmocmoB171

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G000420	Cucumber (Gy14) v2	cgybcmoB086
CmoCh18G000420	Silver-seed gourd	carcmoB0812
CmoCh18G000420	Wax gourd	cmowgoB0546
CmoCh18G000420	Cucurbita moschata (Rifu)	cmocmoB064
CmoCh18G000420	Cucurbita pepo (Zucchini)	cmocpeB391
CmoCh18G000420	Cucurbita pepo (Zucchini)	cmocpeB413
CmoCh18G000420	Bottle gourd (USVL1VR-Ls)	cmolsiB377