Carg04830 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04830
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING/U-box superfamily protein
Location	Cucurbita_argyrosperma_scaffold_028 : 1187358 .. 1189309 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGTTGCTCCACAGACTTCTACAATTGGTGAACACATCAATTTGAGAAGACCCAGAAGCCATTTCAGCCAACCCATTTCAGAATCAGATCCAAACCCATCAATCCCTTCGATTATTCAATCCACTCGCTGCAAATCCACCATTTCTTCTCTCCTTCTCTCTACCTTTTCCAATAATTCAACCACCGGAGCCAATGAATGCTTACCCTCTTCCATTGCCACGAACAGGAAGAAGAATAACTTTTCTTCTGCAACTTTCAGGGGACTCGGTTGCACCAACGCTGCTTCTCAGCAGGTATCCGTCCCGGCTGTAATTCGAACTTCAGCGGATTGGGAAAAGAAGAAAACGAGGAAAAAAAAGCAGAAGAACTCCAAGAACAAAACCCATCAAGGAATTGTTGATGCCTCTCATTTTCATCCTAATTCGAGTATCAATTCTGCTAGCTGCTTAGACGCTCAAGATGTTTGGTGTGGCCCTGGAATTGAATTCGCCGCAGATGCGGCTGCTTCTGTGGATTGCGTGGTTGCTAGACGGCATGCTTCTGGAAGGGGAAAAATCGATTTGGATAAGATTAATCAGAGGGAGGTACTCTGTTTTACTCTGTTTTGTACTCTGTTTTAATATATATTTGAACCTCTTTCTCCTATGTCGATGTGTCGCACTGAGAAACAAAAACCCCCAGGTGGGTTCTTGTTGTTAAGCATTCGTGTCGATTTCGTAGCTTAAGAAGCATTTGGGTGTTTATTTTATTTGGGCTTTTCTCTTCTTTTTTTTTTTTATAATCGAACTTTATCGTTTTTGTTTCTTTTCTTCAATAGGGTTCCTCGAAATCAGGCTGAACCTGTTCGGCTTCCATTCTTGTAACTTGTTTGATTCCATTATTCTTCGTAAATCTGAGTATTTAATGCAAATGGGTATGCGTTAGATTTGAAATTTTCCGAATGAAATCTTCATTTAGGGCTATAAAAACGAGAAATCACCTGTTCGTAGTTGATTATTGGTATCAAACTCTGTTCATTGCGTTTTAACTTCCTCTACTTCTACCATGACAGCGTTCTTCTTTAGGAGGAAGACGAACTGTGAATCCCGAGACCCTTTTATATTTGGATTCTGATTCTGATCTTCCAACTGCTCGAACATTTGAACTGTCTCGGAGTCGATATTATCGCCATGTTCGACATCCATCCCCTGATGGCCTTGCCGAGGTGAGCTATCATTTGTAAATATAAGCTTCAGTTGAAACAACCACTTTGATAGGATTCGTTGCTGTTCTAAACTTATAAGTTTCAGTTGAATTCTATGTTCGTCGTGTTCATCTTGTCATTCTATGTTCTTTTTAAGTACCATAAGGGCATCTCTGTTTCACATTGATCATATGAAACTGATTAGCTCCCCTGATACGTTATTAGCAGATTATGATGTTTCAGAGCGGGTTGCTGATGGGTGGAAGATTCGACATACACGACCAGTTTAGGGAATTGCGGCTTGATGTCGATAACATGTCGTACGAGGTTCGTAGCTTTCCTTCCTGTTCTTTCTTGCTACAATGTGATACTCACACCTCTTTGAACAGGAGCTGCTTGAGCTCGGTGAAAGGATTGGGCATGTCAGTACTGGGCTGAAAGAAGACGAGATGGGAAGGTGCATTAGAACAATGAAGCCCCTTGCTGTAAACGAGCTAACAACAACTCACTTGTTATCTCAAATGGATCGGAAGTGCAGCATCTGTCAGGTGAAGTAGAAGCTTTTGGTTTTGCTGGCTTTGATTACCCCAAATTGTTGACAGCCTACAATTGTTGTGTTGTATGAAGCAGGAGGAGTATGATCCAGATGATGAAATGGGTAAGCTGGAATGTGGGCATGGGTATCACGTAGAGTGTATAAAGCAGTGGCTTGCGCAGAAGAATGCGTGCCCGGTGTGTAAGACAGCGCCGGTGGGCCGTGGTTGA

mRNA sequence

ATGCCTGTTGCTCCACAGACTTCTACAATTGGTGAACACATCAATTTGAGAAGACCCAGAAGCCATTTCAGCCAACCCATTTCAGAATCAGATCCAAACCCATCAATCCCTTCGATTATTCAATCCACTCGCTGCAAATCCACCATTTCTTCTCTCCTTCTCTCTACCTTTTCCAATAATTCAACCACCGGAGCCAATGAATGCTTACCCTCTTCCATTGCCACGAACAGGAAGAAGAATAACTTTTCTTCTGCAACTTTCAGGGGACTCGGTTGCACCAACGCTGCTTCTCAGCAGGTATCCGTCCCGGCTGTAATTCGAACTTCAGCGGATTGGGAAAAGAAGAAAACGAGGAAAAAAAAGCAGAAGAACTCCAAGAACAAAACCCATCAAGGAATTGTTGATGCCTCTCATTTTCATCCTAATTCGAGTATCAATTCTGCTAGCTGCTTAGACGCTCAAGATGTTTGGTGTGGCCCTGGAATTGAATTCGCCGCAGATGCGGCTGCTTCTGTGGATTGCGTGGTTGCTAGACGGCATGCTTCTGGAAGGGGAAAAATCGATTTGGATAAGATTAATCAGAGGGAGCGTTCTTCTTTAGGAGGAAGACGAACTGTGAATCCCGAGACCCTTTTATATTTGGATTCTGATTCTGATCTTCCAACTGCTCGAACATTTGAACTGTCTCGGAGTCGATATTATCGCCATGTTCGACATCCATCCCCTGATGGCCTTGCCGAGATTATGATGTTTCAGAGCGGGTTGCTGATGGGTGGAAGATTCGACATACACGACCAGTTTAGGGAATTGCGGCTTGATGTCGATAACATGTCGTACGAGGAGCTGCTTGAGCTCGGTGAAAGGATTGGGCATGTCAGTACTGGGCTGAAAGAAGACGAGATGGGAAGGTGCATTAGAACAATGAAGCCCCTTGCTGTAAACGAGCTAACAACAACTCACTTGTTATCTCAAATGGATCGGAAGTGCAGCATCTGTCAGGAGGAGTATGATCCAGATGATGAAATGGGTAAGCTGGAATGTGGGCATGGGTATCACGTAGAGTGTATAAAGCAGTGGCTTGCGCAGAAGAATGCGTGCCCGGTGTGTAAGACAGCGCCGGTGGGCCGTGGTTGA

Coding sequence (CDS)

ATGCCTGTTGCTCCACAGACTTCTACAATTGGTGAACACATCAATTTGAGAAGACCCAGAAGCCATTTCAGCCAACCCATTTCAGAATCAGATCCAAACCCATCAATCCCTTCGATTATTCAATCCACTCGCTGCAAATCCACCATTTCTTCTCTCCTTCTCTCTACCTTTTCCAATAATTCAACCACCGGAGCCAATGAATGCTTACCCTCTTCCATTGCCACGAACAGGAAGAAGAATAACTTTTCTTCTGCAACTTTCAGGGGACTCGGTTGCACCAACGCTGCTTCTCAGCAGGTATCCGTCCCGGCTGTAATTCGAACTTCAGCGGATTGGGAAAAGAAGAAAACGAGGAAAAAAAAGCAGAAGAACTCCAAGAACAAAACCCATCAAGGAATTGTTGATGCCTCTCATTTTCATCCTAATTCGAGTATCAATTCTGCTAGCTGCTTAGACGCTCAAGATGTTTGGTGTGGCCCTGGAATTGAATTCGCCGCAGATGCGGCTGCTTCTGTGGATTGCGTGGTTGCTAGACGGCATGCTTCTGGAAGGGGAAAAATCGATTTGGATAAGATTAATCAGAGGGAGCGTTCTTCTTTAGGAGGAAGACGAACTGTGAATCCCGAGACCCTTTTATATTTGGATTCTGATTCTGATCTTCCAACTGCTCGAACATTTGAACTGTCTCGGAGTCGATATTATCGCCATGTTCGACATCCATCCCCTGATGGCCTTGCCGAGATTATGATGTTTCAGAGCGGGTTGCTGATGGGTGGAAGATTCGACATACACGACCAGTTTAGGGAATTGCGGCTTGATGTCGATAACATGTCGTACGAGGAGCTGCTTGAGCTCGGTGAAAGGATTGGGCATGTCAGTACTGGGCTGAAAGAAGACGAGATGGGAAGGTGCATTAGAACAATGAAGCCCCTTGCTGTAAACGAGCTAACAACAACTCACTTGTTATCTCAAATGGATCGGAAGTGCAGCATCTGTCAGGAGGAGTATGATCCAGATGATGAAATGGGTAAGCTGGAATGTGGGCATGGGTATCACGTAGAGTGTATAAAGCAGTGGCTTGCGCAGAAGAATGCGTGCCCGGTGTGTAAGACAGCGCCGGTGGGCCGTGGTTGA

Protein sequence

MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNNSTTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRKKKQKNSKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRHASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQKNACPVCKTAPVGRG

Homology

[Close]

BLAST of Carg04830 vs. NCBI nr
Match: XP_022924069.1 (uncharacterized protein LOC111431610 isoform X4 [Cucurbita moschata])

HSP 1 Score: 740.3 bits (1910), Expect = 3.2e-210
Identity = 375/377 (99.47%), Postives = 376/377 (99.73%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60
           MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN
Sbjct: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60

Query: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120
           STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX
Sbjct: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120

Query: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180
           XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH
Sbjct: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180

Query: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240
           ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP
Sbjct: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240

Query: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300
           SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE
Sbjct: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300

Query: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWL 360
           MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDP+DEMGKLECGHGYHVECIKQWL
Sbjct: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPEDEMGKLECGHGYHVECIKQWL 360

Query: 361 AQKNACPVCKTAPVGRG 378
           AQKNACPVCKTA VGRG
Sbjct: 361 AQKNACPVCKTAAVGRG 377

[Close]

BLAST of Carg04830 vs. NCBI nr
Match: XP_022924067.1 (uncharacterized protein LOC111431610 isoform X2 [Cucurbita moschata])

HSP 1 Score: 735.7 bits (1898), Expect = 7.8e-209
Identity = 375/378 (99.21%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60
           MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN
Sbjct: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60

Query: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120
           STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX
Sbjct: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120

Query: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180
           XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH
Sbjct: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180

Query: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240
           ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP
Sbjct: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240

Query: 241 SPDGLAE-IMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKED 300
           SPDGLAE IMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKED
Sbjct: 241 SPDGLAEQIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKED 300

Query: 301 EMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQW 360
           EMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDP+DEMGKLECGHGYHVECIKQW
Sbjct: 301 EMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPEDEMGKLECGHGYHVECIKQW 360

Query: 361 LAQKNACPVCKTAPVGRG 378
           LAQKNACPVCKTA VGRG
Sbjct: 361 LAQKNACPVCKTAAVGRG 378

[Close]

BLAST of Carg04830 vs. NCBI nr
Match: XP_022924068.1 (uncharacterized protein LOC111431610 isoform X3 [Cucurbita moschata])

HSP 1 Score: 735.7 bits (1898), Expect = 7.8e-209
Identity = 375/378 (99.21%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60
           MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN
Sbjct: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60

Query: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120
           STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX
Sbjct: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120

Query: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180
           XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH
Sbjct: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180

Query: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240
           ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP
Sbjct: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240

Query: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300
           SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE
Sbjct: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300

Query: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSIC-QEEYDPDDEMGKLECGHGYHVECIKQW 360
           MGRCIRTMKPLAVNELTTTHLLSQMDRKCSIC QEEYDP+DEMGKLECGHGYHVECIKQW
Sbjct: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQQEEYDPEDEMGKLECGHGYHVECIKQW 360

Query: 361 LAQKNACPVCKTAPVGRG 378
           LAQKNACPVCKTA VGRG
Sbjct: 361 LAQKNACPVCKTAAVGRG 378

[Close]

BLAST of Carg04830 vs. NCBI nr
Match: XP_023000964.1 (uncharacterized protein LOC111495245 isoform X4 [Cucurbita maxima])

HSP 1 Score: 734.9 bits (1896), Expect = 1.3e-208
Identity = 372/377 (98.67%), Postives = 375/377 (99.47%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60
           MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN
Sbjct: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60

Query: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120
           STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX
Sbjct: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120

Query: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180
           XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWC PGIEFAADAAASVDCVVARRH
Sbjct: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCAPGIEFAADAAASVDCVVARRH 180

Query: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240
           ASGRGKIDL+KINQRERSSLGGRRTVNPETLLYLDSDSDLPTAR+FELSRSRYYRHVRHP
Sbjct: 181 ASGRGKIDLEKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARSFELSRSRYYRHVRHP 240

Query: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300
           SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE
Sbjct: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300

Query: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWL 360
           MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDP+DEMGKLECGHGYHVECIKQWL
Sbjct: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPEDEMGKLECGHGYHVECIKQWL 360

Query: 361 AQKNACPVCKTAPVGRG 378
           AQKNACPVCKTA VGRG
Sbjct: 361 AQKNACPVCKTAAVGRG 377

[Close]

BLAST of Carg04830 vs. NCBI nr
Match: XP_023519761.1 (uncharacterized protein LOC111783108 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 733.0 bits (1891), Expect = 5.0e-208
Identity = 372/377 (98.67%), Postives = 374/377 (99.20%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60
           MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN
Sbjct: 1   MPVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN 60

Query: 61  STTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120
           STT ANECLPSSIAT RKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX
Sbjct: 61  STTAANECLPSSIATIRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXX 120

Query: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180
           XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH
Sbjct: 121 XXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRH 180

Query: 181 ASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240
           ASGRGKIDL+KINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP
Sbjct: 181 ASGRGKIDLEKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHP 240

Query: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300
           SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE
Sbjct: 241 SPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE 300

Query: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWL 360
           MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDD+MGKLECGHGYHVECIKQWL
Sbjct: 301 MGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDKMGKLECGHGYHVECIKQWL 360

Query: 361 AQKNACPVCKTAPVGRG 378
           AQKNACPVCKTA VGRG
Sbjct: 361 AQKNACPVCKTAAVGRG 377

[Close]

BLAST of Carg04830 vs. TAIR10
Match: AT1G73760.1 (RING/U-box superfamily protein)

HSP 1 Score: 285.4 bits (729), Expect = 5.0e-77
Identity = 177/384 (46.09%), Postives = 234/384 (60.94%), Query Frame = 0


Query: 2   PVAPQTSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNNS 61
           P +  ++TIG+H+ L+RPR+H + P   +   P IP    S   KS +SS  L       
Sbjct: 7   PSSSSSTTIGQHMRLQRPRNHRNLPPISTADEPLIPK--PSRVSKSAMSSFFL------- 66

Query: 62  TTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXXX 121
                  LP    T +KK N  +A+FRGLGCT +ASQQVSVPAVIR+SADW+    + XX
Sbjct: 67  -------LPE---TTKKKPN-GTASFRGLGCTTSASQQVSVPAVIRSSADWDASNFKIXX 126

Query: 122 XXXXKNKTHQGIVDASH---FHPNSSINSASCLDAQDVWCGPGIEFAADA--AASVDCVV 181
           XXXX         +          S+ +S +C    DVWCGPG+ F+ DA    S+D VV
Sbjct: 127 XXXXXXXXXXXXXNGGSIKILSEASTSSSVACAAIPDVWCGPGVGFSTDAVVGGSIDTVV 186

Query: 182 A---RRHASGRGKIDLDKINQRER------SSLGGRRTVNPETLLYLDSDSDLPTARTFE 241
           +   RR+   R KID DK N          SSL  RR++N E+  Y DSDS   T+R  +
Sbjct: 187 SDPPRRNIPVRRKIDGDKTNSNSNNHREGSSSLLPRRSLNQESNPYFDSDSSFLTSRAEQ 246

Query: 242 LSRSRYYRHVRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGE 301
               RY+RH+R P PDGLAE+MM Q+G +MGG     DQFR++RL+VDNM+YE+LLELGE
Sbjct: 247 --TDRYHRHLRLPYPDGLAEMMMMQNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGE 306

Query: 302 RIGHVSTGLKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLEC 361
           RIGHV+TGL E ++  C+R +KP    + TT       DRKC ICQ+EY+  DE+G+L C
Sbjct: 307 RIGHVNTGLTEKQIKSCLRKVKP--CRQDTTV-----ADRKCIICQDEYEAKDEVGELRC 361

Query: 362 GHGYHVECIKQWLAQKNACPVCKT 372
           GH +H++C+ QWL +KN+CPVCKT
Sbjct: 367 GHRFHIDCVNQWLVRKNSCPVCKT 361

[Close]

BLAST of Carg04830 vs. TAIR10
Match: AT1G17970.1 (RING/U-box superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-56
Identity = 149/381 (39.11%), Postives = 210/381 (55.12%), Query Frame = 0


Query: 7   TSTIGEHINLRRPRSHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNNSTTGAN 66
           ++TIGEHI LRR R+   + +  +D +P +  ++      +   +  +S+F    T+ +N
Sbjct: 3   STTIGEHIRLRRARNQTIRHLHAADDDPPLSHVVLPISQPNRFCNSAMSSFFPLPTSSSN 62

Query: 67  ECLPSSIATNRKKNNFSSATFRGLGCTNA---ASQQVSVPAVIRTSADWEKKKTRXXXXX 126
           E        + +K  + +++FRG+GC  A           +VIR           XXXXX
Sbjct: 63  E--------STRKKPYQTSSFRGMGCYAAXXXXXXXXXXXSVIRXXXXXXXXXXXXXXXX 122

Query: 127 XXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADA--AASVDCVVARRHA 186
           XX           S+   +  I S    D  DVWC PG+ F+ DA    SVD    R   
Sbjct: 123 XXXXXXXXXXXXXSYEDGSIRILSEEARDVIDVWCRPGLGFSTDAVIGRSVDPPRGRNIP 182

Query: 187 SGRGKIDLDKINQRER--SSLGGRRTVNPETLLY--LDSDSDLPTARTFE--LSRSRYYR 246
           S R KID+D  N      SS+   R +N ET  +   +SDS   T+   E  +  SR   
Sbjct: 183 SSRRKIDVDNNNYNHTLGSSVLPIRFLNQETHSHDIFNSDSTFVTSSRAEPTMLSSRCRG 242

Query: 247 HVRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTG 306
           H+    PD L E+ M Q+G +MG   D  D + ELRLDVD+MSYE+LLELG+RIG+V+TG
Sbjct: 243 HLPRSYPDDLTEMRMLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLELGDRIGYVNTG 302

Query: 307 LKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVEC 366
           LKE E+ RC+  +KP      + +H L  +DRKCSICQ+EY+ +DE+G+L CGH +HV C
Sbjct: 303 LKESEIHRCLGKIKP------SVSHTL--VDRKCSICQDEYEREDEVGELNCGHSFHVHC 362

Query: 367 IKQWLAQKNACPVCKTAPVGR 377
           +KQWL++KNACPVCK A  G+
Sbjct: 363 VKQWLSRKNACPVCKKAAYGK 367

[Close]

BLAST of Carg04830 vs. TAIR10
Match: AT4G31450.1 (RING/U-box superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-34
Identity = 65/128 (50.78%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 247 EIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRCIR 306
           ++++ ++GLL+GG    HDQ R++RLD+DNMSYEELL L ERIG VST L E+ + +C++
Sbjct: 363 DLLIMETGLLLGG-LSFHDQHRDMRLDIDNMSYEELLALEERIGTVSTALTEEAISKCLK 422

Query: 307 T----MKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQ 366
           T    MKPL+   +T +   ++ D KCSICQEEY   DE+G+L C H YHV+C+++WL  
Sbjct: 423 TSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRI 482

Query: 367 KNACPVCK 371
           K+ CP+CK
Sbjct: 483 KSWCPICK 489

[Close]

BLAST of Carg04830 vs. TAIR10
Match: AT1G45180.1 (RING/U-box superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-32
Identity = 62/136 (45.59%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 236 HVRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTG 295
           H+R      L ++M+    +++G   DIHD++R++RLDVDNM+YEELL L ERIG V TG
Sbjct: 506 HMRRAGNLRLEDVMLLNQSIMLGAA-DIHDRYRDMRLDVDNMTYEELLSLEERIGDVCTG 565

Query: 296 LKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVEC 355
           L E+ +   ++  K        ++   SQ    C +CQEEY  ++E+G+LECGH +H +C
Sbjct: 566 LNEETISNRLKQQK------YKSSTRSSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQC 625

Query: 356 IKQWLAQKNACPVCKT 372
           IK+WL QKN CP+CKT
Sbjct: 626 IKEWLKQKNLCPICKT 634

[Close]

BLAST of Carg04830 vs. TAIR10
Match: AT5G10650.1 (RING/U-box superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 7.1e-31
Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 237 VRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 296
           + H       ++   ++ L   G F  +DQ R++RLD+DNMSYEELL LG+++G VST L
Sbjct: 383 IEHDEELTYEQLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTAL 442

Query: 297 KEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECI 356
            E+ + R ++       +E  +  L    D KCSICQEEY   DE+G + C H YHV C+
Sbjct: 443 SEEALSRSLKQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCV 502

Query: 357 KQWLAQKNACPVCKTA 373
           +QWL  KN CP+CKT+
Sbjct: 503 QQWLRMKNWCPICKTS 518

[Close]

BLAST of Carg04830 vs. Swiss-Prot
Match: sp|Q9ZQF9|MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.3e-29
Identity = 66/144 (45.83%), Postives = 86/144 (59.72%), Query Frame = 0


Query: 228 LSRSRYYRHVRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGE 287
           +S  R   H      +   E  M    L+  G  D+HD+ RE+RLDVDNMSYEELL LGE
Sbjct: 557 ISEIRQVLHAMRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDVDNMSYEELLALGE 616

Query: 288 RIGHVSTGLKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLEC 347
           RIG VSTGL E+ + + ++  K  + +  +    L Q    C ICQEEY   D +G L+C
Sbjct: 617 RIGDVSTGLSEEVILKAMKQHKHTSSSPSSVE--LHQNIEPCCICQEEYVEGDNLGTLKC 676

Query: 348 GHGYHVECIKQWLAQKNACPVCKT 372
           GH +H +CIKQW+  KN CP+CKT
Sbjct: 677 GHEFHKDCIKQWVMIKNLCPICKT 698

[Close]

BLAST of Carg04830 vs. Swiss-Prot
Match: sp|Q7XTV7|HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-27
Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 259 GRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRCIRTMKPLAVNELTT 318
           G  DIHD+ R++RLD+DNMSYEELL L ERIG+VSTGL E+E+ + ++  K       ++
Sbjct: 555 GGVDIHDRHRDMRLDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRK------FSS 614

Query: 319 THLLSQMDRK-CSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQKNACPVCK 371
             L + ++ + C ICQEEY   D++G L+CGH +HV C++QWL  KN CP+CK
Sbjct: 615 WRLEASVEEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPICK 661

[Close]

BLAST of Carg04830 vs. Swiss-Prot
Match: sp|O49500|MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.0e-27
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 255 LLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRCIRTMKPLAVN 314
           L+  G  ++HD+ R++RLDVDNMSYEELL LGERIG VSTGL E+ +      +K +  +
Sbjct: 550 LIYQGMAEMHDRHRDMRLDVDNMSYEELLALGERIGDVSTGLSEEVI------LKVMKQH 609

Query: 315 ELTTTHLLSQMDRK-CSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQKNACPVCKT 372
           + T++   S  D + C +CQEEY   D++G L CGH +H  C+KQWL  KN CP+CKT
Sbjct: 610 KHTSSAAGSHQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKT 661

[Close]

BLAST of Carg04830 vs. Swiss-Prot
Match: sp|Q9FMM4|RHG1A_ARATH (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RHG1A PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-26
Identity = 59/128 (46.09%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 245 LAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRC 304
           L ++M+    +L  G    HD++R++RLDVDNMSYEELL L ERIG V TG+ E+ +   
Sbjct: 560 LEDVMLLNHSVLFDGATG-HDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNR 619

Query: 305 IRTMKPLAVNELTTTHLLSQMDRK-CSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQK 364
           ++  K         ++  S  D + C +CQEEY   ++MG LECGH +H +CIK+WL QK
Sbjct: 620 LKQRK-------YKSNTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQK 679

Query: 365 NACPVCKT 372
           N CP+CKT
Sbjct: 680 NLCPICKT 679

[Close]

BLAST of Carg04830 vs. Swiss-Prot
Match: sp|Q5QLR5|ZFP1_ORYSJ (Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZFP1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 262 DIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRCIRT--MKPLAVNELTTT 321
           ++ D+ R++RLD+D+M+YEELL L E+IG V+TGL +  +   ++T    P +      +
Sbjct: 402 NVVDEHRDMRLDIDSMTYEELLALEEQIGDVNTGLAKSYIVEKLKTSLFVPGSSCMSNKS 461

Query: 322 HLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQKNACPVCKTAPVGRG 378
              S  +  C ICQEEY   + +G L+CGH YH +CIKQWL  KN CP+CKT  +  G
Sbjct: 462 SESSMENDACIICQEEYQVKECIGTLDCGHRYHEDCIKQWLMVKNLCPICKTTALSTG 519

[Close]

BLAST of Carg04830 vs. TrEMBL
Match: tr|A0A1S3CET5|A0A1S3CET5_CUCME (E3 ubiquitin-protein ligase MBR2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500009 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 2.7e-165
Identity = 305/381 (80.05%), Postives = 324/381 (85.04%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPR---SHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60
           MPV     T+GEH+ LRRPR   SH +QPISESDPNPSIPSIIQSTRCKSTISSLLLSTF
Sbjct: 1   MPVV----TVGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  SNNST-TGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKK 120
           SNN+T                      SAT RGLGCT AASQQVSVPAVIRTSADWE KK
Sbjct: 61  SNNTTXXXXXXXXXXXXXXXXXXXXXXSATLRGLGCTTAASQQVSVPAVIRTSADWENKK 120

Query: 121 TRXXXXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVV 180
           TR       KNKT QG++DASHF PNSS+NSASCLDAQDVWCGPGI F+ADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGVLDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRH 240
           ARRHASGRGKIDL+KINQRERS L GRRTV+PETLL+LDSDSDL TAR+ ELSR+RYYRH
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCL-GRRTVSPETLLFLDSDSDLSTARSLELSRTRYYRH 240

Query: 241 VRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300
           VRHPSPDGLAEIMMFQS LLMGGRFD+HDQFRELRLDVDNMSYEELLELGERIGHVSTGL
Sbjct: 241 VRHPSPDGLAEIMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECI 360
           KEDE+GRCIR MKPL VNEL TTHLLSQMDRKCSICQE+Y+ DDEMGKLECGH YH++CI
Sbjct: 301 KEDEIGRCIRKMKPLVVNEL-TTHLLSQMDRKCSICQEDYEADDEMGKLECGHSYHIQCI 360

Query: 361 KQWLAQKNACPVCKTAPVGRG 378
           KQWLAQKN CPVCKTA VGRG
Sbjct: 361 KQWLAQKNTCPVCKTAAVGRG 375

[Close]

BLAST of Carg04830 vs. TrEMBL
Match: tr|A0A1S3CER0|A0A1S3CER0_CUCME (E3 ubiquitin-protein ligase MBR2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500009 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 6.6e-164
Identity = 305/382 (79.84%), Postives = 324/382 (84.82%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPR---SHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60
           MPV     T+GEH+ LRRPR   SH +QPISESDPNPSIPSIIQSTRCKSTISSLLLSTF
Sbjct: 1   MPVV----TVGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  SNNST-TGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKK 120
           SNN+T                      SAT RGLGCT AASQQVSVPAVIRTSADWE KK
Sbjct: 61  SNNTTXXXXXXXXXXXXXXXXXXXXXXSATLRGLGCTTAASQQVSVPAVIRTSADWENKK 120

Query: 121 TRXXXXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVV 180
           TR       KNKT QG++DASHF PNSS+NSASCLDAQDVWCGPGI F+ADAAASVDCVV
Sbjct: 121 TRKKKQKSSKNKTQQGVLDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRH 240
           ARRHASGRGKIDL+KINQRERS L GRRTV+PETLL+LDSDSDL TAR+ ELSR+RYYRH
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCL-GRRTVSPETLLFLDSDSDLSTARSLELSRTRYYRH 240

Query: 241 VRHPSPDGLAE-IMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTG 300
           VRHPSPDGLAE IMMFQS LLMGGRFD+HDQFRELRLDVDNMSYEELLELGERIGHVSTG
Sbjct: 241 VRHPSPDGLAEQIMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTG 300

Query: 301 LKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVEC 360
           LKEDE+GRCIR MKPL VNEL TTHLLSQMDRKCSICQE+Y+ DDEMGKLECGH YH++C
Sbjct: 301 LKEDEIGRCIRKMKPLVVNEL-TTHLLSQMDRKCSICQEDYEADDEMGKLECGHSYHIQC 360

Query: 361 IKQWLAQKNACPVCKTAPVGRG 378
           IKQWLAQKN CPVCKTA VGRG
Sbjct: 361 IKQWLAQKNTCPVCKTAAVGRG 376

[Close]

BLAST of Carg04830 vs. TrEMBL
Match: tr|A0A0A0LQF5|A0A0A0LQF5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042600 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 6.8e-161
Identity = 306/381 (80.31%), Postives = 324/381 (85.04%), Query Frame = 0


Query: 1   MPVAPQTSTIGEHINLRRPR---SHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60
           MPV     T+GEH+ LRRPR   SH +QPISESDPNPSIPSIIQSTRCKSTISSLLLSTF
Sbjct: 1   MPVV----TVGEHMKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTF 60

Query: 61  SNNS-TTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKK 120
           SNN+                        AT RGLGCT AASQQVSVPAVIRTSADWEKK 
Sbjct: 61  SNNTXXXXXXXXXXXXXXXXXXXXXXXXATLRGLGCTTAASQQVSVPAVIRTSADWEKKX 120

Query: 121 TRXXXXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVV 180
             XXXXXXX   T QGIVDASHF PNSS+NSASCLDAQDVWCGPGI F+ADAAASVDCVV
Sbjct: 121 XXXXXXXXXXXXTQQGIVDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVV 180

Query: 181 ARRHASGRGKIDLDKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRH 240
           ARRHASGRGKIDL+KINQRERS L GRRTV+PETLL+LDSDS++PTAR+ ELSRSRYYRH
Sbjct: 181 ARRHASGRGKIDLEKINQRERSCL-GRRTVSPETLLFLDSDSEIPTARSLELSRSRYYRH 240

Query: 241 VRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300
           VRHPSPDGLAEIMMFQS LLMGGRFD+HDQFRELRLDVDNMSYEELLELGERIGHVSTGL
Sbjct: 241 VRHPSPDGLAEIMMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGL 300

Query: 301 KEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECI 360
           K+DE+GRCIR MKP  VNEL TTHLLSQMDRKCSICQE+Y+PDDEMGKLECGH YH+ CI
Sbjct: 301 KDDEIGRCIRKMKPHVVNEL-TTHLLSQMDRKCSICQEDYEPDDEMGKLECGHSYHIHCI 360

Query: 361 KQWLAQKNACPVCKTAPVGRG 378
           KQWLAQKN CPVCKTA VGRG
Sbjct: 361 KQWLAQKNTCPVCKTAAVGRG 375

[Close]

BLAST of Carg04830 vs. TrEMBL
Match: tr|A0A1S3CEY2|A0A1S3CEY2_CUCME (E3 ubiquitin-protein ligase MBR2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500009 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 1.5e-160
Identity = 298/369 (80.76%), Postives = 316/369 (85.64%), Query Frame = 0


Query: 14  INLRRPR---SHFSQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNNST-TGANECL 73
           + LRRPR   SH +QPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNN+T        
Sbjct: 1   MKLRRPRSDLSHLNQPISESDPNPSIPSIIQSTRCKSTISSLLLSTFSNNTTXXXXXXXX 60

Query: 74  PSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKTRXXXXXXXKNKT 133
                         SAT RGLGCT AASQQVSVPAVIRTSADWE KKTR       KNKT
Sbjct: 61  XXXXXXXXXXXXXXSATLRGLGCTTAASQQVSVPAVIRTSADWENKKTRKKKQKSSKNKT 120

Query: 134 HQGIVDASHFHPNSSINSASCLDAQDVWCGPGIEFAADAAASVDCVVARRHASGRGKIDL 193
            QG++DASHF PNSS+NSASCLDAQDVWCGPGI F+ADAAASVDCVVARRHASGRGKIDL
Sbjct: 121 QQGVLDASHFQPNSSMNSASCLDAQDVWCGPGIGFSADAAASVDCVVARRHASGRGKIDL 180

Query: 194 DKINQRERSSLGGRRTVNPETLLYLDSDSDLPTARTFELSRSRYYRHVRHPSPDGLAE-I 253
           +KINQRERS L GRRTV+PETLL+LDSDSDL TAR+ ELSR+RYYRHVRHPSPDGLAE I
Sbjct: 181 EKINQRERSCL-GRRTVSPETLLFLDSDSDLSTARSLELSRTRYYRHVRHPSPDGLAEQI 240

Query: 254 MMFQSGLLMGGRFDIHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEMGRCIRTM 313
           MMFQS LLMGGRFD+HDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDE+GRCIR M
Sbjct: 241 MMFQSSLLMGGRFDLHDQFRELRLDVDNMSYEELLELGERIGHVSTGLKEDEIGRCIRKM 300

Query: 314 KPLAVNELTTTHLLSQMDRKCSICQEEYDPDDEMGKLECGHGYHVECIKQWLAQKNACPV 373
           KPL VNEL TTHLLSQMDRKCSICQE+Y+ DDEMGKLECGH YH++CIKQWLAQKN CPV
Sbjct: 301 KPLVVNEL-TTHLLSQMDRKCSICQEDYEADDEMGKLECGHSYHIQCIKQWLAQKNTCPV 360

Query: 374 CKTAPVGRG 378
           CKTA VGRG
Sbjct: 361 CKTAAVGRG 367

[Close]

BLAST of Carg04830 vs. TrEMBL
Match: tr|A0A2P5FVS3|A0A2P5FVS3_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021930 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.5e-123
Identity = 255/403 (63.28%), Postives = 297/403 (73.70%), Query Frame = 0


Query: 1   MPVAPQT-STIGEHINLRRPRSHFSQPISESDPNP-SIPSIIQSTRCKSTISSLLLSTF- 60
           MPV  +T ST+ EH+ LRRPRS F Q ISE+DPNP  IPSIIQSTRCKSTISSLLLSTF 
Sbjct: 1   MPVLAETSSTMAEHMKLRRPRSQFGQLISETDPNPHEIPSIIQSTRCKSTISSLLLSTFS 60

Query: 61  SNNSTTGANECLPSSIATNRKKNNFSSATFRGLGCTNAASQQVSVPAVIRTSADWEKKKT 120
           SNNS    NE +P +I   +KKNNFSS+T RGLGCT  +SQQVSVPAVIR+SADW+ KK 
Sbjct: 61  SNNSNNAPNEAMPINIHNPKKKNNFSSSTLRGLGCTAGSSQQVSVPAVIRSSADWQGKKV 120

Query: 121 R------------------XXXXXXXKNKTHQGIVDASHFHPNSSINSASCLDAQDVWCG 180
           R                  XXXXXXX++  HQG+VD S        NSASC+D QDVWCG
Sbjct: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXRSALHQGLVDGS--------NSASCVDFQDVWCG 180

Query: 181 PGIEFAADAAASVDCVVARRHASGRGKIDLDKI-----NQRERSSLGGRRTVNPETLLYL 240
           PGI F+ADAAASVDCVVARR+ +GRGKID DK+       RERS L  RRTV PE   + 
Sbjct: 181 PGIGFSADAAASVDCVVARRNVTGRGKIDGDKMTSHRDRDRERSCL-ARRTVTPEPPSFF 240

Query: 241 DSDSDLPTART-FELSRSRYYRHVRHPSPDGLAEIMMFQSGLLMGGRFDIHDQFRELRLD 300
           D+D D  + R   E+  +RY+RHVRHPSP+GLAEIMM  SGLLMGGR DIHD+FR+LRLD
Sbjct: 241 DTDPDFLSERPGSEVFGARYFRHVRHPSPEGLAEIMMLHSGLLMGGRVDIHDRFRDLRLD 300

Query: 301 VDNMSYEELLELGERIGHVSTGLKEDEMGRCIRTMKPLAVNELTTTHLLSQMDRKCSICQ 360
           VDNMSYEELL+LGERIG+V+TGLKEDE+GRCIR +K    NE   + L +Q DRKCSICQ
Sbjct: 301 VDNMSYEELLDLGERIGYVNTGLKEDEIGRCIRKIKLSISNE--WSRLSTQADRKCSICQ 360

Query: 361 EEYDPDDEMGKLECGHGYHVECIKQWLAQKNACPVCKTAPVGR 377
           EE++ DD++GKL CGHG+H ECI+ WL+ KN CPVCK   V R
Sbjct: 361 EEFEADDDLGKLNCGHGFHTECIRHWLSHKNTCPVCKAEAVSR 392

The following BLAST results are available for this feature:

BLAST of Carg04830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924069.1	3.2e-210	99.47	uncharacterized protein LOC111431610 isoform X4 [Cucurbita moschata]	[more]
XP_022924067.1	7.8e-209	99.21	uncharacterized protein LOC111431610 isoform X2 [Cucurbita moschata]	[more]
XP_022924068.1	7.8e-209	99.21	uncharacterized protein LOC111431610 isoform X3 [Cucurbita moschata]	[more]
XP_023000964.1	1.3e-208	98.67	uncharacterized protein LOC111495245 isoform X4 [Cucurbita maxima]	[more]
XP_023519761.1	5.0e-208	98.67	uncharacterized protein LOC111783108 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg04830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73760.1	5.0e-77	46.09	RING/U-box superfamily protein	[more]
AT1G17970.1	1.3e-56	39.11	RING/U-box superfamily protein	[more]
AT4G31450.1	4.0e-34	50.78	RING/U-box superfamily protein	[more]
AT1G45180.1	3.8e-32	45.59	RING/U-box superfamily protein	[more]
AT5G10650.1	7.1e-31	43.38	RING/U-box superfamily protein	[more]

BLAST of Carg04830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZQF9\|MBR1_ARATH	8.3e-29	45.83	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV...	[more]
sp\|Q7XTV7\|HIP1_ORYSJ	1.6e-27	50.44	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|O49500\|MBR2_ARATH	6.0e-27	50.00	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV...	[more]
sp\|Q9FMM4\|RHG1A_ARATH	1.0e-26	46.09	Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|Q5QLR5\|ZFP1_ORYSJ	1.7e-21	43.22	Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Carg04830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CET5\|A0A1S3CET5_CUCME	2.7e-165	80.05	E3 ubiquitin-protein ligase MBR2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
tr\|A0A1S3CER0\|A0A1S3CER0_CUCME	6.6e-164	79.84	E3 ubiquitin-protein ligase MBR2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
tr\|A0A0A0LQF5\|A0A0A0LQF5_CUCSA	6.8e-161	80.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042600 PE=4 SV=1	[more]
tr\|A0A1S3CEY2\|A0A1S3CEY2_CUCME	1.5e-160	80.76	E3 ubiquitin-protein ligase MBR2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
tr\|A0A2P5FVS3\|A0A2P5FVS3_9ROSA	1.5e-123	63.28	43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021930 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04830-RA	Carg04830-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 329..369 e-value: 1.0E-7 score: 41.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 328..370 e-value: 2.5E-13 score: 50.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 329..370 score: 12.534
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 305..374 e-value: 8.0E-18 score: 65.4
None	No IPR available	PANTHER	PTHR22937	RING FINGER CONTAINING PROTEIN	coord: 11..374
None	No IPR available	PANTHER	PTHR22937:SF96	F6A14.12 PROTEIN-RELATED	coord: 11..374
None	No IPR available	CDD	cd16481	RING-H2_TTC3	coord: 328..370 e-value: 1.05585E-15 score: 69.6833
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 315..371

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04830	Cla018476	Watermelon (97103) v1	carwmB0387
Carg04830	Csa1G042600	Cucumber (Chinese Long) v2	carcuB0415
Carg04830	MELO3C002110	Melon (DHL92) v3.5.1	carmeB0393
Carg04830	ClCG04G010890	Watermelon (Charleston Gray)	carwcgB0383
Carg04830	CSPI01G07000	Wild cucumber (PI 183967)	carcpiB0418
Carg04830	Cucsa.121730	Cucumber (Gy14) v1	carcgyB0452
Carg04830	CmaCh18G000520	Cucurbita maxima (Rimu)	carcmaB0541
Carg04830	CmaCh13G010070	Cucurbita maxima (Rimu)	carcmaB0540
Carg04830	CmoCh18G000420	Cucurbita moschata (Rifu)	carcmoB0527
Carg04830	CmoCh13G010450	Cucurbita moschata (Rifu)	carcmoB0526
Carg04830	Lsi02G002120	Bottle gourd (USVL1VR-Ls)	carlsiB353
Carg04830	Cp4.1LG09g11340	Cucurbita pepo (Zucchini)	carcpeB0539
Carg04830	Cp4.1LG20g01260	Cucurbita pepo (Zucchini)	carcpeB0544
Carg04830	CsGy1G006820	Cucumber (Gy14) v2	carcgybB0393
Carg04830	MELO3C002110.2	Melon (DHL92) v3.6.1	carmedB0397
Carg04830	CsaV3_1G006940	Cucumber (Chinese Long) v3	carcucB0418
Carg04830	Cla97C04G077700	Watermelon (97103) v2	carwmbB0409
Carg04830	Bhi08G001053	Wax gourd	carwgoB0473

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04830	Carg22741	Silver-seed gourd	carcarB413

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04830	Cucumber (Chinese Long) v3	carcucB0419
Carg04830	Bottle gourd (USVL1VR-Ls)	carlsiB359
Carg04830	Melon (DHL92) v3.5.1	carmeB0396
Carg04830	Melon (DHL92) v3.6.1	carmedB0400
Carg04830	Watermelon (Charleston Gray)	carwcgB0388
Carg04830	Watermelon (97103) v1	carwmB0391
Carg04830	Watermelon (97103) v2	carwmbB0415
Carg04830	Silver-seed gourd	carcarB416
Carg04830	Silver-seed gourd	carcarB418
Carg04830	Cucumber (Gy14) v2	carcgybB0394
Carg04830	Cucumber (Gy14) v1	carcgyB0449
Carg04830	Cucurbita maxima (Rimu)	carcmaB0538
Carg04830	Cucurbita moschata (Rifu)	carcmoB0524
Carg04830	Cucurbita pepo (Zucchini)	carcpeB0548
Carg04830	Wild cucumber (PI 183967)	carcpiB0419
Carg04830	Cucumber (Chinese Long) v2	carcuB0416