CSPI01G07000 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATAAAGAGTTTTAAAATATTTTTTTTAGAAAAAGAAAAAAAAGGAAAAAGAGAGAAAAGGTTGTTCACAGATTCCTGAGTCTGTGAGACTCTGCTATGTGTATGATGGCACATAACCCACAAACTCTAACAAGAAGACAAACAGAGCCCACCTAACAAACAGCACAAGAAAGGAGGAGAGGAAAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAAAATCGCTTCATAATCACTCCTTTTTTTTTTTTGGTTTTTTTCTTGTTTTTCTTCTTCCAATTCCTCTTCATTCAAATCTGGTAATGGAACAACAAAAAAGTTTGATTTAACTAAAGTTTATTAAAGTTTTATGCTTTTCTCTCTTTCAACTCAATTTCACTCCTACTCTATTCCCTTTGTTTCACTTTCTCTTCTAAAAGCCTTTGTTTTTTGTTTATTTCTTCCATTCATTTCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTTCAGTTTCGTGCTTACATTCTAATCCTTGTTCAACAATCATGCCTGTAGTTACAGTTGGTGAACACATGAAATTGAGAAGACCCAGAAGCGATTTGAGCCATTTGAACCAACCCATTTCAGAATCAGATCCGAACCCATCAATCCCTTCTATAATTCAATCCACTCGTTGCAAATCCACCATTTCTTCTCTTCTTCTCTCTACTTTTTCCAATAATACAACTAGTGGCCCCAATGAGTCTTTACCCTCTTCCATTATCACCACCAATAGGAAGAAGAACAATTTCTCTTCTGCAACTCTCCGGGGTCTCGGTTGTACAACCGCCGCTTCTCAACAAGTATCTGTTCCGGCTGTAATTCGAACTTCAGCGGACTGGGAGAAGAAGAAGACAAGGAAAAAAAAGCAGAAGAGCTCTAAGAACAAGACCCAACAAGGAATTGTTGATGCTTCTCATTTTCAACCTAATTCGAGTATGAACTCTGCTAGCTGTTTAGACGCCCAGGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTGCAGATGCGGCTGCTTCTGTGGATTGTGTTGTTGCTAGAAGACATGCTTCTGGAAGAGGAAAAATCGATTTGGAGAAGATTAATCAGAGGGAGGTACTCACTCCTCTTTGTCCTATTTTGTTCTGAATTTATATTTTGAATTTCTTTCTTCAGTGTCGATGTGTCCTTCTGTTGTTGTTATTGTTAAGCATTCGTGTCGATTCCTTAGTTAAAGAAGAATTTGGATGTTTATTTTATTTCGGCTTTTGTCATTTTATTATCCAGATGTGGGTTTCTTCTGGGTTTTTTTAATCGAACTTTATAGTCTCCGTTTTTTTAAAAAAAAATTTTCAATAGGTTTCTTCTAATTCAGTTTTACCCTGTTCGACTTCCATTCTTGGAACTTGTTTGATTTCATTCTTCTTCGTAAATTCGAGTAATTAATGCAAATGGGTATGGATTAGATTCGATTCTTTGGGGCTATAAAAATGAGAAATCACTTGTTCATCGTTGAGTATCGATAACAAACTCTGTTTAATGTGTTTTAACTTCCTCTGCTTTTTCTATTTCAGCGTTCTTGTTTAGGAAGACGAACAGTGAGCCCCGAGACCCTCTTATTTTTGGATTCTGATTCTGAAATTCCAACTGCTCGATCATTGGAACTATCTAGGAGTCGGTATTATCGCCACGTTCGTCATCCATCCCCTGATGGCCTTGCTGAGGTGAGCCATCTTTCGTATTTTTATTCAGTTTCATAAATATAAGTTTCTGTTGAAACCAATTAGTTGATTCTACAACTCTGCCCCTGAGTTCTAAAAATATATGATTCAGTTGAGTTCTTTGTTCGTTGTGTTAATCTTCTCATTCTCTCCCTTAATGGTCGTCTCCTTTTCACATTATGGTGTTCTTTTTATACAGTACTGAATAGAATCTCTGTTTCACAATGTTCAAACGATATTGATTTGCTCATTTGATATTACAATTACGTTATCTAGCAGATTATGATGTTTCAGAGCAGTTTGCTAATGGGTGGAAGGTTCGATCTACACGACCAATTTAGAGAATTACGACTTGATGTTGATAACATGTCGTATGAGGTTAGCATCTTTCTCCAGTTTCTCCTTTTTGACACGATGTGATTACTAACACCTTATTTCCTAATGGAAACAGGAGCTGCTTGAACTCGGGGAAAGGATTGGACATGTCAGTACCGGATTGAAAGATGATGAGATAGGAAGATGTATTAGAAAAATGAAACCCCATGTAGTGAATGAGCTAACAACTCATTTACTGTCTCAAATGGATAGGAAATGCAGCATCTGTCAGGTGAAGTAGAAAGAGTTCAGTTTTGCTGGCTCTGATTGGCATTTGTATGTGTAATCACATTGTTAACATCTTCAATGATTTTGTACAATACAGGAGGACTATGAGCCAGATGATGAAATGGGTAAGCTGGAATGTGGGCACAGCTACCATATACACTGTATAAAACAGTGGCTTGCACAGAAGAATACGTGTCCGGTGTGTAAGACAGCAGCAGTGGGCCGAGGTTGAACGGTTAGTCCATCACGTCTAGCAGTTCTTCGACTCTGTCTGCTTGCTTTCTCCCCTATGTGGTGTATAGATTTCATTGCCTTTTTACATGAGCAAAAGCATTCGTTCATTTGTGTGAAGCTTCCCTATCTGCTTATTTAGATATGATGGGCGCCATTTTCTTGTTCTTCAGTTTTCTAAACATTTCATGTGATGGTGATTTTGGATCGCGACTTGATTGCATAGCTTTAAGACCTCAAAGTACAATGTCTTTCTTGTGTTCCCCAAGAATTTCCGTCGGGGTACCCAAAAACAAGGAAAAAGGAAAAAAAAGAAAAAAAGAAAAAAGAAAAAAAAGAAAGCTCCTATTCAACTTATGAGCATGTAAAAATGTTGTAATCTGCTTTCATTGTGGCACAGCTCTGCCTCTAGTGATTGAGTTAATGGTTGAAATCAAATGATAATTTGCAAAAACTTATTTATGATTGCTTCCTTTTTTAATAGCTCATAATTCAATTTCTTGGGTTTTTGGATGAACTGCACTCTTGTGTTTTGTTGAATTGAGTTGGGTAGTTGTACACTGATTGATTCCACAGACTGGAGAATTTTTCCAGAAGTTGTTATAAATGATTCCGTTCCAAATTAGATAACCTAGAACTTCCCTAGCCAATAATTCGCTTCATATATTCTTCACAGGGTTGTATATTGGTCATACAATTGTGTATATACAGTGAGAAATCTTCGTATACTTTATCATGGAAGATACACTACTGTTCCTTATTTCAACTGGTGGGATGTATATATCTAAAGGAGCTGAATGGTATGGTAAAATCAAACCATGTCATGGCGGTTAAGAAAATCAGCTACCAACGGATATACTTCACTTGATGCCTGCATCCCATGACATTGAATACAAAGAGGTTAGAGAAATTATAGATCAAGGTAGCTTAAAAAACTGGCTGTGAATGAGAAAAATCTGTACCAGACGGCTTCCCACAATATCATAGTGAGCATAGTGAGGTCCACCAGGCTTGCCAAGAACTTTGTAGGAAACTAACTGCCTAGGAATTTCTTTCACAGTTTCTGATCAATGTTAAAAAGGATTGGGAAGAGAGTCAATGTGGGTGATGAATAGAGTCAGAGAGAAGCCATGGTGAGGGCACTCAGGTATTGTAGTAGAAATCCTACCATATACCGCTTCAGGTGGACAAATAAGGTCTTGGTCTCCAGCAAGAGCAAGGATTGGAACATTGCCTTGGCGTAGATGATCCTTGTACTGGAATGTACCATTCCTGTCACGTAAGCCCCCCTTTTCAAACACGGAAGATAGCTGCAAGAGAACCTTTGCAGGCACAGATCCTGAAAATTATATTATCAATCATGTCAACAAGTGTAGAGTTCCATAATGCTGAAATGAAACTGTCATTAGTAAGTTTTTCATTGACAAACAAAAGGAGAAGTATTTAACCAAAGCCATTCAACACAAGCTTCTCAAGCAAGGTGGGATGTAACATGTCTTCCACAGATACTTGGTCCTTTAACCAAGCCAAAACATAAGGAGGACGTGATGCAAGAGGATGAGCAATAACAAGCAATGGCCCGATGGGAAACACTGGAACATTAAAATTTTGTGCAGGATCTTTCTGTACATTTAAGATGGATTTGCCATTAGTTTCTCAATCTAGTACATGTGGTTAGCCAAATTGCGGAAGAAATCATCTGAAAATGCTTGTACAATCACTTGCCAAAGGTAAAAGAAGTCTGAGTGATGAATTTGATGGTCTGTAGTCAAGTGAAGAAGCCAAAGTAACAACTGATGCTAACTGCGGATCAACTTTCTTAAAGCCTGAAAAAGAATAGTAACAGTCAAGAAAGGTCCATTATAAAGAGCCCAACGTTCTGAATGATTGGTCTTTAAGATTATCGAAGTAGTTAGAACATTATGAAAGATAATAGGAAGGCATGTCAAACTCACTACAGCGAGAGATCATGGCATATAGCAAGATACCCCCCATCGAGTGGCCGATCGCTAGCAACTTGCCATCATTTGGTTTGGATTGATTCCTTATGTACTCCATCTAAAATGAAACATCACATCCATGTTCATCATTAAAGTTTCTCATTTGACGGTGTGGTGGAAGAAGTACTATTTTCACCCATGCATGAAAAAACCCATGAAAAAGCACCTCACCGCAGCAGGCACGTCTTCTTCCAAGTAGTGGTCGAAGTCCCAATCGTACTTCTCATACACATCAAGTTGTTCCTGGAACTCTTCTAATGCAGAGGTAACACCTTGTACAAAAGGCTGGAATGGACCCAATTGTTGAGCTCCGTCAATTATATTGATAAGATTCTTATTCCATTGCCCAAGTTGAGTAGCAATGTTAGAAGTCTGTCCTGTAACAAATTTTAAAAAAATTAAAGAAATGAAAGCTAAAGTTCTTACATCTCCCAATACCTGAAGTTAATACTATAGATCTCGGAATGCAGTTAGGAAAATGAAAGAATTTTTAACACACCATCTCTAGAAGAGACATTGGAACCCTCAGAATTTTCATATACACTGGCCTTGACTAATGGCTGCTTTTTCAGTGTTTCAGATTCTATCTTCTCAGTTGTGCTAAGTCCCAATCCTCGAACTTCAAGAATCCATGTGTCATATCCTTGGTTGGACATGTAGCGAGCAAATGAGGACTGAAAATATTACATTG ATGCCTGTAGTTACAGTTGGTGAACACATGAAATTGAGAAGACCCAGAAGCGATTTGAGCCATTTGAACCAACCCATTTCAGAATCAGATCCGAACCCATCAATCCCTTCTATAATTCAATCCACTCGTTGCAAATCCACCATTTCTTCTCTTCTTCTCTCTACTTTTTCCAATAATACAACTAGTGGCCCCAATGAGTCTTTACCCTCTTCCATTATCACCACCAATAGGAAGAAGAACAATTTCTCTTCTGCAACTCTCCGGGGTCTCGGTTGTACAACCGCCGCTTCTCAACAAGTATCTGTTCCGGCTGTAATTCGAACTTCAGCGGACTGGGAGAAGAAGAAGACAAGGAAAAAAAAGCAGAAGAGCTCTAAGAACAAGACCCAACAAGGAATTGTTGATGCTTCTCATTTTCAACCTAATTCGAGTATGAACTCTGCTAGCTGTTTAGACGCCCAGGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTGCAGATGCGGCTGCTTCTGTGGATTGTGTTGTTGCTAGAAGACATGCTTCTGGAAGAGGAAAAATCGATTTGGAGAAGATTAATCAGAGGGAGCGTTCTTGTTTAGGAAGACGAACAGTGAGCCCCGAGACCCTCTTATTTTTGGATTCTGATTCTGAAATTCCAACTGCTCGATCATTGGAACTATCTAGGAGTCGGTATTATCGCCACGTTCGTCATCCATCCCCTGATGGCCTTGCTGAGATTATGATGTTTCAGAGCAGTTTGCTAATGGGTGGAAGGTTCGATCTACACGACCAATTTAGAGAATTACGACTTGATGTTGATAACATGTCGTATGAGGAGCTGCTTGAACTCGGGGAAAGGATTGGACATGTCAGTACCGGATTGAAAGATGATGAGATAGGAAGATGTATTAGAAAAATGAAACCCCATGTAGTGAATGAGCTAACAACTCATTTACTGTCTCAAATGGATAGGAAATGCAGCATCTGTCAGGAGGACTATGAGCCAGATGATGAAATGGGTAAGCTGGAATGTGGGCACAGCTACCATATACACTGTATAAAACAGTGGCTTGCACAGAAGAATACGTGTCCGGTGTGTAAGACAGCAGCAGTGGGCCGAGGTTGA ATGCCTGTAGTTACAGTTGGTGAACACATGAAATTGAGAAGACCCAGAAGCGATTTGAGCCATTTGAACCAACCCATTTCAGAATCAGATCCGAACCCATCAATCCCTTCTATAATTCAATCCACTCGTTGCAAATCCACCATTTCTTCTCTTCTTCTCTCTACTTTTTCCAATAATACAACTAGTGGCCCCAATGAGTCTTTACCCTCTTCCATTATCACCACCAATAGGAAGAAGAACAATTTCTCTTCTGCAACTCTCCGGGGTCTCGGTTGTACAACCGCCGCTTCTCAACAAGTATCTGTTCCGGCTGTAATTCGAACTTCAGCGGACTGGGAGAAGAAGAAGACAAGGAAAAAAAAGCAGAAGAGCTCTAAGAACAAGACCCAACAAGGAATTGTTGATGCTTCTCATTTTCAACCTAATTCGAGTATGAACTCTGCTAGCTGTTTAGACGCCCAGGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTGCAGATGCGGCTGCTTCTGTGGATTGTGTTGTTGCTAGAAGACATGCTTCTGGAAGAGGAAAAATCGATTTGGAGAAGATTAATCAGAGGGAGCGTTCTTGTTTAGGAAGACGAACAGTGAGCCCCGAGACCCTCTTATTTTTGGATTCTGATTCTGAAATTCCAACTGCTCGATCATTGGAACTATCTAGGAGTCGGTATTATCGCCACGTTCGTCATCCATCCCCTGATGGCCTTGCTGAGATTATGATGTTTCAGAGCAGTTTGCTAATGGGTGGAAGGTTCGATCTACACGACCAATTTAGAGAATTACGACTTGATGTTGATAACATGTCGTATGAGGAGCTGCTTGAACTCGGGGAAAGGATTGGACATGTCAGTACCGGATTGAAAGATGATGAGATAGGAAGATGTATTAGAAAAATGAAACCCCATGTAGTGAATGAGCTAACAACTCATTTACTGTCTCAAATGGATAGGAAATGCAGCATCTGTCAGGAGGACTATGAGCCAGATGATGAAATGGGTAAGCTGGAATGTGGGCACAGCTACCATATACACTGTATAAAACAGTGGCTTGCACAGAAGAATACGTGTCCGGTGTGTAAGACAGCAGCAGTGGGCCGAGGTTGA
BLAST of CSPI01G07000 vs. Swiss-Prot
Match: MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.3e-30 Identity = 68/150 (45.33%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of CSPI01G07000 vs. Swiss-Prot
Match: HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP1 PE=1 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 2.4e-28 Identity = 58/122 (47.54%), Postives = 85/122 (69.67%), Query Frame = 1
BLAST of CSPI01G07000 vs. Swiss-Prot
Match: MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.1e-28 Identity = 80/215 (37.21%), Postives = 111/215 (51.63%), Query Frame = 1
BLAST of CSPI01G07000 vs. Swiss-Prot
Match: RHG1A_ARATH (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana GN=RHG1A PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.2e-27 Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 1
BLAST of CSPI01G07000 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.2e-13 Identity = 40/97 (41.24%), Postives = 50/97 (51.55%), Query Frame = 1
BLAST of CSPI01G07000 vs. TrEMBL
Match: A0A0A0LQF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042600 PE=4 SV=1) HSP 1 Score: 745.3 bits (1923), Expect = 3.5e-212 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 1
BLAST of CSPI01G07000 vs. TrEMBL
Match: M5WUI3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007205mg PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 1.5e-122 Identity = 247/396 (62.37%), Postives = 297/396 (75.00%), Query Frame = 1
BLAST of CSPI01G07000 vs. TrEMBL
Match: A0A0L9TIN5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1091s001400 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 6.6e-118 Identity = 241/389 (61.95%), Postives = 285/389 (73.26%), Query Frame = 1
BLAST of CSPI01G07000 vs. TrEMBL
Match: A0A0S3QWN0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G010400 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 6.6e-118 Identity = 241/389 (61.95%), Postives = 285/389 (73.26%), Query Frame = 1
BLAST of CSPI01G07000 vs. TrEMBL
Match: V7CT75_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G325200g PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 8.6e-118 Identity = 242/389 (62.21%), Postives = 286/389 (73.52%), Query Frame = 1
BLAST of CSPI01G07000 vs. TAIR10
Match: AT1G73760.1 (AT1G73760.1 RING/U-box superfamily protein) HSP 1 Score: 288.5 bits (737), Expect = 5.9e-78 Identity = 178/385 (46.23%), Postives = 235/385 (61.04%), Query Frame = 1
BLAST of CSPI01G07000 vs. TAIR10
Match: AT1G17970.1 (AT1G17970.1 RING/U-box superfamily protein) HSP 1 Score: 251.5 bits (641), Expect = 8.0e-67 Identity = 158/387 (40.83%), Postives = 226/387 (58.40%), Query Frame = 1
BLAST of CSPI01G07000 vs. TAIR10
Match: AT1G45180.1 (AT1G45180.1 RING/U-box superfamily protein) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-32 Identity = 61/138 (44.20%), Postives = 92/138 (66.67%), Query Frame = 1
BLAST of CSPI01G07000 vs. TAIR10
Match: AT4G31450.1 (AT4G31450.1 RING/U-box superfamily protein) HSP 1 Score: 132.9 bits (333), Expect = 4.2e-31 Identity = 61/131 (46.56%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of CSPI01G07000 vs. TAIR10
Match: AT5G10650.1 (AT5G10650.1 RING/U-box superfamily protein) HSP 1 Score: 130.2 bits (326), Expect = 2.7e-30 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 1
BLAST of CSPI01G07000 vs. NCBI nr
Match: gi|449439429|ref|XP_004137488.1| (PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X2 [Cucumis sativus]) HSP 1 Score: 745.3 bits (1923), Expect = 5.0e-212 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 1
BLAST of CSPI01G07000 vs. NCBI nr
Match: gi|778657300|ref|XP_011650643.1| (PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X1 [Cucumis sativus]) HSP 1 Score: 740.7 bits (1911), Expect = 1.2e-210 Identity = 375/376 (99.73%), Postives = 375/376 (99.73%), Query Frame = 1
BLAST of CSPI01G07000 vs. NCBI nr
Match: gi|659066790|ref|XP_008461518.1| (PREDICTED: uncharacterized protein LOC103500009 isoform X2 [Cucumis melo]) HSP 1 Score: 723.8 bits (1867), Expect = 1.6e-205 Identity = 364/375 (97.07%), Postives = 370/375 (98.67%), Query Frame = 1
BLAST of CSPI01G07000 vs. NCBI nr
Match: gi|778657304|ref|XP_011650652.1| (PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X3 [Cucumis sativus]) HSP 1 Score: 721.8 bits (1862), Expect = 6.0e-205 Identity = 366/367 (99.73%), Postives = 366/367 (99.73%), Query Frame = 1
BLAST of CSPI01G07000 vs. NCBI nr
Match: gi|659066788|ref|XP_008461442.1| (PREDICTED: uncharacterized protein LOC103500009 isoform X1 [Cucumis melo]) HSP 1 Score: 719.2 bits (1855), Expect = 3.9e-204 Identity = 364/376 (96.81%), Postives = 370/376 (98.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|