CmoCh17G000060 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G000060
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TCP family transcription factor
Location	Cmo_Chr17 : 41969 .. 43006 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCACAAACAAGACCTCGACGACCACCACCACTCTCCGCCCACCCATCTCTCTATCAATAACTCCGACTCCTCTCCAATGAACCTTCTTCCCCTTGCTCCCAAGCGGGAGCATCCCGACAACGACCACGAAACTCAGGTCGTCAAGTTCACGGCAGAGATACCTAAAACGGTCTCGTCTATCCCCCCCAAGAGACCCTCCACCAAGGATCGCCACACCAAGGTCGAGGGCCGAGGCCGGAGAATCCGAATTCCGGCTACCTGTGCGGCGCGTATCTTCCAATTGACTCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTTCTCGAACGGGCCGAGCCGGCGATCATCGCGGCTACTGGGACTGGTACCGTTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCCACCGATCAATCCGCCAGTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTATGTTGACGTAAATGACGCCGTTTCCGTTTCCGTCTCCGCCTCCGCCTCCGCCTCCGCCTCGAACGGCTGTGTTCAGGCCGCTACCGTTGCCGGTTCCCCCGCCGTCCAACAGCCTTTTCCACCGGGGTTTGTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGATTGCTCTTCCACCCGTCCGCAGTTTTTCTCATTCCCGACCCCGGCAGCGCCGCTCATCAACACAACGGCCCGACCCATTTCCACCGTCCCGTCGAAGCTGCACACATCTCACATTCAAGCAAACACCACCAATCAAAGCTCGAGCACTTCAAACTCCTCCGCTTCCAAGTCTGAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTCACGACAAACGGCAAAACTACGAAACAGATGCTCAGAGAATTCTCATTGGAGATATACGATAAGGAAGAGCTTCAATTCATGTCTCGCTCGTCGGAAAGAATGAAGACAGAATAG

mRNA sequence

ATGGCCGATATTCACAAACAAGACCTCGACGACCACCACCACTCTCCGCCCACCCATCTCTCTATCAATAACTCCGACTCCTCTCCAATGAACCTTCTTCCCCTTGCTCCCAAGCGGGAGCATCCCGACAACGACCACGAAACTCAGGTCGTCAAGTTCACGGCAGAGATACCTAAAACGGTCTCGTCTATCCCCCCCAAGAGACCCTCCACCAAGGATCGCCACACCAAGGTCGAGGGCCGAGGCCGGAGAATCCGAATTCCGGCTACCTGTGCGGCGCGTATCTTCCAATTGACTCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTTCTCGAACGGGCCGAGCCGGCGATCATCGCGGCTACTGGGACTGGTACCGTTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCCACCGATCAATCCGCCAGTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTATGTTGACGTAAATGACGCCGTTTCCGTTTCCGTCTCCGCCTCCGCCTCCGCCTCCGCCTCGAACGGCTGTGTTCAGGCCGCTACCGTTGCCGGTTCCCCCGCCGTCCAACAGCCTTTTCCACCGGGGTTTGTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGATTGCTCTTCCACCCGTCCGCAGTTTTTCTCATTCCCGACCCCGGCAGCGCCGCTCATCAACACAACGGCCCGACCCATTTCCACCGTCCCGTCGAAGCTGCACACATCTCACATTCAAGCAAACACCACCAATCAAAGCTCGAGCACTTCAAACTCCTCCGCTTCCAAGTCTGAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTCACGACAAACGGCAAAACTACGAAACAGATGCTCAGAGAATTCTCATTGGAGATATACGATAAGGAAGAGCTTCAATTCATGTCTCGCTCGTCGGAAAGAATGAAGACAGAATAG

Coding sequence (CDS)

ATGGCCGATATTCACAAACAAGACCTCGACGACCACCACCACTCTCCGCCCACCCATCTCTCTATCAATAACTCCGACTCCTCTCCAATGAACCTTCTTCCCCTTGCTCCCAAGCGGGAGCATCCCGACAACGACCACGAAACTCAGGTCGTCAAGTTCACGGCAGAGATACCTAAAACGGTCTCGTCTATCCCCCCCAAGAGACCCTCCACCAAGGATCGCCACACCAAGGTCGAGGGCCGAGGCCGGAGAATCCGAATTCCGGCTACCTGTGCGGCGCGTATCTTCCAATTGACTCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTTCTCGAACGGGCCGAGCCGGCGATCATCGCGGCTACTGGGACTGGTACCGTTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCCACCGATCAATCCGCCAGTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTATGTTGACGTAAATGACGCCGTTTCCGTTTCCGTCTCCGCCTCCGCCTCCGCCTCCGCCTCGAACGGCTGTGTTCAGGCCGCTACCGTTGCCGGTTCCCCCGCCGTCCAACAGCCTTTTCCACCGGGGTTTGTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGATTGCTCTTCCACCCGTCCGCAGTTTTTCTCATTCCCGACCCCGGCAGCGCCGCTCATCAACACAACGGCCCGACCCATTTCCACCGTCCCGTCGAAGCTGCACACATCTCACATTCAAGCAAACACCACCAATCAAAGCTCGAGCACTTCAAACTCCTCCGCTTCCAAGTCTGAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTCACGACAAACGGCAAAACTACGAAACAGATGCTCAGAGAATTCTCATTGGAGATATACGATAAGGAAGAGCTTCAATTCATGTCTCGCTCGTCGGAAAGAATGAAGACAGAATAG

Homology

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BLAST of CmoCh17G000060 vs. Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-64
Identity = 166/303 (54.79%), Postives = 200/303 (66.01%), Query Frame = 1


Query: 58  PKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLER 117
           P + +  P KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE 
Sbjct: 62  PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEN 121

Query: 118 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYVDVN 177
           AEPAIIAATGTGTVPAIAMSVNGTLKIPTTT++ +     ++  KK+RKRP+NS+Y+D++
Sbjct: 122 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSD--MGENLMKKKRKRPSNSEYIDIS 181

Query: 178 DAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIP--GAVFMV 237
           DAVS S S  A  + +        +A S   QQ  P G  P+WAIPSNA+IP  GA F++
Sbjct: 182 DAVSAS-SGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLI 241

Query: 238 PSVDCSSTRPQFFSFPTPAA---------PLINTTAR--PISTVPSKLHTSHIQANTTNQ 297
           P +   S +PQ  +FP  AA            +T AR  P+  VPS    S         
Sbjct: 242 PQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVS--------- 301

Query: 298 SSSTSNSSASKSESVMAPISSSTVTTNGK-----TTKQMLREFSLEIYDKEEL-QFMSRS 342
            S  S S+ S++ SVMAP SSS VTT        TT   LR+FSLEIY+K+EL QFMS +
Sbjct: 302 VSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTT 352

[Close]

BLAST of CmoCh17G000060 vs. Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.2e-48
Identity = 140/277 (50.54%), Postives = 166/277 (59.93%), Query Frame = 1


Query: 66  PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAA 125
           PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII A
Sbjct: 52  PKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEA 111

Query: 126 TGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSAS--KKRRKRPANSDYVDVNDAVSVS 185
           TGTGTVPAIA+SVNGTLKIPT++   N    D      KKRRKR   SD+VDVND+   S
Sbjct: 112 TGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSS 171

Query: 186 VSAS-ASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDCSS 245
           V++  A  +ASN  V    V            GFVP W +       G  F+    D   
Sbjct: 172 VTSGLAPITASNYGVNILNVNTQ---------GFVPFWPMGM-----GTAFVTGGPDQMG 231

Query: 246 TRPQFFSFPTPA-APLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVMA 305
              Q ++ PT A AP +N  ARP+S                   S  SN+S +++E    
Sbjct: 232 ---QMWAIPTVATAPFLNVGARPVS-------------------SYVSNASDAEAE---- 282

Query: 306 PISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRS 339
                 + T+G  T Q LR+FSLEIYDK ELQF+  S
Sbjct: 292 ------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 282

[Close]

BLAST of CmoCh17G000060 vs. Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-29
Identity = 110/266 (41.35%), Postives = 149/266 (56.02%), Query Frame = 1


Query: 65  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 124
           PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PP--PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 125 ATGTGTVPAIAMSVNGTLKIPTTTSSSN-------QDSTDQSASKKRRKRPANSDYVDVN 184
           ATGTGTVPAIA +V+G L+IPT +SSS+        D  + SA ++R+ +P  +      
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRA------ 190

Query: 185 DAVSVSVSASASASASNGCVQAATVAGS--PAVQQP----------FPPGFVPVWAIPS- 244
                S  A+A+ +A    +    + GS   A+  P           P G VPV+A+P+ 
Sbjct: 191 -VAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPAT 250

Query: 245 --------NAIIP--GAVFMVP----SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPS 297
                   N +IP   AV+MVP    +    +   QF++  + A  L+N      +  P+
Sbjct: 251 GSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQS-APQLVNFAG---AQFPT 310

[Close]

BLAST of CmoCh17G000060 vs. Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-29
Identity = 110/266 (41.35%), Postives = 149/266 (56.02%), Query Frame = 1


Query: 65  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 124
           PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PP--PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 125 ATGTGTVPAIAMSVNGTLKIPTTTSSSN-------QDSTDQSASKKRRKRPANSDYVDVN 184
           ATGTGTVPAIA +V+G L+IPT +SSS+        D  + SA ++R+ +P  +      
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRA------ 190

Query: 185 DAVSVSVSASASASASNGCVQAATVAGS--PAVQQP----------FPPGFVPVWAIPS- 244
                S  A+A+ +A    +    + GS   A+  P           P G VPV+A+P+ 
Sbjct: 191 -VAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPAT 250

Query: 245 --------NAIIP--GAVFMVP----SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPS 297
                   N +IP   AV+MVP    +    +   QF++  + A  L+N      +  P+
Sbjct: 251 GSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQS-APQLVNFAG---AQFPT 310

[Close]

BLAST of CmoCh17G000060 vs. Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 1


Query: 62  SSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA 121
           + + PKR S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+
Sbjct: 69  NQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPS 128

Query: 122 IIAATGTGTVPAIAMS 138
           IIAATG+GT+PA A++
Sbjct: 129 IIAATGSGTIPASALA 144

[Close]

BLAST of CmoCh17G000060 vs. TrEMBL
Match: A0A0A0KCU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G075180 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.0e-133
Identity = 271/341 (79.47%), Postives = 292/341 (85.63%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKT 60
           MAD  KQ+LDD   SPPTHL IN+SDSS M+LLPL PK+EHPD++    ++ F  +IPKT
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHDLLTFNPDIPKT 60

Query: 61  VSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP 120
           +SS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP
Sbjct: 61  LSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP 120

Query: 121 AIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYVDVNDAV 180
           AIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA KKRRKRPANSDYVDVNDA+
Sbjct: 121 AIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYVDVNDAL 180

Query: 181 SVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDC 240
           SVS+SAS              VAGS AVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV C
Sbjct: 181 SVSISAS-------------NVAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVM 300
           SSTRPQ FSF TPAAPLINTTARPIS  PSK  TSHIQ++ TNQSSSTS+SSASKS+SVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSER 342
           APISSS    +GKTT QMLR+FSLEIYDKEELQFMS SS +
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSK 324

[Close]

BLAST of CmoCh17G000060 vs. TrEMBL
Match: A0A0D2SH07_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G094200 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.6e-76
Identity = 192/353 (54.39%), Postives = 227/353 (64.31%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKT 60
           MA IHK ++++        LSIN    +  +  P    +E PD D     +     +P  
Sbjct: 1   MAAIHKLEVEEDADPRAVVLSINGGGDAAPSKNP----KEEPDIDTTLGAMPTAVHVPSG 60

Query: 61  VSSIP-------PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 120
           V   P       PKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW
Sbjct: 61  VPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 120

Query: 121 LLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDY 180
           LLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT   SN +      SKK+ KRPANS+Y
Sbjct: 121 LLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTT---SNANPEPGDPSKKKHKRPANSEY 180

Query: 181 VDVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVF 240
           VD+NDAVSVS   +   +      Q A V          P G VP+WAIPSN ++PGA F
Sbjct: 181 VDINDAVSVSSGLAPVVTPQQQQQQQAAV---------LPQGLVPIWAIPSNTVVPGAFF 240

Query: 241 MVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHT---SHIQANTTNQSSS 300
           MVP   S+   ST+P  F+FP  A P+IN +ARPIS+  S +     S +Q+N    S +
Sbjct: 241 MVPPMASMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVAVTSCT 300

Query: 301 TSNSSASKSESVMAPISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSE 341
              S A+K+ SVMAP SSS  +    TT QMLR+FSLEIYDK+ELQFM+RSS+
Sbjct: 301 VPVSKAAKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRSSK 337

[Close]

BLAST of CmoCh17G000060 vs. TrEMBL
Match: A0A061DVP1_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_005447 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.3e-75
Identity = 201/369 (54.47%), Postives = 234/369 (63.41%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPK- 60
           MA I KQ++++   +    LSIN    +        PK E PD +    V+     +P  
Sbjct: 1   MAAIQKQEVEEDEDTRAVDLSINGGGDAAA-AASKNPKEE-PDTEAAIGVMPMAVHVPSA 60

Query: 61  ------TVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 120
                 T     PKR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRW
Sbjct: 61  IPMPLVTAPPTAPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRW 120

Query: 121 LLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDY 180
           LLE AEPAIIAATGTGTVPAIAMSVNGTLKIP TTS++N +  DQ  SKK+RKRPANS+Y
Sbjct: 121 LLEHAEPAIIAATGTGTVPAIAMSVNGTLKIP-TTSNANPEPGDQ--SKKKRKRPANSEY 180

Query: 181 VDVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPP----GFVPVWAIPSNAIIP 240
           VD+NDAVSVS S  A    S    Q          QQ  PP    G VPVWAIPSNA++P
Sbjct: 181 VDINDAVSVS-SGLAPVITSQRRQQ----------QQQLPPVLPQGLVPVWAIPSNAVVP 240

Query: 241 GAVFMVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLH--------TSHIQ 300
           GA FMVP   SV   ST P  F+FP  A PLIN +ARPIS+  S +            +Q
Sbjct: 241 GAFFMVPPMTSVAGPSTEPHLFTFPATATPLINISARPISSFVSAMQHGVSIAATPGQLQ 300

Query: 301 ANTTNQSSSTSNSSASKSESVMAP-------ISSSTVTTNGKTTKQMLREFSLEIYDKEE 341
           +N    SS+   S   K+ SVMAP       I+SS+ +T   TT QMLR+FSLEIYDK+E
Sbjct: 301 SNVAVTSSTLPVSKTVKTTSVMAPSSSSAATITSSSASTTTTTTTQMLRDFSLEIYDKQE 353

[Close]

BLAST of CmoCh17G000060 vs. TrEMBL
Match: B9IC90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07450g PE=4 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 2.4e-74
Identity = 196/364 (53.85%), Postives = 234/364 (64.29%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSD-----SSPMNL-----LPLAPKREHPDNDHETQ- 60
           +A + KQ+L +        L IN+ +       P N      +  APK E    D     
Sbjct: 49  VAPVQKQELGEDASMTTADLRINSGELRNIRGGPTNKKNYNDMSAAPKEEPCTEDRSPTP 108

Query: 61  ---VVKFTAEIPKTVSSI-PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHK 120
              VV F A IP  ++++ PPKR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHK
Sbjct: 109 PLAVVPFAA-IPMPLTTVTPPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHK 168

Query: 121 SDGETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRR 180
           SDGETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSS +   D+  +KK+R
Sbjct: 169 SDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSAE--PDEPNAKKKR 228

Query: 181 KRPANSDYVDVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQP---FPPGFVPVWAI 240
           KRPANS+YVDVND+VSVS S +   +      Q       P  QQP    P G VP+WAI
Sbjct: 229 KRPANSEYVDVNDSVSVSASLAPITTRPRQPPQ-------PQAQQPVAAVPQGLVPMWAI 288

Query: 241 PSNAIIPGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTT 300
           PSN ++PGA FMVPS+     +PQ F+FP  A+PLIN + RPIS+  S + ++   A   
Sbjct: 289 PSNTVVPGAFFMVPSMPGPFNQPQIFTFPAAASPLINISPRPISSFVSSMQSNIAVA--- 348

Query: 301 NQSSSTSNSSASKSESVMAPISSS-----TVTTNGKTTKQMLREFSLEIYDKEELQFMSR 342
                 S S   K  S  AP SSS     T +T   +T  MLR+FSLEIYDK+ELQFMSR
Sbjct: 349 ---LPVSGSKPGKGISRTAPSSSSAHTIRTPSTTTNSTPHMLRDFSLEIYDKQELQFMSR 396

[Close]

BLAST of CmoCh17G000060 vs. TrEMBL
Match: B9GPT7_POPTR (TCP family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0002s15360g PE=4 SV=2)

HSP 1 Score: 274.2 bits (700), Expect = 2.1e-70
Identity = 189/357 (52.94%), Postives = 223/357 (62.46%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPM----------NLLPLAPKREHPDNDHETQ- 60
           MA + KQ+L +        L IN+ + S +          N + +A K E    +     
Sbjct: 1   MASMQKQELGEDEDMRTVDLRINSRELSNIRARPTNRKDCNDMSVALKEEPSTEERSPTP 60

Query: 61  ---VVKFTAEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKS 120
              V+   A      +  P KRPSTKDRHTKVEGRGRRIR+PA CAARIFQLTRELG+KS
Sbjct: 61  PLGVMPLAAVSVPLTTVTPLKRPSTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGYKS 120

Query: 121 DGETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRK 180
           DGETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIP TT+SS+     Q  + K RK
Sbjct: 121 DGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPITTNSSS--GLGQPNATKNRK 180

Query: 181 RPANSDYVDVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNA 240
           RPANS+YVDVND VSVS S  A  +      Q              P G VP+WAIPSNA
Sbjct: 181 RPANSEYVDVNDTVSVSASL-APVTTQQPQSQPQLPPQPQQTVAAVPQGLVPMWAIPSNA 240

Query: 241 IIPGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSS 300
           ++PGA FMVPS+   S +PQ F+FP  A PLIN +ARPIS+  S + ++   A       
Sbjct: 241 VVPGAFFMVPSIAGPSNQPQIFTFPAAATPLINISARPISSFVSSMQSNMAVA------V 300

Query: 301 STSNSSASKSESVMAPISSS--TVTTNGKTTK---QMLREFSLEIYDKEELQFMSRS 339
             S S  +K  S+MAP SSS  TV+T   TT    QMLR+FSLEIYDK+ELQFMSRS
Sbjct: 301 PVSGSMTAKGISMMAPSSSSACTVSTTSTTTNRTPQMLRDFSLEIYDKQELQFMSRS 348

[Close]

BLAST of CmoCh17G000060 vs. TAIR10
Match: AT2G45680.1 (AT2G45680.1 TCP family transcription factor )

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-65
Identity = 166/303 (54.79%), Postives = 200/303 (66.01%), Query Frame = 1


Query: 58  PKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLER 117
           P + +  P KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE 
Sbjct: 62  PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEN 121

Query: 118 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYVDVN 177
           AEPAIIAATGTGTVPAIAMSVNGTLKIPTTT++ +     ++  KK+RKRP+NS+Y+D++
Sbjct: 122 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSD--MGENLMKKKRKRPSNSEYIDIS 181

Query: 178 DAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIP--GAVFMV 237
           DAVS S S  A  + +        +A S   QQ  P G  P+WAIPSNA+IP  GA F++
Sbjct: 182 DAVSAS-SGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLI 241

Query: 238 PSVDCSSTRPQFFSFPTPAA---------PLINTTAR--PISTVPSKLHTSHIQANTTNQ 297
           P +   S +PQ  +FP  AA            +T AR  P+  VPS    S         
Sbjct: 242 PQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVS--------- 301

Query: 298 SSSTSNSSASKSESVMAPISSSTVTTNGK-----TTKQMLREFSLEIYDKEEL-QFMSRS 342
            S  S S+ S++ SVMAP SSS VTT        TT   LR+FSLEIY+K+EL QFMS +
Sbjct: 302 VSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTT 352

[Close]

BLAST of CmoCh17G000060 vs. TAIR10
Match: AT5G51910.1 (AT5G51910.1 TCP family transcription factor )

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-49
Identity = 140/277 (50.54%), Postives = 166/277 (59.93%), Query Frame = 1


Query: 66  PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAA 125
           PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII A
Sbjct: 52  PKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEA 111

Query: 126 TGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSAS--KKRRKRPANSDYVDVNDAVSVS 185
           TGTGTVPAIA+SVNGTLKIPT++   N    D      KKRRKR   SD+VDVND+   S
Sbjct: 112 TGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSS 171

Query: 186 VSAS-ASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDCSS 245
           V++  A  +ASN  V    V            GFVP W +       G  F+    D   
Sbjct: 172 VTSGLAPITASNYGVNILNVNTQ---------GFVPFWPMGM-----GTAFVTGGPDQMG 231

Query: 246 TRPQFFSFPTPA-APLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVMA 305
              Q ++ PT A AP +N  ARP+S                   S  SN+S +++E    
Sbjct: 232 ---QMWAIPTVATAPFLNVGARPVS-------------------SYVSNASDAEAE---- 282

Query: 306 PISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRS 339
                 + T+G  T Q LR+FSLEIYDK ELQF+  S
Sbjct: 292 ------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 282

[Close]

BLAST of CmoCh17G000060 vs. TAIR10
Match: AT3G27010.1 (AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 125.2 bits (313), Expect = 8.0e-29
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 1


Query: 62  SSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA 121
           + + PKR S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+
Sbjct: 69  NQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPS 128

Query: 122 IIAATGTGTVPAIAMS 138
           IIAATG+GT+PA A++
Sbjct: 129 IIAATGSGTIPASALA 144

[Close]

BLAST of CmoCh17G000060 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 5.2e-28
Identity = 88/223 (39.46%), Postives = 120/223 (53.81%), Query Frame = 1


Query: 11  DHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKTVSSIPPKRPS 70
           DH+H P   L + +S +S               +     ++  T+E        PPKR S
Sbjct: 6   DHNHRPNFPLQLLDSSTS--------------SSSTSLAIISTTSEPNSEPKKPPPKRTS 65

Query: 71  TKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGT 130
           TKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA+IAATGTGT
Sbjct: 66  TKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT 125

Query: 131 VPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYVDVNDAVSVSVSASASA 190
           +PA   S+N +L+   ++ S+    T  S+        + + ++     V     + +S+
Sbjct: 126 IPANFTSLNISLRSSRSSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKNESHSSS 185

Query: 191 SASN--------GCVQAATVAGSPAVQQPFPPGFVPVWAIPSN 226
           S+S+        G     + AGS    Q   P   P W+   N
Sbjct: 186 SSSSQLLDHNQMGNYLVQSTAGSLPTSQ--SPATAPFWSSGDN 212

[Close]

BLAST of CmoCh17G000060 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 122.5 bits (306), Expect = 5.2e-28
Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 1


Query: 6   KQDLDDHHHSPPTHLSINNSDS--SPMNLLPLAPKREHPDNDHET---QVVKFTAEIPKT 65
           K D DD+H   P+  S ++  S      L    P+ +   +  +T   ++++   E    
Sbjct: 46  KHDPDDNHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVV 105

Query: 66  VSSIPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAE 125
            +  PP KR STKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AE
Sbjct: 106 AAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 165

Query: 126 PAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSAS 162
           P++IAATGTGT+PA   S+N +L+  ++ SS +  S  +SA+
Sbjct: 166 PSVIAATGTGTIPANFTSLNISLR--SSGSSMSLPSHFRSAA 205

[Close]

BLAST of CmoCh17G000060 vs. NCBI nr
Match: gi|659120353|ref|XP_008460149.1| (PREDICTED: transcription factor TCP9 [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 2.0e-135
Identity = 271/341 (79.47%), Postives = 295/341 (86.51%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKT 60
           MAD  KQ+LDD   SPPTHL IN+SDSS M+LLPL PK+EHPD++    ++ F  +IPKT
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHDLLTFNPDIPKT 60

Query: 61  VSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP 120
           +SS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP
Sbjct: 61  LSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP 120

Query: 121 AIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYVDVNDAV 180
           AIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA KKRRKRPANSDYVDVNDA+
Sbjct: 121 AIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYVDVNDAL 180

Query: 181 SVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDC 240
           SVS+SAS              VAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV C
Sbjct: 181 SVSISAS-------------NVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVM 300
           SSTRPQ FSF  PAAP+INTTARPIS  PSK  TSHIQ++ TNQSSSTS+SSASKS+SVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSER 342
           APISSS+V  +GKTT QMLR+FSLEIYDKEELQFM+RSS +
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSK 328

[Close]

BLAST of CmoCh17G000060 vs. NCBI nr
Match: gi|449454616|ref|XP_004145050.1| (PREDICTED: transcription factor TCP9 [Cucumis sativus])

HSP 1 Score: 484.6 bits (1246), Expect = 1.5e-133
Identity = 271/341 (79.47%), Postives = 292/341 (85.63%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKT 60
           MAD  KQ+LDD   SPPTHL IN+SDSS M+LLPL PK+EHPD++    ++ F  +IPKT
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHDLLTFNPDIPKT 60

Query: 61  VSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP 120
           +SS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP
Sbjct: 61  LSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEP 120

Query: 121 AIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYVDVNDAV 180
           AIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA KKRRKRPANSDYVDVNDA+
Sbjct: 121 AIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYVDVNDAL 180

Query: 181 SVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDC 240
           SVS+SAS              VAGS AVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV C
Sbjct: 181 SVSISAS-------------NVAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVM 300
           SSTRPQ FSF TPAAPLINTTARPIS  PSK  TSHIQ++ TNQSSSTS+SSASKS+SVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSER 342
           APISSS    +GKTT QMLR+FSLEIYDKEELQFMS SS +
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSK 324

[Close]

BLAST of CmoCh17G000060 vs. NCBI nr
Match: gi|823186387|ref|XP_012489844.1| (PREDICTED: transcription factor TCP9 [Gossypium raimondii])

HSP 1 Score: 293.9 bits (751), Expect = 3.7e-76
Identity = 192/353 (54.39%), Postives = 227/353 (64.31%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKT 60
           MA IHK ++++        LSIN    +  +  P    +E PD D     +     +P  
Sbjct: 52  MAAIHKLEVEEDADPRAVVLSINGGGDAAPSKNP----KEEPDIDTTLGAMPTAVHVPSG 111

Query: 61  VSSIP-------PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 120
           V   P       PKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW
Sbjct: 112 VPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 171

Query: 121 LLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDY 180
           LLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT   SN +      SKK+ KRPANS+Y
Sbjct: 172 LLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTT---SNANPEPGDPSKKKHKRPANSEY 231

Query: 181 VDVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVF 240
           VD+NDAVSVS   +   +      Q A V          P G VP+WAIPSN ++PGA F
Sbjct: 232 VDINDAVSVSSGLAPVVTPQQQQQQQAAV---------LPQGLVPIWAIPSNTVVPGAFF 291

Query: 241 MVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHT---SHIQANTTNQSSS 300
           MVP   S+   ST+P  F+FP  A P+IN +ARPIS+  S +     S +Q+N    S +
Sbjct: 292 MVPPMASMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVAVTSCT 351

Query: 301 TSNSSASKSESVMAPISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSE 341
              S A+K+ SVMAP SSS  +    TT QMLR+FSLEIYDK+ELQFM+RSS+
Sbjct: 352 VPVSKAAKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRSSK 388

[Close]

BLAST of CmoCh17G000060 vs. NCBI nr
Match: gi|763774068|gb|KJB41191.1| (hypothetical protein B456_007G094200 [Gossypium raimondii])

HSP 1 Score: 293.9 bits (751), Expect = 3.7e-76
Identity = 192/353 (54.39%), Postives = 227/353 (64.31%), Query Frame = 1


Query: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHETQVVKFTAEIPKT 60
           MA IHK ++++        LSIN    +  +  P    +E PD D     +     +P  
Sbjct: 1   MAAIHKLEVEEDADPRAVVLSINGGGDAAPSKNP----KEEPDIDTTLGAMPTAVHVPSG 60

Query: 61  VSSIP-------PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 120
           V   P       PKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW
Sbjct: 61  VPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRW 120

Query: 121 LLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDY 180
           LLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT   SN +      SKK+ KRPANS+Y
Sbjct: 121 LLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTT---SNANPEPGDPSKKKHKRPANSEY 180

Query: 181 VDVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVF 240
           VD+NDAVSVS   +   +      Q A V          P G VP+WAIPSN ++PGA F
Sbjct: 181 VDINDAVSVSSGLAPVVTPQQQQQQQAAV---------LPQGLVPIWAIPSNTVVPGAFF 240

Query: 241 MVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHT---SHIQANTTNQSSS 300
           MVP   S+   ST+P  F+FP  A P+IN +ARPIS+  S +     S +Q+N    S +
Sbjct: 241 MVPPMASMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVAVTSCT 300

Query: 301 TSNSSASKSESVMAPISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSE 341
              S A+K+ SVMAP SSS  +    TT QMLR+FSLEIYDK+ELQFM+RSS+
Sbjct: 301 VPVSKAAKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRSSK 337

[Close]

BLAST of CmoCh17G000060 vs. NCBI nr
Match: gi|743789205|ref|XP_011035583.1| (PREDICTED: transcription factor TCP9-like [Populus euphratica])

HSP 1 Score: 290.4 bits (742), Expect = 4.1e-75
Identity = 188/321 (58.57%), Postives = 222/321 (69.16%), Query Frame = 1


Query: 31  NLLPLAPKREHPDNDHETQ----VVKFTAEIPKTVSSI-PPKRPSTKDRHTKVEGRGRRI 90
           N +  APK E    D        VV F A IP  ++++ PPKR STKDRHTKVEGRGRRI
Sbjct: 27  NDMSAAPKEEPCTEDRSPTPPLAVVPFAA-IPMPLNTVTPPKRASTKDRHTKVEGRGRRI 86

Query: 91  RIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIP 150
           R+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAI+AATGTGTVPAIAMSVNGTLKIP
Sbjct: 87  RMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIVAATGTGTVPAIAMSVNGTLKIP 146

Query: 151 TTTSSSNQDSTDQSASKKRRKRPANSDYVDVNDAVSVSVSASASASASNGCVQAATVAGS 210
           TTTSSS +   D+  +KK+RKRPANS+YVDVND+VSVS S +   +      QA      
Sbjct: 147 TTTSSSAEP--DEPNAKKKRKRPANSEYVDVNDSVSVSASLAPITTRQPPQPQA-----Q 206

Query: 211 PAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPI 270
           P V    P G VP+WAIPSN ++PGA FMVPS+   S +PQ F+FP  A+PLIN + RPI
Sbjct: 207 PPVTA-VPQGLVPMWAIPSNTVVPGAFFMVPSMPGPSNQPQIFTFPAAASPLINISPRPI 266

Query: 271 STVPSKLHTSHIQANTTNQSSSTSNSSASKSESVMAPISSS-----TVTTNGKTTKQMLR 330
           S+  S + ++   A         S S   K  S+ AP SSS     T +T   +T QMLR
Sbjct: 267 SSFVSSMQSNIAVA------LPVSGSKPGKGISMTAPSSSSAHTTRTTSTTTNSTPQMLR 326

Query: 331 EFSLEIYDKEELQFMSRSSER 342
           +FSLEIYDK+ELQFMSRSS++
Sbjct: 327 DFSLEIYDKQELQFMSRSSKQ 332

The following BLAST results are available for this feature:

BLAST of CmoCh17G000060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP9_ARATH	2.5e-64	54.79	Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=1 SV=1	[more]
TCP19_ARATH	4.2e-48	50.54	Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1	[more]
PCF2_ORYSJ	1.5e-29	41.35	Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1	[more]
PCF2_ORYSI	1.5e-29	41.35	Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=3 SV=1	[more]
TCP20_ARATH	1.4e-27	77.63	Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1	[more]

BLAST of CmoCh17G000060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU1_CUCSA	1.0e-133	79.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G075180 PE=4 SV=1	[more]
A0A0D2SH07_GOSRA	2.6e-76	54.39	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G094200 PE=4 SV=1	[more]
A0A061DVP1_THECC	6.3e-75	54.47	TCP family transcription factor OS=Theobroma cacao GN=TCM_005447 PE=4 SV=1	[more]
B9IC90_POPTR	2.4e-74	53.85	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07450g PE=4 SV=2	[more]
B9GPT7_POPTR	2.1e-70	52.94	TCP family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0...	[more]

BLAST of CmoCh17G000060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45680.1	1.4e-65	54.79	TCP family transcription factor	[more]
AT5G51910.1	2.4e-49	50.54	TCP family transcription factor	[more]
AT3G27010.1	8.0e-29	77.63	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G69690.1	5.2e-28	39.46	TCP family transcription factor	[more]
AT3G47620.1	5.2e-28	48.15	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]

BLAST of CmoCh17G000060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120353\|ref\|XP_008460149.1\|	2.0e-135	79.47	PREDICTED: transcription factor TCP9 [Cucumis melo]	[more]
gi\|449454616\|ref\|XP_004145050.1\|	1.5e-133	79.47	PREDICTED: transcription factor TCP9 [Cucumis sativus]	[more]
gi\|823186387\|ref\|XP_012489844.1\|	3.7e-76	54.39	PREDICTED: transcription factor TCP9 [Gossypium raimondii]	[more]
gi\|763774068\|gb\|KJB41191.1\|	3.7e-76	54.39	hypothetical protein B456_007G094200 [Gossypium raimondii]	[more]
gi\|743789205\|ref\|XP_011035583.1\|	4.1e-75	58.57	PREDICTED: transcription factor TCP9-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048513	animal organ development
biological_process	GO:0009987	cellular process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044699	single-organism process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G000060.1	CmoCh17G000060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 70..172 score: 2.4
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 71..125 score: 26
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 60..342 score: 2.0
None	No IPR available	PANTHER	PTHR31072:SF10	TRANSCRIPTION FACTOR TCP9	coord: 60..342 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G000060	Cucsa.363020	Cucumber (Gy14) v1	cgycmoB0998
CmoCh17G000060	CmaCh17G000040	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G000060	CmaCh08G009380	Cucurbita maxima (Rimu)	cmacmoB904
CmoCh17G000060	Cla006939	Watermelon (97103) v1	cmowmB354
CmoCh17G000060	Csa6G075180	Cucumber (Chinese Long) v2	cmocuB372
CmoCh17G000060	MELO3C022520	Melon (DHL92) v3.5.1	cmomeB307
CmoCh17G000060	ClCG06G000180	Watermelon (Charleston Gray)	cmowcgB326
CmoCh17G000060	CSPI06G05640	Wild cucumber (PI 183967)	cmocpiB375
CmoCh17G000060	Lsi09G019210	Bottle gourd (USVL1VR-Ls)	cmolsiB321
CmoCh17G000060	Cp4.1LG12g00170	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G000060	Cp4.1LG17g02400	Cucurbita pepo (Zucchini)	cmocpeB346
CmoCh17G000060	MELO3C022520.2	Melon (DHL92) v3.6.1	cmomedB352
CmoCh17G000060	CsaV3_6G005960	Cucumber (Chinese Long) v3	cmocucB0447
CmoCh17G000060	Cla97C06G109440	Watermelon (97103) v2	cmowmbB362
CmoCh17G000060	BhiUN123G61	Wax gourd	cmowgoB0497
CmoCh17G000060	CsGy6G005570	Cucumber (Gy14) v2	cgybcmoB746
CmoCh17G000060	Carg11101	Silver-seed gourd	carcmoB1447
CmoCh17G000060	Carg10228	Silver-seed gourd	carcmoB0320

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G000060	CmoCh08G009070	Cucurbita moschata (Rifu)	cmocmoB326

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G000060	Cucumber (Gy14) v2	cgybcmoB735