CmaCh17G000040 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G000040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	TCP family transcription factor
Location	Cma_Chr17 : 24517 .. 25569 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCACAAACAAGAACTCGACGACGACGAAGACGACGACCACCACCACTCTCCGCCCACCCATCTCTGTATCAATAACTCCGACTCCTCTCCAATGAACCTTCTTCCCCTTGCTCCCAAGCGGGAGCATCCCGACAACGACCACGAAACTCAGGTCCTCAAGTTCACGGCAGAGATACCTAAAACGGTCTCGTCTATCCCCCCCAAGAGACCCTCCACCAAGGATCGCCACACCAAGGTCGAGGGCCGAGGCCGGAGAATCCGAATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTTCTCGAACGGGCCGAGCCGGCGATCATCGCGGCTACTGGAACTGGTACCGTTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCCACCGATCAATCCGCCAGTAAGAAGCGGCGTAAGCGCCCCACTAACAGTGACTATGTTGACGTAAATGACGCCGTTTCCGTTTCCGTTTCCGTCTCCGCCTCCGCCTCCGCCCCGAACGGCGCTGTTCAGGCCGCCACCGTTGCCGGTTCCCCCGCCGTCCAACAGCCTTTTCCACCGGGGTTTGTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGATTGCTCTTCCACCCGTCCGCAGTTTTTCTCATTCCCGACACCGGCAGCGCCGCTCATCAACACAACGGCCCGACCCATTTCCACCGTCCCGTCGAAGCTGCACACGTCTCACATTCAAGCAAACACCACCAATCAAAGCTCGAGCACTTCAAACTCCTCCGCTTCCAAGTCTGAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTCCCGACAAACGATAAAACGACGAAACAGATGCTCAGAGAATTCTCATTGGAGATATACGATAAGGAAGAGCTTCAATTCATGTCTCGCTCGTCGGAAAGAATGAAGACAGAATAG

mRNA sequence

ATGGCCGATATTCACAAACAAGAACTCGACGACGACGAAGACGACGACCACCACCACTCTCCGCCCACCCATCTCTGTATCAATAACTCCGACTCCTCTCCAATGAACCTTCTTCCCCTTGCTCCCAAGCGGGAGCATCCCGACAACGACCACGAAACTCAGGTCCTCAAGTTCACGGCAGAGATACCTAAAACGGTCTCGTCTATCCCCCCCAAGAGACCCTCCACCAAGGATCGCCACACCAAGGTCGAGGGCCGAGGCCGGAGAATCCGAATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTTCTCGAACGGGCCGAGCCGGCGATCATCGCGGCTACTGGAACTGGTACCGTTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCCACCGATCAATCCGCCAGTAAGAAGCGGCGTAAGCGCCCCACTAACAGTGACTATGTTGACGTAAATGACGCCGTTTCCGTTTCCGTTTCCGTCTCCGCCTCCGCCTCCGCCCCGAACGGCGCTGTTCAGGCCGCCACCGTTGCCGGTTCCCCCGCCGTCCAACAGCCTTTTCCACCGGGGTTTGTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGATTGCTCTTCCACCCGTCCGCAGTTTTTCTCATTCCCGACACCGGCAGCGCCGCTCATCAACACAACGGCCCGACCCATTTCCACCGTCCCGTCGAAGCTGCACACGTCTCACATTCAAGCAAACACCACCAATCAAAGCTCGAGCACTTCAAACTCCTCCGCTTCCAAGTCTGAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTCCCGACAAACGATAAAACGACGAAACAGATGCTCAGAGAATTCTCATTGGAGATATACGATAAGGAAGAGCTTCAATTCATGTCTCGCTCGTCGGAAAGAATGAAGACAGAATAG

Coding sequence (CDS)

ATGGCCGATATTCACAAACAAGAACTCGACGACGACGAAGACGACGACCACCACCACTCTCCGCCCACCCATCTCTGTATCAATAACTCCGACTCCTCTCCAATGAACCTTCTTCCCCTTGCTCCCAAGCGGGAGCATCCCGACAACGACCACGAAACTCAGGTCCTCAAGTTCACGGCAGAGATACCTAAAACGGTCTCGTCTATCCCCCCCAAGAGACCCTCCACCAAGGATCGCCACACCAAGGTCGAGGGCCGAGGCCGGAGAATCCGAATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGTGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTTCTCGAACGGGCCGAGCCGGCGATCATCGCGGCTACTGGAACTGGTACCGTTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCCACCGATCAATCCGCCAGTAAGAAGCGGCGTAAGCGCCCCACTAACAGTGACTATGTTGACGTAAATGACGCCGTTTCCGTTTCCGTTTCCGTCTCCGCCTCCGCCTCCGCCCCGAACGGCGCTGTTCAGGCCGCCACCGTTGCCGGTTCCCCCGCCGTCCAACAGCCTTTTCCACCGGGGTTTGTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGATTGCTCTTCCACCCGTCCGCAGTTTTTCTCATTCCCGACACCGGCAGCGCCGCTCATCAACACAACGGCCCGACCCATTTCCACCGTCCCGTCGAAGCTGCACACGTCTCACATTCAAGCAAACACCACCAATCAAAGCTCGAGCACTTCAAACTCCTCCGCTTCCAAGTCTGAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTCCCGACAAACGATAAAACGACGAAACAGATGCTCAGAGAATTCTCATTGGAGATATACGATAAGGAAGAGCTTCAATTCATGTCTCGCTCGTCGGAAAGAATGAAGACAGAATAG

Protein sequence

MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTAEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPTNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSERMKTE

Homology

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BLAST of CmaCh17G000040 vs. Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.6e-64
Identity = 167/307 (54.40%), Postives = 204/307 (66.45%), Query Frame = 1


Query: 63  PKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLER 122
           P + +  P KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE 
Sbjct: 62  PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEN 121

Query: 123 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPTNSDYVDVN 182
           AEPAIIAATGTGTVPAIAMSVNGTLKIPTTT++ +     ++  KK+RKRP+NS+Y+D++
Sbjct: 122 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSD--MGENLMKKKRKRPSNSEYIDIS 181

Query: 183 DAVSVSVSVSASASA----PNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIP--GA 242
           DAVS S  ++  A+     P  A+ ++TVA     QQ  P G  P+WAIPSNA+IP  GA
Sbjct: 182 DAVSASSGLAPIATTTTIQPPQALASSTVA-----QQLLPQGMYPMWAIPSNAMIPTVGA 241

Query: 243 VFMVPSVDCSSTRPQFFSFPTPAA---------PLINTTAR--PISTVPSKLHTSHIQAN 302
            F++P +   S +PQ  +FP  AA            +T AR  P+  VPS    S     
Sbjct: 242 FFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVS----- 301

Query: 303 TTNQSSSTSNSSASKSESVMAPISSSTVPTNDK-----TTKQMLREFSLEIYDKEEL-QF 347
                S  S S+ S++ SVMAP SSS V T        TT   LR+FSLEIY+K+EL QF
Sbjct: 302 ----VSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQF 352

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BLAST of CmaCh17G000040 vs. Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.1e-47
Identity = 138/277 (49.82%), Postives = 163/277 (58.84%), Query Frame = 1


Query: 71  PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAA 130
           PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII A
Sbjct: 52  PKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEA 111

Query: 131 TGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSAS--KKRRKRPTNSDYVDVNDAVSVS 190
           TGTGTVPAIA+SVNGTLKIPT++   N    D      KKRRKR   SD+VDVND+   S
Sbjct: 112 TGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSS 171

Query: 191 VSVS-ASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDCSS 250
           V+   A  +A N  V    V            GFVP W +       G  F+    D   
Sbjct: 172 VTSGLAPITASNYGVNILNVNTQ---------GFVPFWPMGM-----GTAFVTGGPDQMG 231

Query: 251 TRPQFFSFPTPA-APLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVMA 310
              Q ++ PT A AP +N  ARP+S                   S  SN+S +++E    
Sbjct: 232 ---QMWAIPTVATAPFLNVGARPVS-------------------SYVSNASDAEAE---- 282

Query: 311 PISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRS 344
                 + T+   T Q LR+FSLEIYDK ELQF+  S
Sbjct: 292 ------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 282

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BLAST of CmaCh17G000040 vs. Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-30
Identity = 112/267 (41.95%), Postives = 152/267 (56.93%), Query Frame = 1


Query: 70  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 129
           PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PP--PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 130 ATGTGTVPAIAMSVNGTLKIPTTTSSSN-------QDSTDQSASKKRRKRPTNSDYVDVN 189
           ATGTGTVPAIA +V+G L+IPT +SSS+        D  + SA ++R+ +PT        
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTR------- 190

Query: 190 DAVSVSVSVSASASAPNGAVQAATV---AGSPAVQQP----------FPPGFVPVWAIPS 249
            AV+ +  ++ +A A    V A  +   +G  A+  P           P G VPV+A+P+
Sbjct: 191 -AVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPA 250

Query: 250 ---------NAIIP--GAVFMVP----SVDCSSTRPQFFSFPTPAAPLINTTARPISTVP 302
                    N +IP   AV+MVP    +    +   QF++  + A  L+N      +  P
Sbjct: 251 TGSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQS-APQLVNFAG---AQFP 310

[Close]

BLAST of CmaCh17G000040 vs. Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-30
Identity = 112/267 (41.95%), Postives = 152/267 (56.93%), Query Frame = 1


Query: 70  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 129
           PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PP--PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 130 ATGTGTVPAIAMSVNGTLKIPTTTSSSN-------QDSTDQSASKKRRKRPTNSDYVDVN 189
           ATGTGTVPAIA +V+G L+IPT +SSS+        D  + SA ++R+ +PT        
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTR------- 190

Query: 190 DAVSVSVSVSASASAPNGAVQAATV---AGSPAVQQP----------FPPGFVPVWAIPS 249
            AV+ +  ++ +A A    V A  +   +G  A+  P           P G VPV+A+P+
Sbjct: 191 -AVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPA 250

Query: 250 ---------NAIIP--GAVFMVP----SVDCSSTRPQFFSFPTPAAPLINTTARPISTVP 302
                    N +IP   AV+MVP    +    +   QF++  + A  L+N      +  P
Sbjct: 251 TGSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQS-APQLVNFAG---AQFP 310

[Close]

BLAST of CmaCh17G000040 vs. Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 1


Query: 67  SSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA 126
           + + PKR S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+
Sbjct: 69  NQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPS 128

Query: 127 IIAATGTGTVPAIAMS 143
           IIAATG+GT+PA A++
Sbjct: 129 IIAATGSGTIPASALA 144

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BLAST of CmaCh17G000040 vs. TrEMBL
Match: A0A0A0KCU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G075180 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.5e-132
Identity = 272/346 (78.61%), Postives = 293/346 (84.68%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MAD  KQELDDD+D     SPPTHL IN+SDSS M+LLPL PK+EHPD++    +L F  
Sbjct: 1   MADNQKQELDDDDD-----SPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHDLLTFNP 60

Query: 61  EIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 120
           +IPKT+SS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL
Sbjct: 61  DIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 120

Query: 121 ERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPTNSDYVD 180
           ERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA KKRRKRP NSDYVD
Sbjct: 121 ERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYVD 180

Query: 181 VNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMV 240
           VNDA+SVS+S             A+ VAGS AVQQ FPPGFVPVWAIPSNAIIPGAVFMV
Sbjct: 181 VNDALSVSIS-------------ASNVAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMV 240

Query: 241 PSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASK 300
           PSV CSSTRPQ FSF TPAAPLINTTARPIS  PSK  TSHIQ++ TNQSSSTS+SSASK
Sbjct: 241 PSVACSSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASK 300

Query: 301 SESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSER 347
           S+SVMAPISSS    + KTT QMLR+FSLEIYDKEELQFMS SS +
Sbjct: 301 SQSVMAPISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSK 324

[Close]

BLAST of CmaCh17G000040 vs. TrEMBL
Match: A0A0D2SH07_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G094200 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 9.9e-76
Identity = 193/358 (53.91%), Postives = 227/358 (63.41%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MA IHK E+++D D          L IN    +  +  P    +E PD D     +    
Sbjct: 1   MAAIHKLEVEEDADPR-----AVVLSINGGGDAAPSKNP----KEEPDIDTTLGAMPTAV 60

Query: 61  EIPKTVSSIP-------PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120
            +P  V   P       PKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG
Sbjct: 61  HVPSGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120

Query: 121 ETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRP 180
           ETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT   SN +      SKK+ KRP
Sbjct: 121 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTT---SNANPEPGDPSKKKHKRP 180

Query: 181 TNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAII 240
            NS+YVD+NDAVSVS  ++   +      Q A V          P G VP+WAIPSN ++
Sbjct: 181 ANSEYVDINDAVSVSSGLAPVVTPQQQQQQQAAV---------LPQGLVPIWAIPSNTVV 240

Query: 241 PGAVFMVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHT---SHIQANTT 300
           PGA FMVP   S+   ST+P  F+FP  A P+IN +ARPIS+  S +     S +Q+N  
Sbjct: 241 PGAFFMVPPMASMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVA 300

Query: 301 NQSSSTSNSSASKSESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSE 346
             S +   S A+K+ SVMAP SSS       TT QMLR+FSLEIYDK+ELQFM+RSS+
Sbjct: 301 VTSCTVPVSKAAKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRSSK 337

[Close]

BLAST of CmaCh17G000040 vs. TrEMBL
Match: A0A061DVP1_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_005447 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.4e-74
Identity = 199/370 (53.78%), Postives = 234/370 (63.24%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MA I KQE+++DED     +    L IN    +        PK E PD +    V+    
Sbjct: 1   MAAIQKQEVEEDED-----TRAVDLSINGGGDAAA-AASKNPKEE-PDTEAAIGVMPMAV 60

Query: 61  EIPK-------TVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120
            +P        T     PKR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDG
Sbjct: 61  HVPSAIPMPLVTAPPTAPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 120

Query: 121 ETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRP 180
           ETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIP TTS++N +  DQ  SKK+RKRP
Sbjct: 121 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIP-TTSNANPEPGDQ--SKKKRKRP 180

Query: 181 TNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAII 240
            NS+YVD+NDAVSVS  ++   ++     Q       P V    P G VPVWAIPSNA++
Sbjct: 181 ANSEYVDINDAVSVSSGLAPVITSQRRQQQQQL----PPV---LPQGLVPVWAIPSNAVV 240

Query: 241 PGAVFMVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLH--------TSHI 300
           PGA FMVP   SV   ST P  F+FP  A PLIN +ARPIS+  S +            +
Sbjct: 241 PGAFFMVPPMTSVAGPSTEPHLFTFPATATPLINISARPISSFVSAMQHGVSIAATPGQL 300

Query: 301 QANTTNQSSSTSNSSASKSESVMAP-------ISSSTVPTNDKTTKQMLREFSLEIYDKE 346
           Q+N    SS+   S   K+ SVMAP       I+SS+  T   TT QMLR+FSLEIYDK+
Sbjct: 301 QSNVAVTSSTLPVSKTVKTTSVMAPSSSSAATITSSSASTTTTTTTQMLRDFSLEIYDKQ 353

[Close]

BLAST of CmaCh17G000040 vs. TrEMBL
Match: B9IC90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07450g PE=4 SV=2)

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-73
Identity = 195/364 (53.57%), Postives = 232/364 (63.74%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNL-----LPLAPKREHPDNDHETQ- 60
           +A + KQEL +D              + N    P N      +  APK E    D     
Sbjct: 49  VAPVQKQELGEDASMTTADLRINSGELRNIRGGPTNKKNYNDMSAAPKEEPCTEDRSPTP 108

Query: 61  ---VLKFTAEIPKTVSSI-PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHK 120
              V+ F A IP  ++++ PPKR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHK
Sbjct: 109 PLAVVPFAA-IPMPLTTVTPPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHK 168

Query: 121 SDGETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRR 180
           SDGETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSS +   D+  +KK+R
Sbjct: 169 SDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSAE--PDEPNAKKKR 228

Query: 181 KRPTNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQP---FPPGFVPVWAI 240
           KRP NS+YVDVND+VSVS S++   + P    Q       P  QQP    P G VP+WAI
Sbjct: 229 KRPANSEYVDVNDSVSVSASLAPITTRPRQPPQ-------PQAQQPVAAVPQGLVPMWAI 288

Query: 241 PSNAIIPGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTT 300
           PSN ++PGA FMVPS+     +PQ F+FP  A+PLIN + RPIS+  S + ++   A   
Sbjct: 289 PSNTVVPGAFFMVPSMPGPFNQPQIFTFPAAASPLINISPRPISSFVSSMQSNIAVA--- 348

Query: 301 NQSSSTSNSSASKSESVMAPISSS-----TVPTNDKTTKQMLREFSLEIYDKEELQFMSR 347
                 S S   K  S  AP SSS     T  T   +T  MLR+FSLEIYDK+ELQFMSR
Sbjct: 349 ---LPVSGSKPGKGISRTAPSSSSAHTIRTPSTTTNSTPHMLRDFSLEIYDKQELQFMSR 396

[Close]

BLAST of CmaCh17G000040 vs. TrEMBL
Match: B9GPT7_POPTR (TCP family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0002s15360g PE=4 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 2.5e-71
Identity = 192/361 (53.19%), Postives = 224/361 (62.05%), Query Frame = 1


Query: 1   MADIHKQELDDDED--------DDHHHSPPTHLCINNSDSSPMNL-LPLAPKREHPDNDH 60
           MA + KQEL +DED        +    S       N  D + M++ L   P  E      
Sbjct: 1   MASMQKQELGEDEDMRTVDLRINSRELSNIRARPTNRKDCNDMSVALKEEPSTEERSPTP 60

Query: 61  ETQVLKFTAEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKS 120
              V+   A      +  P KRPSTKDRHTKVEGRGRRIR+PA CAARIFQLTRELG+KS
Sbjct: 61  PLGVMPLAAVSVPLTTVTPLKRPSTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGYKS 120

Query: 121 DGETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRK 180
           DGETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIP TT+SS+     Q  + K RK
Sbjct: 121 DGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPITTNSSS--GLGQPNATKNRK 180

Query: 181 RPTNSDYVDVNDAVSVSVSVS-ASASAPNGAVQAATVAGSPAVQQ---PFPPGFVPVWAI 240
           RP NS+YVDVND VSVS S++  +   P    Q       P  QQ     P G VP+WAI
Sbjct: 181 RPANSEYVDVNDTVSVSASLAPVTTQQPQSQPQL-----PPQPQQTVAAVPQGLVPMWAI 240

Query: 241 PSNAIIPGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTT 300
           PSNA++PGA FMVPS+   S +PQ F+FP  A PLIN +ARPIS+  S + ++   A   
Sbjct: 241 PSNAVVPGAFFMVPSIAGPSNQPQIFTFPAAATPLINISARPISSFVSSMQSNMAVA--- 300

Query: 301 NQSSSTSNSSASKSESVMAPISS-----STVPTNDKTTKQMLREFSLEIYDKEELQFMSR 344
                 S S  +K  S+MAP SS     ST  T    T QMLR+FSLEIYDK+ELQFMSR
Sbjct: 301 ---VPVSGSMTAKGISMMAPSSSSACTVSTTSTTTNRTPQMLRDFSLEIYDKQELQFMSR 348

[Close]

BLAST of CmaCh17G000040 vs. TAIR10
Match: AT2G45680.1 (AT2G45680.1 TCP family transcription factor )

HSP 1 Score: 246.1 bits (627), Expect = 3.1e-65
Identity = 167/307 (54.40%), Postives = 204/307 (66.45%), Query Frame = 1


Query: 63  PKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLER 122
           P + +  P KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE 
Sbjct: 62  PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEN 121

Query: 123 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPTNSDYVDVN 182
           AEPAIIAATGTGTVPAIAMSVNGTLKIPTTT++ +     ++  KK+RKRP+NS+Y+D++
Sbjct: 122 AEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSD--MGENLMKKKRKRPSNSEYIDIS 181

Query: 183 DAVSVSVSVSASASA----PNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIP--GA 242
           DAVS S  ++  A+     P  A+ ++TVA     QQ  P G  P+WAIPSNA+IP  GA
Sbjct: 182 DAVSASSGLAPIATTTTIQPPQALASSTVA-----QQLLPQGMYPMWAIPSNAMIPTVGA 241

Query: 243 VFMVPSVDCSSTRPQFFSFPTPAA---------PLINTTAR--PISTVPSKLHTSHIQAN 302
            F++P +   S +PQ  +FP  AA            +T AR  P+  VPS    S     
Sbjct: 242 FFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVS----- 301

Query: 303 TTNQSSSTSNSSASKSESVMAPISSSTVPTNDK-----TTKQMLREFSLEIYDKEEL-QF 347
                S  S S+ S++ SVMAP SSS V T        TT   LR+FSLEIY+K+EL QF
Sbjct: 302 ----VSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQF 352

[Close]

BLAST of CmaCh17G000040 vs. TAIR10
Match: AT5G51910.1 (AT5G51910.1 TCP family transcription factor )

HSP 1 Score: 189.1 bits (479), Expect = 4.6e-48
Identity = 138/277 (49.82%), Postives = 163/277 (58.84%), Query Frame = 1


Query: 71  PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAA 130
           PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII A
Sbjct: 52  PKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEA 111

Query: 131 TGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSAS--KKRRKRPTNSDYVDVNDAVSVS 190
           TGTGTVPAIA+SVNGTLKIPT++   N    D      KKRRKR   SD+VDVND+   S
Sbjct: 112 TGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSS 171

Query: 191 VSVS-ASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDCSS 250
           V+   A  +A N  V    V            GFVP W +       G  F+    D   
Sbjct: 172 VTSGLAPITASNYGVNILNVNTQ---------GFVPFWPMGM-----GTAFVTGGPDQMG 231

Query: 251 TRPQFFSFPTPA-APLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVMA 310
              Q ++ PT A AP +N  ARP+S                   S  SN+S +++E    
Sbjct: 232 ---QMWAIPTVATAPFLNVGARPVS-------------------SYVSNASDAEAE---- 282

Query: 311 PISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRS 344
                 + T+   T Q LR+FSLEIYDK ELQF+  S
Sbjct: 292 ------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 282

[Close]

BLAST of CmaCh17G000040 vs. TAIR10
Match: AT3G27010.1 (AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 125.2 bits (313), Expect = 8.1e-29
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 1


Query: 67  SSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA 126
           + + PKR S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+
Sbjct: 69  NQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPS 128

Query: 127 IIAATGTGTVPAIAMS 143
           IIAATG+GT+PA A++
Sbjct: 129 IIAATGSGTIPASALA 144

[Close]

BLAST of CmaCh17G000040 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 99/235 (42.13%), Postives = 125/235 (53.19%), Query Frame = 1


Query: 12  DEDDDHHHSP--PTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTAEIPKTVSSI 71
           D D DH+H P  P  L  +++ SS  +L                 ++  T+E        
Sbjct: 2   DPDPDHNHRPNFPLQLLDSSTSSSSTSLA----------------IISTTSEPNSEPKKP 61

Query: 72  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 131
           PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA+IA
Sbjct: 62  PPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 121

Query: 132 ATGTGTVPAIAMSVNGTLK----------IPTTTSSSNQDSTDQSAS----KKRRKRPTN 191
           ATGTGT+PA   S+N +L+          + TT SS    S  QS +     + + RP N
Sbjct: 122 ATGTGTIPANFTSLNISLRSSRSSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKN 181

Query: 192 SDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSN 231
             +     + S S  +       N  VQ  + AGS    Q   P   P W+   N
Sbjct: 182 ESH----SSSSSSSQLLDHNQMGNYLVQ--STAGSLPTSQ--SPATAPFWSSGDN 212

[Close]

BLAST of CmaCh17G000040 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-27
Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = 1


Query: 12  DEDDDHHHSPPTHLCINNSDSSPMNL---------LPLAPKREHPDNDHETQVLKFTAEI 71
           D DD+H   P       +S SS  +L          P +  ++      + ++L+   E 
Sbjct: 48  DPDDNHQQQPSP-----SSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEES 107

Query: 72  PKTVSSIPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLE 131
               +  PP KR STKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL+
Sbjct: 108 AVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQ 167

Query: 132 RAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSAS 167
           +AEP++IAATGTGT+PA   S+N +L+  ++ SS +  S  +SA+
Sbjct: 168 QAEPSVIAATGTGTIPANFTSLNISLR--SSGSSMSLPSHFRSAA 205

[Close]

BLAST of CmaCh17G000040 vs. NCBI nr
Match: gi|659120353|ref|XP_008460149.1| (PREDICTED: transcription factor TCP9 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 2.3e-134
Identity = 272/346 (78.61%), Postives = 296/346 (85.55%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MAD  KQELDDD+D     SPPTHL IN+SDSS M+LLPL PK+EHPD++    +L F  
Sbjct: 1   MADNQKQELDDDDD-----SPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHDLLTFNP 60

Query: 61  EIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 120
           +IPKT+SS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL
Sbjct: 61  DIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 120

Query: 121 ERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPTNSDYVD 180
           ERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA KKRRKRP NSDYVD
Sbjct: 121 ERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYVD 180

Query: 181 VNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMV 240
           VNDA+SVS+S             A+ VAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFMV
Sbjct: 181 VNDALSVSIS-------------ASNVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMV 240

Query: 241 PSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASK 300
           PSV CSSTRPQ FSF  PAAP+INTTARPIS  PSK  TSHIQ++ TNQSSSTS+SSASK
Sbjct: 241 PSVACSSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASK 300

Query: 301 SESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSER 347
           S+SVMAPISSS+V  + KTT QMLR+FSLEIYDKEELQFM+RSS +
Sbjct: 301 SQSVMAPISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSK 328

[Close]

BLAST of CmaCh17G000040 vs. NCBI nr
Match: gi|449454616|ref|XP_004145050.1| (PREDICTED: transcription factor TCP9 [Cucumis sativus])

HSP 1 Score: 480.7 bits (1236), Expect = 2.2e-132
Identity = 272/346 (78.61%), Postives = 293/346 (84.68%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MAD  KQELDDD+D     SPPTHL IN+SDSS M+LLPL PK+EHPD++    +L F  
Sbjct: 1   MADNQKQELDDDDD-----SPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHDLLTFNP 60

Query: 61  EIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 120
           +IPKT+SS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL
Sbjct: 61  DIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 120

Query: 121 ERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPTNSDYVD 180
           ERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA KKRRKRP NSDYVD
Sbjct: 121 ERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYVD 180

Query: 181 VNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMV 240
           VNDA+SVS+S             A+ VAGS AVQQ FPPGFVPVWAIPSNAIIPGAVFMV
Sbjct: 181 VNDALSVSIS-------------ASNVAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMV 240

Query: 241 PSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASK 300
           PSV CSSTRPQ FSF TPAAPLINTTARPIS  PSK  TSHIQ++ TNQSSSTS+SSASK
Sbjct: 241 PSVACSSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASK 300

Query: 301 SESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSER 347
           S+SVMAPISSS    + KTT QMLR+FSLEIYDKEELQFMS SS +
Sbjct: 301 SQSVMAPISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSK 324

[Close]

BLAST of CmaCh17G000040 vs. NCBI nr
Match: gi|823186387|ref|XP_012489844.1| (PREDICTED: transcription factor TCP9 [Gossypium raimondii])

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 193/358 (53.91%), Postives = 227/358 (63.41%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MA IHK E+++D D          L IN    +  +  P    +E PD D     +    
Sbjct: 52  MAAIHKLEVEEDADPR-----AVVLSINGGGDAAPSKNP----KEEPDIDTTLGAMPTAV 111

Query: 61  EIPKTVSSIP-------PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120
            +P  V   P       PKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG
Sbjct: 112 HVPSGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 171

Query: 121 ETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRP 180
           ETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT   SN +      SKK+ KRP
Sbjct: 172 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTT---SNANPEPGDPSKKKHKRP 231

Query: 181 TNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAII 240
            NS+YVD+NDAVSVS  ++   +      Q A V          P G VP+WAIPSN ++
Sbjct: 232 ANSEYVDINDAVSVSSGLAPVVTPQQQQQQQAAV---------LPQGLVPIWAIPSNTVV 291

Query: 241 PGAVFMVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHT---SHIQANTT 300
           PGA FMVP   S+   ST+P  F+FP  A P+IN +ARPIS+  S +     S +Q+N  
Sbjct: 292 PGAFFMVPPMASMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVA 351

Query: 301 NQSSSTSNSSASKSESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSE 346
             S +   S A+K+ SVMAP SSS       TT QMLR+FSLEIYDK+ELQFM+RSS+
Sbjct: 352 VTSCTVPVSKAAKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRSSK 388

[Close]

BLAST of CmaCh17G000040 vs. NCBI nr
Match: gi|763774068|gb|KJB41191.1| (hypothetical protein B456_007G094200 [Gossypium raimondii])

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 193/358 (53.91%), Postives = 227/358 (63.41%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHETQVLKFTA 60
           MA IHK E+++D D          L IN    +  +  P    +E PD D     +    
Sbjct: 1   MAAIHKLEVEEDADPR-----AVVLSINGGGDAAPSKNP----KEEPDIDTTLGAMPTAV 60

Query: 61  EIPKTVSSIP-------PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120
            +P  V   P       PKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG
Sbjct: 61  HVPSGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120

Query: 121 ETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRP 180
           ETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT   SN +      SKK+ KRP
Sbjct: 121 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTT---SNANPEPGDPSKKKHKRP 180

Query: 181 TNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAII 240
            NS+YVD+NDAVSVS  ++   +      Q A V          P G VP+WAIPSN ++
Sbjct: 181 ANSEYVDINDAVSVSSGLAPVVTPQQQQQQQAAV---------LPQGLVPIWAIPSNTVV 240

Query: 241 PGAVFMVP---SVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHT---SHIQANTT 300
           PGA FMVP   S+   ST+P  F+FP  A P+IN +ARPIS+  S +     S +Q+N  
Sbjct: 241 PGAFFMVPPMASMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVA 300

Query: 301 NQSSSTSNSSASKSESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSE 346
             S +   S A+K+ SVMAP SSS       TT QMLR+FSLEIYDK+ELQFM+RSS+
Sbjct: 301 VTSCTVPVSKAAKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRSSK 337

[Close]

BLAST of CmaCh17G000040 vs. NCBI nr
Match: gi|1000981502|ref|XP_015582875.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP9 [Ricinus communis])

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 188/362 (51.93%), Postives = 244/362 (67.40%), Query Frame = 1


Query: 1   MADIHKQELDDDEDDDHHHSPPTHLC-------INNSDSSPMNLLPLAPKREHPDNDHET 60
           MA  HK+ELD+D+D +++ + PT          + ++  +P+ ++P+A            
Sbjct: 1   MATFHKKELDEDDDRNNNAASPTKSVTPKEEPELEDASPAPLGVMPVA------------ 60

Query: 61  QVLKFTAEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120
             +   A I   ++++PPKR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDG
Sbjct: 61  --VHVPAAIRMPLTTVPPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 120

Query: 121 ETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRP 180
           ETIRWLLE AEPAIIAATGTGTVPAIAMSVNGTLKIPTT+++S++ + D ++ KK+RKRP
Sbjct: 121 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNTSSEPN-DPNSVKKKRKRP 180

Query: 181 TNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAII 240
            NS+Y+D+   VSVS  +     AP    Q   VA     Q   P G VP+WAIPSNA++
Sbjct: 181 ANSEYIDIPXTVSVSAPL-----APITTQQPQAVAVPQ--QAVVPQGLVPMWAIPSNAVV 240

Query: 241 PGAVFMVPSVDCS--STRPQFFSFPTPAAPLINTTARPISTVPSKLHTSH--IQANTTNQ 300
           PGA FMVP +  +  S +PQ F+F   A PL+N +ARPIS+  S +  +     A   + 
Sbjct: 241 PGAFFMVPPMAAAGPSNQPQIFAFQAAATPLVNISARPISSFVSSMQQAANIAVAVPVSG 300

Query: 301 SSSTSNSSASKSESVMAP------ISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRS 346
           SS+ S S  +K+ SVMAP      ISS+T  +   TT QMLR+FSLEIYDK+ELQFM+RS
Sbjct: 301 SSAVSTSKPAKATSVMAPTSSSAPISSNTTTSTTTTTTQMLRDFSLEIYDKQELQFMTRS 340

The following BLAST results are available for this feature:

BLAST of CmaCh17G000040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP9_ARATH	5.6e-64	54.40	Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=1 SV=1	[more]
TCP19_ARATH	8.1e-47	49.82	Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1	[more]
PCF2_ORYSI	3.1e-30	41.95	Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=3 SV=1	[more]
PCF2_ORYSJ	3.1e-30	41.95	Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1	[more]
TCP20_ARATH	1.4e-27	77.63	Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1	[more]

BLAST of CmaCh17G000040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU1_CUCSA	1.5e-132	78.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G075180 PE=4 SV=1	[more]
A0A0D2SH07_GOSRA	9.9e-76	53.91	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G094200 PE=4 SV=1	[more]
A0A061DVP1_THECC	2.4e-74	53.78	TCP family transcription factor OS=Theobroma cacao GN=TCM_005447 PE=4 SV=1	[more]
B9IC90_POPTR	1.2e-73	53.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07450g PE=4 SV=2	[more]
B9GPT7_POPTR	2.5e-71	53.19	TCP family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0...	[more]

BLAST of CmaCh17G000040 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45680.1	3.1e-65	54.40	TCP family transcription factor	[more]
AT5G51910.1	4.6e-48	49.82	TCP family transcription factor	[more]
AT3G27010.1	8.1e-29	77.63	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G69690.1	1.4e-28	42.13	TCP family transcription factor	[more]
AT3G47620.1	3.4e-27	47.27	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]

BLAST of CmaCh17G000040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120353\|ref\|XP_008460149.1\|	2.3e-134	78.61	PREDICTED: transcription factor TCP9 [Cucumis melo]	[more]
gi\|449454616\|ref\|XP_004145050.1\|	2.2e-132	78.61	PREDICTED: transcription factor TCP9 [Cucumis sativus]	[more]
gi\|823186387\|ref\|XP_012489844.1\|	1.4e-75	53.91	PREDICTED: transcription factor TCP9 [Gossypium raimondii]	[more]
gi\|763774068\|gb\|KJB41191.1\|	1.4e-75	53.91	hypothetical protein B456_007G094200 [Gossypium raimondii]	[more]
gi\|1000981502\|ref\|XP_015582875.1\|	2.4e-75	51.93	PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP9 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048513	animal organ development
biological_process	GO:0009987	cellular process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G000040.1	CmaCh17G000040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 75..176 score: 3.1
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 76..130 score: 26
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 65..347 score: 8.7
None	No IPR available	PANTHER	PTHR31072:SF10	TRANSCRIPTION FACTOR TCP9	coord: 65..347 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G000040	Cucsa.363020	Cucumber (Gy14) v1	cgycmaB0997
CmaCh17G000040	Cla006939	Watermelon (97103) v1	cmawmB359
CmaCh17G000040	Csa6G075180	Cucumber (Chinese Long) v2	cmacuB382
CmaCh17G000040	MELO3C022520	Melon (DHL92) v3.5.1	cmameB314
CmaCh17G000040	ClCG06G000180	Watermelon (Charleston Gray)	cmawcgB329
CmaCh17G000040	CSPI06G05640	Wild cucumber (PI 183967)	cmacpiB386
CmaCh17G000040	CmoCh08G009070	Cucurbita moschata (Rifu)	cmacmoB382
CmaCh17G000040	CmoCh17G000060	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G000040	Lsi09G019210	Bottle gourd (USVL1VR-Ls)	cmalsiB332
CmaCh17G000040	Cp4.1LG12g00170	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G000040	Cp4.1LG17g02400	Cucurbita pepo (Zucchini)	cmacpeB383
CmaCh17G000040	MELO3C022520.2	Melon (DHL92) v3.6.1	cmamedB366
CmaCh17G000040	CsaV3_6G005960	Cucumber (Chinese Long) v3	cmacucB0454
CmaCh17G000040	Cla97C06G109440	Watermelon (97103) v2	cmawmbB378
CmaCh17G000040	BhiUN123G61	Wax gourd	cmawgoB0498
CmaCh17G000040	CsGy6G005570	Cucumber (Gy14) v2	cgybcmaB766
CmaCh17G000040	Carg11101	Silver-seed gourd	carcmaB1488
CmaCh17G000040	Carg10228	Silver-seed gourd	carcmaB0314

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G000040	CmaCh08G009380	Cucurbita maxima (Rimu)	cmacmaB390

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G000040	Wild cucumber (PI 183967)	cmacpiB361
CmaCh17G000040	Cucumber (Chinese Long) v2	cmacuB357
CmaCh17G000040	Watermelon (97103) v1	cmawmB344
CmaCh17G000040	Bottle gourd (USVL1VR-Ls)	cmalsiB356
CmaCh17G000040	Cucumber (Gy14) v2	cgybcmaB345
CmaCh17G000040	Cucumber (Chinese Long) v3	cmacucB0425
CmaCh17G000040	Watermelon (97103) v2	cmawmbB366