CmoCh08G009070 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G009070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTCP family transcription factor
LocationCmo_Chr08 : 5906079 .. 5907104 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACCAAGGTCGAGGGCCGCGGCCGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTACCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

mRNA sequence

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACCAAGGTCGAGGGCCGCGGCCGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTACCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

Coding sequence (CDS)

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACCAAGGTCGAGGGCCGCGGCCGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTACCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA
Homology
[Close]
BLAST of CmoCh08G009070 vs. Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 9.0e-67
Identity = 186/365 (50.96%), Postives = 235/365 (64.38%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRM----NDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQ 60
           MA IQK E     D+     DL +     + ++SR       P Q +P  S +   P ++
Sbjct: 1   MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSR-------PFQVNPTVSLE---PKAE 60

Query: 61  IQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKS 120
             + +F+  +A   S  PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKS
Sbjct: 61  PVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKS 120

Query: 121 DGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKR 180
           DGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT+++ D   ++  KK+RKR
Sbjct: 121 DGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMG-ENLMKKKRKR 180

Query: 181 PANSDYVDVNDAVSVSVSNGVVHSGTSTT----------AAVQQALPPGFVPVWAIPSNA 240
           P+NS+Y+D++DA  VS S+G+    T+TT             QQ LP G  P+WAIPSNA
Sbjct: 181 PSNSEYIDISDA--VSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNA 240

Query: 241 IIP--GAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTA--RPISTVVSKADTSHIQSSTT 300
           +IP  GA F++P +A  S +PQL +FPA  A   +  A  +  ST+        + SS  
Sbjct: 241 MIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGF 300

Query: 301 NQSSSSSSASTSKSESVMAPISSSTVPTSSK-----TTTRMLRDFSLEIYDKKEL-QFMS 341
              S  S ++ S++ SVMAP SSS V T S      TTT  LRDFSLEIY+K+EL QFMS
Sbjct: 301 VSVSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMS 352

[Close]
BLAST of CmoCh08G009070 vs. Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-49
Identity = 137/308 (44.48%), Postives = 171/308 (55.52%), Query Frame = 1 

Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVHSGTSTTAA-VQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+     S     +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIP-------GAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKA 286
           W +              G ++ +P+VA               AP +N  ARP+S+ VS A
Sbjct: 200 WPMGMGTAFVTGGPDQMGQMWAIPTVAT--------------APFLNVGARPVSSYVSNA 259

Query: 287 DTSHIQSSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKEL 340
             +  +                             + TS   TT+ LRDFSLEIYDK+EL
Sbjct: 260 SDAEAE-----------------------------METSGGGTTQPLRDFSLEIYDKREL 284

[Close]
BLAST of CmoCh08G009070 vs. Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.5e-33
Identity = 97/198 (48.99%), Postives = 119/198 (60.10%), Query Frame = 1 

Query: 74  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 133
           PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PPPR--NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 134 ATGTGTIPAIAMSVNGTLKIPTTTSSNQDSA-------DQSAGKKRRKRPANSDYVDVND 193
           ATGTGT+PAIA +V+G L+IPT +SS+   A       ++S+ K+RRK            
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRK------------ 190

Query: 194 AVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACSST---R 253
              +  +  V  +    TAA     P  + PV A P      GA   VPS     T    
Sbjct: 191 ---LQPTRAVAGASPLATAA-----PAAYYPVIADPLLQGSGGAAISVPSGLAPITATGA 246

Query: 254 PQ----LFSFPAPGAPLV 258
           PQ    +F+ PA G+P V
Sbjct: 251 PQGLVPVFAVPATGSPAV 246

[Close]
BLAST of CmoCh08G009070 vs. Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.5e-33
Identity = 97/198 (48.99%), Postives = 119/198 (60.10%), Query Frame = 1 

Query: 74  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 133
           PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PPPR--NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 134 ATGTGTIPAIAMSVNGTLKIPTTTSSNQDSA-------DQSAGKKRRKRPANSDYVDVND 193
           ATGTGT+PAIA +V+G L+IPT +SS+   A       ++S+ K+RRK            
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRK------------ 190

Query: 194 AVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACSST---R 253
              +  +  V  +    TAA     P  + PV A P      GA   VPS     T    
Sbjct: 191 ---LQPTRAVAGASPLATAA-----PAAYYPVIADPLLQGSGGAAISVPSGLAPITATGA 246

Query: 254 PQ----LFSFPAPGAPLV 258
           PQ    +F+ PA G+P V
Sbjct: 251 PQGLVPVFAVPATGSPAV 246

[Close]
BLAST of CmoCh08G009070 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28
Identity = 78/148 (52.70%), Postives = 97/148 (65.54%), Query Frame = 1 

Query: 11  DDDDEDSPVTDLRMNDSDSSRMDLLALAPKQE-----DPDDSHDSDPPPSQIQVVNFAPE 70
           DD+ +  P        S SS   L +L   Q+         S  S P  +Q +++    E
Sbjct: 50  DDNHQQQP--------SPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEE 109

Query: 71  IAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 130
            A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL
Sbjct: 110 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 169

Query: 131 ERAEPAIIAATGTGTIPAIAMSVNGTLK 153
           ++AEP++IAATGTGTIPA   S+N +L+
Sbjct: 170 QQAEPSVIAATGTGTIPANFTSLNISLR 189

[Close]
BLAST of CmoCh08G009070 vs. TrEMBL
Match: A0A0A0KCU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G075180 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-127
Identity = 271/342 (79.24%), Postives = 291/342 (85.09%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE   DDD+DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQEL--DDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S     S  + ++AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSIS----ASNVAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVM 300
           SSTRPQLFSF  P APL+NTTARPIS   SKA+TSHIQSS TNQSSS+SS+S SKS+SVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           APISSS    S KTTT+MLRDFSLEIYDK+ELQFMS S+SKH
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

[Close]
BLAST of CmoCh08G009070 vs. TrEMBL
Match: A0A061DVP1_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_005447 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.6e-83
Identity = 213/365 (58.36%), Postives = 250/365 (68.49%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPK--QEDPDDSHDSDPPPSQIQ 60
           MA IQKQE   ++DED+   DL +N       D  A A K  +E+PD        P  + 
Sbjct: 1   MAAIQKQEV--EEDEDTRAVDLSINGGG----DAAAAASKNPKEEPDTEAAIGVMPMAVH 60

Query: 61  VVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGE 120
           V +  P    T     PKRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGE
Sbjct: 61  VPSAIPMPLVTAPPTAPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGE 120

Query: 121 TIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPAN 180
           TIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  DQS  KK+RKRPAN
Sbjct: 121 TIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDQS--KKKRKRPAN 180

Query: 181 SDYVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPP----GFVPVWAIPSNAIIPGAVFMV 240
           S+YVD+NDA  VSVS+G+    TS     QQ LPP    G VPVWAIPSNA++PGA FMV
Sbjct: 181 SEYVDINDA--VSVSSGLAPVITSQRRQQQQQLPPVLPQGLVPVWAIPSNAVVPGAFFMV 240

Query: 241 P---SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVS--------KADTSHIQSSTTNQ 300
           P   SVA  ST P LF+FPA   PL+N +ARPIS+ VS         A    +QS+    
Sbjct: 241 PPMTSVAGPSTEPHLFTFPATATPLINISARPISSFVSAMQHGVSIAATPGQLQSNVAVT 300

Query: 301 SSSSSSASTSKSESVMAP-------ISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSR 342
           SS+   + T K+ SVMAP       I+SS+  T++ TTT+MLRDFSLEIYDK+ELQFM+R
Sbjct: 301 SSTLPVSKTVKTTSVMAPSSSSAATITSSSASTTTTTTTQMLRDFSLEIYDKQELQFMTR 354

[Close]
BLAST of CmoCh08G009070 vs. TrEMBL
Match: A0A0D2SH07_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G094200 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 9.3e-79
Identity = 198/349 (56.73%), Postives = 240/349 (68.77%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MA I K E  +D D  + V  +      +   +     PK+E PD        P+ + V 
Sbjct: 1   MAAIHKLEVEEDADPRAVVLSINGGGDAAPSKN-----PKEE-PDIDTTLGAMPTAVHVP 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           +  P    T +   PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  SGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  D S  KK+ KRPANS+
Sbjct: 121 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDPS--KKKHKRPANSE 180

Query: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQA--LPPGFVPVWAIPSNAIIPGAVFMVP--- 240
           YVD+NDA  VSVS+G+    T      QQA  LP G VP+WAIPSN ++PGA FMVP   
Sbjct: 181 YVDINDA--VSVSSGLAPVVTPQQQQQQQAAVLPQGLVPIWAIPSNTVVPGAFFMVPPMA 240

Query: 241 SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVS---KADTSHIQSSTTNQSSSSSSAST 300
           S+A  ST+P +F+FPA   P++N +ARPIS+ VS    A  S +QS+    S +   +  
Sbjct: 241 SMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVAVTSCTVPVSKA 300

Query: 301 SKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           +K+ SVMAP SSS    ++ TTT+MLRDFSLEIYDK+ELQFM+RS SKH
Sbjct: 301 AKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRS-SKH 338

[Close]
BLAST of CmoCh08G009070 vs. TrEMBL
Match: B9IC90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07450g PE=4 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 5.1e-77
Identity = 187/360 (51.94%), Postives = 237/360 (65.83%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSD----------SSRMDLLALAPKQEDPDDSHDS 60
           +A +QKQE  +D        DLR+N  +              + ++ APK+E   +    
Sbjct: 49  VAPVQKQELGED--ASMTTADLRINSGELRNIRGGPTNKKNYNDMSAAPKEEPCTEDRSP 108

Query: 61  DPPPSQIQVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRE 120
            PP   + VV FA       +V PPKRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRE
Sbjct: 109 TPP---LAVVPFAAIPMPLTTVTPPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRE 168

Query: 121 LGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGK 180
           LGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSS+ +  D+   K
Sbjct: 169 LGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSAE-PDEPNAK 228

Query: 181 KRRKRPANSDYVDVNDAVSVSVSNGVVHSGTSTTAAVQ-----QALPPGFVPVWAIPSNA 240
           K+RKRPANS+YVDVND+VSVS S   + +        Q      A+P G VP+WAIPSN 
Sbjct: 229 KKRKRPANSEYVDVNDSVSVSASLAPITTRPRQPPQPQAQQPVAAVPQGLVPMWAIPSNT 288

Query: 241 IIPGAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTS-----HIQSST 300
           ++PGA FMVPS+     +PQ+F+FPA  +PL+N + RPIS+ VS   ++      +  S 
Sbjct: 289 VVPGAFFMVPSMPGPFNQPQIFTFPAAASPLINISPRPISSFVSSMQSNIAVALPVSGSK 348

Query: 301 TNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASK 341
             +  S ++ S+S + ++  P       T++ +T  MLRDFSLEIYDK+ELQFMSRS+ +
Sbjct: 349 PGKGISRTAPSSSSAHTIRTP------STTTNSTPHMLRDFSLEIYDKQELQFMSRSSKQ 396

[Close]
BLAST of CmoCh08G009070 vs. TrEMBL
Match: B9GPT7_POPTR (TCP family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0002s15360g PE=4 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 3.3e-76
Identity = 199/360 (55.28%), Postives = 236/360 (65.56%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDL----------LALAPKQEDPDDSHDS 60
           MA +QKQE  +D  ED    DLR+N  + S +            +++A K+E   +    
Sbjct: 1   MASMQKQELGED--EDMRTVDLRINSRELSNIRARPTNRKDCNDMSVALKEEPSTEERSP 60

Query: 61  DPPPSQIQVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRE 120
            PP   + V+  A       +V P KR STKDRHTKVEGRGRRIR+PA CAARIFQLTRE
Sbjct: 61  TPP---LGVMPLAAVSVPLTTVTPLKRPSTKDRHTKVEGRGRRIRMPAACAARIFQLTRE 120

Query: 121 LGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGK 180
           LG+KSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIP TT+S+      +A  
Sbjct: 121 LGYKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPITTNSSSGLGQPNA-T 180

Query: 181 KRRKRPANSDYVDVNDAVSVSVSNGVV-----HSGTSTTAAVQQ---ALPPGFVPVWAIP 240
           K RKRPANS+YVDVND VSVS S   V      S        QQ   A+P G VP+WAIP
Sbjct: 181 KNRKRPANSEYVDVNDTVSVSASLAPVTTQQPQSQPQLPPQPQQTVAAVPQGLVPMWAIP 240

Query: 241 SNAIIPGAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTN 300
           SNA++PGA FMVPS+A  S +PQ+F+FPA   PL+N +ARPIS+ VS         S   
Sbjct: 241 SNAVVPGAFFMVPSIAGPSNQPQIFTFPAAATPLINISARPISSFVSS------MQSNMA 300

Query: 301 QSSSSSSASTSKSESVMAPISSS--TVPTSSKTTTR---MLRDFSLEIYDKKELQFMSRS 338
            +   S + T+K  S+MAP SSS  TV T+S TT R   MLRDFSLEIYDK+ELQFMSRS
Sbjct: 301 VAVPVSGSMTAKGISMMAPSSSSACTVSTTSTTTNRTPQMLRDFSLEIYDKQELQFMSRS 348

[Close]
BLAST of CmoCh08G009070 vs. TAIR10
Match: AT2G45680.1 (AT2G45680.1 TCP family transcription factor )

HSP 1 Score: 255.4 bits (651), Expect = 5.1e-68
Identity = 186/365 (50.96%), Postives = 235/365 (64.38%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRM----NDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQ 60
           MA IQK E     D+     DL +     + ++SR       P Q +P  S +   P ++
Sbjct: 1   MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSR-------PFQVNPTVSLE---PKAE 60

Query: 61  IQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKS 120
             + +F+  +A   S  PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKS
Sbjct: 61  PVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKS 120

Query: 121 DGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKR 180
           DGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT+++ D   ++  KK+RKR
Sbjct: 121 DGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMG-ENLMKKKRKR 180

Query: 181 PANSDYVDVNDAVSVSVSNGVVHSGTSTT----------AAVQQALPPGFVPVWAIPSNA 240
           P+NS+Y+D++DA  VS S+G+    T+TT             QQ LP G  P+WAIPSNA
Sbjct: 181 PSNSEYIDISDA--VSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNA 240

Query: 241 IIP--GAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTA--RPISTVVSKADTSHIQSSTT 300
           +IP  GA F++P +A  S +PQL +FPA  A   +  A  +  ST+        + SS  
Sbjct: 241 MIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGF 300

Query: 301 NQSSSSSSASTSKSESVMAPISSSTVPTSSK-----TTTRMLRDFSLEIYDKKEL-QFMS 341
              S  S ++ S++ SVMAP SSS V T S      TTT  LRDFSLEIY+K+EL QFMS
Sbjct: 301 VSVSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMS 352

[Close]
BLAST of CmoCh08G009070 vs. TAIR10
Match: AT5G51910.1 (AT5G51910.1 TCP family transcription factor )

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-51
Identity = 137/308 (44.48%), Postives = 171/308 (55.52%), Query Frame = 1 

Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVHSGTSTTAA-VQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+     S     +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIP-------GAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKA 286
           W +              G ++ +P+VA               AP +N  ARP+S+ VS A
Sbjct: 200 WPMGMGTAFVTGGPDQMGQMWAIPTVAT--------------APFLNVGARPVSSYVSNA 259

Query: 287 DTSHIQSSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKEL 340
             +  +                             + TS   TT+ LRDFSLEIYDK+EL
Sbjct: 260 SDAEAE-----------------------------METSGGGTTQPLRDFSLEIYDKREL 284

[Close]
BLAST of CmoCh08G009070 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29
Identity = 78/148 (52.70%), Postives = 97/148 (65.54%), Query Frame = 1 

Query: 11  DDDDEDSPVTDLRMNDSDSSRMDLLALAPKQE-----DPDDSHDSDPPPSQIQVVNFAPE 70
           DD+ +  P        S SS   L +L   Q+         S  S P  +Q +++    E
Sbjct: 50  DDNHQQQP--------SPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEE 109

Query: 71  IAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 130
            A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL
Sbjct: 110 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 169

Query: 131 ERAEPAIIAATGTGTIPAIAMSVNGTLK 153
           ++AEP++IAATGTGTIPA   S+N +L+
Sbjct: 170 QQAEPSVIAATGTGTIPANFTSLNISLR 189

[Close]
BLAST of CmoCh08G009070 vs. TAIR10
Match: AT3G27010.1 (AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-29
Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 73  LPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAII 132
           L PKR+S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+II
Sbjct: 71  LGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 130

Query: 133 AATGTGTIPAIAMSVN---------GTLKIPTTTSSNQDSADQSAGK 171
           AATG+GTIPA A++ +         G+L      S + D    S+G+
Sbjct: 131 AATGSGTIPASALASSAATSNHHQGGSLTAGLMISHDLDGGSSSSGR 177

[Close]
BLAST of CmoCh08G009070 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 85/209 (40.67%), Postives = 113/209 (54.07%), Query Frame = 1 

Query: 43  DPDDSHDSDPP-----------PSQIQVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRG 102
           DPD +H  + P            + + +++   E        PPKR STKDRHTKVEGRG
Sbjct: 4   DPDHNHRPNFPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRG 63

Query: 103 RRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTL 162
           RRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA+IAATGTGTIPA   S+N +L
Sbjct: 64  RRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISL 123

Query: 163 K----------IPTTTS-----SNQDSADQSAGKKRRKRPANSDYVDVNDAVSVSVSNGV 222
           +          + TT S     S   S       + + RP N  +   + +  +   N +
Sbjct: 124 RSSRSSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKNESHSSSSSSSQLLDHNQM 183

Query: 223 -VHSGTSTTAAVQQALPPGFVPVWAIPSN 225
             +   ST  ++  +  P   P W+   N
Sbjct: 184 GNYLVQSTAGSLPTSQSPATAPFWSSGDN 212

[Close]
BLAST of CmoCh08G009070 vs. NCBI nr
Match: gi|659120353|ref|XP_008460149.1| (PREDICTED: transcription factor TCP9 [Cucumis melo])

HSP 1 Score: 470.7 bits (1210), Expect = 2.2e-129
Identity = 272/342 (79.53%), Postives = 293/342 (85.67%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE   DDD+DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQEL--DDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSS-NQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSS NQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S     S  + + AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSISA----SNVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVM 300
           SSTRPQLFSF AP AP++NTTARPIS   SK DTSHIQSS TNQSSS+SS+S SKS+SVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           APISSS+V  S KTTT+MLRDFSLEIYDK+ELQFM+RS+SKH
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSKH 329

[Close]
BLAST of CmoCh08G009070 vs. NCBI nr
Match: gi|449454616|ref|XP_004145050.1| (PREDICTED: transcription factor TCP9 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 2.0e-127
Identity = 271/342 (79.24%), Postives = 291/342 (85.09%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE   DDD+DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQEL--DDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S     S  + ++AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSIS----ASNVAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVM 300
           SSTRPQLFSF  P APL+NTTARPIS   SKA+TSHIQSS TNQSSS+SS+S SKS+SVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           APISSS    S KTTT+MLRDFSLEIYDK+ELQFMS S+SKH
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

[Close]
BLAST of CmoCh08G009070 vs. NCBI nr
Match: gi|590722682|ref|XP_007051964.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 317.8 bits (813), Expect = 2.3e-83
Identity = 213/365 (58.36%), Postives = 250/365 (68.49%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPK--QEDPDDSHDSDPPPSQIQ 60
           MA IQKQE   ++DED+   DL +N       D  A A K  +E+PD        P  + 
Sbjct: 1   MAAIQKQEV--EEDEDTRAVDLSINGGG----DAAAAASKNPKEEPDTEAAIGVMPMAVH 60

Query: 61  VVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGE 120
           V +  P    T     PKRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGE
Sbjct: 61  VPSAIPMPLVTAPPTAPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGE 120

Query: 121 TIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPAN 180
           TIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  DQS  KK+RKRPAN
Sbjct: 121 TIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDQS--KKKRKRPAN 180

Query: 181 SDYVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPP----GFVPVWAIPSNAIIPGAVFMV 240
           S+YVD+NDA  VSVS+G+    TS     QQ LPP    G VPVWAIPSNA++PGA FMV
Sbjct: 181 SEYVDINDA--VSVSSGLAPVITSQRRQQQQQLPPVLPQGLVPVWAIPSNAVVPGAFFMV 240

Query: 241 P---SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVS--------KADTSHIQSSTTNQ 300
           P   SVA  ST P LF+FPA   PL+N +ARPIS+ VS         A    +QS+    
Sbjct: 241 PPMTSVAGPSTEPHLFTFPATATPLINISARPISSFVSAMQHGVSIAATPGQLQSNVAVT 300

Query: 301 SSSSSSASTSKSESVMAP-------ISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSR 342
           SS+   + T K+ SVMAP       I+SS+  T++ TTT+MLRDFSLEIYDK+ELQFM+R
Sbjct: 301 SSTLPVSKTVKTTSVMAPSSSSAATITSSSASTTTTTTTQMLRDFSLEIYDKQELQFMTR 354

[Close]
BLAST of CmoCh08G009070 vs. NCBI nr
Match: gi|823186387|ref|XP_012489844.1| (PREDICTED: transcription factor TCP9 [Gossypium raimondii])

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78
Identity = 198/349 (56.73%), Postives = 240/349 (68.77%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MA I K E  +D D  + V  +      +   +     PK+E PD        P+ + V 
Sbjct: 52  MAAIHKLEVEEDADPRAVVLSINGGGDAAPSKN-----PKEE-PDIDTTLGAMPTAVHVP 111

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           +  P    T +   PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 112 SGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 171

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  D S  KK+ KRPANS+
Sbjct: 172 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDPS--KKKHKRPANSE 231

Query: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQA--LPPGFVPVWAIPSNAIIPGAVFMVP--- 240
           YVD+NDA  VSVS+G+    T      QQA  LP G VP+WAIPSN ++PGA FMVP   
Sbjct: 232 YVDINDA--VSVSSGLAPVVTPQQQQQQQAAVLPQGLVPIWAIPSNTVVPGAFFMVPPMA 291

Query: 241 SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVS---KADTSHIQSSTTNQSSSSSSAST 300
           S+A  ST+P +F+FPA   P++N +ARPIS+ VS    A  S +QS+    S +   +  
Sbjct: 292 SMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVAVTSCTVPVSKA 351

Query: 301 SKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           +K+ SVMAP SSS    ++ TTT+MLRDFSLEIYDK+ELQFM+RS SKH
Sbjct: 352 AKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRS-SKH 389

[Close]
BLAST of CmoCh08G009070 vs. NCBI nr
Match: gi|763774068|gb|KJB41191.1| (hypothetical protein B456_007G094200 [Gossypium raimondii])

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78
Identity = 198/349 (56.73%), Postives = 240/349 (68.77%), Query Frame = 1 

Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MA I K E  +D D  + V  +      +   +     PK+E PD        P+ + V 
Sbjct: 1   MAAIHKLEVEEDADPRAVVLSINGGGDAAPSKN-----PKEE-PDIDTTLGAMPTAVHVP 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           +  P    T +   PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  SGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  D S  KK+ KRPANS+
Sbjct: 121 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDPS--KKKHKRPANSE 180

Query: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQA--LPPGFVPVWAIPSNAIIPGAVFMVP--- 240
           YVD+NDA  VSVS+G+    T      QQA  LP G VP+WAIPSN ++PGA FMVP   
Sbjct: 181 YVDINDA--VSVSSGLAPVVTPQQQQQQQAAVLPQGLVPIWAIPSNTVVPGAFFMVPPMA 240

Query: 241 SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVS---KADTSHIQSSTTNQSSSSSSAST 300
           S+A  ST+P +F+FPA   P++N +ARPIS+ VS    A  S +QS+    S +   +  
Sbjct: 241 SMAGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQSNVAVTSCTVPVSKA 300

Query: 301 SKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           +K+ SVMAP SSS    ++ TTT+MLRDFSLEIYDK+ELQFM+RS SKH
Sbjct: 301 AKTTSVMAPSSSSAASATTTTTTQMLRDFSLEIYDKQELQFMTRS-SKH 338

The following BLAST results are available for this feature:
BLAST of CmoCh08G009070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP9_ARATH9.0e-6750.96Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=1 SV=1[more]
TCP19_ARATH1.3e-4944.48Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1[more]
PCF2_ORYSI6.5e-3348.99Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=3 SV=1[more]
PCF2_ORYSJ6.5e-3348.99Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1[more]
TCP14_ARATH2.2e-2852.70Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1[more]
BLAST of CmoCh08G009070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCU1_CUCSA1.4e-12779.24Uncharacterized protein OS=Cucumis sativus GN=Csa_6G075180 PE=4 SV=1[more]
A0A061DVP1_THECC1.6e-8358.36TCP family transcription factor OS=Theobroma cacao GN=TCM_005447 PE=4 SV=1[more]
A0A0D2SH07_GOSRA9.3e-7956.73Uncharacterized protein OS=Gossypium raimondii GN=B456_007G094200 PE=4 SV=1[more]
B9IC90_POPTR5.1e-7751.94Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07450g PE=4 SV=2[more]
B9GPT7_POPTR3.3e-7655.28TCP family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0... [more]
BLAST of CmoCh08G009070 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45680.15.1e-6850.96 TCP family transcription factor [more]
AT5G51910.17.3e-5144.48 TCP family transcription factor [more]
AT3G47620.11.2e-2952.70 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14[more]
AT3G27010.14.6e-2962.62 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20[more]
AT1G69690.11.0e-2840.67 TCP family transcription factor [more]
BLAST of CmoCh08G009070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120353|ref|XP_008460149.1|2.2e-12979.53PREDICTED: transcription factor TCP9 [Cucumis melo][more]
gi|449454616|ref|XP_004145050.1|2.0e-12779.24PREDICTED: transcription factor TCP9 [Cucumis sativus][more]
gi|590722682|ref|XP_007051964.1|2.3e-8358.36TCP family transcription factor [Theobroma cacao][more]
gi|823186387|ref|XP_012489844.1|1.3e-7856.73PREDICTED: transcription factor TCP9 [Gossypium raimondii][more]
gi|763774068|gb|KJB41191.1|1.3e-7856.73hypothetical protein B456_007G094200 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044699 single-organism process
biological_process GO:0048513 animal organ development
biological_process GO:0009987 cellular process
biological_process GO:0050789 regulation of biological process
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G009070.1CmoCh08G009070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 79..173
score: 5.7
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 80..134
score: 26
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 69..327
score: 5.0
NoneNo IPR availablePANTHERPTHR31072:SF10TRANSCRIPTION FACTOR TCP9coord: 69..327
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G009070Cucsa.363020Cucumber (Gy14) v1cgycmoB1013
CmoCh08G009070CmaCh17G000040Cucurbita maxima (Rimu)cmacmoB382
CmoCh08G009070CmaCh08G009380Cucurbita maxima (Rimu)cmacmoB912
CmoCh08G009070Cla006939Watermelon (97103) v1cmowmB862
CmoCh08G009070Cla006219Watermelon (97103) v1cmowmB859
CmoCh08G009070Csa6G075180Cucumber (Chinese Long) v2cmocuB880
CmoCh08G009070MELO3C022520Melon (DHL92) v3.5.1cmomeB806
CmoCh08G009070MELO3C006863Melon (DHL92) v3.5.1cmomeB835
CmoCh08G009070ClCG06G000180Watermelon (Charleston Gray)cmowcgB796
CmoCh08G009070CSPI03G16480Wild cucumber (PI 183967)cmocpiB891
CmoCh08G009070CSPI06G05640Wild cucumber (PI 183967)cmocpiB893
CmoCh08G009070Lsi09G019210Bottle gourd (USVL1VR-Ls)cmolsiB804
CmoCh08G009070Cp4.1LG12g00170Cucurbita pepo (Zucchini)cmocpeB845
CmoCh08G009070Cp4.1LG17g02400Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G009070MELO3C006863.2Melon (DHL92) v3.6.1cmomedB944
CmoCh08G009070MELO3C022520.2Melon (DHL92) v3.6.1cmomedB909
CmoCh08G009070CsaV3_6G005960Cucumber (Chinese Long) v3cmocucB1047
CmoCh08G009070CsaV3_3G016680Cucumber (Chinese Long) v3cmocucB1041
CmoCh08G009070Cla97C06G109440Watermelon (97103) v2cmowmbB892
CmoCh08G009070BhiUN123G61Wax gourdcmowgoB1134
CmoCh08G009070Bhi01G001009Wax gourdcmowgoB1107
CmoCh08G009070CsGy6G005570Cucumber (Gy14) v2cgybcmoB846
CmoCh08G009070CsGy3G016590Cucumber (Gy14) v2cgybcmoB432
CmoCh08G009070Carg10228Silver-seed gourdcarcmoB0325
CmoCh08G009070Carg11101Silver-seed gourdcarcmoB1452
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G009070CmoCh16G001620Cucurbita moschata (Rifu)cmocmoB297
CmoCh08G009070CmoCh17G000060Cucurbita moschata (Rifu)cmocmoB326
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G009070Cucumber (Gy14) v2cgybcmoB426
CmoCh08G009070Melon (DHL92) v3.6.1cmomedB941
CmoCh08G009070Silver-seed gourdcarcmoB0326
CmoCh08G009070Silver-seed gourdcarcmoB0853
CmoCh08G009070Cucumber (Chinese Long) v3cmocucB1036
CmoCh08G009070Watermelon (97103) v2cmowmbB888
CmoCh08G009070Cucurbita moschata (Rifu)cmocmoB235
CmoCh08G009070Cucurbita moschata (Rifu)cmocmoB314
CmoCh08G009070Cucurbita moschata (Rifu)cmocmoB486
CmoCh08G009070Cucumber (Gy14) v1cgycmoB0722
CmoCh08G009070Cucurbita maxima (Rimu)cmacmoB281
CmoCh08G009070Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G009070Cucurbita maxima (Rimu)cmacmoB839
CmoCh08G009070Wild cucumber (PI 183967)cmocpiB886
CmoCh08G009070Cucumber (Chinese Long) v2cmocuB875
CmoCh08G009070Melon (DHL92) v3.5.1cmomeB833
CmoCh08G009070Watermelon (Charleston Gray)cmowcgB793
CmoCh08G009070Watermelon (97103) v1cmowmB857
CmoCh08G009070Cucurbita pepo (Zucchini)cmocpeB833