Carg11101 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11101
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor TCP9
Location	Cucurbita_argyrosperma_scaffold_027 : 1017526 .. 1018551 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACTAAGGTCGAGGGCCGCGGCAGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTAGCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

mRNA sequence

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACTAAGGTCGAGGGCCGCGGCAGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTAGCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

Coding sequence (CDS)

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACTAAGGTCGAGGGCCGCGGCAGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTAGCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

Protein sequence

MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSDYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH

Homology

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BLAST of Carg11101 vs. NCBI nr
Match: XP_022964565.1 (transcription factor TCP9 [Cucurbita moschata])

HSP 1 Score: 553.5 bits (1425), Expect = 4.9e-154
Identity = 340/341 (99.71%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV
Sbjct: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 341

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BLAST of Carg11101 vs. NCBI nr
Match: XP_023515272.1 (transcription factor TCP9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152
Identity = 335/341 (98.24%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDD   DSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSD PPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDLPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQS GKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSVGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: XP_022999831.1 (transcription factor TCP9 [Cucurbita maxima])

HSP 1 Score: 547.7 bits (1410), Expect = 2.7e-152
Identity = 335/341 (98.24%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDD   DSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSD PPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDLPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX 300
           STRPQLFSFPAPG PLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 STRPQLFSFPAPGPPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 XXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: XP_008460149.1 (PREDICTED: transcription factor TCP9 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.9e-113
Identity = 261/342 (76.32%), Postives = 278/342 (81.29%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE +DD   DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQELDDD--DDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S     S  + + AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSIS----ASNVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXX 300
           SSTRPQLFSF AP AP++NTTARPIS   SK DTSHI     XXXXXXXXXXXXXXXXXX
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XX              +MLRDFSLEIYDK+ELQFM+RS+SKH
Sbjct: 301 XXISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSKH 329

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: XP_004145050.1 (PREDICTED: transcription factor TCP9 [Cucumis sativus] >KGN46217.1 hypothetical protein Csa_6G075180 [Cucumis sativus])

HSP 1 Score: 414.5 bits (1064), Expect = 3.6e-112
Identity = 268/342 (78.36%), Postives = 283/342 (82.75%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE +DD   DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQELDDD--DDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S   V +GSS   AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSISASNV-AGSS---AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXX 300
           SSTRPQLFSF  P APL+NTTARPIS   SKA+TSHI        XXXXXXXXXXXXXXX
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHI----QSSPXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXX       +MLRDFSLEIYDK+ELQFMS S+SKH
Sbjct: 301 XXXXXXXXXSSGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

[Close]

BLAST of Carg11101 vs. TAIR10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 240.0 bits (611), Expect = 2.2e-63
Identity = 173/311 (55.63%), Postives = 210/311 (67.52%), Query Frame = 0


Query: 53  PPSQIQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTREL 112
           P ++  + +F+  +A   S  PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTREL
Sbjct: 47  PKAEPVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTREL 106

Query: 113 GHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKK 172
           GHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT+++ D   ++  KK
Sbjct: 107 GHKSDGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMG-ENLMKK 166

Query: 173 RRKRPANSDYVDVNDAVSVSVSNGVVHSGSSTT----------AAVQQALPPGFVPVWAI 232
           +RKRP+NS+Y+D++DA  VS S+G+    ++TT             QQ LP G  P+WAI
Sbjct: 167 KRKRPSNSEYIDISDA--VSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAI 226

Query: 233 PSNAIIP--GAVFMVPSVACSSTRPQLFSFPAPGA---------PLVNTTARPISTVVSK 292
           PSNA+IP  GA F++P +A  S +PQL +FPA  A            +T ARP    V  
Sbjct: 227 PSNAMIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQV-- 286

Query: 293 ADTSHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKE 341
             +S                      XXXXXXXXXXXXXXXXXXX  LRDFSLEIY+K+E
Sbjct: 287 VPSSGFVSVSDVSGSNLSRATSVMAPXXXXXXXXXXXXXXXXXXXHTLRDFSLEIYEKQE 346

[Close]

BLAST of Carg11101 vs. TAIR10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-49
Identity = 133/302 (44.04%), Postives = 167/302 (55.30%), Query Frame = 0


Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVH-SGSSTTAAVQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+   + S+    +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPG-APLVNTTARPISTVVSKADTSHIX 286
           W +       G  F+           Q+++ P    AP +N  ARP+S+ VS A  +   
Sbjct: 200 WPMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSYVSNASDAE-- 259

Query: 287 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRS 340
                                                 + LRDFSLEIYDK+ELQF+  S
Sbjct: 260 ---------------------------AEMETSGGGTTQPLRDFSLEIYDKRELQFLGGS 284

[Close]

BLAST of Carg11101 vs. TAIR10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-30
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 55  SQIQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGH 114
           +Q +++    E A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGH
Sbjct: 91  TQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGH 150

Query: 115 KSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLK 153
           KSDGETI WLL++AEP++IAATGTGTIPA   S+N +L+
Sbjct: 151 KSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLR 189

[Close]

BLAST of Carg11101 vs. TAIR10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 61/74 (82.43%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 73  LPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAII 132
           L PKR+S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+II
Sbjct: 71  LGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 130

Query: 133 AATGTGTIPAIAMS 147
           AATG+GTIPA A++
Sbjct: 131 AATGSGTIPASALA 144

[Close]

BLAST of Carg11101 vs. TAIR10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-28
Identity = 59/73 (80.82%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 80  TKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGT 139
           TKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA+IAATGTGT
Sbjct: 52  TKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT 111

Query: 140 IPAIAMSVNGTLK 153
           IPA   S+N +L+
Sbjct: 112 IPANFTSLNISLR 124

[Close]

BLAST of Carg11101 vs. Swiss-Prot
Match: sp|O64647|TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.0e-62
Identity = 173/311 (55.63%), Postives = 210/311 (67.52%), Query Frame = 0


Query: 53  PPSQIQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTREL 112
           P ++  + +F+  +A   S  PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTREL
Sbjct: 47  PKAEPVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTREL 106

Query: 113 GHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKK 172
           GHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT+++ D   ++  KK
Sbjct: 107 GHKSDGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMG-ENLMKK 166

Query: 173 RRKRPANSDYVDVNDAVSVSVSNGVVHSGSSTT----------AAVQQALPPGFVPVWAI 232
           +RKRP+NS+Y+D++DA  VS S+G+    ++TT             QQ LP G  P+WAI
Sbjct: 167 KRKRPSNSEYIDISDA--VSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAI 226

Query: 233 PSNAIIP--GAVFMVPSVACSSTRPQLFSFPAPGA---------PLVNTTARPISTVVSK 292
           PSNA+IP  GA F++P +A  S +PQL +FPA  A            +T ARP    V  
Sbjct: 227 PSNAMIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQV-- 286

Query: 293 ADTSHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKE 341
             +S                      XXXXXXXXXXXXXXXXXXX  LRDFSLEIY+K+E
Sbjct: 287 VPSSGFVSVSDVSGSNLSRATSVMAPXXXXXXXXXXXXXXXXXXXHTLRDFSLEIYEKQE 346

[Close]

BLAST of Carg11101 vs. Swiss-Prot
Match: sp|Q9LT89|TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-48
Identity = 133/302 (44.04%), Postives = 167/302 (55.30%), Query Frame = 0


Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVH-SGSSTTAAVQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+   + S+    +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPG-APLVNTTARPISTVVSKADTSHIX 286
           W +       G  F+           Q+++ P    AP +N  ARP+S+ VS A  +   
Sbjct: 200 WPMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSYVSNASDAE-- 259

Query: 287 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRS 340
                                                 + LRDFSLEIYDK+ELQF+  S
Sbjct: 260 ---------------------------AEMETSGGGTTQPLRDFSLEIYDKRELQFLGGS 284

[Close]

BLAST of Carg11101 vs. Swiss-Prot
Match: sp|Q93Z00|TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.8e-29
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 55  SQIQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGH 114
           +Q +++    E A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGH
Sbjct: 91  TQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGH 150

Query: 115 KSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLK 153
           KSDGETI WLL++AEP++IAATGTGTIPA   S+N +L+
Sbjct: 151 KSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLR 189

[Close]

BLAST of Carg11101 vs. Swiss-Prot
Match: sp|A2YXQ1|PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 91/191 (47.64%), Postives = 106/191 (55.50%), Query Frame = 0


Query: 74  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 133
           PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PPPR--NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 134 ATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSDYVDVNDAVSVSVS 193
           ATGTGT+PAIA +V+G L+IPT                               AV     
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQXXXXXXXXXXXXXXXXXXXXXXXXXXQPTRAV----- 190

Query: 194 NGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACSST---RPQ----L 253
                +G+S  A    A P  + PV A P      GA   VPS     T    PQ    +
Sbjct: 191 -----AGASPLAT---AAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQXLVXV 246

Query: 254 FSFPAPGAPLV 258
           F+ PA G+P V
Sbjct: 251 FAVPATGSPAV 246

[Close]

BLAST of Carg11101 vs. Swiss-Prot
Match: sp|Q6ZBH6|PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 91/191 (47.64%), Postives = 106/191 (55.50%), Query Frame = 0


Query: 74  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 133
           PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PPPR--NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 134 ATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSDYVDVNDAVSVSVS 193
           ATGTGT+PAIA +V+G L+IPT                               AV     
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQXXXXXXXXXXXXXXXXXXXXXXXXXXQPTRAV----- 190

Query: 194 NGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACSST---RPQ----L 253
                +G+S  A    A P  + PV A P      GA   VPS     T    PQ    +
Sbjct: 191 -----AGASPLAT---AAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQXLVXV 246

Query: 254 FSFPAPGAPLV 258
           F+ PA G+P V
Sbjct: 251 FAVPATGSPAV 246

[Close]

BLAST of Carg11101 vs. TrEMBL
Match: tr|A0A1S3CBF3|A0A1S3CBF3_CUCME (transcription factor TCP9 OS=Cucumis melo OX=3656 GN=LOC103499048 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.3e-113
Identity = 261/342 (76.32%), Postives = 278/342 (81.29%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE +DD   DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQELDDD--DDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S     S  + + AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSIS----ASNVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXX 300
           SSTRPQLFSF AP AP++NTTARPIS   SK DTSHI     XXXXXXXXXXXXXXXXXX
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XX              +MLRDFSLEIYDK+ELQFM+RS+SKH
Sbjct: 301 XXISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSKH 329

[Close]

BLAST of Carg11101 vs. TrEMBL
Match: tr|A0A0A0KCU1|A0A0A0KCU1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G075180 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.4e-112
Identity = 268/342 (78.36%), Postives = 283/342 (82.75%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE +DD   DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQELDDD--DDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S   V +GSS   AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSISASNV-AGSS---AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXXXXXXXXXXXXXXXXXXX 300
           SSTRPQLFSF  P APL+NTTARPIS   SKA+TSHI        XXXXXXXXXXXXXXX
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHI----QSSPXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXX       +MLRDFSLEIYDK+ELQFMS S+SKH
Sbjct: 301 XXXXXXXXXSSGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

[Close]

BLAST of Carg11101 vs. TrEMBL
Match: tr|B9GPT7|B9GPT7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G152200v3 PE=4 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 2.4e-72
Identity = 195/355 (54.93%), Postives = 231/355 (65.07%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRM----------DLLALAPKQEDPDDSHDS 60
           MA +QKQE  +D   D    DLR+N  + S +          + +++A K+E   +    
Sbjct: 1   MASMQKQELGED--EDMRTVDLRINSRELSNIRARPTNRKDCNDMSVALKEEPSTEERSP 60

Query: 61  DPPPSQIQVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRE 120
            PP   + V+  A       +V P KR STKDRHTKVEGRGRRIR+PA CAARIFQLTRE
Sbjct: 61  TPP---LGVMPLAAVSVPLTTVTPLKRPSTKDRHTKVEGRGRRIRMPAACAARIFQLTRE 120

Query: 121 LGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGK 180
           LG+KSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIP TT+S+      +A  
Sbjct: 121 LGYKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPITTNSSSGLGQPNA-T 180

Query: 181 KRRKRPANSDYVDVNDAVSVSVSNGVV-----HSGSSTTAAVQQ---ALPPGFVPVWAIP 240
           K RKRPANS+YVDVND VSVS S   V      S        QQ   A+P G VP+WAIP
Sbjct: 181 KNRKRPANSEYVDVNDTVSVSASLAPVTTQQPQSQPQLPXXPQQTVAAVPQGLVPMWAIP 240

Query: 241 SNAIIPGAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIXXXXXX 300
           SNA++PGA FMVPS+A  S +PQ+F+FPA   PL+N +ARPIS+ VS    S++      
Sbjct: 241 SNAVVPGAFFMVPSIAGPSNQPQIFTFPAAATPLINISARPISSFVSSMQ-SNMAVAVPV 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRS 338
                           XXXXXXXXXXXXXX   +MLRDFSLEIYDK+ELQFMSRS
Sbjct: 301 SGSMTAKGISMMAPSSXXXXXXXXXXXXXXRTPQMLRDFSLEIYDKQELQFMSRS 348

[Close]

BLAST of Carg11101 vs. TrEMBL
Match: tr|A0A1U8JYW8|A0A1U8JYW8_GOSHI (transcription factor TCP9 OS=Gossypium hirsutum OX=3635 GN=LOC107911937 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 201/347 (57.93%), Postives = 232/347 (66.86%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MA I K E  +D   D     L +N       D+      +E+PD        P+ + V 
Sbjct: 1   MAAIHKLEVEED--ADPRAVVLSINGGG----DVAPSKNPKEEPDIDTTLGAMPTAVHVP 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           +  P    T +   PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  SGVPVPPVTAAPAAPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  D S  KK+ KRPANS+
Sbjct: 121 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDPS--KKKHKRPANSE 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVP---SV 240
           YVD+NDAVSVS     V             LP G VP+WAIPSN ++PGA FMVP   S+
Sbjct: 181 YVDINDAVSVSSGLAPVVXXXXXXXXXXXXLPQGLVPIWAIPSNTVVPGAFFMVPPMASM 240

Query: 241 ACSSTRPQLFSFPAPGAPLVNTTARPISTVVS---KADTSHIXXXXXXXXXXXXXXXXXX 300
           A  ST+P +F+FPA   P++N +ARPIS+ VS    A  S +                XX
Sbjct: 241 AGPSTQPHIFTFPATATPVINISARPISSFVSAMQAATPSQLQNNVAVTSCTVPVSKAXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXXXXXXXXXXXXXX  LRDFSLEIYDK+ELQFM+RS SKH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXLRDFSLEIYDKQELQFMTRS-SKH 338

[Close]

BLAST of Carg11101 vs. TrEMBL
Match: tr|A0A2P5WWM8|A0A2P5WWM8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA25192 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 199/347 (57.35%), Postives = 230/347 (66.28%), Query Frame = 0


Query: 1   MADIQKQEYNDDXXXDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MA I K E  +D    + V  +      S   D       +E+PD        P  + V 
Sbjct: 1   MAAIHKLEAEEDADPRAVVLSI------SGGGDAAPSKNPKEEPDIDTTLGAMPVAVHVP 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           +  P    T +   PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  SGVPVPPVTAAPAGPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTT+++N +  D S  KK+ KRPANS+
Sbjct: 121 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSNANPEPGDPS--KKKHKRPANSE 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVP---SV 240
           YVD+NDAVSVS     V +           LP G VP+WAIPSN ++PGA FMVP   S+
Sbjct: 181 YVDINDAVSVSSGLAPVITPXXXXXXXXXVLPQGLVPIWAIPSNTVVPGAFFMVPPMASM 240

Query: 241 ACSSTRPQLFSFPAPGAPLVNTTARPISTVVS---KADTSHIXXXXXXXXXXXXXXXXXX 300
           A  ST+P +F+FPA   P++N +ARPIS+ VS    A  S +                 X
Sbjct: 241 AGPSTQPHIFTFPATATPVINISARPISSFVSALQAATPSQLQSNVAVTSCTVPVSKAAX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXRMLRDFSLEIYDKKELQFMSRSASKH 342
           XXXXXXXXXXXXXXXXXXXXX  LRDFSLEIYDK+ELQFM+RS SKH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXLRDFSLEIYDKQELQFMTRS-SKH 338

The following BLAST results are available for this feature:

BLAST of Carg11101 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964565.1	4.9e-154	99.71	transcription factor TCP9 [Cucurbita moschata]	[more]
XP_023515272.1	2.1e-152	98.24	transcription factor TCP9 [Cucurbita pepo subsp. pepo]	[more]
XP_022999831.1	2.7e-152	98.24	transcription factor TCP9 [Cucurbita maxima]	[more]
XP_008460149.1	1.9e-113	76.32	PREDICTED: transcription factor TCP9 [Cucumis melo]	[more]
XP_004145050.1	3.6e-112	78.36	PREDICTED: transcription factor TCP9 [Cucumis sativus] >KGN46217.1 hypothetical ...	[more]

BLAST of Carg11101 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45680.1	2.2e-63	55.63	TCP family transcription factor	[more]
AT5G51910.1	1.8e-49	44.04	TCP family transcription factor	[more]
AT3G47620.1	3.2e-30	66.67	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT3G27010.1	1.6e-29	82.43	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G69690.1	3.9e-28	80.82	TCP family transcription factor	[more]

BLAST of Carg11101 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O64647\|TCP9_ARATH	4.0e-62	55.63	Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1	[more]
sp\|Q9LT89\|TCP19_ARATH	3.3e-48	44.04	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]
sp\|Q93Z00\|TCP14_ARATH	5.8e-29	66.67	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
sp\|A2YXQ1\|PCF2_ORYSI	1.3e-28	47.64	Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV...	[more]
sp\|Q6ZBH6\|PCF2_ORYSJ	1.3e-28	47.64	Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 ...	[more]

BLAST of Carg11101 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBF3\|A0A1S3CBF3_CUCME	1.3e-113	76.32	transcription factor TCP9 OS=Cucumis melo OX=3656 GN=LOC103499048 PE=4 SV=1	[more]
tr\|A0A0A0KCU1\|A0A0A0KCU1_CUCSA	2.4e-112	78.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G075180 PE=4 SV=1	[more]
tr\|B9GPT7\|B9GPT7_POPTR	2.4e-72	54.93	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G152200v3 PE=...	[more]
tr\|A0A1U8JYW8\|A0A1U8JYW8_GOSHI	2.7e-71	57.93	transcription factor TCP9 OS=Gossypium hirsutum OX=3635 GN=LOC107911937 PE=4 SV=...	[more]
tr\|A0A2P5WWM8\|A0A2P5WWM8_GOSBA	2.7e-71	57.35	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA25192 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11101-RA	Carg11101-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 79..173 e-value: 4.4E-31 score: 108.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..313
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 30..337
None	No IPR available	PANTHER	PTHR31072:SF15	SUBFAMILY NOT NAMED	coord: 30..337
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 80..134 score: 26.204

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11101	Cla006939	Watermelon (97103) v1	carwmB1079
Carg11101	Csa6G075180	Cucumber (Chinese Long) v2	carcuB1096
Carg11101	MELO3C022520	Melon (DHL92) v3.5.1	carmeB1043
Carg11101	ClCG06G000180	Watermelon (Charleston Gray)	carwcgB1048
Carg11101	CSPI06G05640	Wild cucumber (PI 183967)	carcpiB1118
Carg11101	Cucsa.363020	Cucumber (Gy14) v1	carcgyB1193
Carg11101	CmaCh08G009380	Cucurbita maxima (Rimu)	carcmaB1495
Carg11101	CmaCh17G000040	Cucurbita maxima (Rimu)	carcmaB1488
Carg11101	CmoCh08G009070	Cucurbita moschata (Rifu)	carcmoB1452
Carg11101	CmoCh17G000060	Cucurbita moschata (Rifu)	carcmoB1447
Carg11101	Lsi09G019210	Bottle gourd (USVL1VR-Ls)	carlsiB979
Carg11101	Cp4.1LG12g00170	Cucurbita pepo (Zucchini)	carcpeB1500
Carg11101	Cp4.1LG17g02400	Cucurbita pepo (Zucchini)	carcpeB1503
Carg11101	CsGy6G005570	Cucumber (Gy14) v2	carcgybB1061
Carg11101	MELO3C022520.2	Melon (DHL92) v3.6.1	carmedB1057
Carg11101	CsaV3_6G005960	Cucumber (Chinese Long) v3	carcucB1129
Carg11101	Cla97C06G109440	Watermelon (97103) v2	carwmbB1135
Carg11101	BhiUN123G61	Wax gourd	carwgoB1272

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11101	Carg10228	Silver-seed gourd	carcarB270

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11101	Watermelon (97103) v1	carwmB1076
Carg11101	Watermelon (97103) v2	carwmbB1132
Carg11101	Silver-seed gourd	carcarB267
Carg11101	Cucurbita maxima (Rimu)	carcmaB1490
Carg11101	Cucurbita moschata (Rifu)	carcmoB1448
Carg11101	Cucurbita pepo (Zucchini)	carcpeB1501
Carg11101	Wild cucumber (PI 183967)	carcpiB1116
Carg11101	Cucumber (Chinese Long) v2	carcuB1094
Carg11101	Cucumber (Chinese Long) v3	carcucB1127