CmoCh16G009130 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGACTCACAGGGATCATTGCTCTCATATTGATGGCGGTGCTGGTTTCTGATGCCTACGCCTACCGCACCATCACCACCGTGGAAGTGAACAAAGACAACGAAAGGCGGGCGGAGAGGTGCAGCCAGATGAGGGCCGACGAGGAGATTGGCAGCTGCGTTCAGTACCTCACGCAGCAGAGCAGAGATGTGTTGCAGATGCGTGGAATCGAGAACCAGAGGAGGAGAGAAGGGCAGGTCTTCGATGAGTGCTGCAGAGAGCTGAGGAATGTGGATGAGCAGTGCAGGTGCGAACTCTTGGAGCAGATAGCGATGTGGGAAACGAGGAAAGGACGACCCCAGGAAACAAGGCAAATGCAACAGAGGGCTAGGAACTTACCATCCATGTGTGGACTCCGCCCACAGCAATGCTACTTTTAA ATGGCGAGACTCACAGGGATCATTGCTCTCATATTGATGGCGGTGCTGGTTTCTGATGCCTACGCCTACCGCACCATCACCACCGTGGAAGTGAACAAAGACAACGAAAGGCGGGCGGAGAGGTGCAGCCAGATGAGGGCCGACGAGGAGATTGGCAGCTGCGTTCAGTACCTCACGCAGCAGAGCAGAGATGTGTTGCAGATGCGTGGAATCGAGAACCAGAGGAGGAGAGAAGGGCAGGTCTTCGATGAGTGCTGCAGAGAGCTGAGGAATGTGGATGAGCAGTGCAGGTGCGAACTCTTGGAGCAGATAGCGATGTGGGAAACGAGGAAAGGACGACCCCAGGAAACAAGGCAAATGCAACAGAGGGCTAGGAACTTACCATCCATGTGTGGACTCCGCCCACAGCAATGCTACTTTTAA ATGGCGAGACTCACAGGGATCATTGCTCTCATATTGATGGCGGTGCTGGTTTCTGATGCCTACGCCTACCGCACCATCACCACCGTGGAAGTGAACAAAGACAACGAAAGGCGGGCGGAGAGGTGCAGCCAGATGAGGGCCGACGAGGAGATTGGCAGCTGCGTTCAGTACCTCACGCAGCAGAGCAGAGATGTGTTGCAGATGCGTGGAATCGAGAACCAGAGGAGGAGAGAAGGGCAGGTCTTCGATGAGTGCTGCAGAGAGCTGAGGAATGTGGATGAGCAGTGCAGGTGCGAACTCTTGGAGCAGATAGCGATGTGGGAAACGAGGAAAGGACGACCCCAGGAAACAAGGCAAATGCAACAGAGGGCTAGGAACTTACCATCCATGTGTGGACTCCGCCCACAGCAATGCTACTTTTAA
BLAST of CmoCh16G009130 vs. Swiss-Prot
Match: 2SS_CUCMA (2S albumin OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 6.1e-46 Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 1
BLAST of CmoCh16G009130 vs. Swiss-Prot
Match: 2SS_RICCO (2S albumin OS=Ricinus communis PE=1 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 2.6e-12 Identity = 50/149 (33.56%), Postives = 92/149 (61.74%), Query Frame = 1
BLAST of CmoCh16G009130 vs. Swiss-Prot
Match: 2SS_CUCMO (2S albumin (Fragments) OS=Cucurbita moschata PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.1e-10 Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 1
BLAST of CmoCh16G009130 vs. Swiss-Prot
Match: 2SS1_BEREX (2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa GN=BE2S1 PE=1 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 9.2e-10 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 1
BLAST of CmoCh16G009130 vs. Swiss-Prot
Match: 2SS1_SESIN (2S seed storage protein 1 OS=Sesamum indicum PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.2e-10 Identity = 49/143 (34.27%), Postives = 76/143 (53.15%), Query Frame = 1
BLAST of CmoCh16G009130 vs. TrEMBL
Match: A0A0A0L7Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G080340 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.0e-44 Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 1
BLAST of CmoCh16G009130 vs. TrEMBL
Match: A0A0U1Z284_TRIKI (Alpha-amylase inhibitor OS=Trichosanthes kirilowii GN=AAI PE=2 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 7.5e-43 Identity = 97/141 (68.79%), Postives = 114/141 (80.85%), Query Frame = 1
BLAST of CmoCh16G009130 vs. TrEMBL
Match: Q8L694_MOMCH (Napin OS=Momordica charantia GN=napin PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.8e-29 Identity = 73/141 (51.77%), Postives = 104/141 (73.76%), Query Frame = 1
BLAST of CmoCh16G009130 vs. TrEMBL
Match: A0A0M5WZ27_MOMCH (AdMc1 protein OS=Momordica charantia GN=adMc1 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-25 Identity = 73/141 (51.77%), Postives = 99/141 (70.21%), Query Frame = 1
BLAST of CmoCh16G009130 vs. TrEMBL
Match: Q7XBB8_LUFAE (Ribosome-inactivating protein luffin S2 (Fragment) OS=Luffa aegyptiaca PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-16 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 1
BLAST of CmoCh16G009130 vs. TAIR10
Match: AT4G27140.1 (AT4G27140.1 seed storage albumin 1) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 39/142 (27.46%), Postives = 76/142 (53.52%), Query Frame = 1
BLAST of CmoCh16G009130 vs. NCBI nr
Match: gi|778676144|ref|XP_011650534.1| (PREDICTED: 2S albumin-like [Cucumis sativus]) HSP 1 Score: 185.7 bits (470), Expect = 5.7e-44 Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 1
BLAST of CmoCh16G009130 vs. NCBI nr
Match: gi|68564970|sp|Q39649.1|2SS_CUCMA (RecName: Full=2S albumin; Contains: RecName: Full=2S albumin small chain; Contains: RecName: Full=2S albumin large chain; Flags: Precursor [Cucurbita maxima]) HSP 1 Score: 184.9 bits (468), Expect = 9.8e-44 Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 1
BLAST of CmoCh16G009130 vs. NCBI nr
Match: gi|758343810|gb|AJO68010.1| (alpha-amylase inhibitor [Trichosanthes kirilowii]) HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42 Identity = 97/141 (68.79%), Postives = 114/141 (80.85%), Query Frame = 1
BLAST of CmoCh16G009130 vs. NCBI nr
Match: gi|21327881|emb|CAD32938.1| (napin [Momordica charantia]) HSP 1 Score: 136.3 bits (342), Expect = 4.0e-29 Identity = 73/141 (51.77%), Postives = 104/141 (73.76%), Query Frame = 1
BLAST of CmoCh16G009130 vs. NCBI nr
Match: gi|930584849|emb|CDG50933.1| (AdMc1 protein [Momordica charantia]) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-25 Identity = 73/141 (51.77%), Postives = 99/141 (70.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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