Carg24822 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24822
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	2S albumin
Location	Cucurbita_argyrosperma_scaffold_157 : 207228 .. 207650 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGACTCACAGGGATCATTGCTCTCATATTGATGGCGGTGCTGGTTTCTGATGCCTACGCCTACCGCACCATCACCACCGTGGAAGTGAACAAAGACAACGAAAGGCGGGCGGAGAGGTGCAGCCAGATGAGGGCCGACGAGGAGATTGGCAGCTGCGTTCAGTACCTCACGCAGCAGAGCAGAGATGTGTTGCAGATGCGTGGAATCGAGAACCAGAGGAGGAGAGAAGGGCAGGTCTTCGATGAGTGCTGCAGAGAGCTGAGGAATGTGGATGAGCAGTGCAGGTGCGAACTCTTGGAGCAGATAGCGATGTGGGAAACGAGGAAAGGACGACCCCAGGAAACAAGGCAAATGCAACAGAGGGCTAGGAACTTACCATCCATGTGTGGACTCCGCCCACAGCAATGCTACTTTTAA

mRNA sequence

ATGGCGAGACTCACAGGGATCATTGCTCTCATATTGATGGCGGTGCTGGTTTCTGATGCCTACGCCTACCGCACCATCACCACCGTGGAAGTGAACAAAGACAACGAAAGGCGGGCGGAGAGGTGCAGCCAGATGAGGGCCGACGAGGAGATTGGCAGCTGCGTTCAGTACCTCACGCAGCAGAGCAGAGATGTGTTGCAGATGCGTGGAATCGAGAACCAGAGGAGGAGAGAAGGGCAGGTCTTCGATGAGTGCTGCAGAGAGCTGAGGAATGTGGATGAGCAGTGCAGGTGCGAACTCTTGGAGCAGATAGCGATGTGGGAAACGAGGAAAGGACGACCCCAGGAAACAAGGCAAATGCAACAGAGGGCTAGGAACTTACCATCCATGTGTGGACTCCGCCCACAGCAATGCTACTTTTAA

Coding sequence (CDS)

ATGGCGAGACTCACAGGGATCATTGCTCTCATATTGATGGCGGTGCTGGTTTCTGATGCCTACGCCTACCGCACCATCACCACCGTGGAAGTGAACAAAGACAACGAAAGGCGGGCGGAGAGGTGCAGCCAGATGAGGGCCGACGAGGAGATTGGCAGCTGCGTTCAGTACCTCACGCAGCAGAGCAGAGATGTGTTGCAGATGCGTGGAATCGAGAACCAGAGGAGGAGAGAAGGGCAGGTCTTCGATGAGTGCTGCAGAGAGCTGAGGAATGTGGATGAGCAGTGCAGGTGCGAACTCTTGGAGCAGATAGCGATGTGGGAAACGAGGAAAGGACGACCCCAGGAAACAAGGCAAATGCAACAGAGGGCTAGGAACTTACCATCCATGTGTGGACTCCGCCCACAGCAATGCTACTTTTAA

Protein sequence

MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQMQQRARNLPSMCGLRPQQCYF

Homology

[Close]

BLAST of Carg24822 vs. NCBI nr
Match: XP_022932144.1 (2S albumin-like [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 1.8e-70
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQ 60
           MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQ
Sbjct: 1   MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQ 60

Query: 61  QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM 120
           QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM
Sbjct: 61  QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM 120

Query: 121 QQRARNLPSMCGLRPQQCYF 141
           QQRARNLPSMCGLRPQQCYF
Sbjct: 121 QQRARNLPSMCGLRPQQCYF 140

[Close]

BLAST of Carg24822 vs. NCBI nr
Match: XP_023520423.1 (2S albumin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 2.0e-69
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQ 60
           MARLTGI+ALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRA EEIGSCVQYLTQ
Sbjct: 1   MARLTGILALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRAHEEIGSCVQYLTQ 60

Query: 61  QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM 120
           QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM
Sbjct: 61  QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM 120

Query: 121 QQRARNLPSMCGLRPQQCYF 141
           QQRARNLPSMCGLRPQQCYF
Sbjct: 121 QQRARNLPSMCGLRPQQCYF 140

[Close]

BLAST of Carg24822 vs. NCBI nr
Match: XP_011650534.1 (PREDICTED: 2S albumin-like [Cucumis sativus] >KGN56156.1 hypothetical protein Csa_3G080340 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQ 60
           MARLT IIAL+ +A++++DA+   TITTVEV+++N  R ERC QMRA EEIGSC QYL+Q
Sbjct: 1   MARLTSIIALLALALVIADAHR-TTITTVEVDEENPGRMERCRQMRAREEIGSCGQYLSQ 60

Query: 61  QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM 120
           QSR VLQMRGI+NQRRR GQ+FDECC EL NV+E+CRCELL++IAM E R+ R QE  QM
Sbjct: 61  QSRYVLQMRGIDNQRRRGGQLFDECCSELTNVEEECRCELLQEIAMEEQRRARGQERTQM 120

Query: 121 QQRARNLPSMCGLRPQQCYF 141
            Q A+NLPSMCG+RPQQCYF
Sbjct: 121 LQTAKNLPSMCGMRPQQCYF 139

[Close]

BLAST of Carg24822 vs. NCBI nr
Match: Q39649.1 (RecName: Full=2S albumin; Contains: RecName: Full=2S albumin small chain; Contains: RecName: Full=2S albumin large chain; Flags: Precursor >pir||T10257 2S albumin precursor - cucurbit >BAA03993.1 prepro2S albumin [Cucurbita hybrid cultivar])

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYR-TITTVEVNKDNERRAERCSQMRADEEIGSCVQYLT 60
           MARLT IIAL  +A+LV+DAYAYR TITTVEV ++ + R ERC QM A EE+ SC QYL 
Sbjct: 1   MARLTSIIALFAVALLVADAYAYRTTITTVEVEENRQGREERCRQMSAREELRSCEQYLR 60

Query: 61  QQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ 120
           QQSRDVLQMRGIEN  RREG  FDECCREL+NVDE+CRC++LE+IA  E R+ R QE RQ
Sbjct: 61  QQSRDVLQMRGIENPWRREGGSFDECCRELKNVDEECRCDMLEEIAREEQRQARGQEGRQ 120

Query: 121 MQQRARNLPSMCGLRPQQCYF 141
           M Q+ARNLPSMCG+RPQ+C F
Sbjct: 121 MLQKARNLPSMCGIRPQRCDF 141

[Close]

BLAST of Carg24822 vs. NCBI nr
Match: XP_022993226.1 (2S albumin [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYR-TITTVEVNKDNERRAERCSQMRADEEIGSCVQYLT 60
           MARLT IIAL  +A+LV+DAYAYR TITTVEV ++ + R ERC QM A EE+ SC +YL 
Sbjct: 1   MARLTSIIALFAVALLVADAYAYRTTITTVEVEENRQGREERCRQMSAREELRSCEKYLR 60

Query: 61  QQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ 120
           QQSRDVLQMRGIEN  RREG  FDECCRELRNVDE+CRC++LE+IA  E R+ R QE RQ
Sbjct: 61  QQSRDVLQMRGIENPWRREGGSFDECCRELRNVDEECRCDMLEEIAREEQRQARGQEGRQ 120

Query: 121 MQQRARNLPSMCGLRPQQCYF 141
           M Q+ARNLPSMCG+RPQ+C F
Sbjct: 121 MLQKARNLPSMCGIRPQRCDF 141

[Close]

BLAST of Carg24822 vs. TAIR10
Match: AT4G27140.1 (seed storage albumin 1)

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 39/142 (27.46%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 7   IIALILMAVLVSDAYAYRTITTVEVNKDNER-----RAERC-SQMRADEEIGSCVQYLTQ 66
           + A + +  L+++A  YRT+  VE  +D+       +  +C  + + ++ + +C Q + Q
Sbjct: 8   VCAALALCFLLTNASIYRTV--VEFEEDDATNPIGPKMRKCRKEFQKEQHLRACQQLMLQ 67

Query: 67  QSR----DVLQMR-GIENQ--RRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKG- 126
           Q+R    D       +EN   +++E Q+F +CC ELR  +  C C  L+Q A     +G 
Sbjct: 68  QARQGRSDEFDFEDDMENPQGQQQEQQLFQQCCNELRQEEPDCVCPTLKQAAKAVRLQGQ 127

Query: 127 -RPQETRQMQQRARNLPSMCGL 134
            +P + R++ Q A++LP++C +
Sbjct: 128 HQPMQVRKIYQTAKHLPNVCDI 147

[Close]

BLAST of Carg24822 vs. TAIR10
Match: AT4G27160.1 (seed storage albumin 3)

HSP 1 Score: 41.6 bits (96), Expect = 4.7e-04
Identity = 38/144 (26.39%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 7   IIALILMAVLVSDAYAYRTITTVEVNKDNERR----AERC-SQMRADEEIGSCVQYLTQQ 66
           + A + +  L+++A  YRT+  VE  +D+        +RC  + +  + + +C +++++Q
Sbjct: 8   VCATLALCFLLTNASIYRTV--VEFEEDDASNPVGPRQRCQKEFQQSQHLRACQRWMSKQ 67

Query: 67  SRDVLQMRG----IENQRRREG-----QVFDECCRELRNVDEQCRCELLEQIAMWETRKG 126
            R   Q RG    ++++   EG     Q+  +CC ELR  +  C C  L+Q A   + +G
Sbjct: 68  MR---QGRGGGPSLDDEFDFEGPQQGYQLLQQCCNELRQEEPVCVCPTLKQAARAVSLQG 127

Query: 127 R--PQETRQMQQRARNLPSMCGLR 135
           +  P ++R++ Q A+ LP++C ++
Sbjct: 128 QHGPFQSRKIYQSAKYLPNICKIQ 146

[Close]

BLAST of Carg24822 vs. Swiss-Prot
Match: sp|Q39649|2SS_CUCMA (2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-46
Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYR-TITTVEVNKDNERRAERCSQMRADEEIGSCVQYLT 60
           MARLT IIAL  +A+LV+DAYAYR TITTVEV ++ + R ERC QM A EE+ SC QYL 
Sbjct: 1   MARLTSIIALFAVALLVADAYAYRTTITTVEVEENRQGREERCRQMSAREELRSCEQYLR 60

Query: 61  QQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ 120
           QQSRDVLQMRGIEN  RREG  FDECCREL+NVDE+CRC++LE+IA  E R+ R QE RQ
Sbjct: 61  QQSRDVLQMRGIENPWRREGGSFDECCRELKNVDEECRCDMLEEIAREEQRQARGQEGRQ 120

Query: 121 MQQRARNLPSMCGLRPQQCYF 141
           M Q+ARNLPSMCG+RPQ+C F
Sbjct: 121 MLQKARNLPSMCGIRPQRCDF 141

[Close]

BLAST of Carg24822 vs. Swiss-Prot
Match: sp|P01089|2SS_RICCO (2S albumin OS=Ricinus communis OX=3988 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-12
Identity = 50/149 (33.56%), Postives = 92/149 (61.74%), Query Frame = 0


Query: 1   MARLTGIIAL--ILMAVLVSDAYAYR-TITTVEVNKDNERR----AERCSQMRADEEIGS 60
           MA+L   IAL  +L+ ++ + ++AYR TITT+E+++    R    +++C Q    +++ S
Sbjct: 1   MAKLIPTIALVSVLLFIIANASFAYRTTITTIEIDESKGEREGSSSQQCRQEVQRKDLSS 60

Query: 61  CVQYLTQQS------RDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMW 120
           C +YL Q S       +VL+M G ENQ ++E Q   +CC +++ V ++C+CE ++ IA  
Sbjct: 61  CERYLRQSSSRRSPGEEVLRMPGDENQ-QQESQQLQQCCNQVKQVRDECQCEAIKYIAED 120

Query: 121 ETRKGR--PQETRQMQQRARNLPSMCGLR 135
           + ++G+   +E+ ++ QRA  + S CG+R
Sbjct: 121 QIQQGQLHGEESERVAQRAGEIVSSCGVR 148

[Close]

BLAST of Carg24822 vs. Swiss-Prot
Match: sp|P84576|2SS_CUCMO (2S albumin (Fragments) OS=Cucurbita moschata OX=3662 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.4e-10
Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 36  ERRAERCSQMRADEEIGSCVQYLTQQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQ 95
           ERRAER SQMRADEE GS VQYLTQQ R  L         RREG+ FDE  RELRNVDE+
Sbjct: 1   ERRAERESQMRADEEFGSQVQYLTQQRRARLPW-------RREGRSFDEEFRELRNVDEE 59

Query: 96  CRCELL 102
            R +++
Sbjct: 61  ERRDMM 59

[Close]

BLAST of Carg24822 vs. Swiss-Prot
Match: sp|P15461|2SS5_HELAN (2S seed storage protein OS=Helianthus annuus OX=4232 GN=HAG5 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.7e-07
Identity = 39/145 (26.90%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 7   IIALILMAVLVSDAYAYRTITTVEVNKDNERRAER-CSQMRADEEIGSCVQYLTQQSRDV 66
           I+  +  A LV+ A A+ TI T  +  +N    +R  SQ    + +  C  +L QQ +++
Sbjct: 5   IVLALAFAALVAFATAHTTIITTTIEDENPISGQRQVSQRIQGQRLNQCRMFL-QQGQNI 64

Query: 67  LQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ------ 126
            +        R++ Q   +CC+EL+N++ QC+CE ++Q+     ++ + Q+ RQ      
Sbjct: 65  PREFDNPQMGRQQEQQLQQCCQELQNIEGQCQCEAVKQVFREAQQQVQQQQGRQLVPFRG 124

Query: 127 ------MQQRARNLPSMCGLRPQQC 139
                 ++Q+A+ LP++C L+ ++C
Sbjct: 125 SQXXXXLKQKAQILPNVCNLQSRRC 148

[Close]

BLAST of Carg24822 vs. Swiss-Prot
Match: sp|P0C8Y8|2SS2_BEREX (2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-06
Identity = 34/105 (32.38%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 37  RRAERC-SQMRADEEIGSCVQYLTQQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQ 96
           R  ++C  QM   +++  C  YL QQ  +    +     RR E    DECC +L  +DE 
Sbjct: 42  RSEQQCREQMERQQQLNHCRMYLRQQMEE-SPYQNPRPLRRGEEPHLDECCEQLERMDEM 101

Query: 97  CRCELLEQI--AMWETRKGRPQETRQMQQRARNLPSMCGLRPQQC 139
           CRCE L  +     E  + + ++ +++ ++A NL S C L PQ+C
Sbjct: 102 CRCEGLRMMLRRQREEMELQGEQMQRIMRKAENLLSRCNLSPQRC 145

[Close]

BLAST of Carg24822 vs. TrEMBL
Match: tr|A0A0A0L7Q2|A0A0A0L7Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G080340 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 7.4e-44
Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYRTITTVEVNKDNERRAERCSQMRADEEIGSCVQYLTQ 60
           MARLT IIAL+ +A++++DA+   TITTVEV+++N  R ERC QMRA EEIGSC QYL+Q
Sbjct: 1   MARLTSIIALLALALVIADAHR-TTITTVEVDEENPGRMERCRQMRAREEIGSCGQYLSQ 60

Query: 61  QSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQM 120
           QSR VLQMRGI+NQRRR GQ+FDECC EL NV+E+CRCELL++IAM E R+ R QE  QM
Sbjct: 61  QSRYVLQMRGIDNQRRRGGQLFDECCSELTNVEEECRCELLQEIAMEEQRRARGQERTQM 120

Query: 121 QQRARNLPSMCGLRPQQCYF 141
            Q A+NLPSMCG+RPQQCYF
Sbjct: 121 LQTAKNLPSMCGMRPQQCYF 139

[Close]

BLAST of Carg24822 vs. TrEMBL
Match: tr|A0A0U1Z284|A0A0U1Z284_TRIKI (Alpha-amylase inhibitor OS=Trichosanthes kirilowii OX=3677 GN=AAI PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42
Identity = 97/141 (68.79%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYR-TITTVEVNKDNERRAERCSQMRADEEIGSCVQYLT 60
           MARLTGIIAL+ +A+LV +AYAYR TITTVEV+ DN+ R +RC QM A E++ SC QYL 
Sbjct: 1   MARLTGIIALLAVALLVVEAYAYRTTITTVEVDDDNQGRQQRCRQMSAREKLRSCEQYLR 60

Query: 61  QQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ 120
           QQSRDVL MRGI+N RR+EG  FDECC ELRNVDEQCRC+LLE+IA  E R+ R QE RQ
Sbjct: 61  QQSRDVLLMRGIDNPRRKEGGSFDECCSELRNVDEQCRCDLLEEIAREEQRQARGQEGRQ 120

Query: 121 MQQRARNLPSMCGLRPQQCYF 141
           +  +ARNLPSMCGLRP +C F
Sbjct: 121 LLDKARNLPSMCGLRPDRCAF 141

[Close]

BLAST of Carg24822 vs. TrEMBL
Match: tr|Q8L694|Q8L694_MOMCH (Napin OS=Momordica charantia OX=3673 GN=napin PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-29
Identity = 73/141 (51.77%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYR-TITTVEVNKDNERRAERCSQMRADEEIGSCVQYLT 60
           MARL+ ++ L+ +A+L++D YAYR TITTVEV++DN+ R ERC  +R  E++ SC  +L 
Sbjct: 1   MARLSSMVVLLAVALLLTDVYAYRTTITTVEVDEDNQGRHERCHHIRPREQLRSCESFL- 60

Query: 61  QQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ 120
           +QSR  L+M+G+E  +    Q  +ECCR+LRNV+EQCRC+ L++IA    R+ R QE  Q
Sbjct: 61  RQSRGYLEMKGVEENQWERQQGLEECCRQLRNVEEQCRCDALQEIAREVQRQERGQEGSQ 120

Query: 121 MQQRARNLPSMCGLRPQQCYF 141
           M Q+AR LP+MCG+RPQ+C F
Sbjct: 121 MLQKARMLPAMCGVRPQRCDF 140

[Close]

BLAST of Carg24822 vs. TrEMBL
Match: tr|A0A0M5WZ27|A0A0M5WZ27_MOMCH (AdMc1 protein OS=Momordica charantia OX=3673 GN=adMc1 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-25
Identity = 73/141 (51.77%), Postives = 99/141 (70.21%), Query Frame = 0


Query: 1   MARLTGIIALILMAVLVSDAYAYR-TITTVEVNKDNERRAERCSQMRADEEIGSCVQYLT 60
           MARL+ IIAL  +A+L++DAYAYR TITTVEV++DN+ R ERC  +R  E++ SC  +L 
Sbjct: 1   MARLSSIIALFAVALLIADAYAYRTTITTVEVDEDNQGRQERCRHIRPREQLRSCQDFLR 60

Query: 61  QQSRDVLQMRGIENQRRREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQ 120
           QQ     ++  +ENQ  RE Q  +ECCR+LRNV+EQCRC+ LE++A     +   Q+  Q
Sbjct: 61  QQGGGRREI--LENQWGRE-QGLEECCRQLRNVEEQCRCDALEEVAREVQSQQHGQQGSQ 120

Query: 121 MQQRARNLPSMCGLRPQQCYF 141
           + Q AR LPSMC +RPQ+C F
Sbjct: 121 ILQHARMLPSMCQIRPQRCDF 138

[Close]

BLAST of Carg24822 vs. TrEMBL
Match: tr|Q7XBB8|Q7XBB8_LUFAE (Ribosome-inactivating protein luffin S2 (Fragment) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 76  RREGQVFDECCRELRNVDEQCRCELLEQIAMWETRKGRPQETRQMQQRARNLPSMCGLRP 135
           RR  + FDECCRELR VDEQCRCELL +IA  E R+ R Q+ RQMQQRAR+LPSMCG+RP
Sbjct: 2   RRGQEAFDECCRELRIVDEQCRCELLAEIAREEQRQARGQQGRQMQQRARDLPSMCGIRP 61

Query: 136 QQCYF 141
           Q+C F
Sbjct: 62  QRCDF 66

The following BLAST results are available for this feature:

BLAST of Carg24822 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932144.1	1.8e-70	100.00	2S albumin-like [Cucurbita moschata]	[more]
XP_023520423.1	2.0e-69	98.57	2S albumin-like [Cucurbita pepo subsp. pepo]	[more]
XP_011650534.1	1.1e-43	69.29	PREDICTED: 2S albumin-like [Cucumis sativus] >KGN56156.1 hypothetical protein Cs...	[more]
Q39649.1	1.9e-43	70.21	RecName: Full=2S albumin; Contains: RecName: Full=2S albumin small chain; Contai...	[more]
XP_022993226.1	2.5e-43	70.21	2S albumin [Cucurbita maxima]	[more]

BLAST of Carg24822 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27140.1	3.8e-06	27.46	seed storage albumin 1	[more]
AT4G27160.1	4.7e-04	26.39	seed storage albumin 3	[more]

BLAST of Carg24822 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39649\|2SS_CUCMA	6.2e-46	70.21	2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1	[more]
sp\|P01089\|2SS_RICCO	3.4e-12	33.56	2S albumin OS=Ricinus communis OX=3988 PE=1 SV=2	[more]
sp\|P84576\|2SS_CUCMO	9.4e-10	62.12	2S albumin (Fragments) OS=Cucurbita moschata OX=3662 PE=1 SV=1	[more]
sp\|P15461\|2SS5_HELAN	5.7e-07	26.90	2S seed storage protein OS=Helianthus annuus OX=4232 GN=HAG5 PE=1 SV=1	[more]
sp\|P0C8Y8\|2SS2_BEREX	3.7e-06	32.38	2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 P...	[more]

BLAST of Carg24822 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7Q2\|A0A0A0L7Q2_CUCSA	7.4e-44	69.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G080340 PE=4 SV=1	[more]
tr\|A0A0U1Z284\|A0A0U1Z284_TRIKI	1.4e-42	68.79	Alpha-amylase inhibitor OS=Trichosanthes kirilowii OX=3677 GN=AAI PE=2 SV=1	[more]
tr\|Q8L694\|Q8L694_MOMCH	5.1e-29	51.77	Napin OS=Momordica charantia OX=3673 GN=napin PE=2 SV=1	[more]
tr\|A0A0M5WZ27\|A0A0M5WZ27_MOMCH	2.0e-25	51.77	AdMc1 protein OS=Momordica charantia OX=3673 GN=adMc1 PE=2 SV=1	[more]
tr\|Q7XBB8\|Q7XBB8_LUFAE	2.2e-16	70.77	Ribosome-inactivating protein luffin S2 (Fragment) OS=Luffa aegyptiaca OX=3670 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0045735	nutrient reservoir activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24822-RA	Carg24822-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 54..138 e-value: 3.8E-9 score: 46.4
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 54..138 e-value: 8.2E-12 score: 45.3
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 35..140 e-value: 3.2E-18 score: 68.0
None	No IPR available	PANTHER	PTHR35496	FAMILY NOT NAMED	coord: 1..140
None	No IPR available	CDD	cd00261	AAI_SS	coord: 53..140 e-value: 1.75912E-11 score: 55.8719
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 13..139

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24822	Cla005277	Watermelon (97103) v1	carwmB0791
Carg24822	Csa3G078820	Cucumber (Chinese Long) v2	carcuB0809
Carg24822	MELO3C025418	Melon (DHL92) v3.5.1	carmeB0789
Carg24822	ClCG10G005680	Watermelon (Charleston Gray)	carwcgB0766
Carg24822	CSPI03G05360	Wild cucumber (PI 183967)	carcpiB0828
Carg24822	Cucsa.059740	Cucumber (Gy14) v1	carcgyB0904
Carg24822	CmaCh04G009390	Cucurbita maxima (Rimu)	carcmaB1100
Carg24822	CmoCh16G009130	Cucurbita moschata (Rifu)	carcmoB1069
Carg24822	CmoCh04G010090	Cucurbita moschata (Rifu)	carcmoB1070
Carg24822	Lsi05G006260	Bottle gourd (USVL1VR-Ls)	carlsiB729
Carg24822	Cp4.1LG01g08070	Cucurbita pepo (Zucchini)	carcpeB1110
Carg24822	Cp4.1LG00g00130	Cucurbita pepo (Zucchini)	carcpeB1109
Carg24822	CsGy3G005430	Cucumber (Gy14) v2	carcgybB0784
Carg24822	MELO3C025418.2	Melon (DHL92) v3.6.1	carmedB0801
Carg24822	Cla97C10G189900	Watermelon (97103) v2	carwmbB0829
Carg24822	Bhi11G000518	Wax gourd	carwgoB0927

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24822	Carg00052	Silver-seed gourd	carcarB567

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24822	Cucurbita maxima (Rimu)	carcmaB1099
Carg24822	Cucumber (Chinese Long) v3	carcucB0832