CmoCh16G004910 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCTTATTCGACTCGGGTTGTGATCATCGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACGGGGAAGGACCCGGTGGCGGAGGAGAATCGACATGGTGACGGTGCCCGGAACTCGAGTTTTTTGAGAGATTCGTCGTTCAAGGAGTTCCAAAGAGTGCTGCGAGAGATGCCAAGAGTTGGTGAATGA ATGGCAGCTTATTCGACTCGGGTTGTGATCATCGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACGGGGAAGGACCCGGTGGCGGAGGAGAATCGACATGGTGACGGTGCCCGGAACTCGAGTTTTTTGAGAGATTCGTCGTTCAAGGAGTTCCAAAGAGTGCTGCGAGAGATGCCAAGAGTTGGTGAATGA ATGGCAGCTTATTCGACTCGGGTTGTGATCATCGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACGGGGAAGGACCCGGTGGCGGAGGAGAATCGACATGGTGACGGTGCCCGGAACTCGAGTTTTTTGAGAGATTCGTCGTTCAAGGAGTTCCAAAGAGTGCTGCGAGAGATGCCAAGAGTTGGTGAATGA
BLAST of CmoCh16G004910 vs. Swiss-Prot
Match: VQ1_ARATH (VQ motif-containing protein 1 OS=Arabidopsis thaliana GN=VQ1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.4e-07 Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TrEMBL
Match: A0A0A0KXJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075740 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-20 Identity = 61/75 (81.33%), Postives = 63/75 (84.00%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TrEMBL
Match: A0A0S3SJY7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G207900 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-12 Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TrEMBL
Match: A0A0L9UJH2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g031100 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-12 Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TrEMBL
Match: V7BXC0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G051400g PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.3e-11 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TrEMBL
Match: A0A0B2RBV5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_034103 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.8e-08 Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TAIR10
Match: AT1G17147.1 (AT1G17147.1 VQ motif-containing protein) HSP 1 Score: 54.3 bits (129), Expect = 3.6e-08 Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 1
BLAST of CmoCh16G004910 vs. TAIR10
Match: AT1G78410.1 (AT1G78410.1 VQ motif-containing protein) HSP 1 Score: 47.0 bits (110), Expect = 5.8e-06 Identity = 33/91 (36.26%), Postives = 46/91 (50.55%), Query Frame = 1
BLAST of CmoCh16G004910 vs. NCBI nr
Match: gi|700198386|gb|KGN53544.1| (hypothetical protein Csa_4G075740 [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-20 Identity = 61/75 (81.33%), Postives = 63/75 (84.00%), Query Frame = 1
BLAST of CmoCh16G004910 vs. NCBI nr
Match: gi|659101790|ref|XP_008451795.1| (PREDICTED: uncharacterized protein LOC103492973 [Cucumis melo]) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-19 Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1
BLAST of CmoCh16G004910 vs. NCBI nr
Match: gi|920699482|gb|KOM42707.1| (hypothetical protein LR48_Vigan05g031100 [Vigna angularis]) HSP 1 Score: 79.7 bits (195), Expect = 2.3e-12 Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of CmoCh16G004910 vs. NCBI nr
Match: gi|950968160|ref|XP_014499485.1| (PREDICTED: VQ motif-containing protein 1-like [Vigna radiata var. radiata]) HSP 1 Score: 76.3 bits (186), Expect = 2.5e-11 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 1
BLAST of CmoCh16G004910 vs. NCBI nr
Match: gi|593697488|ref|XP_007149217.1| (hypothetical protein PHAVU_005G051400g [Phaseolus vulgaris]) HSP 1 Score: 75.9 bits (185), Expect = 3.3e-11 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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