CmoCh16G003090 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
BLAST of CmoCh16G003090 vs. TrEMBL
Match: A0A0A0KYF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179140 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 9.6e-58 Identity = 125/162 (77.16%), Postives = 134/162 (82.72%), Query Frame = 1
BLAST of CmoCh16G003090 vs. TrEMBL
Match: M5VTM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018393mg PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-30 Identity = 83/163 (50.92%), Postives = 105/163 (64.42%), Query Frame = 1
BLAST of CmoCh16G003090 vs. TrEMBL
Match: B9HN68_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08390g PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.4e-29 Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 1
BLAST of CmoCh16G003090 vs. TrEMBL
Match: A0A067KIJ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09909 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.5e-29 Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = 1
BLAST of CmoCh16G003090 vs. TrEMBL
Match: B9GJ06_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29290g PE=4 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 3.2e-29 Identity = 80/161 (49.69%), Postives = 96/161 (59.63%), Query Frame = 1
BLAST of CmoCh16G003090 vs. TAIR10
Match: AT5G64480.1 (AT5G64480.1 unknown protein) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22 Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of CmoCh16G003090 vs. NCBI nr
Match: gi|449459562|ref|XP_004147515.1| (PREDICTED: uncharacterized protein LOC101216824 [Cucumis sativus]) HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57 Identity = 125/162 (77.16%), Postives = 134/162 (82.72%), Query Frame = 1
BLAST of CmoCh16G003090 vs. NCBI nr
Match: gi|659108891|ref|XP_008454441.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 [Cucumis melo]) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53 Identity = 121/162 (74.69%), Postives = 132/162 (81.48%), Query Frame = 1
BLAST of CmoCh16G003090 vs. NCBI nr
Match: gi|743796370|ref|XP_011005066.1| (PREDICTED: uncharacterized protein LOC105111417 [Populus euphratica]) HSP 1 Score: 144.1 bits (362), Expect = 2.2e-31 Identity = 80/161 (49.69%), Postives = 104/161 (64.60%), Query Frame = 1
BLAST of CmoCh16G003090 vs. NCBI nr
Match: gi|225429242|ref|XP_002264192.1| (PREDICTED: uncharacterized protein LOC100267945 [Vitis vinifera]) HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30 Identity = 76/149 (51.01%), Postives = 95/149 (63.76%), Query Frame = 1
BLAST of CmoCh16G003090 vs. NCBI nr
Match: gi|1000968001|ref|XP_002518309.2| (PREDICTED: uncharacterized protein LOC8279178 [Ricinus communis]) HSP 1 Score: 139.8 bits (351), Expect = 4.2e-30 Identity = 81/163 (49.69%), Postives = 101/163 (61.96%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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