CmaCh16G002890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATTCGCAATCAATCTTCGTTTTCCTCGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGTCGGCCCTTTCTAGGAGTCGACTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTAGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGATCTCTGCGGATTTCTAGAGCTAAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTAGTTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGTGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCACCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA ATGATATTCGCAATCAATCTTCGTTTTCCTCGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGTCGGCCCTTTCTAGGAGTCGACTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTAGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGATCTCTGCGGATTTCTAGAGCTAAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTAGTTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGTGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCACCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA ATGATATTCGCAATCAATCTTCGTTTTCCTCGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGTCGGCCCTTTCTAGGAGTCGACTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTAGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGATCTCTGCGGATTTCTAGAGCTAAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTAGTTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGTGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCACCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA MIFAINLRFPRVHGQIHNFQFQSWPSSALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTDLCGFLELKSEETKRCWKKMDEEAKLTLVKEFVSEWGFNFQPLSPRSVKEMVEEYVINGENSPAISSASSLISSLKKSIGL
BLAST of CmaCh16G002890 vs. TrEMBL
Match: A0A0A0KYF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179140 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.4e-56 Identity = 125/162 (77.16%), Postives = 133/162 (82.10%), Query Frame = 1
BLAST of CmaCh16G002890 vs. TrEMBL
Match: M5VTM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018393mg PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.2e-30 Identity = 82/163 (50.31%), Postives = 107/163 (65.64%), Query Frame = 1
BLAST of CmaCh16G002890 vs. TrEMBL
Match: B9HN68_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08390g PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-29 Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 1
BLAST of CmaCh16G002890 vs. TrEMBL
Match: A0A067KIJ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09909 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.2e-29 Identity = 74/166 (44.58%), Postives = 104/166 (62.65%), Query Frame = 1
BLAST of CmaCh16G002890 vs. TrEMBL
Match: B9RX40_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0817010 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.2e-29 Identity = 75/145 (51.72%), Postives = 98/145 (67.59%), Query Frame = 1
BLAST of CmaCh16G002890 vs. TAIR10
Match: AT5G64480.1 (AT5G64480.1 unknown protein) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22 Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = 1
BLAST of CmaCh16G002890 vs. NCBI nr
Match: gi|449459562|ref|XP_004147515.1| (PREDICTED: uncharacterized protein LOC101216824 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56 Identity = 125/162 (77.16%), Postives = 133/162 (82.10%), Query Frame = 1
BLAST of CmaCh16G002890 vs. NCBI nr
Match: gi|659108891|ref|XP_008454441.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 [Cucumis melo]) HSP 1 Score: 215.7 bits (548), Expect = 6.0e-53 Identity = 123/162 (75.93%), Postives = 132/162 (81.48%), Query Frame = 1
BLAST of CmaCh16G002890 vs. NCBI nr
Match: gi|743796370|ref|XP_011005066.1| (PREDICTED: uncharacterized protein LOC105111417 [Populus euphratica]) HSP 1 Score: 144.4 bits (363), Expect = 1.7e-31 Identity = 81/161 (50.31%), Postives = 105/161 (65.22%), Query Frame = 1
BLAST of CmaCh16G002890 vs. NCBI nr
Match: gi|1000968001|ref|XP_002518309.2| (PREDICTED: uncharacterized protein LOC8279178 [Ricinus communis]) HSP 1 Score: 140.6 bits (353), Expect = 2.4e-30 Identity = 80/163 (49.08%), Postives = 103/163 (63.19%), Query Frame = 1
BLAST of CmaCh16G002890 vs. NCBI nr
Match: gi|595790611|ref|XP_007199054.1| (hypothetical protein PRUPE_ppa018393mg [Prunus persica]) HSP 1 Score: 140.2 bits (352), Expect = 3.2e-30 Identity = 82/163 (50.31%), Postives = 107/163 (65.64%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |