CSPI04G11670 (gene) Wild cucumber (PI 183967)

NameCSPI04G11670
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaC03g49690D protein
LocationChr4 : 9985113 .. 9986394 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAGGAGGTCCCTTATAGACTCTCCCATGGCCGAGGTTAGTTATGCACTGGGTTGCTAAATTGCACCCGAATACGCCATGCCTTTGTCACTTTCTTCCTCATCCTCGTGGTTTTGAGAGGTAGAGATCTTTTATTAGCAAATTGAGAGAGAGAGTCGAGCGATGGTAAATAGCATAAACTTAGCGAACCTTCGAATTTTGGCTCAATAACTTCCTCCCTCCTTCAAGTCTCAGCCCGTTTCTCTTCATTTTTTTTTCTTTGCTGCAAATCTTACGATTGAAGCATCTACAAGCAAAAATCTTCTCAAATGATTTCCGCTATCAATCTCCGTCTTCCTATCCACAGTTTCCGATTCCAGCCTTCGCCGTCTCCGACCCTTTCCCGGAACCGGATGCCCCGCCAAATCACGTACTGCAGAAAGAAACTCAGCGACGCGGATCTGGCCTCCGATCTTGCAACGGAAGTGGCAAAAATCAACACTAATTTGATTCAGAGAGAGGAGGCGATGAAGAAGAGCAGAGAGTTTTTGTTTACAGAGCTGTGCGAATTTCTAGGGCTAAAGTCGGAGGAGACGAAGAGGAAGTGGATGAAGATGGAGGAAGAGGCGAAATTGAGATTGGTTAAAGAGTTTGTTTCGGAGTGGGGGTTCAATTTTCAGCCATTGTCGGGTAGGTGTGTGAAGGAAATGGTGGAAGAATACGTTAATGGAGAAAATTTGTATGGGATTTCTTCTGCTTCCTCGTTCATTTCTTCGTTGAAGAAAACGATGGGATTGTGAAACACAGATAATTAGATGCATTCATGGGATGAATTTTGCATTTGGATCTTTAATTCCCAAATTCCATGTAAGCTATTCTCTGTTTTTCTTTTTTCTTATGGATTTCGACCCTCAAATTCGGTATAACTTTTTTTGCCATAATTGGCAGAACGAATTACAATTTTGTTTTCTTGGTTGGGAAAAGAGATGAAGCCTTCGAAATAATTGTAGTATTTACTAAGCAACTATTTATACATTTATGAGTTATAATATTGGTTCTTAACTATTTCAGATAGATTATAATTTTAAGTTTGAAGTTGCTGTTTATTTAGTGCAAGTTCTCATGGGGTTCATGTCATGTTTTATTGGAAGTAGTGAGATATTGTCATGGGATATCGGTTCTGAACAAGGGTGACTATTTAAGGCCTATATACAAAGCTCTCATCTCCTTGATTCCCAAAGTCTAGAAGCCAAAACATATATCAGAGTTTCGTCGTGCATTGTAATCAATAAAATTATTGCT

mRNA sequence

ATGATTTCCGCTATCAATCTCCGTCTTCCTATCCACAGTTTCCGATTCCAGCCTTCGCCGTCTCCGACCCTTTCCCGGAACCGGATGCCCCGCCAAATCACGTACTGCAGAAAGAAACTCAGCGACGCGGATCTGGCCTCCGATCTTGCAACGGAAGTGGCAAAAATCAACACTAATTTGATTCAGAGAGAGGAGGCGATGAAGAAGAGCAGAGAGTTTTTGTTTACAGAGCTGTGCGAATTTCTAGGGCTAAAGTCGGAGGAGACGAAGAGGAAGTGGATGAAGATGGAGGAAGAGGCGAAATTGAGATTGGTTAAAGAGTTTGTTTCGGAGTGGGGGTTCAATTTTCAGCCATTGTCGGGTAGGTGTGTGAAGGAAATGGTGGAAGAATACGTTAATGGAGAAAATTTGTATGGGATTTCTTCTGCTTCCTCGTTCATTTCTTCGTTGAAGAAAACGATGGGATTGTGA

Coding sequence (CDS)

ATGATTTCCGCTATCAATCTCCGTCTTCCTATCCACAGTTTCCGATTCCAGCCTTCGCCGTCTCCGACCCTTTCCCGGAACCGGATGCCCCGCCAAATCACGTACTGCAGAAAGAAACTCAGCGACGCGGATCTGGCCTCCGATCTTGCAACGGAAGTGGCAAAAATCAACACTAATTTGATTCAGAGAGAGGAGGCGATGAAGAAGAGCAGAGAGTTTTTGTTTACAGAGCTGTGCGAATTTCTAGGGCTAAAGTCGGAGGAGACGAAGAGGAAGTGGATGAAGATGGAGGAAGAGGCGAAATTGAGATTGGTTAAAGAGTTTGTTTCGGAGTGGGGGTTCAATTTTCAGCCATTGTCGGGTAGGTGTGTGAAGGAAATGGTGGAAGAATACGTTAATGGAGAAAATTTGTATGGGATTTCTTCTGCTTCCTCGTTCATTTCTTCGTTGAAGAAAACGATGGGATTGTGA
BLAST of CSPI04G11670 vs. TrEMBL
Match: A0A0A0KYF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179140 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1

Query: 1   MISAINLRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNL 60
           MISAINLRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNL
Sbjct: 1   MISAINLRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNL 60

Query: 61  IQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLS 120
           IQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLS
Sbjct: 61  IQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLS 120

Query: 121 GRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL 157
           GRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL
Sbjct: 121 GRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL 156

BLAST of CSPI04G11670 vs. TrEMBL
Match: B9RX40_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0817010 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-32
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 14  FRFQPSPSPTLSRNRMPRQITYC--RKKLSDADLASDLATEVAKINTNLIQREEAMKKSR 73
           FR+ P P+ T   NR+   I  C    K+SDADLASDLATEVAKINT L+Q+EEAM+K +
Sbjct: 2   FRYFPFPTATHFSNRLKTHIQ-CNNNNKVSDADLASDLATEVAKINTQLVQKEEAMRKGK 61

Query: 74  EFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLSGRCVKEMVEEY 133
           E LFTELC +L ++ EE KRKW  +++E K  L+  FV EWG NF PLS R V+ M+EEY
Sbjct: 62  ELLFTELCHYLDMEKEEVKRKWSNLDQEEKWVLIIGFVDEWGINFHPLSARSVRAMIEEY 121

Query: 134 VNGENLYGISSASSFISSLKKTMG 156
           +N +     SSAS     LK+ MG
Sbjct: 122 INEKKSSSSSSASELFPGLKRLMG 144

BLAST of CSPI04G11670 vs. TrEMBL
Match: B9HN68_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08390g PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31
Identity = 81/144 (56.25%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 14  FRFQPSPSPTLSRNRMPRQITYCRKK--LSDADLASDLATEVAKINTNLIQREEAMKKSR 73
           F   P P+ T  R R+P     C  K  L+DADLAS LATEVAKINT+L+QREEAMKKSR
Sbjct: 19  FHSCPFPTTTHFRTRIP-----CTNKNSLTDADLASGLATEVAKINTHLVQREEAMKKSR 78

Query: 74  EFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLSGRCVKEMVEEY 133
           E LFTELC +L L  EE ++KW KM++E    LVK FV+EWG NF PLS R V+EM+EEY
Sbjct: 79  ELLFTELCNYLALDKEEVEKKWSKMDQEEIRVLVKGFVNEWGANFHPLSARSVEEMIEEY 138

Query: 134 VNGENLYGISSASSFISSLKKTMG 156
           ++ E     SS S     LK+ MG
Sbjct: 139 LHEEKPSSNSSRSMLFPGLKRIMG 157

BLAST of CSPI04G11670 vs. TrEMBL
Match: M5VTM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018393mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-31
Identity = 81/158 (51.27%), Postives = 110/158 (69.62%), Query Frame = 1

Query: 2   ISAINLRLPIHSFRFQPSPSPTLSR-NRMPRQ--ITYCRKK-LSDADLASDLATEVAKIN 61
           ++ ++ ++P    +F  +  P+++R N  P+   I +C  K +SDA+LASDL+    K+N
Sbjct: 5   MNLLSPKIPKQPPKFHTNSYPSITRFNTRPKTQIIIHCNNKNISDAELASDLS----KMN 64

Query: 62  TNLIQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQ 121
           T  +QREEAMKKSRE LFTELC++L  KSEE K+KW KMEEE K  L+K FVSEWG NF 
Sbjct: 65  TLFMQREEAMKKSRELLFTELCQYLNSKSEEVKKKWRKMEEEDKWVLIKGFVSEWGVNFH 124

Query: 122 PLSGRCVKEMVEEYVNGENLYGISSASSFISSLKKTMG 156
           PLS + VKE+VEE+++ EN    SSAS+F   LK+ MG
Sbjct: 125 PLSAKSVKELVEEHLHEENPPAKSSASAFFPGLKRMMG 158

BLAST of CSPI04G11670 vs. TrEMBL
Match: A0A067KIJ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09909 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.4e-31
Identity = 74/149 (49.66%), Postives = 102/149 (68.46%), Query Frame = 1

Query: 7   LRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNLIQREEA 66
           L+   H F F   P+ T    R+  QI   ++++SDADLASDLATEVA+IN +L QREEA
Sbjct: 17  LKSQTHPFSF---PTATHFTKRIKTQIPCAKRRISDADLASDLATEVARINADLAQREEA 76

Query: 67  MKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLSGRCVKE 126
           MKKS+E LF ELC +L ++ EE KRKW K++++ K  L++ FV+EWG NF PLS R ++E
Sbjct: 77  MKKSKELLFIELCHYLAIEKEEVKRKWSKIDQQEKWVLLEGFVNEWGVNFHPLSIRSIRE 136

Query: 127 MVEEYVNGENLYGISSASSFISSLKKTMG 156
           M++EY+N E     S++S     LK+ MG
Sbjct: 137 MIDEYLNEEKT-AASNSSDLFPGLKRMMG 161

BLAST of CSPI04G11670 vs. TAIR10
Match: AT5G64480.1 (AT5G64480.1 unknown protein)

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-22
Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 1

Query: 37  RKKLSDADLASDLATEVAKINTNLIQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKM 96
           +K ++D++LA+DLA E+ K NT   QR EAMKKS E L+ E C  + LK +E K KW K+
Sbjct: 57  KKIMTDSELATDLAREIGKANTVAEQRREAMKKSGEILWAEFCRHMDLKEDEMKIKWNKI 116

Query: 97  EEEAKLRLVKEFVSEWGFNFQPLSGRCVKEMVEEYVNGENLYGISSASSFISS 150
            EE KL LV+EFV EW  +FQPLS   VKEMV++     +    SS+SS +SS
Sbjct: 117 GEEEKLVLVREFVDEWAGDFQPLSITSVKEMVDQECLDSDKTIESSSSSSMSS 169

BLAST of CSPI04G11670 vs. NCBI nr
Match: gi|449459562|ref|XP_004147515.1| (PREDICTED: uncharacterized protein LOC101216824 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1

Query: 1   MISAINLRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNL 60
           MISAINLRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNL
Sbjct: 1   MISAINLRLPIHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINTNL 60

Query: 61  IQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLS 120
           IQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLS
Sbjct: 61  IQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLS 120

Query: 121 GRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL 157
           GRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL
Sbjct: 121 GRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL 156

BLAST of CSPI04G11670 vs. NCBI nr
Match: gi|659108891|ref|XP_008454441.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-70
Identity = 144/159 (90.57%), Postives = 147/159 (92.45%), Query Frame = 1

Query: 1   MISAINLRLP---IHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKIN 60
           MISAINLR P   IH+FRFQPSPSPTL RNRMPRQITYCRKKLSDADLA DLATEVAKIN
Sbjct: 1   MISAINLRPPRGEIHNFRFQPSPSPTLFRNRMPRQITYCRKKLSDADLAFDLATEVAKIN 60

Query: 61  TNLIQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQ 120
           TNLIQREEAMKKSR FL+  + EFLGLKSEETKRKW KMEEEAKLRLVKEFVSEWGFNFQ
Sbjct: 61  TNLIQREEAMKKSRAFLYRAV-EFLGLKSEETKRKWKKMEEEAKLRLVKEFVSEWGFNFQ 120

Query: 121 PLSGRCVKEMVEEYVNGENLYGISSASSFISSLKKTMGL 157
           PLSGRCVKEMVEEYVNGENLYGISSASS ISSLKKTMGL
Sbjct: 121 PLSGRCVKEMVEEYVNGENLYGISSASSLISSLKKTMGL 158

BLAST of CSPI04G11670 vs. NCBI nr
Match: gi|743796370|ref|XP_011005066.1| (PREDICTED: uncharacterized protein LOC105111417 [Populus euphratica])

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-33
Identity = 84/144 (58.33%), Postives = 99/144 (68.75%), Query Frame = 1

Query: 14  FRFQPSPSPTLSRNRMPRQITYCRKK--LSDADLASDLATEVAKINTNLIQREEAMKKSR 73
           F   P P+ T  R R+P     C  K  L+DADLAS LATEVAKINT+L+QREEAMKKSR
Sbjct: 19  FHSCPFPTTTHFRTRIP-----CTNKNSLTDADLASGLATEVAKINTHLVQREEAMKKSR 78

Query: 74  EFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLSGRCVKEMVEEY 133
           E LFTELC +L L  EE KRKW KM++E +  LVK FV+EWG NF PLS R VKEM+EEY
Sbjct: 79  ELLFTELCNYLALDKEEVKRKWSKMDKEERRVLVKGFVNEWGANFHPLSARSVKEMIEEY 138

Query: 134 VNGENLYGISSASSFISSLKKTMG 156
           ++ E     SS S+    LK+ MG
Sbjct: 139 LHEEKPSSNSSRSTLFPGLKRIMG 157

BLAST of CSPI04G11670 vs. NCBI nr
Match: gi|1000968001|ref|XP_002518309.2| (PREDICTED: uncharacterized protein LOC8279178 [Ricinus communis])

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 14  FRFQPSPSPTLSRNRMPRQITYC--RKKLSDADLASDLATEVAKINTNLIQREEAMKKSR 73
           FR+ P P+ T   NR+   I  C    K+SDADLASDLATEVAKINT L+Q+EEAM+K +
Sbjct: 19  FRYFPFPTATHFSNRLKTHIQ-CNNNNKVSDADLASDLATEVAKINTQLVQKEEAMRKGK 78

Query: 74  EFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLSGRCVKEMVEEY 133
           E LFTELC +L ++ EE KRKW  +++E K  L+  FV EWG NF PLS R V+ M+EEY
Sbjct: 79  ELLFTELCHYLDMEKEEVKRKWSNLDQEEKWVLIIGFVDEWGINFHPLSARSVRAMIEEY 138

Query: 134 VNGENLYGISSASSFISSLKKTMG 156
           +N +     SSAS     LK+ MG
Sbjct: 139 INEKKSSSSSSASELFPGLKRLMG 161

BLAST of CSPI04G11670 vs. NCBI nr
Match: gi|223542529|gb|EEF44069.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 14  FRFQPSPSPTLSRNRMPRQITYC--RKKLSDADLASDLATEVAKINTNLIQREEAMKKSR 73
           FR+ P P+ T   NR+   I  C    K+SDADLASDLATEVAKINT L+Q+EEAM+K +
Sbjct: 2   FRYFPFPTATHFSNRLKTHIQ-CNNNNKVSDADLASDLATEVAKINTQLVQKEEAMRKGK 61

Query: 74  EFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQPLSGRCVKEMVEEY 133
           E LFTELC +L ++ EE KRKW  +++E K  L+  FV EWG NF PLS R V+ M+EEY
Sbjct: 62  ELLFTELCHYLDMEKEEVKRKWSNLDQEEKWVLIIGFVDEWGINFHPLSARSVRAMIEEY 121

Query: 134 VNGENLYGISSASSFISSLKKTMG 156
           +N +     SSAS     LK+ MG
Sbjct: 122 INEKKSSSSSSASELFPGLKRLMG 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KYF6_CUCSA1.0e-80100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179140 PE=4 SV=1[more]
B9RX40_RICCO1.8e-3253.47Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0817010 PE=4 SV=1[more]
B9HN68_POPTR1.1e-3156.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08390g PE=4 SV=1[more]
M5VTM1_PRUPE2.5e-3151.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018393mg PE=4 SV=1[more]
A0A067KIJ2_JATCU7.4e-3149.66Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09909 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G64480.17.3e-2250.44 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449459562|ref|XP_004147515.1|1.5e-80100.00PREDICTED: uncharacterized protein LOC101216824 [Cucumis sativus][more]
gi|659108891|ref|XP_008454441.1|8.9e-7090.57PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 [Cucumis me... [more]
gi|743796370|ref|XP_011005066.1|1.8e-3358.33PREDICTED: uncharacterized protein LOC105111417 [Populus euphratica][more]
gi|1000968001|ref|XP_002518309.2|2.5e-3253.47PREDICTED: uncharacterized protein LOC8279178 [Ricinus communis][more]
gi|223542529|gb|EEF44069.1|2.5e-3253.47conserved hypothetical protein [Ricinus communis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G11670.1CSPI04G11670.1mRNA


The following gene(s) are paralogous to this gene:

None