CmoCh16G002870 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G002870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSerine/threonine-protein phosphatase 4 regulatory subunit 2
LocationCmo_Chr16 : 1308726 .. 1314222 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGACACTGCGCGGAGATGGAGGATCCGCAGAGATCGATGCGGGTTATGATTAGGGTTTCCATTCAGATTTGGGGATTTTTCATTTCTAGGGTTCCTGATTAAAAAATCCCCCTCTACGTATCTCTTTCTACCAATTCAATCGAAAGTTTCAGATCCTTGAAGCCTCCGTTTTCTCTATCTAGAACTGGTTTTTCAGACACTCTCATGCGTAATTAGATGGAGAATCACAAAGAAAACTCTCAGGAACCGATGATTCGGGTCTGATACGATCGGGTCGGGTCGATCAGTCGGGCCAACGTGTCTTGAACGTGAATTCGATGAAAATGATGAAATAACGATTACCGGATTTGGATGTACGTGTAAATGAGTCAACGTCGAATTTTATTATTATTATTTTTTAAACTATTTTATCTTATTGTCGTTTTAGGCCCTTAATTTTAATCAAATTACCGTTTACCCCCTTCAGTTAATCTCTTGTAAATTTTTAAATTACTTGGGCCATTTTCAAATTTGAAGAAGTTAAGGGACGTTCATTTTCAATTATGTACAAAATTTATTATATAATTATAAATATTAAATTAAATACTAATTGATAATTTAATTATAGATTTTAAAATTGTATTATTTAATTTCTTTTAATTAATTTAAGTTAATTATATAATGTATTAAATTTTAAATTAATTTATATTTCTGTCTATGAAAAAAGTTTGGCCCAATTTTTGGCGGCATCGGGCCTGGGCCTTAAATCGCCTCACCGGAGACTTGCTCTCATTTGCTTCACCAGTCGGTCCGAGCGTCTCGGCTGTAGCTCGCTTCAGTTGAGATCATCTTCAAGCTCACTAGGTAAGTTCCGTCGCTTGCTCGATTCTGTCTGGTCACTATGTAAAGGAATTAGAAATAATTGAAATGCTGCTTTAACGAATTATCTTTTCCTTGTTTGCTGCTGAATCGGTGCCCCTTTATTTTTAGCTGTATACTGTACGATGATGGCGATGTTATGAATAGTGTTTGCTTTGGGCTTATTTTGTTAGTGAAGTGAAGTTGTAAGCTTCAAGGAACTGGCGTCTTTTTTATTTCGATTTTGTTTCTATATTTGTGTTTGGGTTTAGTCAGTTGTATTGAAGTGATGATATTATGGTCCAAGTTAACTTTTAGAGATCTGACGTCTGAGTTCTTCCATAAGCTAATTTTTTAGGCCTGAGTTCCTATAGAATTAGTCTGTCATCCATTTCATTTTCTTCAAGATCAGATAAATGCTTCATGTTTGGTTTAGCGAATTCTTACTTCTAAAAACGGGATAATAGTTGTGTTAGATGCTAGAACTGATTTCCATCGATTAAAATTGCAAGAAATAGGGAATAGATAAGATATGTGCCCATTCAAGAAAAGAGCTCGCTAAAGAAGCTCCTTTTGGTATTTGTAAATAGTTAGGGGAAAAGAAACGTAAATGGTGGTGGTCATCCAGTGCTTTGAAAGACTGTGGCTCTCGCTTTATTCTTCGGTGGGTTTGGTATTGGAAGAATTTAAAAGAGAAATGAGTTTTGTTATCAAAATGGCTTCTACGCTTACCAATTATGTCTCTGTTTCCTTCTTTGCTTTCATTGATTGCCCTTTATTCTTGTTGTATATAATTTGTGCCCTCGGGATTAATTGGAATTGTGTTTCATTTGTTCTGGCGGGCTTCTTTTATTTAGCTTTTTTCAGTTTCGTTGGGGTCCCCCTTTGCAGTGTTATTTATCCTCTCTGTACTTCCATATTTCTGTATGGAAGTCTTACTATAGTTATGACTTTTTTTTTTTACTATGCTTTTAGTAGTCACTATGCGAATGGAACTGCAATATTTATGTTTTTGGTTACATCTGAAGTAGGTGGGAAGTAGACATCGCTTGATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCCGCCGATGCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGGTATATAAGCACATCATTTCCCTTATTTCCTGTAATTTTATTTTTAGTTCACGATGTTAGTTTGTGATCTTGTTTTCTTATATTTTTGTAGTAGCTTCTTCCAAATCGCATAGAATACTTGTTACTCTGTTTGTGAATTTACAACTGCTATGAAGTTTCAAATTGCATGTTTTTACTTGGCTTATGTTTGCACGGCTGTAATGGGAGCAGATATGGGTTACATTCAAATGGCTAGAATTCCATTTCATTTTCCAAGGACACCTTTAGCAACTCATAAAAAGTGATCTCTTTTTACCTTCAGACTTTTTGTTCTTTGATTAACTTTTTGTAGAGAGGATGATAGAGTATAGTTTTTTGAGGATCCTTAACTTTTAAGATGAGCATTTCATGTCCAGCTGTTCTGGCTTGTTTATCCAGTGAGTTATATTTATTGTTTTGTAAAAGTATTTTTGTACCTGTAATTTCCAGAACCATGGAGCAGAAGCAAGAAATCTCTGAGGTAGAAGTAAGAGGGACACTAGAAGCAATTGCATCCGCAGGGAAATTCTGGTATCTTTCTTCTCCACCTAATTTCTGTTGACGTAGGTATGAATATGAAGACGCTATATCAAAAATCTGATACAGTTCGGACTTTGGAAGTGTATGAATTTATACATCAGAATCTAAAGCACTTCGATATGTTGAATGGTTACCAAGTGCAATTTAAATAGGGAGGCCAAGGGGTTCATTGGTTGAATTCTGCTAGACTAGGTTTGTGGGAGGTTATTTTTTTAAAGAATAGGAGAATTGTTGTTCATGAAAAAACCCTTAAAATTGGAAGAATAAATCTATTGTAACAGTGTAATTTGTCCCCTTATAGAAACTTTAATTGGAGGTTTCTTTAGTATGCTCTTTTGGATGTAGGTCTACCCGTGGAACTTATGGCACACAATCAGCTACATAAAATATGAACTGTGTGGATCAGTTTAAAGTTTTCTTTTTGTTATGAACTTACAATATATATGTGTTTACGTACTTTATGTTCTCAGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTATGGGGAGGTACGCATGAATGCATTTCTTGTGTTTTTTAGCAGTGGATGTTTTAAAGTTCCTGCATAGGGGGCATGCATATCATATTTGTTGTATCCAGTTTTTTAGTGAAAATTTTGACTCTTTTTTTTCTTGCCTGCCTTTGAAGGTGCTGTCAGAATATCCTGAAGCTAAAGCGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGGTTTGTGAGCTTCTCCACTTCCTATTGTTTACTGTAGATTTATTTGAAAAACCAAGTTCGGGCAGTAAACTACACTTTGAATCATTCAAGTGGTCATGCATTTTTGGAGTCACCTATCTAGTGTATAAAATATACTACCGGTCCTTTTACTACAAAATCCAGTCGAACAGTTCTCCTAGTAATTTGAGAATACAAAAAGCTCTCCGGATTGATCTCAATAAAAGAAAGTTTCCTTTATGAGCCAGACGTAATTAAGATTTATTTTTTATTTTTATTTTTTTTTTTTTTGCAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGGTGATTATCCATATTCACTACAATGCAATTTCTTCCTATAAATTTTCATTTGTACTTTTTCGTTTATTAATTGTCAATGAGACTGCAAATAATTGCTTTAAAGAATGCCATTGTTACCGACCTTAGCACTCTTGTACATCTTATTTGTTAGTTCTTGTTATTCAAACATTACAAAATCTTTTGCCAAATATCGAAATTTGAAGCGACCATATCTTAATTTTTTTTTCCCCTTCCCCACTGGTCCTAATAATTTCAAAGACAGAAAAAGTTACAGTTAGAGCTTTTCTAATAGTTTCTTTTTTCTTTGCTGGTCTTTTGGGACATATTAGCATGACAAGAATTTGTATTAAATTGATTTAGCAAAATTATGATTCTCACCATTGTTTAAATATGTTCTCCAAAATTGATGACAAGACAGATCCTATTAGATGCACGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGGTATGGAGTTTTCTTGATATTCTGTGTTTTATTTTTTTATTTTTTATTATTATTTTTTTTTTTTTGGACTCGTTTTGTATTTTATTTGGCATATCTGAATGCTGCCTGGTTTTTCTTCCTTTTTTCATTGTTCATTTAAAAATTCTCATTTGTGGCCCCTCATTGAACTGTTTATATGTAGTGTTTTATCTTCAAAGGTGATACTTATTTGTTGGTTCACTATTAATGTAAACTAAATTTCTAATTTTATAAAGGGGAAATATTATCGAAAATCTTTTTTGGGAGCTTTGTTTGGGTTGATTCTCTTTTATATTTAGGTCTTTTTCTTCCTCATGTATCTAACTTGTGCTTCTTCATTTCATCCACTTTTCTTACCTTGTAAAAGGAAAAGTTTTAAAGGAAGTATTACGATATTCTAATTTGTATTTAAATGTTGGTTGCATTATTATTCAATCTTAACCGTTCATATCTTGATAGCGAATGCTTAATATCATGTCTAATTATTCTAAGTTTACGTTTATAGAATCTTTTGGTGACATCCACGCTTGCCATCAGTTCTGACCCATGTTTACCGTCCCCCGACCCAAAGCCAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCCGATGTAGTAGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGCGAACAATAATTCTTAGCCTTCATGACGCACCTTAAGCTGGCTGCTGTAGTTCTTCTGCTAATCTCTTTTGGGGAAGAGCCATGGCTGGTACAACATAGATCGTTCATTCCAATATTGAAGAACTATAATTGTATCCATAGTTCTTCAATATGTCAATTTCTTCATTCCAATGTAATTGCAGGGATGGTTATTTTACACTCGGGGAGTTTTGGCGGTTGGGTACAACACACATCGTTGGTACATGGAATTAGCCAACAATTATGAGCTACTGCTTTTGCTTGGATGTTTTCTTGATTAAATATGAGTGACAACCGATGTTCTTGACCTCTAAACTTTTGATATGGCACACCCCATTGGCCAATGTAAATGGTTTGCCCTCTTTGCAACTGTTGATTCCTTCTGATTTATCTAGCGCATGCAGGATAGTATGAACTTTTTCATATGGTCTTTAGATTTCTTGTGATGTTTACATATCTAGCTCAGTTTTCAAAAGATTTTAGAACTACCATCATTACAATTTATTTGGGGCACCAACTTCCTTGACCTTCCCGCATCGAGTAGGCATCAGTCTTCCA

mRNA sequence

ATGATCCGACACTGCGCGGAGATGGAGGATCCGCAGAGATCGATGCGGGTTATGATTAGGGTTTCCATTCAGATTTGGGGATTTTTCATTTCTAGGGTGGGAAGTAGACATCGCTTGATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCCGCCGATGCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGAACCATGGAGCAGAAGCAAGAAATCTCTGAGGTAGAAGTAAGAGGGACACTAGAAGCAATTGCATCCGCAGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTGCTGTCAGAATATCCTGAAGCTAAAGCGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGAATCTTTTGGTGACATCCACGCTTGCCATCAGTTCTGACCCATGTTTACCGTCCCCCGACCCAAAGCCAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCCGATGTAGTAGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGCGAACAATAATTCTTAGCCTTCATGACGCACCTTAAGCTGGCTGCTGTAGTTCTTCTGCTAATCTCTTTTGGGGAAGAGCCATGGCTGGTACAACATAGATCGTTCATTCCAATATTGAAGAACTATAATTGTATCCATAGTTCTTCAATATGTCAATTTCTTCATTCCAATGTAATTGCAGGGATGGTTATTTTACACTCGGGGAGTTTTGGCGGTTGGGTACAACACACATCGTTGGTACATGGAATTAGCCAACAATTATGAGCTACTGCTTTTGCTTGGATGTTTTCTTGATTAAATATGAGTGACAACCGATGTTCTTGACCTCTAAACTTTTGATATGGCACACCCCATTGGCCAATGTAAATGGTTTGCCCTCTTTGCAACTGTTGATTCCTTCTGATTTATCTAGCGCATGCAGGATAGTATGAACTTTTTCATATGGTCTTTAGATTTCTTGTGATGTTTACATATCTAGCTCAGTTTTCAAAAGATTTTAGAACTACCATCATTACAATTTATTTGGGGCACCAACTTCCTTGACCTTCCCGCATCGAGTAGGCATCAGTCTTCCA

Coding sequence (CDS)

ATGATCCGACACTGCGCGGAGATGGAGGATCCGCAGAGATCGATGCGGGTTATGATTAGGGTTTCCATTCAGATTTGGGGATTTTTCATTTCTAGGGTGGGAAGTAGACATCGCTTGATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCCGCCGATGCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGAACCATGGAGCAGAAGCAAGAAATCTCTGAGGTAGAAGTAAGAGGGACACTAGAAGCAATTGCATCCGCAGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTGCTGTCAGAATATCCTGAAGCTAAAGCGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGAATCTTTTGGTGACATCCACGCTTGCCATCAGTTCTGACCCATGTTTACCGTCCCCCGACCCAAAGCCAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCCGATGTAGTAGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGCGAACAATAATTCTTAG
Homology
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BLAST of CmoCh16G002870 vs. TrEMBL
Match: A0A0A0L0H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092950 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.3e-80
Identity = 177/242 (73.14%), Postives = 191/242 (78.93%), Query Frame = 1 

Query: 40  MEVPLNEDSELPASADAVHQQQDNVLP--DTINGGTMEQKQEISEVEVRGTLEAIASAGK 99
           MEVP NEDSELPASAD VHQ+QD+VLP  DTIN G MEQKQEI+E EVR TLEAIAS GK
Sbjct: 1   MEVPPNEDSELPASADTVHQEQDDVLPVPDTINDGVMEQKQEINEEEVRSTLEAIASTGK 60

Query: 100 FWHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQSTLGETFPELVKRLDEALLSFIDGPPF 159
           FW+DWEKLKSMLSFQLKQVLSEYPEAKAS EQQSTLGETF ELVKRLDEAL SF++GPPF
Sbjct: 61  FWYDWEKLKSMLSFQLKQVLSEYPEAKASSEQQSTLGETFSELVKRLDEALHSFVEGPPF 120

Query: 160 TLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIA 219
           TLQRICE                     NLLVTSTLA+SSD  +PS +PKPNE +E E A
Sbjct: 121 TLQRICEILLDACTIYPNLSKLALALEKNLLVTSTLAVSSDLHVPSSNPKPNESDESEKA 180

Query: 220 VEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAANN 256
            EEQK  S+ VENGIEPIAGD DEVM EVEEADMND MTMDME    +VGSSETN+A N+
Sbjct: 181 -EEQK-LSNAVENGIEPIAGDGDEVMVEVEEADMNDDMTMDMETFEEIVGSSETNNAPNS 240

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BLAST of CmoCh16G002870 vs. TrEMBL
Match: M5X1Z4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010709mg PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-56
Identity = 133/242 (54.96%), Postives = 162/242 (66.94%), Query Frame = 1 

Query: 40  MEVPLNEDSE-LPASADAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGKF 99
           ME+P NE+S+ L  S      Q + ++PD +N    E K E++E EVRG L  IAS GKF
Sbjct: 1   MEMPSNENSQPLMNSTSDADNQHETIVPDGLNNAYKESKHEVAEEEVRGILAVIASTGKF 60

Query: 100 WHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQ-STLGETFPELVKRLDEALLSFIDGPPF 159
           WHDW+KLKSMLSFQLKQVLSEYPE K + EQQ ++LGET+PELVKRLDEAL SF +GPPF
Sbjct: 61  WHDWDKLKSMLSFQLKQVLSEYPEGKMADEQQIASLGETYPELVKRLDEALNSFTEGPPF 120

Query: 160 TLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIA 219
           TLQR+CE                     NLLVT+ L +S+D   P P P      EP+ A
Sbjct: 121 TLQRLCEILLDAQTTYPNLSKLAFALEKNLLVTTMLTVSTD---PYPQPMVQNSAEPKQA 180

Query: 220 VEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAANN 256
            EE K  SD V+NG+E + GDRDEVMAEVE+AD++D MT+ +EA   +VGSSETNS   N
Sbjct: 181 TEEPKLHSDSVQNGVESMVGDRDEVMAEVEQADIDDDMTIAIEAFEDIVGSSETNSVQTN 239

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BLAST of CmoCh16G002870 vs. TrEMBL
Match: F6HEG4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02270 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 129/245 (52.65%), Postives = 157/245 (64.08%), Query Frame = 1 

Query: 39  LMEVPLNEDSELPASADAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGKF 98
           LME+      +   S+    Q  D+V+P  +N G+ E  Q+I E E RG LE +AS GKF
Sbjct: 61  LMEISSENPQDSTISSSDADQNHDSVVPVLLNHGSTESDQDIPEEEGRGILEVMASTGKF 120

Query: 99  WHDWEKLKSMLSFQLKQVLSEYPEAK-ASGEQQSTLGETFPELVKRLDEALLSFIDGPPF 158
           WHDW+KLK++LSFQLKQVLSEYPEAK  + EQ S+LGET+ +LVKRLDE LLSFI+GPPF
Sbjct: 121 WHDWDKLKNLLSFQLKQVLSEYPEAKMTTDEQNSSLGETYLDLVKRLDEVLLSFIEGPPF 180

Query: 159 TLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIA 218
           TLQR+CE                     NLLVTSTLAI +DP   +   KP+  E PE  
Sbjct: 181 TLQRLCEIILDAQSIYPYLSKLALALEKNLLVTSTLAICTDPYPTTLVQKPD--EPPEKG 240

Query: 219 VEEQKHFSDVVENGI--EPIAGDRDEVMAEVEEADMNDGMTMDMEAL----VGSSETNSA 256
            EE     D V+NG+  EP  GD+DE+M EVEEAD+ + MT+DMEAL    VGSSETNS 
Sbjct: 241 SEEPVQHHDSVQNGVEAEPTQGDKDEIMTEVEEADIEEDMTIDMEALEEIVVGSSETNST 300

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BLAST of CmoCh16G002870 vs. TrEMBL
Match: W9QDF0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019701 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.8e-51
Identity = 131/241 (54.36%), Postives = 155/241 (64.32%), Query Frame = 1 

Query: 45  NEDSELPAS----ADAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGKFWH 104
           NED +   S    AD  H   ++++PD +N G  E K EI+E E RG LE IAS GKFWH
Sbjct: 4   NEDVQKSKSSSNEADHHHDYHEDMVPDVLNHGGAEPKYEIAEKEARGILEVIASTGKFWH 63

Query: 105 DWEKLKSMLSFQLKQVLSEYPEAKASGEQQ-STLGETFPELVKRLDEALLSFIDGPPFTL 164
           +W+KLK++LSFQLKQVLSEYPE K + EQQ ++LGETF EL KRL+EAL SF  GPPFTL
Sbjct: 64  EWDKLKAILSFQLKQVLSEYPETKMTSEQQNASLGETFTELAKRLEEALHSFDQGPPFTL 123

Query: 165 QRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIAVE 224
           QR+CE                     NLLVTS L IS+DP  P    +PN   EP+ A E
Sbjct: 124 QRLCEILLDARAIYPNLLKLALALEKNLLVTSMLTISTDP-YPHSTIEPN---EPDGASE 183

Query: 225 EQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEAL-----VGSSETNSAANN 255
           E K  SD VENGIE   GD+DEVM EVEEAD+ND MT+DMEAL      G SET++   N
Sbjct: 184 ELKQQSDSVENGIEHAVGDKDEVMVEVEEADINDNMTIDMEALEDIVVPGPSETSATPTN 240

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BLAST of CmoCh16G002870 vs. TrEMBL
Match: A0A067JG90_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00575 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 124/236 (52.54%), Postives = 155/236 (65.68%), Query Frame = 1 

Query: 45  NEDSELPASADAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGKFWHDWEK 104
           N D  +P   DA H Q DN   +++N G  E K  I+E E+RG LE IAS GKFWHDWEK
Sbjct: 8   NSDQPVPLPNDADHLQ-DNTASNSLNHGGAEPKPGIAEEEIRGILEVIASTGKFWHDWEK 67

Query: 105 LKSMLSFQLKQVLSEYPEAKASGE-QQSTLGETFPELVKRLDEALLSFIDGPPFTLQRIC 164
           LKSM+SF LKQVLSEYPEAK + E Q ++LGET+PELVKRLDEAL SF +GPPFTLQR+C
Sbjct: 68  LKSMISFYLKQVLSEYPEAKMTSEGQNASLGETYPELVKRLDEALHSFDEGPPFTLQRLC 127

Query: 165 E---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIAVEEQKH 224
           E                     NLLVTSTL + +DP  P    KP+E+++   A +E + 
Sbjct: 128 EILLAARSIYPNLSKAALALEKNLLVTSTLTVCTDP-YPQAMQKPDEVDK---ACDESQL 187

Query: 225 FSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAANNNS 256
                +NG++P+ GD DE+MAEV+EAD++D MT+DMEA   +VGSSE N     NS
Sbjct: 188 QPSSTQNGVQPMVGDGDEIMAEVQEADIDDDMTIDMEAFEEIVGSSEPNPTPTENS 238

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BLAST of CmoCh16G002870 vs. TAIR10
Match: AT5G17070.1 (AT5G17070.1 Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267))

HSP 1 Score: 164.9 bits (416), Expect = 6.7e-41
Identity = 105/223 (47.09%), Postives = 132/223 (59.19%), Query Frame = 1 

Query: 55  DAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGKFWHDWEKLKSMLSFQLK 114
           D V +Q   VLP+ +     EQ  ++SE EV+ TLEA+AS GKFW DWE LK  LS+ LK
Sbjct: 32  DGVQRQDHAVLPEVLEHPGAEQIADMSEEEVKRTLEAVASTGKFWQDWEILKGTLSYWLK 91

Query: 115 QVLSEYPEAKASGEQQ-STLGETFPELVKRLDEALLSFIDGPPFTLQRICE--------- 174
           +VLSEY EAK + EQQ   LGE + ELV RLDEALL F DGPPFTLQR+CE         
Sbjct: 92  KVLSEYSEAKMTDEQQKEALGEPYSELVSRLDEALLRFDDGPPFTLQRLCEILLAARSIY 151

Query: 175 ------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIAVEEQ-KHFSDVVENGI 234
                       NLLVTS LAIS+       +P+    E+P  A  E     +    N I
Sbjct: 152 PKLSKLALALEKNLLVTSMLAIST-------EPQSQTTEDPNTATSETITSAASCDPNVI 211

Query: 235 EPIAGDRDEVMAEVEEADMNDGMTMDMEALVGSSETNSAANNN 255
           E + GD+DE+M EVEEAD++D MT+DME +   SET +  + +
Sbjct: 212 ESMGGDKDEIMTEVEEADVDDAMTVDMETIDEPSETMTTTSES 247

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BLAST of CmoCh16G002870 vs. NCBI nr
Match: gi|778691726|ref|XP_011653338.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 9.0e-80
Identity = 177/242 (73.14%), Postives = 191/242 (78.93%), Query Frame = 1 

Query: 40  MEVPLNEDSELPASADAVHQQQDNVLP--DTINGGTMEQKQEISEVEVRGTLEAIASAGK 99
           MEVP NEDSELPASAD VHQ+QD+VLP  DTIN G MEQKQEI+E EVR TLEAIAS GK
Sbjct: 1   MEVPPNEDSELPASADTVHQEQDDVLPVPDTINDGVMEQKQEINEEEVRSTLEAIASTGK 60

Query: 100 FWHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQSTLGETFPELVKRLDEALLSFIDGPPF 159
           FW+DWEKLKSMLSFQLKQVLSEYPEAKAS EQQSTLGETF ELVKRLDEAL SF++GPPF
Sbjct: 61  FWYDWEKLKSMLSFQLKQVLSEYPEAKASSEQQSTLGETFSELVKRLDEALHSFVEGPPF 120

Query: 160 TLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIA 219
           TLQRICE                     NLLVTSTLA+SSD  +PS +PKPNE +E E A
Sbjct: 121 TLQRICEILLDACTIYPNLSKLALALEKNLLVTSTLAVSSDLHVPSSNPKPNESDESEKA 180

Query: 220 VEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAANN 256
            EEQK  S+ VENGIEPIAGD DEVM EVEEADMND MTMDME    +VGSSETN+A N+
Sbjct: 181 -EEQK-LSNAVENGIEPIAGDGDEVMVEVEEADMNDDMTMDMETFEEIVGSSETNNAPNS 240

[Close]
BLAST of CmoCh16G002870 vs. NCBI nr
Match: gi|659125920|ref|XP_008462921.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 1.0e-78
Identity = 178/242 (73.55%), Postives = 188/242 (77.69%), Query Frame = 1 

Query: 40  MEVPLNEDSELPASADAVHQQQDNVLP--DTINGGTMEQKQEISEVEVRGTLEAIASAGK 99
           MEVP  EDSELPASAD VHQ+QD+VLP  DTIN G MEQKQEI+E EVR TLEAIAS GK
Sbjct: 1   MEVPPIEDSELPASADTVHQEQDDVLPVPDTINDGVMEQKQEITEEEVRSTLEAIASTGK 60

Query: 100 FWHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQSTLGETFPELVKRLDEALLSFIDGPPF 159
           FWHDWEKLKSMLSFQLKQVLSEYPEAKAS E QSTLGETF ELVKRLDEAL SF++GPPF
Sbjct: 61  FWHDWEKLKSMLSFQLKQVLSEYPEAKASNELQSTLGETFSELVKRLDEALHSFVEGPPF 120

Query: 160 TLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIA 219
           TLQRICE                     NLLVTSTLAISSDP + S D KPNE E  E A
Sbjct: 121 TLQRICEILLDACSIYPNLSKLALALEKNLLVTSTLAISSDPHVQSSDKKPNESEGLEKA 180

Query: 220 VEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAANN 256
            EEQK  S+ VENGIEPIAGDRDEVM EVEEADMND MTMDME    +VGSSETN+A N+
Sbjct: 181 -EEQK-LSNAVENGIEPIAGDRDEVMVEVEEADMNDDMTMDMETFEEIVGSSETNNAPNS 240

[Close]
BLAST of CmoCh16G002870 vs. NCBI nr
Match: gi|659125924|ref|XP_008462923.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X2 [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 1.1e-64
Identity = 151/206 (73.30%), Postives = 159/206 (77.18%), Query Frame = 1 

Query: 74  MEQKQEISEVEVRGTLEAIASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQSTL 133
           MEQKQEI+E EVR TLEAIAS GKFWHDWEKLKSMLSFQLKQVLSEYPEAKAS E QSTL
Sbjct: 1   MEQKQEITEEEVRSTLEAIASTGKFWHDWEKLKSMLSFQLKQVLSEYPEAKASNELQSTL 60

Query: 134 GETFPELVKRLDEALLSFIDGPPFTLQRICE---------------------NLLVTSTL 193
           GETF ELVKRLDEAL SF++GPPFTLQRICE                     NLLVTSTL
Sbjct: 61  GETFSELVKRLDEALHSFVEGPPFTLQRICEILLDACSIYPNLSKLALALEKNLLVTSTL 120

Query: 194 AISSDPCLPSPDPKPNELEEPEIAVEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMND 253
           AISSDP + S D KPNE E  E A EEQK  S+ VENGIEPIAGDRDEVM EVEEADMND
Sbjct: 121 AISSDPHVQSSDKKPNESEGLEKA-EEQK-LSNAVENGIEPIAGDRDEVMVEVEEADMND 180

Query: 254 GMTMDMEA---LVGSSETNSAANNNS 256
            MTMDME    +VGSSETN+A N+NS
Sbjct: 181 DMTMDMETFEEIVGSSETNNAPNSNS 204

[Close]
BLAST of CmoCh16G002870 vs. NCBI nr
Match: gi|645257811|ref|XP_008234584.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Prunus mume])

HSP 1 Score: 227.6 bits (579), Expect = 2.4e-56
Identity = 133/243 (54.73%), Postives = 165/243 (67.90%), Query Frame = 1 

Query: 40  MEVPLNEDSE--LPASADAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGK 99
           ME+P NE+S+  + +++DA   Q + ++PD +N    E K E++E EVRG L  IAS GK
Sbjct: 1   MEMPSNENSQPSMNSTSDA-DNQHETIVPDGLNNACKESKYEVAEEEVRGILAVIASTGK 60

Query: 100 FWHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQ-STLGETFPELVKRLDEALLSFIDGPP 159
           FWHDW+KLKSMLSFQLKQVL EYPE K + EQQ ++LGET+PELVKRLDEAL SF +GPP
Sbjct: 61  FWHDWDKLKSMLSFQLKQVLLEYPEGKMADEQQIASLGETYPELVKRLDEALNSFTEGPP 120

Query: 160 FTLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEI 219
           FTLQR+CE                     NLLVT+ L +S+D   P P P      EP  
Sbjct: 121 FTLQRLCEILLDAQTTYPNLSKLALALEKNLLVTTMLTVSND---PYPQPMVQNSAEPNK 180

Query: 220 AVEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAAN 256
           A EE K  SD V+NG+EP+ GDRDEVMAEVE+AD++D MT+ +EA   +VGSSETNS   
Sbjct: 181 ATEEPKLHSDSVQNGVEPVVGDRDEVMAEVEQADIDDDMTIAIEAFEDIVGSSETNSVQT 239

[Close]
BLAST of CmoCh16G002870 vs. NCBI nr
Match: gi|596004159|ref|XP_007218292.1| (hypothetical protein PRUPE_ppa010709mg [Prunus persica])

HSP 1 Score: 227.3 bits (578), Expect = 3.1e-56
Identity = 133/242 (54.96%), Postives = 162/242 (66.94%), Query Frame = 1 

Query: 40  MEVPLNEDSE-LPASADAVHQQQDNVLPDTINGGTMEQKQEISEVEVRGTLEAIASAGKF 99
           ME+P NE+S+ L  S      Q + ++PD +N    E K E++E EVRG L  IAS GKF
Sbjct: 1   MEMPSNENSQPLMNSTSDADNQHETIVPDGLNNAYKESKHEVAEEEVRGILAVIASTGKF 60

Query: 100 WHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQ-STLGETFPELVKRLDEALLSFIDGPPF 159
           WHDW+KLKSMLSFQLKQVLSEYPE K + EQQ ++LGET+PELVKRLDEAL SF +GPPF
Sbjct: 61  WHDWDKLKSMLSFQLKQVLSEYPEGKMADEQQIASLGETYPELVKRLDEALNSFTEGPPF 120

Query: 160 TLQRICE---------------------NLLVTSTLAISSDPCLPSPDPKPNELEEPEIA 219
           TLQR+CE                     NLLVT+ L +S+D   P P P      EP+ A
Sbjct: 121 TLQRLCEILLDAQTTYPNLSKLAFALEKNLLVTTMLTVSTD---PYPQPMVQNSAEPKQA 180

Query: 220 VEEQKHFSDVVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAANN 256
            EE K  SD V+NG+E + GDRDEVMAEVE+AD++D MT+ +EA   +VGSSETNS   N
Sbjct: 181 TEEPKLHSDSVQNGVESMVGDRDEVMAEVEQADIDDDMTIAIEAFEDIVGSSETNSVQTN 239

The following BLAST results are available for this feature:
BLAST of CmoCh16G002870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G002870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0H6_CUCSA6.3e-8073.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092950 PE=4 SV=1[more]
M5X1Z4_PRUPE2.2e-5654.96Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010709mg PE=4 SV=1[more]
F6HEG4_VITVI1.6e-5152.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02270 PE=4 SV=... [more]
W9QDF0_9ROSA2.8e-5154.36Uncharacterized protein OS=Morus notabilis GN=L484_019701 PE=4 SV=1[more]
A0A067JG90_JATCU1.4e-5052.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00575 PE=4 SV=1[more]
BLAST of CmoCh16G002870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17070.16.7e-4147.09 Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267... [more]
BLAST of CmoCh16G002870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691726|ref|XP_011653338.1|9.0e-8073.14PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 [Cucumis ... [more]
gi|659125920|ref|XP_008462921.1|1.0e-7873.55PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X... [more]
gi|659125924|ref|XP_008462923.1|1.1e-6473.30PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X... [more]
gi|645257811|ref|XP_008234584.1|2.4e-5654.73PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Prunus... [more]
gi|596004159|ref|XP_007218292.1|3.1e-5654.96hypothetical protein PRUPE_ppa010709mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015267PPP4R2
Vocabulary: Cellular Component
TermDefinition
GO:0030289protein phosphatase 4 complex
Vocabulary: Molecular Function
TermDefinition
GO:0030362protein phosphatase type 4 regulator activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0030289 protein phosphatase 4 complex
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0030362 protein phosphatase type 4 regulator activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G002870.1CmoCh16G002870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015267Protein phosphatase 4 core regulatory subunit R2PANTHERPTHR16487PPP4R2-RELATED PROTEINcoord: 55..191
score: 1.9
IPR015267Protein phosphatase 4 core regulatory subunit R2PFAMPF09184PPP4R2coord: 76..164
score: 3.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G002870CmaCh16G002420Cucurbita maxima (Rimu)cmacmoB325
CmoCh16G002870CmaCh04G003830Cucurbita maxima (Rimu)cmacmoB705
CmoCh16G002870MELO3C024871Melon (DHL92) v3.5.1cmomeB295
CmoCh16G002870ClCG10G009050Watermelon (Charleston Gray)cmowcgB279
CmoCh16G002870Lsi03G009320Bottle gourd (USVL1VR-Ls)cmolsiB295
CmoCh16G002870Cp4.1LG01g03250Cucurbita pepo (Zucchini)cmocpeB318
CmoCh16G002870Cp4.1LG14g04890Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G002870MELO3C024871.2Melon (DHL92) v3.6.1cmomedB338
CmoCh16G002870Cla97C10G192260Watermelon (97103) v2cmowmbB323
CmoCh16G002870Bhi11G000838Wax gourdcmowgoB0420
CmoCh16G002870Carg19735Silver-seed gourdcarcmoB0402
CmoCh16G002870Carg08056Silver-seed gourdcarcmoB0511
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G002870CmoCh04G004050Cucurbita moschata (Rifu)cmocmoB289
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G002870Melon (DHL92) v3.6.1cmomedB339
CmoCh16G002870Silver-seed gourdcarcmoB0509
CmoCh16G002870Watermelon (97103) v2cmowmbB316
CmoCh16G002870Wax gourdcmowgoB0405
CmoCh16G002870Cucurbita moschata (Rifu)cmocmoB286
CmoCh16G002870Cucurbita maxima (Rimu)cmacmoB133
CmoCh16G002870Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G002870Cucurbita maxima (Rimu)cmacmoB701
CmoCh16G002870Melon (DHL92) v3.5.1cmomeB296
CmoCh16G002870Watermelon (Charleston Gray)cmowcgB273
CmoCh16G002870Watermelon (97103) v1cmowmB287
CmoCh16G002870Cucurbita pepo (Zucchini)cmocpeB311
CmoCh16G002870Bottle gourd (USVL1VR-Ls)cmolsiB294