CmaCh16G002420 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G002420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Serine/threonine-protein phosphatase 4 regulatory subunit 2
Location	Cma_Chr16 : 1104977 .. 1108000 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCCGCCGATGCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGGTATATAAGCACATCATTTCCTATATTTCCTGTAATTTTATTTTTGGTTCACGATGCTAGTTTGGATCTTGTTTTCTTATATTTTTGTAGTAGCTTCGTCCAAATCGCATAGAATACTTGTTACTCTGTTTGTGAATGTACAACTTCAATGAAGTTTCAAATTGCATGTTTTTACTTGGCTTATGTTTGCACGGCTGTAATGGGACCAGATATGGGCTACATTCAAATGGCTAGAATTCCATTTCATTTTCCAAGGATACCTTTAGCAACTCATAAAAAGTGATCTCTTTCTGCCTTCCGACTTTTTGTTCTTTGATTAACTTTTTTTAGAGAGGATGATAGAGTACGGTTTTTTGAGGATCCTTAACTTTTAAGATGAGCATTTCATGTCCAGCTGTTCTGGCTTGTTTATCCAGTGAGTTATATTTATTGTTTTGTAAAAGTATTTTTGTACCTGTAATTTCCAGAACCATGGAGCAGAAGCAAGAAATCACTGAGGTAGAAGTAAGCGGGACACTAGAAGCGATTGCATCCGCAGGGAAATTCTGGTATCTTTCTTCTCTACCTAATTTCTGTTGACGTAGGTATGAATATGAAGACGCTATATCAAAAATCTGATACAGTTCAGACTTTGGAAGTGTATGAATTTATACATCAGAATCTAAAGCACTTCGATATGTTGAATGCTTACCAAGTGCAATTTAAATAGGGAGGCCAAGGGGTTCATTGGTTGAATTCTGCTAGACTAGGTTTGTGGGAGGTTATTTTTTTAAAGAATAGGAGAATTGTTGTTCATGAAAAAACCCTTAAAATTGGAAGAATAAATCTATTGTAACAGTGTAATTTGTCCCCTTATAGAAACTTTAATTGGAGGTTTCTTTAGTATGCTCTTTTGGATGTAAGTCTACTCGTGGAACTTATGGCACACAATCAGCTACATAAAATATGAACTGTGTGGATCAGTTTAAAGTTTTCTTTTTGTTATGAACTTACAATATATATGTGTTTACGTACTTTATGTTCTCAGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTATGGGGAGGTACGCATGAATGCATTTCTTGTGTTTTTTAGCAGTGGATGTTTTAAAGTTCCTGCATAGGGGGCATGCATATCATATTTGTTGTATCCAGTTTTTTAGTGAAAATTTTGACTCCTTTTTTTCTTGCCTGCCTTTGAAGGTGCTGTCAGAATATCCTGAAGCTAAAACGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGGTTTGTGAGCTTCTCCACTTCCTATTGTTTACTGTAGATTTATTTGAAAAACCAAGTTCGGGCAGTAAACTACACTTCGAATCATTCAAGTGGTCATGCATTTTTGGAGTCACCTATCTAGTGTATAAAATATACTACCGGTCCTTTTACTACAAAATCCAGTCGAACAGTTCTCCTAGTAATTTGAGATTACAAAAAGCTCTCCGGATTGATCTCAATAAAAGAAAGTTTCCTTTATGAACTAGACGTAATTAAGATTTTTTATTTTTATTTTTTTGCAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGGTGATTATCCATATTCACTACAATGCAATTTCTTCCTATAAATTTTCATTTTTACTTTTTCGTTTATTAATTGTCAGTGAGACTGCAAATAATTGCTTTAAAGAATGCCATTGTTACCGACCTTAGCACTCTTGTACATCTTATTTGTTAGTTCTTGTTATTCAAACATTACAAAATCTTTTGCCAAATATCGAAATTTGAAGCGACCATATCTTGATTTTTTTTCCCCTTCCCTATTGGTCCTAATAATTTCAAAGACAGAAAAAGTTACAGTTAGAGCTTTTCTAATAGTTTCTTTTTTCTTTGCTGGTCTTTTGGGACATATTAGCATGACAAGAATTTGTATTAAATTTATTTAGCAAAATTATGATTCTCATCATTGTTTAAATATGTTCTCCAAAATTGATGACAAAACAGATCCTATTAGATGCGCGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGGTATGGAGTTTTCTTGATATTCTGTGTTTTTATTTATTTATTATTATTATTATTTTTTATGGACTCGTTTTTTATTTTATTTGGCATATCTGAATGCTGCCTGGTTTTTCTTCCTTTTTTCATTGTTCATTTAAAATTCTCATTTGTGGCCCCTCATTGATCTGTTTATATGTAGTGTTTTATCTTCGAAGATGATACTTATTTATTGGTTCACTATTAATGTAAACTAAATTTCCAATTTTATATAGGGGAAATATTATGGAAAATCTTTTTTGGCAGCTTTGTTTGGATTGATTATCTTTTATATTTAGGTCTTTTTCTTCCTCATGTATCTAATTTGTGCTTCTTCATTTCATCCACTTTTCTTACCTTGTAAAAGGAAAAGTTTTAAAGGAAGTATTACGATATTCTAATTTGTATTTAAATGTTGGTTGCATTATTATTCAATCTTAACCGTTCATATCTTGATAGGTAATGCTTAATATCATGTCTAATTATTCAAACTTTACGTTTATAGAATCTTTTGGTGACATCCACGCTTGCCATCAGTTCTGACCCACGTTTACCGTCCTCTGACCCAAAGCCAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCCGATGCAGTAGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGTGAACAATAATTCTTAG

mRNA sequence

ATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCCGCCGATGCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGAACCATGGAGCAGAAGCAAGAAATCACTGAGGTAGAAGTAAGCGGGACACTAGAAGCGATTGCATCCGCAGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTGCTGTCAGAATATCCTGAAGCTAAAACGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGATCCTATTAGATGCGCGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGAATCTTTTGGTGACATCCACGCTTGCCATCAGTTCTGACCCACGTTTACCGTCCTCTGACCCAAAGCCAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCCGATGCAGTAGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGTGAACAATAATTCTTAG

Coding sequence (CDS)

ATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCCGCCGATGCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGAACCATGGAGCAGAAGCAAGAAATCACTGAGGTAGAAGTAAGCGGGACACTAGAAGCGATTGCATCCGCAGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTGCTGTCAGAATATCCTGAAGCTAAAACGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGATCCTATTAGATGCGCGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGAATCTTTTGGTGACATCCACGCTTGCCATCAGTTCTGACCCACGTTTACCGTCCTCTGACCCAAAGCCAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCCGATGCAGTAGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGTGAACAATAATTCTTAG

Protein sequence

MEVPLNEDSELPASADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGETFPELVKRLDEALLSFIDGPPFTLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIAVEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEALVGSSETNSAVNNNS

Homology

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BLAST of CmaCh16G002420 vs. Swiss-Prot
Match: PP4R2_DROME (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Drosophila melanogaster GN=PPP4R2r PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08
Identity = 38/120 (31.67%), Postives = 58/120 (48.33%), Query Frame = 1


Query: 38  KQEITEVEVSGTLEAIASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGET 97
           KQ+    E+   L+ +A  G     W  LK +   +L  V+  + E     E+       
Sbjct: 21  KQKEIPKELEEYLQYVAKTGDTIFKWSSLKYLFREKLLSVIKHFNEDSPRLEEIPNYPNV 80

Query: 98  FPELVKRLDEALLSFID---GPPFTLQRICEILLDARSIYPNLSKLALALEKNLLVTSTL 155
            P   + +  +LL  +D     PFT+QR+CE+L+D R  Y  + K   ALEKN+LV ST+
Sbjct: 81  DPFNYETMKSSLLERLDLFNAAPFTVQRLCELLIDPRKQYSRIDKFMRALEKNILVVSTI 140

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BLAST of CmaCh16G002420 vs. Swiss-Prot
Match: P4R2B_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 2-B OS=Xenopus laevis GN=ppp4r2-b PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 1


Query: 53  IASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGET------FPELVKRLD 112
           +A  G+    W + K    F+L++V+ ++   +TS  +Q            F E+ +R+ 
Sbjct: 32  VAKTGETVVQWPQFKEYFLFKLEKVMDDF---RTSAPEQRGPPNPNVEYIPFDEMKQRIL 91

Query: 113 EALLSFIDGPPFTLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSD 172
           + + SF +G PFT+QR+CE+L D R  Y    K    +EKN++V S +  SS+     S 
Sbjct: 92  KIVASF-NGTPFTIQRLCELLTDPRRNYTGTDKFLRGVEKNIMVVSCVYPSSEKNTSPSL 151

Query: 173 PKPNELEEP 176
            + N +  P
Sbjct: 152 NRMNGVMFP 156

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BLAST of CmaCh16G002420 vs. Swiss-Prot
Match: P4R2A_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 2-A OS=Xenopus laevis GN=ppp4r2-a PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.0e-06
Identity = 41/144 (28.47%), Postives = 72/144 (50.00%), Query Frame = 1


Query: 38  KQEITEVEVSGTLEAIASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGET 97
           K+E++  E+   L  +A  G+    W + K    F+L+ V+ ++   +TS  +Q      
Sbjct: 18  KKEVSP-ELDQFLCHVAKTGETVVQWPQFKEYFVFKLEMVMDDF---RTSAPEQRGSPNP 77

Query: 98  ------FPELVKRLDEALLSFIDGPPFTLQRICEILLDARSIYPNLSKLALALEKNLLVT 157
                 F E+ +R+ + +  F +G PFT+QR+CE+L D R  Y    K    +EKN++V 
Sbjct: 78  NVEYIPFDEMKQRILKIVTGF-NGTPFTIQRLCELLTDPRKNYNGTDKFLRGVEKNIMVV 137

Query: 158 STLAISSDPRLPSSDPKPNELEEP 176
           S +  SS+    +S  + N +  P
Sbjct: 138 SCVYPSSEKNNSTSLNRMNGVMFP 156

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BLAST of CmaCh16G002420 vs. TrEMBL
Match: A0A0A0L0H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092950 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 6.0e-93
Identity = 196/242 (80.99%), Postives = 210/242 (86.78%), Query Frame = 1


Query: 1   MEVPLNEDSELPASADAVHQQQDNVLP--DTINGGTMEQKQEITEVEVSGTLEAIASAGK 60
           MEVP NEDSELPASAD VHQ+QD+VLP  DTIN G MEQKQEI E EV  TLEAIAS GK
Sbjct: 1   MEVPPNEDSELPASADTVHQEQDDVLPVPDTINDGVMEQKQEINEEEVRSTLEAIASTGK 60

Query: 61  FWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGETFPELVKRLDEALLSFIDGPPF 120
           FW+DWEKLKSMLSFQLKQVLSEYPEAK S EQQSTLGETF ELVKRLDEAL SF++GPPF
Sbjct: 61  FWYDWEKLKSMLSFQLKQVLSEYPEAKASSEQQSTLGETFSELVKRLDEALHSFVEGPPF 120

Query: 121 TLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIA 180
           TLQRICEILLDA +IYPNLSKLALALEKNLLVTSTLA+SSD  +PSS+PKPNE +E E A
Sbjct: 121 TLQRICEILLDACTIYPNLSKLALALEKNLLVTSTLAVSSDLHVPSSNPKPNESDESEKA 180

Query: 181 VEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVNN 238
            EEQK  S+AVENGIEPIAGD DEVM EVEEADMND MTMDME    +VGSSETN+A N+
Sbjct: 181 -EEQK-LSNAVENGIEPIAGDGDEVMVEVEEADMNDDMTMDMETFEEIVGSSETNNAPNS 240

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BLAST of CmaCh16G002420 vs. TrEMBL
Match: M5X1Z4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010709mg PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.9e-67
Identity = 148/242 (61.16%), Postives = 179/242 (73.97%), Query Frame = 1


Query: 1   MEVPLNEDSE-LPASADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKF 60
           ME+P NE+S+ L  S      Q + ++PD +N    E K E+ E EV G L  IAS GKF
Sbjct: 1   MEMPSNENSQPLMNSTSDADNQHETIVPDGLNNAYKESKHEVAEEEVRGILAVIASTGKF 60

Query: 61  WHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQ-STLGETFPELVKRLDEALLSFIDGPPF 120
           WHDW+KLKSMLSFQLKQVLSEYPE K + EQQ ++LGET+PELVKRLDEAL SF +GPPF
Sbjct: 61  WHDWDKLKSMLSFQLKQVLSEYPEGKMADEQQIASLGETYPELVKRLDEALNSFTEGPPF 120

Query: 121 TLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIA 180
           TLQR+CEILLDA++ YPNLSKLA ALEKNLLVT+ L +S+DP      P      EP+ A
Sbjct: 121 TLQRLCEILLDAQTTYPNLSKLAFALEKNLLVTTMLTVSTDPY---PQPMVQNSAEPKQA 180

Query: 181 VEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVNN 238
            EE K  SD+V+NG+E + GDRDEVMAEVE+AD++D MT+ +EA   +VGSSETNS   N
Sbjct: 181 TEEPKLHSDSVQNGVESMVGDRDEVMAEVEQADIDDDMTIAIEAFEDIVGSSETNSVQTN 239

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BLAST of CmaCh16G002420 vs. TrEMBL
Match: W9QDF0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019701 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.5e-64
Identity = 150/241 (62.24%), Postives = 175/241 (72.61%), Query Frame = 1


Query: 6   NEDSELPAS----ADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKFWH 65
           NED +   S    AD  H   ++++PD +N G  E K EI E E  G LE IAS GKFWH
Sbjct: 4   NEDVQKSKSSSNEADHHHDYHEDMVPDVLNHGGAEPKYEIAEKEARGILEVIASTGKFWH 63

Query: 66  DWEKLKSMLSFQLKQVLSEYPEAKTSGEQQS-TLGETFPELVKRLDEALLSFIDGPPFTL 125
           +W+KLK++LSFQLKQVLSEYPE K + EQQ+ +LGETF EL KRL+EAL SF  GPPFTL
Sbjct: 64  EWDKLKAILSFQLKQVLSEYPETKMTSEQQNASLGETFTELAKRLEEALHSFDQGPPFTL 123

Query: 126 QRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIAVE 185
           QR+CEILLDAR+IYPNL KLALALEKNLLVTS L IS+DP  P S  +PN   EP+ A E
Sbjct: 124 QRLCEILLDARAIYPNLLKLALALEKNLLVTSMLTISTDP-YPHSTIEPN---EPDGASE 183

Query: 186 EQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEAL-----VGSSETNSAVNN 237
           E K  SD+VENGIE   GD+DEVM EVEEAD+ND MT+DMEAL      G SET++   N
Sbjct: 184 ELKQQSDSVENGIEHAVGDKDEVMVEVEEADINDNMTIDMEALEDIVVPGPSETSATPTN 240

[Close]

BLAST of CmaCh16G002420 vs. TrEMBL
Match: F6HEG4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02270 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-64
Identity = 146/244 (59.84%), Postives = 177/244 (72.54%), Query Frame = 1


Query: 1   MEVPLNEDSELPASADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKFW 60
           ME+      +   S+    Q  D+V+P  +N G+ E  Q+I E E  G LE +AS GKFW
Sbjct: 62  MEISSENPQDSTISSSDADQNHDSVVPVLLNHGSTESDQDIPEEEGRGILEVMASTGKFW 121

Query: 61  HDWEKLKSMLSFQLKQVLSEYPEAK-TSGEQQSTLGETFPELVKRLDEALLSFIDGPPFT 120
           HDW+KLK++LSFQLKQVLSEYPEAK T+ EQ S+LGET+ +LVKRLDE LLSFI+GPPFT
Sbjct: 122 HDWDKLKNLLSFQLKQVLSEYPEAKMTTDEQNSSLGETYLDLVKRLDEVLLSFIEGPPFT 181

Query: 121 LQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIAV 180
           LQR+CEI+LDA+SIYP LSKLALALEKNLLVTSTLAI +DP   +   KP+  E PE   
Sbjct: 182 LQRLCEIILDAQSIYPYLSKLALALEKNLLVTSTLAICTDPYPTTLVQKPD--EPPEKGS 241

Query: 181 EEQKHFSDAVENGI--EPIAGDRDEVMAEVEEADMNDGMTMDMEAL----VGSSETNSAV 238
           EE     D+V+NG+  EP  GD+DE+M EVEEAD+ + MT+DMEAL    VGSSETNS  
Sbjct: 242 EEPVQHHDSVQNGVEAEPTQGDKDEIMTEVEEADIEEDMTIDMEALEEIVVGSSETNSTP 301

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BLAST of CmaCh16G002420 vs. TrEMBL
Match: A0A067JG90_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00575 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.0e-63
Identity = 142/236 (60.17%), Postives = 174/236 (73.73%), Query Frame = 1


Query: 6   NEDSELPASADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKFWHDWEK 65
           N D  +P   DA H Q DN   +++N G  E K  I E E+ G LE IAS GKFWHDWEK
Sbjct: 8   NSDQPVPLPNDADHLQ-DNTASNSLNHGGAEPKPGIAEEEIRGILEVIASTGKFWHDWEK 67

Query: 66  LKSMLSFQLKQVLSEYPEAKTSGE-QQSTLGETFPELVKRLDEALLSFIDGPPFTLQRIC 125
           LKSM+SF LKQVLSEYPEAK + E Q ++LGET+PELVKRLDEAL SF +GPPFTLQR+C
Sbjct: 68  LKSMISFYLKQVLSEYPEAKMTSEGQNASLGETYPELVKRLDEALHSFDEGPPFTLQRLC 127

Query: 126 EILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIAVEEQKH 185
           EILL ARSIYPNLSK ALALEKNLLVTSTL + +DP  P +  KP+E+++   A +E + 
Sbjct: 128 EILLAARSIYPNLSKAALALEKNLLVTSTLTVCTDP-YPQAMQKPDEVDK---ACDESQL 187

Query: 186 FSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVNNNS 238
              + +NG++P+ GD DE+MAEV+EAD++D MT+DMEA   +VGSSE N     NS
Sbjct: 188 QPSSTQNGVQPMVGDGDEIMAEVQEADIDDDMTIDMEAFEEIVGSSEPNPTPTENS 238

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BLAST of CmaCh16G002420 vs. TAIR10
Match: AT5G17070.1 (AT5G17070.1 Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267))

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-53
Identity = 123/223 (55.16%), Postives = 154/223 (69.06%), Query Frame = 1


Query: 16  DAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKFWHDWEKLKSMLSFQLK 75
           D V +Q   VLP+ +     EQ  +++E EV  TLEA+AS GKFW DWE LK  LS+ LK
Sbjct: 32  DGVQRQDHAVLPEVLEHPGAEQIADMSEEEVKRTLEAVASTGKFWQDWEILKGTLSYWLK 91

Query: 76  QVLSEYPEAKTSGEQQS-TLGETFPELVKRLDEALLSFIDGPPFTLQRICEILLDARSIY 135
           +VLSEY EAK + EQQ   LGE + ELV RLDEALL F DGPPFTLQR+CEILL ARSIY
Sbjct: 92  KVLSEYSEAKMTDEQQKEALGEPYSELVSRLDEALLRFDDGPPFTLQRLCEILLAARSIY 151

Query: 136 PNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIAVEEQKHFSDAVE-NGI 195
           P LSKLALALEKNLLVTS LAIS++P+  ++       E+P  A  E    + + + N I
Sbjct: 152 PKLSKLALALEKNLLVTSMLAISTEPQSQTT-------EDPNTATSETITSAASCDPNVI 211

Query: 196 EPIAGDRDEVMAEVEEADMNDGMTMDMEALVGSSETNSAVNNN 237
           E + GD+DE+M EVEEAD++D MT+DME +   SET +  + +
Sbjct: 212 ESMGGDKDEIMTEVEEADVDDAMTVDMETIDEPSETMTTTSES 247

[Close]

BLAST of CmaCh16G002420 vs. NCBI nr
Match: gi|778691726|ref|XP_011653338.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 8.6e-93
Identity = 196/242 (80.99%), Postives = 210/242 (86.78%), Query Frame = 1


Query: 1   MEVPLNEDSELPASADAVHQQQDNVLP--DTINGGTMEQKQEITEVEVSGTLEAIASAGK 60
           MEVP NEDSELPASAD VHQ+QD+VLP  DTIN G MEQKQEI E EV  TLEAIAS GK
Sbjct: 1   MEVPPNEDSELPASADTVHQEQDDVLPVPDTINDGVMEQKQEINEEEVRSTLEAIASTGK 60

Query: 61  FWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGETFPELVKRLDEALLSFIDGPPF 120
           FW+DWEKLKSMLSFQLKQVLSEYPEAK S EQQSTLGETF ELVKRLDEAL SF++GPPF
Sbjct: 61  FWYDWEKLKSMLSFQLKQVLSEYPEAKASSEQQSTLGETFSELVKRLDEALHSFVEGPPF 120

Query: 121 TLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIA 180
           TLQRICEILLDA +IYPNLSKLALALEKNLLVTSTLA+SSD  +PSS+PKPNE +E E A
Sbjct: 121 TLQRICEILLDACTIYPNLSKLALALEKNLLVTSTLAVSSDLHVPSSNPKPNESDESEKA 180

Query: 181 VEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVNN 238
            EEQK  S+AVENGIEPIAGD DEVM EVEEADMND MTMDME    +VGSSETN+A N+
Sbjct: 181 -EEQK-LSNAVENGIEPIAGDGDEVMVEVEEADMNDDMTMDMETFEEIVGSSETNNAPNS 240

[Close]

BLAST of CmaCh16G002420 vs. NCBI nr
Match: gi|659125920|ref|XP_008462921.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 199/242 (82.23%), Postives = 208/242 (85.95%), Query Frame = 1


Query: 1   MEVPLNEDSELPASADAVHQQQDNVLP--DTINGGTMEQKQEITEVEVSGTLEAIASAGK 60
           MEVP  EDSELPASAD VHQ+QD+VLP  DTIN G MEQKQEITE EV  TLEAIAS GK
Sbjct: 1   MEVPPIEDSELPASADTVHQEQDDVLPVPDTINDGVMEQKQEITEEEVRSTLEAIASTGK 60

Query: 61  FWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTLGETFPELVKRLDEALLSFIDGPPF 120
           FWHDWEKLKSMLSFQLKQVLSEYPEAK S E QSTLGETF ELVKRLDEAL SF++GPPF
Sbjct: 61  FWHDWEKLKSMLSFQLKQVLSEYPEAKASNELQSTLGETFSELVKRLDEALHSFVEGPPF 120

Query: 121 TLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIA 180
           TLQRICEILLDA SIYPNLSKLALALEKNLLVTSTLAISSDP + SSD KPNE E  E A
Sbjct: 121 TLQRICEILLDACSIYPNLSKLALALEKNLLVTSTLAISSDPHVQSSDKKPNESEGLEKA 180

Query: 181 VEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVNN 238
            EEQK  S+AVENGIEPIAGDRDEVM EVEEADMND MTMDME    +VGSSETN+A N+
Sbjct: 181 -EEQK-LSNAVENGIEPIAGDRDEVMVEVEEADMNDDMTMDMETFEEIVGSSETNNAPNS 240

[Close]

BLAST of CmaCh16G002420 vs. NCBI nr
Match: gi|659125924|ref|XP_008462923.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X2 [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 4.2e-79
Identity = 172/206 (83.50%), Postives = 179/206 (86.89%), Query Frame = 1


Query: 35  MEQKQEITEVEVSGTLEAIASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQSTL 94
           MEQKQEITE EV  TLEAIAS GKFWHDWEKLKSMLSFQLKQVLSEYPEAK S E QSTL
Sbjct: 1   MEQKQEITEEEVRSTLEAIASTGKFWHDWEKLKSMLSFQLKQVLSEYPEAKASNELQSTL 60

Query: 95  GETFPELVKRLDEALLSFIDGPPFTLQRICEILLDARSIYPNLSKLALALEKNLLVTSTL 154
           GETF ELVKRLDEAL SF++GPPFTLQRICEILLDA SIYPNLSKLALALEKNLLVTSTL
Sbjct: 61  GETFSELVKRLDEALHSFVEGPPFTLQRICEILLDACSIYPNLSKLALALEKNLLVTSTL 120

Query: 155 AISSDPRLPSSDPKPNELEEPEIAVEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMND 214
           AISSDP + SSD KPNE E  E A EEQK  S+AVENGIEPIAGDRDEVM EVEEADMND
Sbjct: 121 AISSDPHVQSSDKKPNESEGLEKA-EEQK-LSNAVENGIEPIAGDRDEVMVEVEEADMND 180

Query: 215 GMTMDMEA---LVGSSETNSAVNNNS 238
            MTMDME    +VGSSETN+A N+NS
Sbjct: 181 DMTMDMETFEEIVGSSETNNAPNSNS 204

[Close]

BLAST of CmaCh16G002420 vs. NCBI nr
Match: gi|645257811|ref|XP_008234584.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Prunus mume])

HSP 1 Score: 265.4 bits (677), Expect = 9.6e-68
Identity = 149/243 (61.32%), Postives = 183/243 (75.31%), Query Frame = 1


Query: 1   MEVPLNEDSE--LPASADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGK 60
           ME+P NE+S+  + +++DA   Q + ++PD +N    E K E+ E EV G L  IAS GK
Sbjct: 1   MEMPSNENSQPSMNSTSDA-DNQHETIVPDGLNNACKESKYEVAEEEVRGILAVIASTGK 60

Query: 61  FWHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQ-STLGETFPELVKRLDEALLSFIDGPP 120
           FWHDW+KLKSMLSFQLKQVL EYPE K + EQQ ++LGET+PELVKRLDEAL SF +GPP
Sbjct: 61  FWHDWDKLKSMLSFQLKQVLLEYPEGKMADEQQIASLGETYPELVKRLDEALNSFTEGPP 120

Query: 121 FTLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEI 180
           FTLQR+CEILLDA++ YPNLSKLALALEKNLLVT+ L +S+D   P   P      EP  
Sbjct: 121 FTLQRLCEILLDAQTTYPNLSKLALALEKNLLVTTMLTVSND---PYPQPMVQNSAEPNK 180

Query: 181 AVEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVN 238
           A EE K  SD+V+NG+EP+ GDRDEVMAEVE+AD++D MT+ +EA   +VGSSETNS   
Sbjct: 181 ATEEPKLHSDSVQNGVEPVVGDRDEVMAEVEQADIDDDMTIAIEAFEDIVGSSETNSVQT 239

[Close]

BLAST of CmaCh16G002420 vs. NCBI nr
Match: gi|596004159|ref|XP_007218292.1| (hypothetical protein PRUPE_ppa010709mg [Prunus persica])

HSP 1 Score: 263.8 bits (673), Expect = 2.8e-67
Identity = 148/242 (61.16%), Postives = 179/242 (73.97%), Query Frame = 1


Query: 1   MEVPLNEDSE-LPASADAVHQQQDNVLPDTINGGTMEQKQEITEVEVSGTLEAIASAGKF 60
           ME+P NE+S+ L  S      Q + ++PD +N    E K E+ E EV G L  IAS GKF
Sbjct: 1   MEMPSNENSQPLMNSTSDADNQHETIVPDGLNNAYKESKHEVAEEEVRGILAVIASTGKF 60

Query: 61  WHDWEKLKSMLSFQLKQVLSEYPEAKTSGEQQ-STLGETFPELVKRLDEALLSFIDGPPF 120
           WHDW+KLKSMLSFQLKQVLSEYPE K + EQQ ++LGET+PELVKRLDEAL SF +GPPF
Sbjct: 61  WHDWDKLKSMLSFQLKQVLSEYPEGKMADEQQIASLGETYPELVKRLDEALNSFTEGPPF 120

Query: 121 TLQRICEILLDARSIYPNLSKLALALEKNLLVTSTLAISSDPRLPSSDPKPNELEEPEIA 180
           TLQR+CEILLDA++ YPNLSKLA ALEKNLLVT+ L +S+DP      P      EP+ A
Sbjct: 121 TLQRLCEILLDAQTTYPNLSKLAFALEKNLLVTTMLTVSTDPY---PQPMVQNSAEPKQA 180

Query: 181 VEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEA---LVGSSETNSAVNN 238
            EE K  SD+V+NG+E + GDRDEVMAEVE+AD++D MT+ +EA   +VGSSETNS   N
Sbjct: 181 TEEPKLHSDSVQNGVESMVGDRDEVMAEVEQADIDDDMTIAIEAFEDIVGSSETNSVQTN 239

The following BLAST results are available for this feature:

BLAST of CmaCh16G002420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP4R2_DROME	2.9e-08	31.67	Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Drosophila melano...	[more]
P4R2B_XENLA	2.8e-06	29.46	Serine/threonine-protein phosphatase 4 regulatory subunit 2-B OS=Xenopus laevis ...	[more]
P4R2A_XENLA	8.0e-06	28.47	Serine/threonine-protein phosphatase 4 regulatory subunit 2-A OS=Xenopus laevis ...	[more]

BLAST of CmaCh16G002420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0H6_CUCSA	6.0e-93	80.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092950 PE=4 SV=1	[more]
M5X1Z4_PRUPE	1.9e-67	61.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010709mg PE=4 SV=1	[more]
W9QDF0_9ROSA	1.5e-64	62.24	Uncharacterized protein OS=Morus notabilis GN=L484_019701 PE=4 SV=1	[more]
F6HEG4_VITVI	5.9e-64	59.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02270 PE=4 SV=...	[more]
A0A067JG90_JATCU	5.0e-63	60.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00575 PE=4 SV=1	[more]

BLAST of CmaCh16G002420 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17070.1	1.1e-53	55.16	Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267...	[more]

BLAST of CmaCh16G002420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691726\|ref\|XP_011653338.1\|	8.6e-93	80.99	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 [Cucumis ...	[more]
gi\|659125920\|ref\|XP_008462921.1\|	1.1e-92	82.23	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X...	[more]
gi\|659125924\|ref\|XP_008462923.1\|	4.2e-79	83.50	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X...	[more]
gi\|645257811\|ref\|XP_008234584.1\|	9.6e-68	61.32	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Prunus...	[more]
gi\|596004159\|ref\|XP_007218292.1\|	2.8e-67	61.16	hypothetical protein PRUPE_ppa010709mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015267	PPP4R2

Vocabulary: **Cellular Component**
Term	Definition
GO:0030289	protein phosphatase 4 complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0030362	protein phosphatase type 4 regulator activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0030289	protein phosphatase 4 complex
molecular_function	GO:0019888	protein phosphatase regulator activity
molecular_function	GO:0030362	protein phosphatase type 4 regulator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G002420.1	CmaCh16G002420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015267	Protein phosphatase 4 core regulatory subunit R2	PANTHER	PTHR16487	PPP4R2-RELATED PROTEIN	coord: 16..173 score: 6.2
IPR015267	Protein phosphatase 4 core regulatory subunit R2	PFAM	PF09184	PPP4R2	coord: 36..216 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G002420	MELO3C024871	Melon (DHL92) v3.5.1	cmameB308
CmaCh16G002420	ClCG10G009050	Watermelon (Charleston Gray)	cmawcgB280
CmaCh16G002420	CmoCh16G002870	Cucurbita moschata (Rifu)	cmacmoB325
CmaCh16G002420	CmoCh04G004050	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G002420	Lsi03G009320	Bottle gourd (USVL1VR-Ls)	cmalsiB307
CmaCh16G002420	Cp4.1LG01g03250	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G002420	Cp4.1LG14g04890	Cucurbita pepo (Zucchini)	cmacpeB346
CmaCh16G002420	MELO3C024871.2	Melon (DHL92) v3.6.1	cmamedB359
CmaCh16G002420	Cla97C10G192260	Watermelon (97103) v2	cmawmbB332
CmaCh16G002420	Bhi11G000838	Wax gourd	cmawgoB0410
CmaCh16G002420	Carg08056	Silver-seed gourd	carcmaB0526

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G002420	CmaCh04G003830	Cucurbita maxima (Rimu)	cmacmaB351

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G002420	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G002420	Bottle gourd (USVL1VR-Ls)	cmalsiB323
CmaCh16G002420	Cucumber (Gy14) v2	cgybcmaB493
CmaCh16G002420	Melon (DHL92) v3.6.1	cmamedB355
CmaCh16G002420	Melon (DHL92) v3.6.1	cmamedB357
CmaCh16G002420	Silver-seed gourd	carcmaB1206
CmaCh16G002420	Cucumber (Chinese Long) v3	cmacucB0387
CmaCh16G002420	Watermelon (97103) v2	cmawmbB352
CmaCh16G002420	Wax gourd	cmawgoB0440
CmaCh16G002420	Cucumber (Gy14) v1	cgycmaB0196
CmaCh16G002420	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G002420	Wild cucumber (PI 183967)	cmacpiB337
CmaCh16G002420	Cucumber (Chinese Long) v2	cmacuB332
CmaCh16G002420	Melon (DHL92) v3.5.1	cmameB304
CmaCh16G002420	Melon (DHL92) v3.5.1	cmameB306
CmaCh16G002420	Watermelon (Charleston Gray)	cmawcgB302
CmaCh16G002420	Watermelon (97103) v1	cmawmB313