CmoCh04G004050 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTTCTGCTTGGATCCAAAATCGGAAAGGAAAACTCTCAGGAACCGACGACTCGGGTCGGGTCGGGTCGGGTCGTAGAGCGTTGTCGTAGTCGGGCAACTTGTCGTGCACGTCAGTTTGATGAAAATTATGAAATAACGATTACCGGATTTGGATATACGTGTAATTTTAAAATTTTTAATTAAATTGGATTAAATCTCTTAAAATAAATATCTAATTTAGTTCCTATAATTTTAAATTTTTTAATTAAATTTAATTAAATCTCTTAAAATAAATACCGACCACTATTATATAGGTAACTAATTCATATTCGATAAAAAATTTTTAGTTCGGTTAGTTGAAGCTCGTCGGCATTTTTATGACATTCAATTTACTTGCTATGATGCAGTGAGAGGCTCGCCCTAACCGGATAGGAATTTTGACCGAGGAATAAAAAATGGAGAGGGGAGATATTTCTACCCATTAGACAAACGAGGCCGGAGATGAGATTTTCGTCTCCGTCCTTACCCAATTCCCCGTCTCACCCGACCTCTTCCCCAATTTTTTATATATAAAATAAATAATTTATTTCCCGTCTCACCCTTTTTTTTTTTGTGTGAAATACCATGCTATGATATTAAATTTTTATTTTTTTTCGAAATTAGGTAAGTAATTCATTATATTATTATTATTATTATTATTTTGTGTGTGAACATTGTATCAAAATTTTGTTCAATTTTTTTAATAAAAATCATGTAGTAAAATGGTAATTATGCTTTTAATTTTTTTTTTGAAATAAAAAAATTAAAAACTCAGAGAAAATTGTGGCCCAATGTTCGGCAGAACTGGGCCTTCCCCCACAAGACCTTTTGCTATCATTTTCTTCCCCACTCGGTCCAAAGGTCTCGTCTGTAGCTCGCTTCAGTTGAGATCGTCTTCAACCTCGCGAGGTAAGCTCCATCGCTCGCTCGCTCGCTCGATTCTGCTTGCTCACTGTGTAAATTATTTTAAAGAAGCAACGGAAATGTTTATTTTCGCGGATTTTCAATCTTATTTCTCATTGTTCGTTATTAATTAGTTTTATTGTTCCATTTCATTTCAGTTTTAATATTGTTTGTTAGTTGTATTCTTGGTATGCCTATATAAAGGTTACGGTACTTTAATCACTCATCGATGAGAAAATTTCTCTTGGAATCATTTCTCTCTGTATATTCTGTTTCTTGCTGCGATTCTGTGAGTATCCGCTGTGGGCTTATTTGTAGTTAGGTGATGAAATTAATGGAACTTTGGAGGTCTCTACTCCTATAAAATTAGTTTGTGGCTTGTTTTCCTCGGTTTCGTTGGGATCCCCGTTTTGCAGTGTTATTTTCCCTGTTTCTAAATGGAAGTTTTGTTAGTATAGTTATGATTATTTCATAATGGAACTGCAATGGTTATATCTTTGTTAACATCTTAAGCAGGTGGAAAGTAGAGATCTCTTGATGGAGGTGCCACCGAATGAAGATTCTGAGCACCCAGTAAATTCTTCCATTGATACCGTTCATCCACAACAGGATAATGTGCTCCCTGATACCGTAAATGACGGGTATATAAGCACGTCACTTCTTGTATTTGCTGTAATGTTTATTTTGGGGGTCATGATGGTCGGTTGCGATCTTGTTATCTTAATATTGGTTGTAGCTTCTCCCACATTGTGTAGAATCGTTGTATCACTGTTAGTCAAAATACAACTTATATTGTAACCGCCCAAGCCCACCGCTAACAGATATTGACTGCTTTGGCCCGTATTGTCGTCAGCCTCATGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCTCTCTCCAACCGATTAGAGTTTCAAATTGCTTGCTTTTACTTCGCTGATGTTTTTATTTTGGTTGTAATGGGAGCAAGTTTGGGTTTCCTTCAATTTCAGTTCGTTTTCTGAGGGCACCTTTAGCAACTAGTTAAAACTGTTTTTTTTTTCTTCCTTCTGAGTTTTTGTTCTTTCATTGCCTTTTTGTAGAGATTATAGTAGAGTATGGTTTCGGGATGATCCGTAGATTTATAGAGAGAGCATTTTATTTGCTTCTACCGTCAGTTATGTTTTATCTGTTTGAATGTGATTTTTTGAACTTGTAATTTTCAGAGTCATGGAGCAGAAGCAGGTAATCAATGAGGAAGAAATAAGAGGTACAATCGAAGCAATTGCATCCACGGGGAAATTCTGGTATTTTTCTTCTCCATCTAATTTCCATTGACTTAGTATGAGTATAAAATGCTGCATCAAACATCTGGTTAGAAGTTGTGAGATCCCATGTCGGTTGGAAACCAGAATGAAGCATTCTTTATAAGGGTGTTGAAACGTCTCCCTAATAGACGTGTTTTAAAACCTTGAGAGAAAGCCCAAAAGCGAAAGCCTAAGAGGACAATATTTGCTAGCTGTGTGCTTGAGCTGTTACAAATGGTATCAGAGCCAGATACTGTGCGGTGTGCCAGTGAGGACGCTAGAACTCCAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAATGAAGCGTTCACTATTAGGATGTGGAAACCTCTCCCTAACTAACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTATTAGCGGTGGGCTTAGACTGTTACAAATGGTATTAGAGCTAGATACCGGGCAGTGTGTCATGAGGACGCAAGACCCCAAGGGGGTGGATGGTGAGATCCCACATCGGTTGGAGATGGAACGAAACATTCTTAAGGGTGTGAAAACCTCCCCCCAACAGACGCATTTTAAAGTCTTGAGGGGAAGCTCGAATGGGAAAGTCCAAGAATGACAATATCTGCTAACAGTGACCTTAGGTTGTTACAGAAGTGTACAGATTTAGACCTCAAAATCTAAAGTGCTTTGATATGTTGAAAGAGGAGAATTATTGTTCTTGAAAAAACCTTCACAAATTGAAAGAATTAATCAGTTTAACATTTTCTTATTGTTTTGAACTTACAGTATATATGTGTGTATATGTATGTTATGTTCTCAGGCATGATTGGGAGAAATTGAAGAGCATGCTATCCTTTCAGCTGAAGCAGGTATGGGGAGGTACGCATGAATGCATTTCGTTTGTTATTTTCCAGTGAATGCTTTATGGTTATTGCATAGCGGGCATGCATATCATATTTGTTATATCCAGTTTTTTTTATGAAAATTTTGAAACCTTCTTATTTTCCTTTCTCTCCTGCCTTTGAAGGTGCTGTCCGAGTATCCTGAAGCGAAAGCGTCCGGTGAACAAAGTACTTTAGGGGAACCCTTCCCGGAGCTGGTAAAGCGGCTCGATGAAGGTTTATGAGCTTCTCCACTTCCTATTGTTTACCGTTGATTTATTTGTAAACTGTTTTTCTCTTCCTTTTGGTATTTTTGTTTTACAAAACTTATGATCACCGGAGAAGGTCTCGTTACTGTGTAACTTTGATGTCATGTCGGTCATGTAAATTCCTGATCAACAGTCGTTCTTTTGAAGCCTTAGTCGATTAGTTATTAATCTACTTGAGATGTGGGCGAGATTTAGAACTGGTAGTGTACTTGAGTTTGAAGCATTAGAATGAGACGGGCTCGTTCTAGTTTTTCCTTTTTCGTGTTTTTGTTCGTATAAGAAGTAGATTTCATTCAAATTCAAGGAAGAGGGAGACAGCATTTTACTTAATTCAATATGTTTTTTTGGATTGCAGCACTTCTTAGCTTCATTGAAGGTCCTCCATTTACCCTTCAAAGGATTTGTGAGGTGATTGTCCATGTTCACTACAATGCTATTTCTTTCTTTACATTTTCATATTTAATTTTTTTGTTCGTTCATTAATTATTAGTGAGACGGATAAAGAACGTGCTCCTTACCAACCTCGAACTCTTGTCAAACCTTATTAGTTAGCAGTTGTCCAAAAATTAGATAATTTTTATCAAATATCGAAATTTGACTAAATATTTTCTCTAAAATTGACGTCGAAACAGATCCTATTGGATGCACGGGGCGTCTATCCCAAACTCTCAAAGCTTGTGCTAGCCCTGGAAAAGGTATGGCGTTTTCTGGTGTCGATCTTCGGTTTGTTTTTTGTTTGGTTTTCTGATATTGCATTATTATTATCGAATCATGACGATTAATCTTGATGAGGTAATACTCGATATCATGTCTAATTATTTGAAGTTTACATTTATAGAATCTTTTGGTGACATCCACACTCGCCATCAGTCCTGCCCCGAGTCTACCGTCATCCAACAAAAAGCCAAATGAGTCGGAGGAGGCAGAGAAAGGTGTGGAAGAACAAAAGCATTCAGCAGATGTAGTAGAAAATGGAGTTGAAGGTGTAGGTGGAGACAGGGATGAGGTAATGACGGAGGTTGAAGAGGCCGACATGAATGATGATATGACAATAGACATAGCCCTTGAAGAAATAGTTGGATCATCTGAGACAACAAATTCGGCTGCAAACAGTAAATCTTAGCCTTCCTCAGTTCTGCTAATCTCTTCTTCTACGTCGAGGGAGCGACTCGACACGGCCGATAATCCATAGTTCTTTGACATGTCAATTTGTTCAATCCAATATAATTCGGCTCGGATGTTGCTTGGATGTTTTCTTGATTGGATATTTGAGTGATCACTATGTTCTTGGCTTCTTAACTTTTGATATAGCATAGTCCATCGGCCATTGAAAATGTGGTTTGTTCCCTTTGCAACTGTTGTTTTCTTCTAATCCTTCATGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG ATGTCTCTTCTGCTTGGATCCAAAATCGGAAAGGAAAACTCTCAGGAACCGACGACTCGGGTCGGGTCGGGTCGGGTCGTAGAGCGTTGTCGTAGTCGGGCAACTTGTCGTGCACATCGTCTTCAACCTCGCGAGGTGGAAAGTAGAGATCTCTTGATGGAGGTGCCACCGAATGAAGATTCTGAGCACCCAGTAAATTCTTCCATTGATACCGTTCATCCACAACAGGATAATGTGCTCCCTGATACCGTAAATGACGGAGTCATGGAGCAGAAGCAGGTAATCAATGAGGAAGAAATAAGAGGTACAATCGAAGCAATTGCATCCACGGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTATCCTTTCAGCTGAAGCAGGTGCTGTCCGAGTATCCTGAAGCGAAAGCGTCCGGTGAACAAAGTACTTTAGGGGAACCCTTCCCGGAGCTGGTAAAGCGGCTCGATGAAGCACTTCTTAGCTTCATTGAAGGTCCTCCATTTACCCTTCAAAGGATTTGTGAGATCCTATTGGATGCACGGGGCGTCTATCCCAAACTCTCAAAGCTTGTGCTAGCCCTGGAAAAGAATCTTTTGGTGACATCCACACTCGCCATCAGTCCTGCCCCGAGTCTACCGTCATCCAACAAAAAGCCAAATGAGTCGGAGGAGGCAGAGAAAGGTGTGGAAGAACAAAAGCATTCAGCAGATGTAGTAGAAAATGGAGTTGAAGGTGTAGGTGGAGACAGGGATGAGGTAATGACGGAGGTTGAAGAGGCCGACATGAATGATGATATGACAATAGACATAGCCCTTGAAGAAATAGTTGGATCATCTGAGACAACAAATTCGGCTGCAAACAGTAAATCTTAGCCTTCCTCAGTTCTGCTAATCTCTTCTTCTACGTCGAGGGAGCGACTCGACACGGCCGATAATCCATAGTTCTTTGACATGTCAATTTGTTCAATCCAATATAATTCGGCTCGGATGTTGCTTGGATGTTTTCTTGATTGGATATTTGAGTGATCACTATGTTCTTGGCTTCTTAACTTTTGATATAGCATAGTCCATCGGCCATTGAAAATGTGGTTTGTTCCCTTTGCAACTGTTGTTTTCTTCTAATCCTTCATGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG ATGTCTCTTCTGCTTGGATCCAAAATCGGAAAGGAAAACTCTCAGGAACCGACGACTCGGGTCGGGTCGGGTCGGGTCGTAGAGCGTTGTCGTAGTCGGGCAACTTGTCGTGCACATCGTCTTCAACCTCGCGAGGTGGAAAGTAGAGATCTCTTGATGGAGGTGCCACCGAATGAAGATTCTGAGCACCCAGTAAATTCTTCCATTGATACCGTTCATCCACAACAGGATAATGTGCTCCCTGATACCGTAAATGACGGAGTCATGGAGCAGAAGCAGGTAATCAATGAGGAAGAAATAAGAGGTACAATCGAAGCAATTGCATCCACGGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTATCCTTTCAGCTGAAGCAGGTGCTGTCCGAGTATCCTGAAGCGAAAGCGTCCGGTGAACAAAGTACTTTAGGGGAACCCTTCCCGGAGCTGGTAAAGCGGCTCGATGAAGCACTTCTTAGCTTCATTGAAGGTCCTCCATTTACCCTTCAAAGGATTTGTGAGATCCTATTGGATGCACGGGGCGTCTATCCCAAACTCTCAAAGCTTGTGCTAGCCCTGGAAAAGAATCTTTTGGTGACATCCACACTCGCCATCAGTCCTGCCCCGAGTCTACCGTCATCCAACAAAAAGCCAAATGAGTCGGAGGAGGCAGAGAAAGGTGTGGAAGAACAAAAGCATTCAGCAGATGTAGTAGAAAATGGAGTTGAAGGTGTAGGTGGAGACAGGGATGAGGTAATGACGGAGGTTGAAGAGGCCGACATGAATGATGATATGACAATAGACATAGCCCTTGAAGAAATAGTTGGATCATCTGAGACAACAAATTCGGCTGCAAACAGTAAATCTTAG
BLAST of CmoCh04G004050 vs. Swiss-Prot
Match: P4R2B_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 2-B OS=Xenopus laevis GN=ppp4r2-b PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07 Identity = 46/152 (30.26%), Postives = 74/152 (48.68%), Query Frame = 1
BLAST of CmoCh04G004050 vs. Swiss-Prot
Match: P4R2A_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 2-A OS=Xenopus laevis GN=ppp4r2-a PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.8e-07 Identity = 46/152 (30.26%), Postives = 73/152 (48.03%), Query Frame = 1
BLAST of CmoCh04G004050 vs. Swiss-Prot
Match: PP4R2_XENTR (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Xenopus tropicalis GN=ppp4r2 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.4e-07 Identity = 50/177 (28.25%), Postives = 83/177 (46.89%), Query Frame = 1
BLAST of CmoCh04G004050 vs. Swiss-Prot
Match: PP4R2_PONAB (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Pongo abelii GN=PPP4R2 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07 Identity = 45/152 (29.61%), Postives = 73/152 (48.03%), Query Frame = 1
BLAST of CmoCh04G004050 vs. Swiss-Prot
Match: PP4R2_HUMAN (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Homo sapiens GN=PPP4R2 PE=1 SV=3) HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07 Identity = 45/152 (29.61%), Postives = 73/152 (48.03%), Query Frame = 1
BLAST of CmoCh04G004050 vs. TrEMBL
Match: A0A0A0L0H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092950 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84 Identity = 188/245 (76.73%), Postives = 207/245 (84.49%), Query Frame = 1
BLAST of CmoCh04G004050 vs. TrEMBL
Match: M5X1Z4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010709mg PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.5e-61 Identity = 142/242 (58.68%), Postives = 177/242 (73.14%), Query Frame = 1
BLAST of CmoCh04G004050 vs. TrEMBL
Match: A0A067JG90_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00575 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 8.3e-60 Identity = 140/234 (59.83%), Postives = 170/234 (72.65%), Query Frame = 1
BLAST of CmoCh04G004050 vs. TrEMBL
Match: A0A067E5W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025581mg PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.4e-59 Identity = 147/252 (58.33%), Postives = 177/252 (70.24%), Query Frame = 1
BLAST of CmoCh04G004050 vs. TrEMBL
Match: F6HEG4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02270 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.4e-59 Identity = 148/250 (59.20%), Postives = 181/250 (72.40%), Query Frame = 1
BLAST of CmoCh04G004050 vs. TAIR10
Match: AT5G17070.1 (AT5G17070.1 Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267)) HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51 Identity = 131/256 (51.17%), Postives = 166/256 (64.84%), Query Frame = 1
BLAST of CmoCh04G004050 vs. NCBI nr
Match: gi|778691726|ref|XP_011653338.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 [Cucumis sativus]) HSP 1 Score: 320.9 bits (821), Expect = 2.4e-84 Identity = 188/245 (76.73%), Postives = 207/245 (84.49%), Query Frame = 1
BLAST of CmoCh04G004050 vs. NCBI nr
Match: gi|659125920|ref|XP_008462921.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 [Cucumis melo]) HSP 1 Score: 320.1 bits (819), Expect = 4.1e-84 Identity = 189/245 (77.14%), Postives = 205/245 (83.67%), Query Frame = 1
BLAST of CmoCh04G004050 vs. NCBI nr
Match: gi|659125924|ref|XP_008462923.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X2 [Cucumis melo]) HSP 1 Score: 280.4 bits (716), Expect = 3.6e-72 Identity = 163/207 (78.74%), Postives = 175/207 (84.54%), Query Frame = 1
BLAST of CmoCh04G004050 vs. NCBI nr
Match: gi|1009123409|ref|XP_015878526.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 247.7 bits (631), Expect = 2.6e-62 Identity = 145/237 (61.18%), Postives = 179/237 (75.53%), Query Frame = 1
BLAST of CmoCh04G004050 vs. NCBI nr
Match: gi|645257811|ref|XP_008234584.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Prunus mume]) HSP 1 Score: 245.7 bits (626), Expect = 9.7e-62 Identity = 144/242 (59.50%), Postives = 176/242 (72.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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