Carg19735 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGCGGCATCGGGCCTGGGCCTTAAATCGCCTCACCGGAGACTTGCTCTCATTTGCTTCACCAGTCGGTCCGAGCGTCTCGGCTGTAGCTCGCTTCAGTTGAGATCATCTTCAAGCTCACTAGGTAAGTTCCGTCGCTTGCTCGATTCTGTCTGGTCACTATGTAAAGGAATTAGAAATAATTGAAATGCTGCTTTAACGAATTATCTTTTACTTGTTTGTTGCTGAATCGGTGCCCCTTTATTTTAGCTGTATACTGTACGATGATGGCGATGTTATGAATAGTGTTTGCTTTGGGCTTATTTTGTTAGTGAAGTGAAGTTGTAAGCTTCAAGGAACTGGCGTCTTTTTTATTTCGATTTTGTTTCTATATTTGTGTTTGGGTTTAGTCAGTTGTATTGAAGTGATGATATTATGGTCCAAGTTAACTTTTAGAGATCTGACGTCTGAGTTCTTCCATAAGCTAATTTTTTAGGCCTGAGTTCCTATAGAATTAGTCTGTCATCCATTTCATTTTCTTCAAGATCAGATAAATGCTTCATGTTTGGTTTAGCGAATTCTTACTTCTAAAAACGGGATAATAGTTGTGTTAGATGCTAGAACTGATTTCCATCGATTAAAATTGCAAGAAATAGGGAATAGATAAGATATGTACCCATTCAAGAAAAGATCTCGCTAAAGAAGCTCCTTTTGGCATTTGTAAATAGTTAGGGGAAGAAAAACGTAAATGGTGGTGGTCATCCAGTGCTTTGAAAGACTGTGGCTCTCTCATTATTCTTCGGTGGGTTTGGTATTGGAAGAATTAGAAAGAGAAATGAGTTTTGTTATCAAAATGGCTTCTGTGCTTACCAATTATGTCTGTGTTTCCTTCTTTCTTTGCTTTCATTGATAGTCCTTTGTTCTTGATGTATATAATTGGTGCCCTCGGGATTAATTGGAATTGCGTTTCATTTGTTCTGGCAGGCTTCTTTTTGTTTAGCTTTTTTCGGTTTCGTTGGGGTCCCCCTTTGCAGTGTTATTTATCCTCTCTGTACTTCCATATTTCTTTATGGAAGTCTTACTATAATTATGACTTTTTTTTTTTAACTATGCTTTAGTACACTATGCCAATGGAACTGCAATATTTATATCATTGGTTACATCGTAAGCAGGTGGAAAGTAGACATCGCTAGATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCTGCCAATTCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGGTATATAAGCACATCATTTCTCTTATTTCCTGTAATTTTATTTTTGGTTCACGATGTTAGTTTGTGATCTTGTTTTCTTATATTTTTGTAGTAGCTTCTTCCAAATCGCATAGAATACTTGTTACTCTGTTTGTGAATTTACAACTGCTATGAAGTTTCAAATTGCATGTTTTTACTTGGCTTATGTTTGCACGGCTGTAATGGGACAGGTATGGGTTACATTCAAATGGCTAGAATTCCATTTCATTTTCCAAGAACACCTTTAGCAACTCATAAAAAGTGATCCCTTTCTGCCTTCCGACTTTTTGTTCTTTGATTAACTTTTTGTAGAGAGGATGATAGAGTATGGTTTTTTGAGGATCCTTAACTTTTAAGATGAGCATTTCATGTCCAGCTGTTCTGGCTTGTTTATCCAGTGAGTTATATATATTGTGTTGTAAAAGTATTTTTGTACCTGTAATTTCCAGAACCATGGAGCAGAAGCAAGAAATCACTGAGGTAGAAGTAAGAGGGACACTAGAAGCGATTGCATCCGCAGGGAAATTCTGGTATCTTTCTTCTCCACCTAATTTCTGTTGATGTAGGTATGAATATGAAGACGCTATATCAAAAATCTGATACAGTTCAGACTTTGGAAGTGTATGAATTTATACAACAGAATCTAAAGCACTTCGATATGTTGAATGCTTACCAAGTGCAATTTAAATAGGGAGGCCAAGGGGTTCATTGGTTGAATTCTGCTAGACTAGGTTTGTGGGAGGTTTTTTTTTTTTTAAAGAATAGGAGAATTGTTGTTCATGAAAAAACCCTTAAAATTGGAAGAATAAATCTATTGTAACACTGTAATTTGTCCCCTTATAGAAACTTTAATTGGAGGTTTCTTTAGTATGCTCTTTTGGATGTAGGTCTACCCGTGGAACTTATGGCACACAATCAGCTACATAAAATATGAACTGTGTGGATCAGTTTAAAGTTTTCTTTTTGTTATGAACTTACAATATATATATGTGTGTACGTACTTTATGTTCTCAGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTATGGGGAGGTACGCATGAATGCATTTCTTGTGACTTTTAGCAGTGGATGTTTTAAAGTTCTTGCATAGGGGGCATGCATATCATATTTGTTGTATCCAGTTTTTTAGTGAAAATTTTGACTCTTTTTTTTTCTTGCCTGCCTTTGAAGGTGCTGTCAGAATATCCTGAAGCTAAAGCGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGGTTTGTGAGCTTCTCCACTTCCTATTGTTTACTGTAGATTTATTTGAAAAACCAAGTTCGGGCAGTAAACTACACTTTGAATCATTCAAGTGGTCATGCATTTTTGGAGTCACCTATCTAGTGTATAAAATATACTACCGGTCCTTCTACTACAAAATCCAGTCGTACAGTTCTAGTAATTTGAGATTACAAAAAGCTCTCCGGATTGATCTCAATAAAAGAAAGTTTCCTTTATGAGCCAGACGTAATTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGGTGATTATCCATATTCACTACAATGCAATTTCTTCCTATAAATTTTCATTTTTACTTTTTCGTTTATTAATTGTCAGTGAGACTGCAAATAATGCTTTAAAGAATGCCATTGTTACCGACCTTAGCACTCTTGTACATCTTATTTGTTAGTTCTTGTTATTCAAACATTACAAAATCTTTTGCCAAATATCGAAATTTGAAGCGACCATATCTTAATTTTTTTTTCCCCCTTCCCCACTGGTCCTAATAATTTCAAAGACAGAAAAAGTTACAGTTAGAGCTTTTCTAATAGTTTCTTTTTTCTTTGCTGGTCTTTTGGGACATATTAGCATGACAAGAATTCGTATTAAATTGATTTAGCAAAATTATGATTCTCATCATTGTTTAAATATGTTCTCCAAAATTGATGACAAAACAGATCCTATTAGATGCACGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGGTATGATGGAGTTTTCTTGACGTTCTGTGTTTTATTTATTTTTATTTTTTTTTATGGACTCGTTTTGTATTTTATTTGGCATATCTGAATGCTGCCTGGTTTTTCTTCCTTTTTTCATTGTTCATTTAAAAATTCTCATTTGTGGCCCCTCATTGAACTGTTTATATGTAGTGTTTTATCTTCAAAGGTGATACTTATTTGTTGGTTCACTATTAATGTAAACTAAATTTCTAATTTTATAAAGGGGAAATATTATGGAAAATCTTTTTTGGGAGCTTTGTTTGGGTTGATTCTCTTTTATATTTAGGTCTTTTTCTTCCTCATGTATCTAACTTGTGCTTCTTCATTTCATCCACTTTTCTTTCCTTGTAAAAGGAAAAGTCTTAACGGAAGTATTATGATATTCTAATTTGTATTTAAATGTTGGTCGCATTATTATTCAATCATAACCGTTCATATCTTGATAGGTAATGCTTAATATCATGTCTAATTATTCTAACTTTACGTTTATAGAATCTTTTGGTGACATCCATGCTTGCCATCAGTTCTGACCCACGTTTACCGTCCCCCGACCCAAAGCAAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCTGATGCAGTTGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGCGAACAATAATTCTTAGCCTTCATGACGCACCTTAAGCTGGCTGCTGTAGTTCTTCTGCTAATCTCTTTTGGGGAAGAGCCATGGCTGGTACAATATAGATCGTTCATTCCAATATTGAAGAAC TTGGCGGCATCGGGCCTGGGCCTTAAATCGCCTCACCGGAGACTTGCTCTCATTTGCTTCACCAGTCGGTCCGAGCGTCTCGGCTGTAGCTCGCTTCAGTTGAGATCATCTTCAAGCTCACTAGGTGGAAAGTAGACATCGCTAGATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCTGCCAATTCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGAACCATGGAGCAGAAGCAAGAAATCACTGAGGTAGAAGTAAGAGGGACACTAGAAGCGATTGCATCCGCAGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTGCTGTCAGAATATCCTGAAGCTAAAGCGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGATCCTATTAGATGCACGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGAATCTTTTGGTGACATCCATGCTTGCCATCAGTTCTGACCCACGTTTACCGTCCCCCGACCCAAAGCAAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCTGATGCAGTTGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGCGAACAATAATTCTTAGCCTTCATGACGCACCTTAAGCTGGCTGCTGTAGTTCTTCTGCTAATCTCTTTTGGGGAAGAGCCATGGCTGGTACAATATAGATCGTTCATTCCAATATTGAAGAAC ATGGAGGTGCCACTAAATGAAGATTCAGAGCTCCCAGCTTCTGCCAATTCCGTTCATCAACAACAGGATAATGTTCTCCCTGATACCATAAATGGCGGAACCATGGAGCAGAAGCAAGAAATCACTGAGGTAGAAGTAAGAGGGACACTAGAAGCGATTGCATCCGCAGGGAAATTCTGGCATGATTGGGAGAAATTGAAGAGCATGCTTTCCTTTCAACTGAAGCAGGTGCTGTCAGAATATCCTGAAGCTAAAGCGTCTGGCGAACAACAAAGTACTTTAGGAGAAACCTTCCCGGAACTGGTAAAGCGGCTGGATGAAGCACTTCTTAGCTTCATTGATGGTCCTCCATTTACCCTTCAGAGGATTTGTGAGATCCTATTAGATGCACGTAGCATTTATCCCAATCTCTCAAAGCTTGCGCTTGCTCTGGAAAAGAATCTTTTGGTGACATCCATGCTTGCCATCAGTTCTGACCCACGTTTACCGTCCCCCGACCCAAAGCAAAACGAGTTAGAAGAGCCAGAGATAGCTGTGGAAGAACAAAAGCATTTCTCTGATGCAGTTGAAAACGGAATTGAACCTATAGCTGGAGACAGGGATGAAGTAATGGCAGAGGTTGAAGAGGCCGATATGAATGATGGTATGACGATGGACATGGAAGCCTTAGTTGGATCATCTGAAACAAATTCTGCTGCGAACAATAATTCTTAG MEVPLNEDSELPASANSVHQQQDNVLPDTINGGTMEQKQEITEVEVRGTLEAIASAGKFWHDWEKLKSMLSFQLKQVLSEYPEAKASGEQQSTLGETFPELVKRLDEALLSFIDGPPFTLQRICEILLDARSIYPNLSKLALALEKNLLVTSMLAISSDPRLPSPDPKQNELEEPEIAVEEQKHFSDAVENGIEPIAGDRDEVMAEVEEADMNDGMTMDMEALVGSSETNSAANNNS
BLAST of Carg19735 vs. NCBI nr
Match: XP_022922518.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 437.2 bits (1123), Expect = 3.6e-119 Identity = 230/237 (97.05%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Carg19735 vs. NCBI nr
Match: XP_022922519.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 [Cucurbita moschata] >XP_022922520.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 [Cucurbita moschata] >XP_022922522.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 [Cucurbita moschata] >XP_022922523.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 [Cucurbita moschata] >XP_022922524.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 437.2 bits (1123), Expect = 3.6e-119 Identity = 230/237 (97.05%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Carg19735 vs. NCBI nr
Match: XP_023553485.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553486.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553487.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553488.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 435.3 bits (1118), Expect = 1.4e-118 Identity = 231/237 (97.47%), Postives = 231/237 (97.47%), Query Frame = 0
BLAST of Carg19735 vs. NCBI nr
Match: XP_022984225.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like [Cucurbita maxima] >XP_022984226.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like [Cucurbita maxima] >XP_022984227.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like [Cucurbita maxima] >XP_022984228.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like [Cucurbita maxima] >XP_022984229.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like [Cucurbita maxima] >XP_022984230.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like [Cucurbita maxima]) HSP 1 Score: 434.9 bits (1117), Expect = 1.8e-118 Identity = 229/237 (96.62%), Postives = 231/237 (97.47%), Query Frame = 0
BLAST of Carg19735 vs. NCBI nr
Match: XP_023553489.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99 Identity = 198/203 (97.54%), Postives = 198/203 (97.54%), Query Frame = 0
BLAST of Carg19735 vs. TAIR10
Match: AT5G17070.1 (Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267)) HSP 1 Score: 207.6 bits (527), Expect = 8.4e-54 Identity = 121/207 (58.45%), Postives = 147/207 (71.01%), Query Frame = 0
BLAST of Carg19735 vs. Swiss-Prot
Match: sp|Q9W2U4|PP4R2_DROME (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Drosophila melanogaster OX=7227 GN=PPP4R2r PE=1 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07 Identity = 37/120 (30.83%), Postives = 57/120 (47.50%), Query Frame = 0
BLAST of Carg19735 vs. Swiss-Prot
Match: sp|Q6DCQ0|P4R2B_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 2-B OS=Xenopus laevis OX=8355 GN=ppp4r2-b PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 9.6e-07 Identity = 34/112 (30.36%), Postives = 60/112 (53.57%), Query Frame = 0
BLAST of Carg19735 vs. Swiss-Prot
Match: sp|Q5M7D6|P4R2A_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 2-A OS=Xenopus laevis OX=8355 GN=ppp4r2-a PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of Carg19735 vs. Swiss-Prot
Match: sp|Q28IG6|PP4R2_XENTR (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Xenopus tropicalis OX=8364 GN=ppp4r2 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 38/136 (27.94%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of Carg19735 vs. Swiss-Prot
Match: sp|Q0VGB7|PP4R2_MOUSE (Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Mus musculus OX=10090 GN=Ppp4r2 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of Carg19735 vs. TrEMBL
Match: tr|A0A1S3CHZ8|A0A1S3CHZ8_CUCME (serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501186 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 4.7e-91 Identity = 197/242 (81.40%), Postives = 208/242 (85.95%), Query Frame = 0
BLAST of Carg19735 vs. TrEMBL
Match: tr|A0A0A0L0H6|A0A0A0L0H6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G092950 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 6.8e-82 Identity = 182/242 (75.21%), Postives = 194/242 (80.17%), Query Frame = 0
BLAST of Carg19735 vs. TrEMBL
Match: tr|A0A2P5CN26|A0A2P5CN26_9ROSA (Protein phosphatase 4 core regulatory subunit R OS=Trema orientalis OX=63057 GN=TorRG33x02_279390 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 9.2e-71 Identity = 159/242 (65.70%), Postives = 187/242 (77.27%), Query Frame = 0
BLAST of Carg19735 vs. TrEMBL
Match: tr|M5X1Z4|M5X1Z4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G324400 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.0e-69 Identity = 151/242 (62.40%), Postives = 183/242 (75.62%), Query Frame = 0
BLAST of Carg19735 vs. TrEMBL
Match: tr|A0A2P5AY24|A0A2P5AY24_PARAD (Protein phosphatase 4 core regulatory subunit R OS=Parasponia andersonii OX=3476 GN=PanWU01x14_289090 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 8.6e-69 Identity = 157/242 (64.88%), Postives = 183/242 (75.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|