CmoCh15G005580 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G005580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein EPIDERMAL PATTERNING FACTOR 2
Location	Cmo_Chr15 : 2665527 .. 2669676 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATGCCCTAAAGAAGGTGAAACTTTTTCCTATCTATATGCTAGTTGTTTAATATATACACACACACACACATATATAATATACACATAACATATGCTTTGTGTGTTTGGATGGTTCTATTCTGCAGCTACATACATTATTAAGACGCTTTTACATAATGTAGGATGATATAATAATATAATGCTACCGAGTGTAGTAGTCGTAGTAGTAGTAAAGTAAAGAAGGCGAGTTCAGTAGTAGAGGAATCATAAGCTCTCAATTATTATTAGTGTATTTCTGGGAACTTAAAACGTACTTGTTGCTTTTGAATGTTTATACTATATTGGATATTTTTCTTGAATTTGCTTTATTGTGACATTCATGCATTTGATTTTTTTTTTTTTAAATAATTTTTAACAATATTACTAAGATGGGTATGGGGGATGAATGAGGGATTTGAGCTTTAAGGGGTTCAAGTTGGCATATTCATGCATCTGGTTGGGGGTGCTTGTTTATTGTGAACCAGCCAACAAACAAGGAGTTAATTGGATTTAAATGATGAGGGGATGAATTTTTCTTGTTTTTATTTTATTATTGTTATTATTATTATTATTATTATTTTTAATTCACTTTGAAGTTCGTATTTTCAACTTTCAACTTTGTCTAATACGTATTTTGTATTTTGTATTTTAGTAAATCTTTGAATTTTTAAAAAAATTGGAAGTTTGGGTACTTTTTTGTCGTTTTAAATGTTCAGAAATAGATAAAATTCTCAAAAAAACTTAAATTAATATCTTGCGTTTGAACTTTTTCATTTAAACCTACAACTTCATTTATCCGTAGATAAATAAATTTAAAAAAAAACGTTAATTTATATTCCAAAGTTCTTACGAAAGTTTTGAGCTTTAATTAATACAATTATTTGTCAAGTTTTTTAATGGATATAATTAAATAAATAAGGGGTATAATTTATTTATTTATTTTCTCTAAATTATATTATTGGATAATGAAAGTCATGAGAGCATCATAAGGTAATGCAAGAGCTAAATTCCTTACAAGCTGGCTTCCGTTCCTTTCCTTAGCTTTGGTTTTCTATCCTTCACTTCCTTCTCCTGTAGACAAGGGTTAAACTATTCTTTCAAGGCTGGATGATCTGCTCCTACTCGAGCTTTCTTTCATATGCGGTCATGTAATATGTCGACAATATCATACCATTGTGGATAGTTGTATTTGTCTAACATGGTATCAGAACTATGCCCTAAACTTAGTCATGTCAATAGATTGAATTTCCTCGAATGTCGAACAAAAGACTCCAAAAGAAAAGGAGTCAAACCAGCTCGAAGGCATAGTAAAAAATGACTAACACTCCAAAAGAGTCGAGCCTCGATTAAGAGGAGGCGTACTTTGTTCGATGAGAGATGTTGGATAATGAAAGTCACACATCGGCTAATTTAGGGAATGATCATAGGTTTATAATCAAATAATACTCTCACCATTGATATGAGGCCTTCTGAGAAGCCTAAAACAAAGCCATAAGAATTTATACTCAAAGTGGACAATATTATATCATTGGGGAGAGTCGTGTTCGTCGTAAAACTGATAGCAGAAGTTCATTGAATGGCAGCAGCAAAGGGAGGAGTGTTCTTCAATTTCTGCTCCCCCACTGCACTACACTACACGTGAACTTCTCCTGTCGTGTAGCAACTAAAACCCTACTGCACTTTTGTTCTTTAGACAGACAACAAGAGAGAGAACGAACCATTTTACCCAAATAATTTCCCCATTTCCCATTCACTTTGGACTATAATCCTCCCTTCACCCCTCCCTCAAAAGACAACAAAAGAGAGCTGAAAAGGTCAGGGGTGAAAGAAACTTAACAAAGCGTTCATAATCATATCATATACACACTGATTGTTACTTACAGAATCACTTAGAGTGCAATGCTGCCTTTGGTTGGGAATCCACAAACAGAAATGTCCTCTGTCAGTCGATTTCCCTTCTCGAGCTGGATGTTTGTTGTCCCAACCATTTTTCTAAGTTCAAAGTGATTCCGGCACGTAGGTTCATAACCAAACCAACTACTCCAACAGCACTCATCTATAAACCCGTTACGGGTACAAATAACATAAAGAAATGTAATCAACGTAACCCAAAAGATATGGGACCAAAAGCAGCCCAAGAGTCCAGACCTTTGAACTCCAGAAAAATCTGCAAAAACAGGAGGATGAAAACGAAGAATTGGTTTATAGTTCGGTAGCAAATTAAAAATCATAAAGAACACTAAAAATCCAAACATAATCAGAATATTGTTTTTACAAATAAACCCACCAAACAGAAAATGCACTAAATTCATTTCATTCCATTTATCTGGAAAAGAGCATAGACAATTCAAGCAGCTTCAATTACATGTACAGAATTTCCCAATCTTACGTTGTTGGCAATAATATCCAACTGGAAAACGACCGCTAGACTTGAAAATGATTTTCAACCTTCCTCCACCTCTATGGGATGCAACATTTATCAACACCTGAAACCACATTGACTATAAATGTATTTACCTACCATTGCAACACAACACATGAAGATAAAAATGTATCCACTTGTCACAATCGCACTTTTCTTCTCTTCTCGGCAGTAAGTGAGTCAAGCCAATTTGTGTTCACGTCACCTATGGCCGGACAACGTATTGCTCAAGCCTTTGACCCCGATTTGAAAAGAAGGTTTTAGAAAACAAAGACAAAGAGATTTTAAAAGGGAGTTTGAAAGCGATGTTATATGGCATACAAGCAAAAGGCAACACAACGTCGGGAAGATAAATCCACTCATGACAAGGGACAATGCTCTTAAATTTTCAAAATGCCAGACCCAAAGATTCAGCAATTGAAAATTTGATCTATAAGAGTAAAAAATATGTACCTTCGTACGTATAAGATCAAATGCCACAGTTCATTTAAAGTTTCAGAAGGTGTTGAGTTTACTTGCCAAAACATGTGAACCTTCAAAATGGGCCGTGGATCATGTGAGGTGAATCAGATGTACCTCTTCCTACATTAAAAACTAACCTTTGTTCCATTTTTACACCATAAAATGCCCACTGCATACTAAACCATCTGTCACCAACATTTCCAACAAACTTTGCAGTCTATTTCTCCTCCTTTAGCATCTCTACCACTTCTTATATCCTTTTGGCTTTTGCATTATCAAACAGCAATGAAGAAATTCCCACTTGTGGCTCAAACTTCTCTACTTTTCTGGATTTTCTTCATCATACTAATGATTGGAAGACGTCTTGATGCATCGACTCACTGGGATCACAGTAAGAAAAATCATCATCTATGTGGTTTTTGTCAACTTATTTTGCTATTCTAGTTGCTAGGAAAATGCACTCATATCCCTAAGCCTTTTAAGTGTATGATATTTCAGTGAGCTTTAATGCAGAAGATACTCACAGACCAGTAGGCAGCTCAACGCACCACGAGGTACTGTGTTTTCTTCGTCTCCTCGCCACTTCGTATCGAACATTTTGTGAGAAAATAAATATATCTGAGACAAGAATAGGAAAAACATGAATAATAGAGGCTCAACGAACAAGACGAACCATGACAACATGCTAACAGGAAAGAACTTTAATTCAGTTTCCTTGTCATGTATGCCTGTGCAGGAAAAAACTGAAGCACTAGGTATGGAGTTATACCCGACAGGATCCAGCCTCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGCTGCAGAGTCCTGTCCCACTGTCTACAGGTGCATGTGTAAAGGGAAATATTATCACGTACCTTCCAATTGAGCATAAATTCAATCTGGAGGAGAATGCAGCAAAGAACAAAGCAATTAATGATTTGGTTAGCACTTGCACTGATGTGGTGACTATAAGGATACATTGAAGACTGAGACTATAATCTCTGTTGATTTCATTTGGGTTCATCTCCTTGTACTCGGATCATTCCGTATAAGAAAATAACTCAGAAAACAAATTTTTTCAAGCATCGGGAAGTTCAATTAGGAAGTGAGAAGTCGGTTTTTTACTAGTTTGTTCATGTCCAATATCATTTCCTTTGTTCTAGTTCTACTTGAAATGAGATCTGGTCTATCCTGCTCCCTA

mRNA sequence

ATGCCATGCCCTAAAGAAGCAATGAAGAAATTCCCACTTGTGGCTCAAACTTCTCTACTTTTCTGGATTTTCTTCATCATACTAATGATTGGAAGACGTCTTGATGCATCGACTCACTGGGATCACATGAGCTTTAATGCAGAAGATACTCACAGACCAGTAGGCAGCTCAACGCACCACGAGGAAAAAACTGAAGCACTAGGTATGGAGTTATACCCGACAGGATCCAGCCTCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGCTGCAGAGTCCTGTCCCACTGTCTACAGGTGCATGTGTAAAGGGAAATATTATCACGTACCTTCCAATTGAGCATAAATTCAATCTGGAGGAGAATGCAGCAAAGAACAAAGCAATTAATGATTTGGTTAGCACTTGCACTGATGTGGTGACTATAAGGATACATTGAAGACTGAGACTATAATCTCTGTTGATTTCATTTGGGTTCATCTCCTTGTACTCGGATCATTCCGTATAAGAAAATAACTCAGAAAACAAATTTTTTCAAGCATCGGGAAGTTCAATTAGGAAGTGAGAAGTCGGTTTTTTACTAGTTTGTTCATGTCCAATATCATTTCCTTTGTTCTAGTTCTACTTGAAATGAGATCTGGTCTATCCTGCTCCCTA

Coding sequence (CDS)

ATGCCATGCCCTAAAGAAGCAATGAAGAAATTCCCACTTGTGGCTCAAACTTCTCTACTTTTCTGGATTTTCTTCATCATACTAATGATTGGAAGACGTCTTGATGCATCGACTCACTGGGATCACATGAGCTTTAATGCAGAAGATACTCACAGACCAGTAGGCAGCTCAACGCACCACGAGGAAAAAACTGAAGCACTAGGTATGGAGTTATACCCGACAGGATCCAGCCTCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGCTGCAGAGTCCTGTCCCACTGTCTACAGGTGCATGTGTAAAGGGAAATATTATCACGTACCTTCCAATTGA

Homology

[Close]

BLAST of CmoCh15G005580 vs. Swiss-Prot
Match: EPF2_ARATH (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.8e-23
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 56  SSTHHEEKTEALG---MELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRC 115
           + THH+++    G   ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CS AESC  +YRC
Sbjct: 48  AQTHHKKEISKNGGVEMEMYPTGSSLPDCSYACGACSPCKRVMISFECSVAESCSVIYRC 107

Query: 116 MCKGKYYHVPS 124
            C+G+YYHVPS
Sbjct: 108 TCRGRYYHVPS 118

[Close]

BLAST of CmoCh15G005580 vs. Swiss-Prot
Match: EPFL7_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.1e-18
Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 1


Query: 74  TGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPS 124
           +GSS+PDCS+ACGPC PCK V++S  CSA+E+CP VY+C+CKGKYYHVPS
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSASEACPLVYKCLCKGKYYHVPS 170

[Close]

BLAST of CmoCh15G005580 vs. Swiss-Prot
Match: EPF1_ARATH (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13
Identity = 49/124 (39.52%), Postives = 60/124 (48.39%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEEKTEAL 67
           MK   L+A     F  FF   ++ R L  S+H  H                HH   T AL
Sbjct: 1   MKSLLLLA----FFLSFFFGSLLARHLPTSSHPSH----------------HHVGMTGAL 60

Query: 68  GME------LYPTGSSLPDCSHACGPCFPCKRVMVSFKCSA---AESCPTVYRCMCKGKY 123
             +      +   GS LPDCSHACG C PC+ VMVSF C++   AE+CP  Y+CMC  K 
Sbjct: 61  KRQRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKS 104

[Close]

BLAST of CmoCh15G005580 vs. TrEMBL
Match: A0A0A0KB66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052050 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.2e-49
Identity = 98/118 (83.05%), Postives = 101/118 (85.59%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEEKT-EA 67
           MK+ PLVA  SLLF IFFIILMIG  LDA T WDHMSFNAEDTHR +  S H +EKT E 
Sbjct: 1   MKRLPLVAHISLLFVIFFIILMIGSSLDA-TRWDHMSFNAEDTHRTINHSRHQQEKTKEV 60

Query: 68  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 125
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCPTVYRCMCKGKYY VPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYRVPSN 117

[Close]

BLAST of CmoCh15G005580 vs. TrEMBL
Match: B9MW47_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12090g PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-30
Identity = 71/117 (60.68%), Postives = 80/117 (68.38%), Query Frame = 1


Query: 10  KFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHH---EEKTEA 69
           KF + A  SLL  + F++ M+G+ L    H+   S++ E      G   H    E   E 
Sbjct: 2   KFLVGAHKSLLLMLIFMVFMVGKSLRPH-HYTKSSYSKEGASN--GDEAHDFPKEAAREE 61

Query: 70  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPS 124
           LGMELYPTGSSLPDCSHACGPC PCKRVMVSFKCS AESCP VYRCMCKGKYYHVPS
Sbjct: 62  LGMELYPTGSSLPDCSHACGPCTPCKRVMVSFKCSVAESCPIVYRCMCKGKYYHVPS 115

[Close]

BLAST of CmoCh15G005580 vs. TrEMBL
Match: A0A061FK47_THECC (Membrane lipoprotein OS=Theobroma cacao GN=TCM_036636 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-29
Identity = 68/118 (57.63%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEE-KTEA 67
           M    L     +L   F ++ +    L    H  H S + + T        H +E + E 
Sbjct: 1   MNSLSLRVAGQMLVLTFLMVSLATDSLRVPPHDHHASIHGKATKFGDKGQMHRQEGEKEE 60

Query: 68  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 125
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCP VYRCMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSIAESCPIVYRCMCKGKYYHVPSN 118

[Close]

BLAST of CmoCh15G005580 vs. TrEMBL
Match: M1CMS7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027541 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.1e-28
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 42  HMSFNAEDTHRPVGSSTHHEEKT----EALGMELYPTGSSLPDCSHACGPCFPCKRVMVS 101
           H S++ + T++   +  H +E+     + LGME+YPTGSSLPDCSHACGPCFPCKRVMVS
Sbjct: 31  HFSYHGKGTNKDNQNHVHLKEEKKGDHDVLGMEMYPTGSSLPDCSHACGPCFPCKRVMVS 90

Query: 102 FKCSAAESCPTVYRCMCKGKYYHVPSN 125
           F CS AESCP VYRCMCKGKYYHVPSN
Sbjct: 91  FACSIAESCPIVYRCMCKGKYYHVPSN 117

[Close]

BLAST of CmoCh15G005580 vs. TrEMBL
Match: A0A0D2TTL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G287400 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.9e-28
Identity = 60/70 (85.71%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 55  GSSTHHEEKTEALGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMC 114
           G  T    K E LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCP VYRCMC
Sbjct: 46  GDETQMNPKEE-LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSMAESCPVVYRCMC 105

Query: 115 KGKYYHVPSN 125
           KGKYYHVPSN
Sbjct: 106 KGKYYHVPSN 114

[Close]

BLAST of CmoCh15G005580 vs. TAIR10
Match: AT1G34245.1 (AT1G34245.1 Putative membrane lipoprotein)

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-24
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 56  SSTHHEEKTEALG---MELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRC 115
           + THH+++    G   ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CS AESC  +YRC
Sbjct: 48  AQTHHKKEISKNGGVEMEMYPTGSSLPDCSYACGACSPCKRVMISFECSVAESCSVIYRC 107

Query: 116 MCKGKYYHVPS 124
            C+G+YYHVPS
Sbjct: 108 TCRGRYYHVPS 118

[Close]

BLAST of CmoCh15G005580 vs. TAIR10
Match: AT1G71866.1 (AT1G71866.1 LOCATED IN: endomembrane system)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-19
Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 1


Query: 74  TGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPS 124
           +GSS+PDCS+ACGPC PCK V++S  CSA+E+CP VY+C+CKGKYYHVPS
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSASEACPLVYKCLCKGKYYHVPS 170

[Close]

BLAST of CmoCh15G005580 vs. TAIR10
Match: AT2G20875.1 (AT2G20875.1 epidermal patterning factor 1)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 49/124 (39.52%), Postives = 60/124 (48.39%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEEKTEAL 67
           MK   L+A     F  FF   ++ R L  S+H  H                HH   T AL
Sbjct: 1   MKSLLLLA----FFLSFFFGSLLARHLPTSSHPSH----------------HHVGMTGAL 60

Query: 68  GME------LYPTGSSLPDCSHACGPCFPCKRVMVSFKCSA---AESCPTVYRCMCKGKY 123
             +      +   GS LPDCSHACG C PC+ VMVSF C++   AE+CP  Y+CMC  K 
Sbjct: 61  KRQRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKS 104

[Close]

BLAST of CmoCh15G005580 vs. NCBI nr
Match: gi|659113630|ref|XP_008456675.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1-like [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-50
Identity = 100/118 (84.75%), Postives = 105/118 (88.98%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEEKT-EA 67
           MK+FPLVA  SLLF IFFIILMIGR LDA+  WDHMSFNAEDTHR V +S + +EKT E 
Sbjct: 1   MKRFPLVAHISLLFGIFFIILMIGRSLDAA-RWDHMSFNAEDTHRTVNNSRNQQEKTKEV 60

Query: 68  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 125
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCPTVYRCMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPSN 117

[Close]

BLAST of CmoCh15G005580 vs. NCBI nr
Match: gi|449446343|ref|XP_004140931.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 8.9e-49
Identity = 98/118 (83.05%), Postives = 101/118 (85.59%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEEKT-EA 67
           MK+ PLVA  SLLF IFFIILMIG  LDA T WDHMSFNAEDTHR +  S H +EKT E 
Sbjct: 1   MKRLPLVAHISLLFVIFFIILMIGSSLDA-TRWDHMSFNAEDTHRTINHSRHQQEKTKEV 60

Query: 68  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 125
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCPTVYRCMCKGKYY VPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYRVPSN 117

[Close]

BLAST of CmoCh15G005580 vs. NCBI nr
Match: gi|566200833|ref|XP_006376332.1| (hypothetical protein POPTR_0013s12090g [Populus trichocarpa])

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-30
Identity = 71/117 (60.68%), Postives = 80/117 (68.38%), Query Frame = 1


Query: 10  KFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHH---EEKTEA 69
           KF + A  SLL  + F++ M+G+ L    H+   S++ E      G   H    E   E 
Sbjct: 2   KFLVGAHKSLLLMLIFMVFMVGKSLRPH-HYTKSSYSKEGASN--GDEAHDFPKEAAREE 61

Query: 70  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPS 124
           LGMELYPTGSSLPDCSHACGPC PCKRVMVSFKCS AESCP VYRCMCKGKYYHVPS
Sbjct: 62  LGMELYPTGSSLPDCSHACGPCTPCKRVMVSFKCSVAESCPIVYRCMCKGKYYHVPS 115

[Close]

BLAST of CmoCh15G005580 vs. NCBI nr
Match: gi|731430477|ref|XP_010665052.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2 isoform X1 [Vitis vinifera])

HSP 1 Score: 135.6 bits (340), Expect = 6.0e-29
Identity = 68/114 (59.65%), Postives = 80/114 (70.18%), Query Frame = 1


Query: 13  LVAQTSLLFWIFFIILMIGRRLDASTH-WDHMSFNAEDTHRPVGSSTHHEEKTEALG-ME 72
           LV  TS L    F++L +G+ L  + H +   SF+ + TH    S  + +E  +  G M 
Sbjct: 7   LVPHTSFLLVTLFLLLTLGKGLRFTHHHYTSSSFHGKGTHNGHQSHVNPQEGEKEEGDMR 66

Query: 73  LYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 125
           +YPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCP VYRC CKGKYYHVPSN
Sbjct: 67  VYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCTCKGKYYHVPSN 120

[Close]

BLAST of CmoCh15G005580 vs. NCBI nr
Match: gi|590604351|ref|XP_007020231.1| (Membrane lipoprotein [Theobroma cacao])

HSP 1 Score: 135.6 bits (340), Expect = 6.0e-29
Identity = 68/118 (57.63%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 8   MKKFPLVAQTSLLFWIFFIILMIGRRLDASTHWDHMSFNAEDTHRPVGSSTHHEE-KTEA 67
           M    L     +L   F ++ +    L    H  H S + + T        H +E + E 
Sbjct: 1   MNSLSLRVAGQMLVLTFLMVSLATDSLRVPPHDHHASIHGKATKFGDKGQMHRQEGEKEE 60

Query: 68  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSAAESCPTVYRCMCKGKYYHVPSN 125
           LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS AESCP VYRCMCKGKYYHVPSN
Sbjct: 61  LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSIAESCPIVYRCMCKGKYYHVPSN 118

The following BLAST results are available for this feature:

BLAST of CmoCh15G005580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPF2_ARATH	3.8e-23	64.79	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=1 SV=1	[more]
EPFL7_ARATH	8.1e-18	72.00	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=1...	[more]
EPF1_ARATH	3.5e-13	39.52	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=1 SV=1	[more]

BLAST of CmoCh15G005580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB66_CUCSA	6.2e-49	83.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052050 PE=4 SV=1	[more]
B9MW47_POPTR	4.9e-30	60.68	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12090g PE=4 SV=1	[more]
A0A061FK47_THECC	4.2e-29	57.63	Membrane lipoprotein OS=Theobroma cacao GN=TCM_036636 PE=4 SV=1	[more]
M1CMS7_SOLTU	6.1e-28	67.82	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027541 PE=4 SV=1	[more]
A0A0D2TTL6_GOSRA	7.9e-28	85.71	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G287400 PE=4 SV=1	[more]

BLAST of CmoCh15G005580 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34245.1	2.1e-24	64.79	Putative membrane lipoprotein	[more]
AT1G71866.1	4.6e-19	72.00	LOCATED IN: endomembrane system	[more]
AT2G20875.1	2.0e-14	39.52	epidermal patterning factor 1	[more]

BLAST of CmoCh15G005580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113630\|ref\|XP_008456675.1\|	2.8e-50	84.75	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1-like [Cucumis melo]	[more]
gi\|449446343\|ref\|XP_004140931.1\|	8.9e-49	83.05	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus]	[more]
gi\|566200833\|ref\|XP_006376332.1\|	7.1e-30	60.68	hypothetical protein POPTR_0013s12090g [Populus trichocarpa]	[more]
gi\|731430477\|ref\|XP_010665052.1\|	6.0e-29	59.65	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2 isoform X1 [Vitis vinifera]	[more]
gi\|590604351\|ref\|XP_007020231.1\|	6.0e-29	57.63	Membrane lipoprotein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048730	epidermis morphogenesis
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:2000122	negative regulation of stomatal complex development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G005580.1	CmoCh15G005580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 13..122 score: 1.3
None	No IPR available	PANTHER	PTHR33109:SF6	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 7-RELATED	coord: 13..122 score: 1.3
None	No IPR available	PFAM	PF17181	EPF	coord: 74..121 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G005580	Cucsa.364290	Cucumber (Gy14) v1	cgycmoB0996
CmoCh15G005580	CmaCh04G024860	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G005580	Cla013659	Watermelon (97103) v1	cmowmB248
CmoCh15G005580	Csa6G052050	Cucumber (Chinese Long) v2	cmocuB297
CmoCh15G005580	MELO3C019934	Melon (DHL92) v3.5.1	cmomeB262
CmoCh15G005580	CSPI06G04310	Wild cucumber (PI 183967)	cmocpiB306
CmoCh15G005580	Lsi08G006110	Bottle gourd (USVL1VR-Ls)	cmolsiB282
CmoCh15G005580	MELO3C019934.2	Melon (DHL92) v3.6.1	cmomedB297
CmoCh15G005580	Cla97C08G151460	Watermelon (97103) v2	cmowmbB300
CmoCh15G005580	Carg01647	Silver-seed gourd	carcmoB1118

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G005580	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G005580	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G005580	Cucumber (Gy14) v2	cgybcmoB721
CmoCh15G005580	Silver-seed gourd	carcmoB0092
CmoCh15G005580	Cucumber (Chinese Long) v3	cmocucB0359
CmoCh15G005580	Wax gourd	cmowgoB0393
CmoCh15G005580	Cucurbita moschata (Rifu)	cmocmoB262
CmoCh15G005580	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G005580	Watermelon (Charleston Gray)	cmowcgB263