CmoCh14G015910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G015910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Late embryogenesis abundant protein D-29
Location	Cmo_Chr14 : 12629112 .. 12630103 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCGATTCGAGTTCGCCGTTGCCGGATTGCTCTACCGGTGGCGGTAGCGGTGGCAGCGGTGGCGTTGCTGGTTTTTACGGCGAGTTTTTGCTGGAGCGAGAACGTGGTGCACGTTCCGTCGACGGAGGAGGGTCGAGATTACCAAGAAATGAAGGTTGAGACGGCGGCGAAAGATGAAAAGGAAAAGGATCAGTCGGCGGAGACTTGGACGGAATGGGCGAAAGAGAAGATTTCCGGCGGACTTGGACTGAAAAATGAACGGCCAGAAGATGGCGTAAAGAAAGTTACTGATTTCACTTCCGGTGCCGCTGAAAAGGCGAAGGACAAAATGGGGAATGCCGCCTCAGGTTCTGTTCTTAATAAATTTATAAACAAATTTCTTCGAAATTGGAAGTTTCTAGAGAATTTTTCTGTGAATTTACTAAAAAGCTCTTTTCCTCTCCGGTAGAAGCGGGACATTGCGGTGGTGAGAAGGGCAGAGAAGTGAAGGACACGGCGGCGGAGAAGGCCGGGAATGCGAAGGACAAGGCGGCTGAAATGGCGAACACGGCGGCCGGGAAGACAACCGAAGGAGCAGAGAAGGCGAAAGAATACGCATCCAATGCAGCAAAAGCAGCGAAGGAAAAAACCGCCTCGCTGAAGAACAGAGGCGAGGAAGTCGCCGGTGAGGCGGCGGAGAAAACGAGAGAAGCGGAGGAGGCAGCGAAGAAGAAAACAGAGGAAACAACGGAGGCGGCGAAGGAGAAGGGGAAGGAGACGAAGGAGAGCGCGGAGGCGGCGGCGAGAAGAGCAGAGGAGGCGAAGGAGAAGGTGAAGAGCTGGGCGAAGGACGGGTACGAGACGGCGAAGGAGAAGATAGGGGAGCAATACGAGGCGGCGAAGGAGAAAATGGAAGAGCAATACGAGGCGGCGAAGAAGAAGTCGCAGAGGATCAAAGACGACGTGGTTTGGTCGGAGGCGGAGATCGGGCCGGACGACGAGCTGTGA

mRNA sequence

ATGCCTTCGATTCGAGTTCGCCGTTGCCGGATTGCTCTACCGGTGGCGGTAGCGGTGGCAGCGGTGGCGTTGCTGGTTTTTACGGCGAGTTTTTGCTGGAGCGAGAACGTGGTGCACGTTCCGTCGACGGAGGAGGGTCGAGATTACCAAGAAATGAAGGTTGAGACGGCGGCGAAAGATGAAAAGGAAAAGGATCAGTCGGCGGAGACTTGGACGGAATGGGCGAAAGAGAAGATTTCCGGCGGACTTGGACTGAAAAATGAACGGCCAGAAGATGGCGTAAAGAAAGTTACTGATTTCACTTCCGGTGCCGCTGAAAAGGCGAAGGACAAAATGGGGAATGCCGCCTCAGGTTCTCTCTTTTCCTCTCCGGTAGAAGCGGGACATTGCGGTGGTGAGAAGGGCAGAGAAGTGAAGGACACGGCGGCGGAGAAGGCCGGGAATGCGAAGGACAAGGCGGCTGAAATGGCGAACACGGCGGCCGGGAAGACAACCGAAGGAGCAGAGAAGGCGAAAGAATACGCATCCAATGCAGCAAAAGCAGCGAAGGAAAAAACCGCCTCGCTGAAGAACAGAGGCGAGGAAGTCGCCGGTGAGGCGGCGGAGAAAACGAGAGAAGCGGAGGAGGCAGCGAAGAAGAAAACAGAGGAAACAACGGAGGCGGCGAAGGAGAAGGGGAAGGAGACGAAGGAGAGCGCGGAGGCGGCGGCGAGAAGAGCAGAGGAGGCGAAGGAGAAGGTGAAGAGCTGGGCGAAGGACGGGTACGAGACGGCGAAGGAGAAGATAGGGGAGCAATACGAGGCGGCGAAGGAGAAAATGGAAGAGCAATACGAGGCGGCGAAGAAGAAGTCGCAGAGGATCAAAGACGACGTGGTTTGGTCGGAGGCGGAGATCGGGCCGGACGACGAGCTGTGA

Coding sequence (CDS)

ATGCCTTCGATTCGAGTTCGCCGTTGCCGGATTGCTCTACCGGTGGCGGTAGCGGTGGCAGCGGTGGCGTTGCTGGTTTTTACGGCGAGTTTTTGCTGGAGCGAGAACGTGGTGCACGTTCCGTCGACGGAGGAGGGTCGAGATTACCAAGAAATGAAGGTTGAGACGGCGGCGAAAGATGAAAAGGAAAAGGATCAGTCGGCGGAGACTTGGACGGAATGGGCGAAAGAGAAGATTTCCGGCGGACTTGGACTGAAAAATGAACGGCCAGAAGATGGCGTAAAGAAAGTTACTGATTTCACTTCCGGTGCCGCTGAAAAGGCGAAGGACAAAATGGGGAATGCCGCCTCAGGTTCTCTCTTTTCCTCTCCGGTAGAAGCGGGACATTGCGGTGGTGAGAAGGGCAGAGAAGTGAAGGACACGGCGGCGGAGAAGGCCGGGAATGCGAAGGACAAGGCGGCTGAAATGGCGAACACGGCGGCCGGGAAGACAACCGAAGGAGCAGAGAAGGCGAAAGAATACGCATCCAATGCAGCAAAAGCAGCGAAGGAAAAAACCGCCTCGCTGAAGAACAGAGGCGAGGAAGTCGCCGGTGAGGCGGCGGAGAAAACGAGAGAAGCGGAGGAGGCAGCGAAGAAGAAAACAGAGGAAACAACGGAGGCGGCGAAGGAGAAGGGGAAGGAGACGAAGGAGAGCGCGGAGGCGGCGGCGAGAAGAGCAGAGGAGGCGAAGGAGAAGGTGAAGAGCTGGGCGAAGGACGGGTACGAGACGGCGAAGGAGAAGATAGGGGAGCAATACGAGGCGGCGAAGGAGAAAATGGAAGAGCAATACGAGGCGGCGAAGAAGAAGTCGCAGAGGATCAAAGACGACGTGGTTTGGTCGGAGGCGGAGATCGGGCCGGACGACGAGCTGTGA

Homology

[Close]

BLAST of CmoCh14G015910 vs. Swiss-Prot
Match: LEA29_GOSHI (Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16
Identity = 101/296 (34.12%), Postives = 143/296 (48.31%), Query Frame = 1


Query: 22  VALLVFTASFCWSENVVHVPSTEE-GRDYQEMKVETA------------AKDE------- 81
           +  LV T +      V H+PST+E  RDY ++K +T             AKDE       
Sbjct: 8   IVFLVLTVASVRCTTVDHMPSTDEDARDYSKLKTKTEEATDEHHSRTQQAKDELKSKADH 67

Query: 82  --------------------KEKDQSAETWTEWAKEKISGGLGLK-NERPEDGVKKVTDF 141
                               KE  +  E+WTEWAKEKIS GLG K ++ P+  V+K  D 
Sbjct: 68  AANEVKSNTQQAKDRASEVGKEAKEYTESWTEWAKEKISEGLGFKQDDDPKGSVEKAFDS 127

Query: 142 TSGAAEKAKDKMGNAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEM 201
            +  A K KDK+ + ASG        AG     K +++KDTA +K  +    AK K++EM
Sbjct: 128 VADTATKTKDKLQDMASG--------AGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEM 187

Query: 202 ANTAAGKTTEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAE----KTREAEEAAK 261
                 K  E A+ AKE A+ A  AAKEK   + +R  E+  EA E    K  EA+E   
Sbjct: 188 RQATTEKARELADSAKENANTAYIAAKEKVRDMADRTSEMTNEAQERGARKAEEAKEVVA 247

Query: 262 KKTEETTEAAKEKGKETKESAEAAARRAEEAKEKVKSWAKDGYETAKEKIGEQYEA 269
           +K E   E  K+K +E  ES + A  +A++  +  KS A++  E+AK+ I   YE+
Sbjct: 248 EKAEGAAEETKKKNEERGESLKWAKEKAKQGYDAAKSKAEETIESAKDTIASGYES 295

[Close]

BLAST of CmoCh14G015910 vs. TrEMBL
Match: A0A0A0LAV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171190 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.6e-69
Identity = 193/321 (60.12%), Postives = 214/321 (66.67%), Query Frame = 1


Query: 3   SIRVRRCRIALPVAVAVAAVALLVFTASFCWSENVVHVPST-EEGRDYQEMKVETAAKDE 62
           SIRV R RI+LP       V LLVF  S CWS +V H+PST EE RDYQEMK +      
Sbjct: 8   SIRVYRRRISLPAVAMAVTVVLLVFMVSICWSGSVGHMPSTTEEARDYQEMKSKA----- 67

Query: 63  KEKDQSAETWTEWAKEKISGGLGLKNERPED---GVKKVTDFTSGAAEKAKDKMGNAASG 122
           +EKDQ+ ETWTEWAKEKI+GGLGLK+ER ED   GVKKVTDFTS +A+KAKDK+ N ASG
Sbjct: 68  EEKDQTGETWTEWAKEKITGGLGLKSERQEDDEGGVKKVTDFTSDSAKKAKDKIQNVASG 127

Query: 123 SLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAGKTTEGAEKAKEYASNA 182
                    G  G EK  EVK  AAEKAG AKDKAA++  T A KTTE A+KAKE A NA
Sbjct: 128 --------VGQYGAEKAEEVKGMAAEKAGEAKDKAAKLG-TVAEKTTEAADKAKEKAQNA 187

Query: 183 AKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKE-------------- 242
           AK  KEK  SLKN+ EE +GEA EKT+EA   A+KKTEET E AKE              
Sbjct: 188 AKGTKEKVTSLKNKAEESSGEATEKTKEAANEARKKTEETAEEAKERASTGAREAEERAG 247

Query: 243 --------KGKETKESAEAAARRAEEAKEKVKSWAKDGYETAKEKIGEQYEAAKEKMEEQ 298
                   KGKE KE AE  A RAEE  EK K WAK+G+E AKEK  E  EAAKEK+ EQ
Sbjct: 248 EMKEKAKVKGKEAKERAEEEAGRAEEIAEKGKRWAKEGFEAAKEKAEEVVEAAKEKIGEQ 307

[Close]

BLAST of CmoCh14G015910 vs. TrEMBL
Match: E5GC45_CUCME (Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.6e-56
Identity = 191/354 (53.95%), Postives = 212/354 (59.89%), Query Frame = 1


Query: 3   SIRVRRCRIALP-VAVAVAAVALLVFTASFCWSENVVHVPSTEE-GRDYQEMKVETAAKD 62
           SIRV R RI+LP VA+AV AV LLVF  + CWS +V H+PSTEE  RDY EMK + AAKD
Sbjct: 5   SIRVYRRRISLPAVAMAVTAV-LLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKD 64

Query: 63  EK-EKDQSAETWTEWAKEKISGGLGLKNERPED-----GVKKVTDFTSGAAEKAKDKMGN 122
           +K EKDQ+AETWTEWAKEKI+GGLGLKNER ED     GVKKVTDFTS +A KAKDK+ N
Sbjct: 65  DKKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQN 124

Query: 123 AASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAGKTTEGAEKAKEY 182
            ASG         G  G EK  EVK  AAEKAG AKDKAA++      KTTE AEKAKE 
Sbjct: 125 VASG--------VGQYGTEKAEEVKGMAAEKAGEAKDKAAKVGT----KTTEAAEKAKEK 184

Query: 183 ASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKE---------- 242
           A NAAK  K+K  SLKN+  E +GEA EK +E    AKKKTEET E AKE          
Sbjct: 185 AYNAAKETKDKVTSLKNKAVETSGEATEKAKEVGNEAKKKTEETAEEAKERASTGAKEVE 244

Query: 243 ------------KGKETKESAEAAAR----RAEEAKEKVKSWAKDGYETAKEKIGEQYEA 298
                       K KE KE A   A+    RA E KEK K   K+  E A+E+ G   E 
Sbjct: 245 ERAGEMKEKAKVKEKEAKERASTGAKEVEERAGEMKEKAKVKEKEAKERAEEEAGRAEEV 304

[Close]

BLAST of CmoCh14G015910 vs. TrEMBL
Match: A0A061EQH6_THECC (Late embryogenesis abundant protein D-29, putative OS=Theobroma cacao GN=TCM_021499 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-24
Identity = 121/310 (39.03%), Postives = 167/310 (53.87%), Query Frame = 1


Query: 23  ALLVFTASFCWSENVVHVPSTEEGR-DYQEMKVET------------------------- 82
           A+LV TA+     +V H+PSTEE   DY ++K +T                         
Sbjct: 37  AVLVLTAASVSCTSVDHMPSTEEEEIDYAKLKSKTQQAKNEMQSKTQQAANEVKGKTQQA 96

Query: 83  ---AAKDEKEKDQSAETWTEWAKEKISGGLGLKNERPEDGVKKVTDFTSGAAEKAKDKMG 142
              A++ EKE  +S E+WTEWAKE+IS GLG K +  +D     +D   G A KAK+K  
Sbjct: 97  KEKASEMEKEAKESTESWTEWAKERISEGLGFKQDHTKD-----SDSLPGTATKAKEKAQ 156

Query: 143 NAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEMANTAAGKTTEGAE 202
             ASG        AG   G+K R++K+TA++KAG+    AK+K  E  N A  K  E   
Sbjct: 157 EVASG--------AGEYIGDKARDMKNTASKKAGDVTNAAKEKTTETENAAVEKAGELTN 216

Query: 203 KAKEYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKGK-- 262
            AKE A  A+ AA+E T S K++  E+AG   E T E ++ A +K EE   AA EK K  
Sbjct: 217 AAKEKADTASNAAREATTSAKDKVSEMAGTTREMTNEDKDRAAQKGEEARVAAAEKAKKK 276

Query: 263 --ETKESAEAAARRAEE----AKEKVKSWAKDGYETAKEKIGEQYEAAKEKMEEQYEAAK 292
             ET+E+   A  +A+E    AK K K  AK+GY+TAK K  E  ++AK+ +   Y AAK
Sbjct: 277 KAETEENLSWAKEKAKEGYDAAKSKAKEKAKEGYDTAKSKAEEASKSAKDTIASSYVAAK 333

[Close]

BLAST of CmoCh14G015910 vs. TrEMBL
Match: A0A0D2SC73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072700 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.4e-23
Identity = 119/324 (36.73%), Postives = 165/324 (50.93%), Query Frame = 1


Query: 22  VALLVFTASFCWSENVVHVPSTEE-GRDYQEMKVETA------------AKDE------- 81
           +  LV TA+      V H+PST+E  RDY ++K +T             AKDE       
Sbjct: 8   IVFLVLTAASVRCTTVDHMPSTDEDARDYSKLKTKTEEATDEHHSRTQQAKDELKSKADH 67

Query: 82  --------------------KEKDQSAETWTEWAKEKISGGLGLK-NERPEDGVKKVTDF 141
                               KE  +  E+WTEWAKEKIS GLG K ++ P+  V+K +D 
Sbjct: 68  AANEVKSNTQQAKDRASEVEKEAKEYTESWTEWAKEKISEGLGFKQDDDPKGSVEKASDS 127

Query: 142 TSGAAEKAKDKMGNAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEM 201
            +  A K KDK+ + ASG        AG     K +++KDTA +K  +    AK K++EM
Sbjct: 128 VADTATKTKDKLQDMASG--------AGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEM 187

Query: 202 ANTAAGKTTEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAE----KTREAEEAAK 261
                 K  E A+ AKE A+ A  AAKEK   + +R  E+  EA E    K  EA+E A 
Sbjct: 188 RQATTEKARELADSAKENANTAYIAAKEKVRDMADRTSEMTNEAQERAARKAEEAKEVAA 247

Query: 262 KKTEETTEAAKEKGKETKESAEAAARRAEEA----KEKVKSWAKDGYETAKEKIGEQYEA 293
           +K +   E  K+K +ET ES + A  +A++      EK K  AK GY+ AK K GE  E+
Sbjct: 248 EKAKGAAEETKKKNEETGESLKWAKEKAKQGYDATTEKAKETAKQGYDAAKSKAGETIES 307

[Close]

BLAST of CmoCh14G015910 vs. TrEMBL
Match: M5XEI7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008651mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-22
Identity = 120/322 (37.27%), Postives = 166/322 (51.55%), Query Frame = 1


Query: 14  PVAVAVAAVALLVFTASFCWSENVVHVPSTEEGRDYQEMKVET-AAKDEKEKDQSA--ET 73
           P  V      + V  A+ C    V H  S++EG   +  + +  AA+ E+E  +S+  E+
Sbjct: 6   PFKVLFVLGVVAVMLATICRGSGVDHTSSSDEGFKVKTRQPQDEAAEKEREGRESSDSES 65

Query: 74  WTEWAKEKISGGLGLKNERPEDGVKKVTDFTSGAAEKAKDKMGNAASGS---LFSSPVEA 133
           W EWAKEKISGGLGLK +  ++  KK +D     A+  KDK+ + ASG+         + 
Sbjct: 66  WAEWAKEKISGGLGLKQDDDDENNKKASDAAYDTAKNTKDKVQDTASGTGQYTTEKAKDI 125

Query: 134 GHCGGEKGREVKDTAAEKAGN----AKDKAAEMANTAAGKTTEGAEKAKEYASNAAKAAK 193
                EK REVK+ AAEKA      AK+KA E       K +E    AKE A  A KAA+
Sbjct: 126 KDTAAEKAREVKEAAAEKAFEVEKAAKEKAYEATKAVKDKASEATNAAKEKAYEATKAAE 185

Query: 194 EKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKGKETKESAEAAARRAEEA 253
           ++T   KN  EE A +AAEK  EA++   +  EE    A EK +ETKE+ E A ++AEE 
Sbjct: 186 DETYETKNAAEETASKAAEKANEAKQKVGQTAEEIKNKAYEKAEETKEAKEKAKQKAEEV 245

Query: 254 KEKVKSWAKDGYET----------AKEKIGEQYEAAKEKMEE-----------QYEAAKK 305
            ++    A++  E           A  K  E YEAAK+K EE            +EAAK+
Sbjct: 246 NKEAYEEAEETKEAKPKTEEVKNKAAHKAKEGYEAAKKKAEETVKSTKDTVASNFEAAKQ 305

[Close]

BLAST of CmoCh14G015910 vs. TAIR10
Match: AT3G17520.1 (AT3G17520.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-08
Identity = 73/226 (32.30%), Postives = 107/226 (47.35%), Query Frame = 1


Query: 44  EEGRDYQEMKVETAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERPE---DGVKKVTDF 103
           E+ ++  + K E A    KEK  SA    E AK K+  GL    ++     D   +V D 
Sbjct: 77  EDAKEAAKRKAEEAVGAAKEKAGSAY---ETAKSKVEEGLASVKDKASQSYDSAGQVKDD 136

Query: 104 TSGAAEKAKDKMGNAASGSLFS--------------SPVEAGHCGGEKGREVKDTAAEKA 163
            S  +++ KD +    +   ++              +    G    EK +E K+ A  KA
Sbjct: 137 VSHKSKQVKDSLSGDENDESWTGWAKEKIGIKNEDINSPNLGETVSEKAKEAKEAAKRKA 196

Query: 164 GNAKDKAAEMANTAAGKTTEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAEKTRE 223
           G+AK+K AE   T           AKE AS+   AAKEK   LK   E  +  A EK +E
Sbjct: 197 GDAKEKLAETVET-----------AKEKASDMTSAAKEKAEKLKEEAERESKSAKEKIKE 256

Query: 224 AEEAAKKKTEETTEAAKEKGKETKESAEAAARRAEEAKEKVKSWAK 253
           + E AK K +ET E+AK+K     +S ++AAR++EEAK+ V   +K
Sbjct: 257 SYETAKSKADETLESAKDK---ASQSYDSAARKSEEAKDTVSHKSK 285

[Close]

BLAST of CmoCh14G015910 vs. TAIR10
Match: AT3G53040.1 (AT3G53040.1 late embryogenesis abundant protein, putative / LEA protein, putative)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 83/257 (32.30%), Postives = 120/257 (46.69%), Query Frame = 1


Query: 43  TEEGRDYQEMKVETAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERPEDGVKKVTDFTS 102
           T+E  DY   K   A   +K  D++ ET  ++A EK         +R  D  K+  ++T+
Sbjct: 109 TKETADYTADKAREAK--DKTADKTKET-ADYAAEKAREA----KDRTADKTKETAEYTA 168

Query: 103 GAAEKAKDKMGNAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAG 162
             A +AKDK  +           E      EK +E KDT AEK G  KD   + A  A  
Sbjct: 169 EKAREAKDKTADKLG--------EYKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKD 228

Query: 163 KTTEGAEKAKEYASNAAKAAKEKTA----SLKNRGEEVAGEAAEKTREAEEAAKKKTEET 222
           KT E A++  EY S+ A+  K+KTA      K+   E A E A+K REA++   +K  E 
Sbjct: 229 KTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEY 288

Query: 223 TEAAKEKGKETKESAEAAARRAEEAKEKVKSWAKDGY-------ETAKEKIGEQYEAAKE 282
            +   EK  ETK   +A   +  E K+     AK          E  K+K  E  + AKE
Sbjct: 289 RDYTAEKATETK---DAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKE 347

Query: 283 KMEEQYEAAKKKSQRIK 289
           KM+E  E A++K + ++
Sbjct: 349 KMDEAGEEARRKMEEMR 347

[Close]

BLAST of CmoCh14G015910 vs. TAIR10
Match: AT5G44310.2 (AT5G44310.2 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.9e-07
Identity = 78/265 (29.43%), Postives = 121/265 (45.66%), Query Frame = 1


Query: 54  VETAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERPEDGVKKVTDF---TSGAAEKAKD 113
           VE A     +    ++ W E + E    G G  ++  E+   K  D    T   AE+ K+
Sbjct: 54  VEKARDSRADLAYDSKKWREESGEYAEAGKGKAHKTKEEAKDKAYDMKERTKDYAEQTKN 113

Query: 114 KMGNAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAGKTTEGAEK 173
           K+   AS +             +K  E K+ A +KA + K+K  + A  A  K  EGA +
Sbjct: 114 KVNEGASRA------------ADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASR 173

Query: 174 AKEYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKGKETK 233
           A + A    + AK+K   +K + ++ A E  EK  E    A  K  +  E  K   ++TK
Sbjct: 174 AADKAYETKEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTK 233

Query: 234 ----ESAEAAARRAEEAKEKVKSWAKDGYETA-------KEKIGEQYEAAKEKMEEQYEA 293
               E A  AA +AEE K+K K +A+D  E A       KEK  +  E   + +++ +E 
Sbjct: 234 DKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDIGEKTMDTVKDVWET 293

Query: 294 AKKKSQRIKDDVVWS--EAEIGPDD 303
           AK  +Q++ + VV S  EA+   DD
Sbjct: 294 AKSTAQKVTEAVVGSGEEADKARDD 306

[Close]

BLAST of CmoCh14G015910 vs. NCBI nr
Match: gi|778679175|ref|XP_004147633.2| (PREDICTED: late embryogenesis abundant protein D-29 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 2.2e-69
Identity = 193/321 (60.12%), Postives = 214/321 (66.67%), Query Frame = 1


Query: 3   SIRVRRCRIALPVAVAVAAVALLVFTASFCWSENVVHVPST-EEGRDYQEMKVETAAKDE 62
           SIRV R RI+LP       V LLVF  S CWS +V H+PST EE RDYQEMK +      
Sbjct: 8   SIRVYRRRISLPAVAMAVTVVLLVFMVSICWSGSVGHMPSTTEEARDYQEMKSKA----- 67

Query: 63  KEKDQSAETWTEWAKEKISGGLGLKNERPED---GVKKVTDFTSGAAEKAKDKMGNAASG 122
           +EKDQ+ ETWTEWAKEKI+GGLGLK+ER ED   GVKKVTDFTS +A+KAKDK+ N ASG
Sbjct: 68  EEKDQTGETWTEWAKEKITGGLGLKSERQEDDEGGVKKVTDFTSDSAKKAKDKIQNVASG 127

Query: 123 SLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAGKTTEGAEKAKEYASNA 182
                    G  G EK  EVK  AAEKAG AKDKAA++  T A KTTE A+KAKE A NA
Sbjct: 128 --------VGQYGAEKAEEVKGMAAEKAGEAKDKAAKLG-TVAEKTTEAADKAKEKAQNA 187

Query: 183 AKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKE-------------- 242
           AK  KEK  SLKN+ EE +GEA EKT+EA   A+KKTEET E AKE              
Sbjct: 188 AKGTKEKVTSLKNKAEESSGEATEKTKEAANEARKKTEETAEEAKERASTGAREAEERAG 247

Query: 243 --------KGKETKESAEAAARRAEEAKEKVKSWAKDGYETAKEKIGEQYEAAKEKMEEQ 298
                   KGKE KE AE  A RAEE  EK K WAK+G+E AKEK  E  EAAKEK+ EQ
Sbjct: 248 EMKEKAKVKGKEAKERAEEEAGRAEEIAEKGKRWAKEGFEAAKEKAEEVVEAAKEKIGEQ 307

[Close]

BLAST of CmoCh14G015910 vs. NCBI nr
Match: gi|307136205|gb|ADN34043.1| (late embryogenesis abundant protein D-29 [Cucumis melo subsp. melo])

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 191/354 (53.95%), Postives = 212/354 (59.89%), Query Frame = 1


Query: 3   SIRVRRCRIALP-VAVAVAAVALLVFTASFCWSENVVHVPSTEE-GRDYQEMKVETAAKD 62
           SIRV R RI+LP VA+AV AV LLVF  + CWS +V H+PSTEE  RDY EMK + AAKD
Sbjct: 5   SIRVYRRRISLPAVAMAVTAV-LLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKD 64

Query: 63  EK-EKDQSAETWTEWAKEKISGGLGLKNERPED-----GVKKVTDFTSGAAEKAKDKMGN 122
           +K EKDQ+AETWTEWAKEKI+GGLGLKNER ED     GVKKVTDFTS +A KAKDK+ N
Sbjct: 65  DKKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQN 124

Query: 123 AASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAGKTTEGAEKAKEY 182
            ASG         G  G EK  EVK  AAEKAG AKDKAA++      KTTE AEKAKE 
Sbjct: 125 VASG--------VGQYGTEKAEEVKGMAAEKAGEAKDKAAKVGT----KTTEAAEKAKEK 184

Query: 183 ASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKE---------- 242
           A NAAK  K+K  SLKN+  E +GEA EK +E    AKKKTEET E AKE          
Sbjct: 185 AYNAAKETKDKVTSLKNKAVETSGEATEKAKEVGNEAKKKTEETAEEAKERASTGAKEVE 244

Query: 243 ------------KGKETKESAEAAAR----RAEEAKEKVKSWAKDGYETAKEKIGEQYEA 298
                       K KE KE A   A+    RA E KEK K   K+  E A+E+ G   E 
Sbjct: 245 ERAGEMKEKAKVKEKEAKERASTGAKEVEERAGEMKEKAKVKEKEAKERAEEEAGRAEEV 304

[Close]

BLAST of CmoCh14G015910 vs. NCBI nr
Match: gi|659077048|ref|XP_008439004.1| (PREDICTED: LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 186/353 (52.69%), Postives = 211/353 (59.77%), Query Frame = 1


Query: 3   SIRVRRCRIALP-VAVAVAAVALLVFTASFCWSENVVHVPSTEE-GRDYQEMKVETAAKD 62
           SIRV R RI+LP VA+AV AV LLVF  + CWS +V H+PSTEE  RDY EMK + AAKD
Sbjct: 5   SIRVYRRRISLPAVAMAVTAV-LLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKD 64

Query: 63  EK-EKDQSAETWTEWAKEKISGGLGLKNERPED-----GVKKVTDFTSGAAEKAKDKMGN 122
           +K EKDQ+AETWTEWAKEKI+GGLGLKNER ED     GVKKVTDFTS +A KAKDK+ N
Sbjct: 65  DKKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQN 124

Query: 123 AASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMANTAAGKTTEGAEKAKEY 182
            ASG         G  G EK  EVK  AAEKAG AKDKAA++      KTTE AEKAKE 
Sbjct: 125 VASG--------VGQYGTEKAEEVKGMAAEKAGEAKDKAAKVGT----KTTEAAEKAKEK 184

Query: 183 ASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEA------------- 242
           A NAAK  K+K  SLKN+  E +GEA EK +E    AKKK ++  EA             
Sbjct: 185 AYNAAKETKDKVTSLKNKAVETSGEATEKAKEVGNEAKKKPKKAEEAKERASTGAKEVEE 244

Query: 243 --------AKEKGKETKESAEAAAR----RAEEAKEKVKSWAKDGYETAKEKIGEQYEAA 298
                   AK K KE KE A   A+    RA E KEK K   K+  E A+E+ G   E A
Sbjct: 245 RAGEMKEKAKVKEKEAKERASTGAKEVEERAGEMKEKAKVKEKEAKERAEEEAGRAEEVA 304

[Close]

BLAST of CmoCh14G015910 vs. NCBI nr
Match: gi|590662617|ref|XP_007035997.1| (Late embryogenesis abundant protein D-29, putative [Theobroma cacao])

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24
Identity = 121/310 (39.03%), Postives = 167/310 (53.87%), Query Frame = 1


Query: 23  ALLVFTASFCWSENVVHVPSTEEGR-DYQEMKVET------------------------- 82
           A+LV TA+     +V H+PSTEE   DY ++K +T                         
Sbjct: 37  AVLVLTAASVSCTSVDHMPSTEEEEIDYAKLKSKTQQAKNEMQSKTQQAANEVKGKTQQA 96

Query: 83  ---AAKDEKEKDQSAETWTEWAKEKISGGLGLKNERPEDGVKKVTDFTSGAAEKAKDKMG 142
              A++ EKE  +S E+WTEWAKE+IS GLG K +  +D     +D   G A KAK+K  
Sbjct: 97  KEKASEMEKEAKESTESWTEWAKERISEGLGFKQDHTKD-----SDSLPGTATKAKEKAQ 156

Query: 143 NAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEMANTAAGKTTEGAE 202
             ASG        AG   G+K R++K+TA++KAG+    AK+K  E  N A  K  E   
Sbjct: 157 EVASG--------AGEYIGDKARDMKNTASKKAGDVTNAAKEKTTETENAAVEKAGELTN 216

Query: 203 KAKEYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKGK-- 262
            AKE A  A+ AA+E T S K++  E+AG   E T E ++ A +K EE   AA EK K  
Sbjct: 217 AAKEKADTASNAAREATTSAKDKVSEMAGTTREMTNEDKDRAAQKGEEARVAAAEKAKKK 276

Query: 263 --ETKESAEAAARRAEE----AKEKVKSWAKDGYETAKEKIGEQYEAAKEKMEEQYEAAK 292
             ET+E+   A  +A+E    AK K K  AK+GY+TAK K  E  ++AK+ +   Y AAK
Sbjct: 277 KAETEENLSWAKEKAKEGYDAAKSKAKEKAKEGYDTAKSKAEEASKSAKDTIASSYVAAK 333

[Close]

BLAST of CmoCh14G015910 vs. NCBI nr
Match: gi|763761596|gb|KJB28850.1| (hypothetical protein B456_005G072700 [Gossypium raimondii])

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 119/324 (36.73%), Postives = 165/324 (50.93%), Query Frame = 1


Query: 22  VALLVFTASFCWSENVVHVPSTEE-GRDYQEMKVETA------------AKDE------- 81
           +  LV TA+      V H+PST+E  RDY ++K +T             AKDE       
Sbjct: 8   IVFLVLTAASVRCTTVDHMPSTDEDARDYSKLKTKTEEATDEHHSRTQQAKDELKSKADH 67

Query: 82  --------------------KEKDQSAETWTEWAKEKISGGLGLK-NERPEDGVKKVTDF 141
                               KE  +  E+WTEWAKEKIS GLG K ++ P+  V+K +D 
Sbjct: 68  AANEVKSNTQQAKDRASEVEKEAKEYTESWTEWAKEKISEGLGFKQDDDPKGSVEKASDS 127

Query: 142 TSGAAEKAKDKMGNAASGSLFSSPVEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEM 201
            +  A K KDK+ + ASG        AG     K +++KDTA +K  +    AK K++EM
Sbjct: 128 VADTATKTKDKLQDMASG--------AGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEM 187

Query: 202 ANTAAGKTTEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAE----KTREAEEAAK 261
                 K  E A+ AKE A+ A  AAKEK   + +R  E+  EA E    K  EA+E A 
Sbjct: 188 RQATTEKARELADSAKENANTAYIAAKEKVRDMADRTSEMTNEAQERAARKAEEAKEVAA 247

Query: 262 KKTEETTEAAKEKGKETKESAEAAARRAEEA----KEKVKSWAKDGYETAKEKIGEQYEA 293
           +K +   E  K+K +ET ES + A  +A++      EK K  AK GY+ AK K GE  E+
Sbjct: 248 EKAKGAAEETKKKNEETGESLKWAKEKAKQGYDATTEKAKETAKQGYDAAKSKAGETIES 307

The following BLAST results are available for this feature:

BLAST of CmoCh14G015910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEA29_GOSHI	1.3e-16	34.12	Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum PE=3 SV=1	[more]

BLAST of CmoCh14G015910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAV6_CUCSA	1.6e-69	60.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171190 PE=4 SV=1	[more]
E5GC45_CUCME	2.6e-56	53.95	Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A061EQH6_THECC	1.2e-24	39.03	Late embryogenesis abundant protein D-29, putative OS=Theobroma cacao GN=TCM_021...	[more]
A0A0D2SC73_GOSRA	8.4e-23	36.73	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072700 PE=4 SV=1	[more]
M5XEI7_PRUPE	4.2e-22	37.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008651mg PE=4 SV=1	[more]

BLAST of CmoCh14G015910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17520.1	8.9e-08	32.30	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G53040.1	1.2e-07	32.30	late embryogenesis abundant protein, putative / LEA protein, putativ...	[more]
AT5G44310.2	9.9e-07	29.43	Late embryogenesis abundant protein (LEA) family protein	[more]

BLAST of CmoCh14G015910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679175\|ref\|XP_004147633.2\|	2.2e-69	60.12	PREDICTED: late embryogenesis abundant protein D-29 [Cucumis sativus]	[more]
gi\|307136205\|gb\|ADN34043.1\|	3.7e-56	53.95	late embryogenesis abundant protein D-29 [Cucumis melo subsp. melo]	[more]
gi\|659077048\|ref\|XP_008439004.1\|	1.2e-54	52.69	PREDICTED: LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 [Cucumi...	[more]
gi\|590662617\|ref\|XP_007035997.1\|	1.7e-24	39.03	Late embryogenesis abundant protein D-29, putative [Theobroma cacao]	[more]
gi\|763761596\|gb\|KJB28850.1\|	1.2e-22	36.73	hypothetical protein B456_005G072700 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G015910.1	CmoCh14G015910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 197..290 scor
None	No IPR available	PANTHER	PTHR23241	LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED	coord: 88..291 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G015910	Cucsa.252130	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G015910	CmaCh14G015560	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G015910	Cla021833	Watermelon (97103) v1	cmowmB231
CmoCh14G015910	Csa3G171190	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G015910	MELO3C006757	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G015910	ClCG05G006910	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G015910	CSPI03G15410	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G015910	Lsi05G013820	Bottle gourd (USVL1VR-Ls)	cmolsiB234
CmoCh14G015910	Cp4.1LG03g12040	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G015910	MELO3C006757.2	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G015910	CsaV3_3G015580	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G015910	Cla97C05G088560	Watermelon (97103) v2	cmowmbB243
CmoCh14G015910	Bhi01G000826	Wax gourd	cmowgoB0317
CmoCh14G015910	CsGy3G015470	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G015910	Carg19592	Silver-seed gourd	carcmoB0388

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G015910	CmoCh06G015860	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G015910	Melon (DHL92) v3.6.1	cmomedB225
CmoCh14G015910	Silver-seed gourd	carcmoB0096
CmoCh14G015910	Silver-seed gourd	carcmoB1006
CmoCh14G015910	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh14G015910	Cucurbita maxima (Rimu)	cmacmoB350
CmoCh14G015910	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G015910	Melon (DHL92) v3.5.1	cmomeB200
CmoCh14G015910	Cucurbita pepo (Zucchini)	cmocpeB254