CmaCh14G015560 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G015560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant protein D-29
Location	Cma_Chr14 : 11704826 .. 11706158 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCCCATGTCGCCGGAGGATAATTTTCTTCACTCTACTTGACGATTTCACTTATTTACTTTCAATCCATCAACCCAAATGCCTTCGATTCAAGTTCACCGTTGCCGGATTTCTCTACCGGTGGCGGTAGCGGTGGCGTTGCTGGTTTTTACGGTGAGTTTTTGCTGGAGCGAGAACGTGGTGCACGTGCCGTCGACGGAGGAGGCTCGAGATTACCAAGAAATGAAGGTCGAGATGGCGGCGAAAGATGAAAAGGAAAAGGATCAGTCGGCGGAGACTTGGACGGAATGGGCGAAAGAGAAGATATCCGGCGGACTTGGACTGAAAAATGAACGGCAAGAAGATGGCGTAAAGAAAGTTACTGATTTCACTTCCGGTGCCGCTGAAAAGGCCAAGGACAAAATGGGGAATGCCGCCTCAGGTTCTGTTCTTAATAAATTTTTATTTTGAAATTTTTGAACAAATTTCTTCGAAATTGGAAGTTTCTAGAGTATTTTCTGTGAATTTACTAAAAAGATATTTTCCTCTCCGATAGAAGCGGGACATTGCGGTGGTGAGAAGGGCAGAGAAGTGAAGGACACGGCGGCGGAGAAGGCCGGGAATGCCAAGGACAAGGCGGCCGAAATGGCGACCACGGCATCCGGGAAGACAACCGAAGGAGCAGAGAAGGCGAAAGAATACGCATCCAATGCAGCAAAAGCAGCGAAGGAAAAAACCGCCTCCCTGAAGAACAGAGGCGAGGAAGTCGCCGGTGAGGCGGCGGAGAAAACGAGAGAAGCGGAGGAGGCAGCGAAGAAGAAAACAGAGGAAACAACGGAGGCGGCGAAGGAGAAAGCGAAAGAGAAGGGGAAGGAGGCGAAGGAGAGCGCGGAGGCGGCGGCGGGAAGAGCAGAGGAGGCGAAGGAGAAGATGAAGAGCTGGGCGAAGGACGGGTACGAGGCGGCGAAGGAGAAGATAGGGGAGCAATACGAGGCGGCGAAGGAGAAGATGGAAGAGCAATACGAGGCAGCGAAGAAGAAGTCGCAGAGGATCAAAGACGACGTGGTTTGGTCGGAGGCGGAGATCGGGGCGGACGACGAGCTGTGAATAACTCCGGCACAGTGGCGGGAGTGTATGTTCATATTATAATGTAGAGAAGAGAGTTCCGTTTCAAGATTTCAATAAATAGTTTTTAATGGTTTATAATTATTTATTTTTGAACTTTTATTATTATTAATAATGCTTCATTTATTTAATAAATGAGACACGAAATAAATGCGAACAAAATAAAATAAAATAAAATAAAATAAAGATAAAAAAGATAAAAGCACTTTTTAGTAAGTACTTTCCCA

mRNA sequence

AATTCCCCATGTCGCCGGAGGATAATTTTCTTCACTCTACTTGACGATTTCACTTATTTACTTTCAATCCATCAACCCAAATGCCTTCGATTCAAGTTCACCGTTGCCGGATTTCTCTACCGGTGGCGGTAGCGGTGGCGTTGCTGGTTTTTACGGTGAGTTTTTGCTGGAGCGAGAACGTGGTGCACGTGCCGTCGACGGAGGAGGCTCGAGATTACCAAGAAATGAAGGTCGAGATGGCGGCGAAAGATGAAAAGGAAAAGGATCAGTCGGCGGAGACTTGGACGGAATGGGCGAAAGAGAAGATATCCGGCGGACTTGGACTGAAAAATGAACGGCAAGAAGATGGCGTAAAGAAAGTTACTGATTTCACTTCCGGTGCCGCTGAAAAGGCCAAGGACAAAATGGGGAATGCCGCCTCAGAAGCGGGACATTGCGGTGGTGAGAAGGGCAGAGAAGTGAAGGACACGGCGGCGGAGAAGGCCGGGAATGCCAAGGACAAGGCGGCCGAAATGGCGACCACGGCATCCGGGAAGACAACCGAAGGAGCAGAGAAGGCGAAAGAATACGCATCCAATGCAGCAAAAGCAGCGAAGGAAAAAACCGCCTCCCTGAAGAACAGAGGCGAGGAAGTCGCCGGTGAGGCGGCGGAGAAAACGAGAGAAGCGGAGGAGGCAGCGAAGAAGAAAACAGAGGAAACAACGGAGGCGGCGAAGGAGAAAGCGAAAGAGAAGGGGAAGGAGGCGAAGGAGAGCGCGGAGGCGGCGGCGGGAAGAGCAGAGGAGGCGAAGGAGAAGATGAAGAGCTGGGCGAAGGACGGGTACGAGGCGGCGAAGGAGAAGATAGGGGAGCAATACGAGGCGGCGAAGGAGAAGATGGAAGAGCAATACGAGGCAGCGAAGAAGAAGTCGCAGAGGATCAAAGACGACGTGGTTTGGTCGGAGGCGGAGATCGGGGCGGACGACGAGCTGTGAATAACTCCGGCACAGTGGCGGGAGTGTATGTTCATATTATAATGTAGAGAAGAGAGTTCCGTTTCAAGATTTCAATAAATAGTTTTTAATGGTTTATAATTATTTATTTTTGAACTTTTATTATTATTAATAATGCTTCATTTATTTAATAAATGAGACACGAAATAAATGCGAACAAAATAAAATAAAATAAAATAAAATAAAGATAAAAAAGATAAAAGCACTTTTTAGTAAGTACTTTCCCA

Coding sequence (CDS)

ATGCCTTCGATTCAAGTTCACCGTTGCCGGATTTCTCTACCGGTGGCGGTAGCGGTGGCGTTGCTGGTTTTTACGGTGAGTTTTTGCTGGAGCGAGAACGTGGTGCACGTGCCGTCGACGGAGGAGGCTCGAGATTACCAAGAAATGAAGGTCGAGATGGCGGCGAAAGATGAAAAGGAAAAGGATCAGTCGGCGGAGACTTGGACGGAATGGGCGAAAGAGAAGATATCCGGCGGACTTGGACTGAAAAATGAACGGCAAGAAGATGGCGTAAAGAAAGTTACTGATTTCACTTCCGGTGCCGCTGAAAAGGCCAAGGACAAAATGGGGAATGCCGCCTCAGAAGCGGGACATTGCGGTGGTGAGAAGGGCAGAGAAGTGAAGGACACGGCGGCGGAGAAGGCCGGGAATGCCAAGGACAAGGCGGCCGAAATGGCGACCACGGCATCCGGGAAGACAACCGAAGGAGCAGAGAAGGCGAAAGAATACGCATCCAATGCAGCAAAAGCAGCGAAGGAAAAAACCGCCTCCCTGAAGAACAGAGGCGAGGAAGTCGCCGGTGAGGCGGCGGAGAAAACGAGAGAAGCGGAGGAGGCAGCGAAGAAGAAAACAGAGGAAACAACGGAGGCGGCGAAGGAGAAAGCGAAAGAGAAGGGGAAGGAGGCGAAGGAGAGCGCGGAGGCGGCGGCGGGAAGAGCAGAGGAGGCGAAGGAGAAGATGAAGAGCTGGGCGAAGGACGGGTACGAGGCGGCGAAGGAGAAGATAGGGGAGCAATACGAGGCGGCGAAGGAGAAGATGGAAGAGCAATACGAGGCAGCGAAGAAGAAGTCGCAGAGGATCAAAGACGACGTGGTTTGGTCGGAGGCGGAGATCGGGGCGGACGACGAGCTGTGA

Protein sequence

MPSIQVHRCRISLPVAVAVALLVFTVSFCWSENVVHVPSTEEARDYQEMKVEMAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERQEDGVKKVTDFTSGAAEKAKDKMGNAASEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKAKEKGKEAKESAEAAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKSQRIKDDVVWSEAEIGADDEL

Homology

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BLAST of CmaCh14G015560 vs. Swiss-Prot
Match: LEA29_GOSHI (Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.7e-17
Identity = 107/302 (35.43%), Postives = 146/302 (48.34%), Query Frame = 1


Query: 19  VALLVFTVSFCWSENVVHVPSTEE-ARDYQEMKVE------------MAAKDE------- 78
           +  LV TV+      V H+PST+E ARDY ++K +              AKDE       
Sbjct: 8   IVFLVLTVASVRCTTVDHMPSTDEDARDYSKLKTKTEEATDEHHSRTQQAKDELKSKADH 67

Query: 79  --------------------KEKDQSAETWTEWAKEKISGGLGLKNERQEDG-VKKVTDF 138
                               KE  +  E+WTEWAKEKIS GLG K +    G V+K  D 
Sbjct: 68  AANEVKSNTQQAKDRASEVGKEAKEYTESWTEWAKEKISEGLGFKQDDDPKGSVEKAFDS 127

Query: 139 TSGAAEKAKDKMGNAASEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEMATTASGKT 198
            +  A K KDK+ + AS AG     K +++KDTA +K  +    AK K++EM    + K 
Sbjct: 128 VADTATKTKDKLQDMASGAGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEMRQATTEKA 187

Query: 199 TEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKE 258
            E A+ AKE A+ A  AAKEK         ++A   +E T EA+E   +K EE  E   E
Sbjct: 188 RELADSAKENANTAYIAAKEKV-------RDMADRTSEMTNEAQERGARKAEEAKEVVAE 247

Query: 259 KAKEKGKEAKESAEAAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAA 276
           KA+   +E K+  E      + AKEK    AK GY+AAK K  E  E+AK+ +   YE+ 
Sbjct: 248 KAEGAAEETKKKNEERGESLKWAKEK----AKQGYDAAKSKAEETIESAKDTIASGYESR 298

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BLAST of CmaCh14G015560 vs. TrEMBL
Match: A0A0A0LAV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171190 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.2e-75
Identity = 203/313 (64.86%), Postives = 226/313 (72.20%), Query Frame = 1


Query: 3   SIQVHRCRISLP---VAVAVALLVFTVSFCWSENVVHVPST-EEARDYQEMKVEMAAKDE 62
           SI+V+R RISLP   +AV V LLVF VS CWS +V H+PST EEARDYQEMK +      
Sbjct: 8   SIRVYRRRISLPAVAMAVTVVLLVFMVSICWSGSVGHMPSTTEEARDYQEMKSKA----- 67

Query: 63  KEKDQSAETWTEWAKEKISGGLGLKNERQED---GVKKVTDFTSGAAEKAKDKMGNAASE 122
           +EKDQ+ ETWTEWAKEKI+GGLGLK+ERQED   GVKKVTDFTS +A+KAKDK+ N AS 
Sbjct: 68  EEKDQTGETWTEWAKEKITGGLGLKSERQEDDEGGVKKVTDFTSDSAKKAKDKIQNVASG 127

Query: 123 AGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNAAKAAKEKT 182
            G  G EK  EVK  AAEKAG AKDKAA++ T A  KTTE A+KAKE A NAAK  KEK 
Sbjct: 128 VGQYGAEKAEEVKGMAAEKAGEAKDKAAKLGTVAE-KTTEAADKAKEKAQNAAKGTKEKV 187

Query: 183 ASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAK------------------EKAKE 242
            SLKN+ EE +GEA EKT+EA   A+KKTEET E AK                  EKAK 
Sbjct: 188 TSLKNKAEESSGEATEKTKEAANEARKKTEETAEEAKERASTGAREAEERAGEMKEKAKV 247

Query: 243 KGKEAKESAEAAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKS 291
           KGKEAKE AE  AGRAEE  EK K WAK+G+EAAKEK  E  EAAKEK+ EQYEAAKKKS
Sbjct: 248 KGKEAKERAEEEAGRAEEIAEKGKRWAKEGFEAAKEKAEEVVEAAKEKIGEQYEAAKKKS 307

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BLAST of CmaCh14G015560 vs. TrEMBL
Match: E5GC45_CUCME (Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-60
Identity = 191/345 (55.36%), Postives = 217/345 (62.90%), Query Frame = 1


Query: 3   SIQVHRCRISLP---VAVAVALLVFTVSFCWSENVVHVPSTEE-ARDYQEMKVEMAAKDE 62
           SI+V+R RISLP   +AV   LLVF V+ CWS +V H+PSTEE ARDY EMK ++AAKD+
Sbjct: 5   SIRVYRRRISLPAVAMAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKDD 64

Query: 63  K-EKDQSAETWTEWAKEKISGGLGLKNERQED-----GVKKVTDFTSGAAEKAKDKMGNA 122
           K EKDQ+AETWTEWAKEKI+GGLGLKNER+ED     GVKKVTDFTS +A KAKDK+ N 
Sbjct: 65  KKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQNV 124

Query: 123 ASEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNAAKAAK 182
           AS  G  G EK  EVK  AAEKAG AKDKAA++ T    KTTE AEKAKE A NAAK  K
Sbjct: 125 ASGVGQYGTEKAEEVKGMAAEKAGEAKDKAAKVGT----KTTEAAEKAKEKAYNAAKETK 184

Query: 183 EKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAA------------------KEK 242
           +K  SLKN+  E +GEA EK +E    AKKKTEET E A                  KEK
Sbjct: 185 DKVTSLKNKAVETSGEATEKAKEVGNEAKKKTEETAEEAKERASTGAKEVEERAGEMKEK 244

Query: 243 AKEKGKEAKESAEAAA----GRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKE------ 291
           AK K KEAKE A   A     RA E KEK K   K+  E A+E+ G   E A++      
Sbjct: 245 AKVKEKEAKERASTGAKEVEERAGEMKEKAKVKEKEAKERAEEEAGRAEEVAEKGKRWAK 304

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BLAST of CmaCh14G015560 vs. TrEMBL
Match: A0A061EQH6_THECC (Late embryogenesis abundant protein D-29, putative OS=Theobroma cacao GN=TCM_021499 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.4e-24
Identity = 118/307 (38.44%), Postives = 166/307 (54.07%), Query Frame = 1


Query: 15  VAVAVALLVFTVSFCWSENVVHVPSTEEAR-DYQEMKV---------------------- 74
           + +  A+LV T +     +V H+PSTEE   DY ++K                       
Sbjct: 32  ILLGAAVLVLTAASVSCTSVDHMPSTEEEEIDYAKLKSKTQQAKNEMQSKTQQAANEVKG 91

Query: 75  ------EMAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERQEDGVKKVTDFTSGAAEKA 134
                 E A++ EKE  +S E+WTEWAKE+IS GLG K +  +D     +D   G A KA
Sbjct: 92  KTQQAKEKASEMEKEAKESTESWTEWAKERISEGLGFKQDHTKD-----SDSLPGTATKA 151

Query: 135 KDKMGNAASEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEMATTASGKTTEGAEKAK 194
           K+K    AS AG   G+K R++K+TA++KAG+    AK+K  E    A  K  E    AK
Sbjct: 152 KEKAQEVASGAGEYIGDKARDMKNTASKKAGDVTNAAKEKTTETENAAVEKAGELTNAAK 211

Query: 195 EYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKAKEKGKE 254
           E A  A+ AA+E T S K++  E+AG   E T E ++ A +K EE   AA EKAK+K  E
Sbjct: 212 EKADTASNAAREATTSAKDKVSEMAGTTREMTNEDKDRAAQKGEEARVAAAEKAKKKKAE 271

Query: 255 AKESAEAAAGRAEE----AKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKS 285
            +E+   A  +A+E    AK K K  AK+GY+ AK K  E  ++AK+ +   Y AAK+KS
Sbjct: 272 TEENLSWAKEKAKEGYDAAKSKAKEKAKEGYDTAKSKAEEASKSAKDTIASSYVAAKQKS 331

[Close]

BLAST of CmaCh14G015560 vs. TrEMBL
Match: M5XEI7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008651mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.2e-23
Identity = 125/315 (39.68%), Postives = 172/315 (54.60%), Query Frame = 1


Query: 19  VALLVFTVSFCWSENVVHVPSTEEARDYQEMKVE-MAAKDEKEKDQSA--ETWTEWAKEK 78
           VA+++ T+  C    V H  S++E    +  + +  AA+ E+E  +S+  E+W EWAKEK
Sbjct: 16  VAVMLATI--CRGSGVDHTSSSDEGFKVKTRQPQDEAAEKEREGRESSDSESWAEWAKEK 75

Query: 79  ISGGLGLKNERQEDGVKKVTDFTSGAAEKAKDKMGNAASEAGHCGGEKGREVKDTAAEKA 138
           ISGGLGLK +  ++  KK +D     A+  KDK+ + AS  G    EK +++KDTAAEKA
Sbjct: 76  ISGGLGLKQDDDDENNKKASDAAYDTAKNTKDKVQDTASGTGQYTTEKAKDIKDTAAEKA 135

Query: 139 GNAKDKAAEMA---------------TTASGKTTEGAEKAKEYASNAAKAAKEKTASLKN 198
              K+ AAE A                    K +E    AKE A  A KAA+++T   KN
Sbjct: 136 REVKEAAAEKAFEVEKAAKEKAYEATKAVKDKASEATNAAKEKAYEATKAAEDETYETKN 195

Query: 199 RGEEVAGEAAEKTREAEEA-----------AKKKTEETTEAAKEKAKEK----GKEAKES 258
             EE A +AAEK  EA++            A +K EET EA KEKAK+K     KEA E 
Sbjct: 196 AAEETASKAAEKANEAKQKVGQTAEEIKNKAYEKAEETKEA-KEKAKQKAEEVNKEAYEE 255

Query: 259 AE---AAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKSQRIKD 298
           AE    A  + EE K K    AK+GYEAAK+K  E  ++ K+ +   +EAAK+ SQ+IK+
Sbjct: 256 AEETKEAKPKTEEVKNKAAHKAKEGYEAAKKKAEETVKSTKDTVASNFEAAKQTSQKIKE 315

[Close]

BLAST of CmaCh14G015560 vs. TrEMBL
Match: A0A0D2SC73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072700 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.0e-22
Identity = 117/316 (37.03%), Postives = 161/316 (50.95%), Query Frame = 1


Query: 19  VALLVFTVSFCWSENVVHVPSTEE-ARDYQEMKVE------------MAAKDE------- 78
           +  LV T +      V H+PST+E ARDY ++K +              AKDE       
Sbjct: 8   IVFLVLTAASVRCTTVDHMPSTDEDARDYSKLKTKTEEATDEHHSRTQQAKDELKSKADH 67

Query: 79  --------------------KEKDQSAETWTEWAKEKISGGLGLKNERQEDG-VKKVTDF 138
                               KE  +  E+WTEWAKEKIS GLG K +    G V+K +D 
Sbjct: 68  AANEVKSNTQQAKDRASEVEKEAKEYTESWTEWAKEKISEGLGFKQDDDPKGSVEKASDS 127

Query: 139 TSGAAEKAKDKMGNAASEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEMATTASGKT 198
            +  A K KDK+ + AS AG     K +++KDTA +K  +    AK K++EM    + K 
Sbjct: 128 VADTATKTKDKLQDMASGAGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEMRQATTEKA 187

Query: 199 TEGAEKAKEYASNAAKAAKEKTASLKNRGEEVAGEAAE----KTREAEEAAKKKTEETTE 258
            E A+ AKE A+ A  AAKEK   + +R  E+  EA E    K  EA+E A +K +   E
Sbjct: 188 RELADSAKENANTAYIAAKEKVRDMADRTSEMTNEAQERAARKAEEAKEVAAEKAKGAAE 247

Query: 259 AAKEKAKEKGKEAKESAEAAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQ 286
             K+K +E G+  K + E A    +   EK K  AK GY+AAK K GE  E+AK+ +   
Sbjct: 248 ETKKKNEETGESLKWAKEKAKQGYDATTEKAKETAKQGYDAAKSKAGETIESAKDTIASG 307

[Close]

BLAST of CmaCh14G015560 vs. TAIR10
Match: AT3G53040.1 (AT3G53040.1 late embryogenesis abundant protein, putative / LEA protein, putative)

HSP 1 Score: 55.8 bits (133), Expect = 5.1e-08
Identity = 89/255 (34.90%), Postives = 122/255 (47.84%), Query Frame = 1


Query: 40  TEEARDYQEMKVEMAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERQEDGVKKVTDFTS 99
           T+E  DY   K   A   +K  D++ ET  ++A EK         +R  D  K+  ++T+
Sbjct: 109 TKETADYTADKAREAK--DKTADKTKET-ADYAAEKAREA----KDRTADKTKETAEYTA 168

Query: 100 GAAEKAKDKMGNAASEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEK 159
             A +AKDK  +   E      EK +E KDT AEK G  KD   + A  A  KT E A++
Sbjct: 169 EKAREAKDKTADKLGEYKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAEKAKE 228

Query: 160 AKEYASNAAKAAKEKTAS----LKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKA 219
             EY S+ A+  K+KTA      K+   E A E A+K REA++   +K  E  +   EKA
Sbjct: 229 TAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEYRDYTAEKA 288

Query: 220 KE-------KGKEAKESAEAAA--------GRAEEAKEKMKSWAKDGYEAAKEKIGEQYE 276
            E       K  E K+SA   A        G+ EE K+K    A +  + AKEK+ E  E
Sbjct: 289 TETKDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQK----AVETKDTAKEKMDEAGE 348

[Close]

BLAST of CmaCh14G015560 vs. TAIR10
Match: AT5G44310.2 (AT5G44310.2 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-08
Identity = 78/257 (30.35%), Postives = 122/257 (47.47%), Query Frame = 1


Query: 51  VEMAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERQEDGVKKVTDF---TSGAAEKAKD 110
           VE A     +    ++ W E + E    G G  ++ +E+   K  D    T   AE+ K+
Sbjct: 54  VEKARDSRADLAYDSKKWREESGEYAEAGKGKAHKTKEEAKDKAYDMKERTKDYAEQTKN 113

Query: 111 KMGNAASEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNA 170
           K+   AS A     +K  E K+ A +KA + K+K  + A  A  K  EGA +A + A   
Sbjct: 114 KVNEGASRAA----DKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKAYET 173

Query: 171 AKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKAKEKGKEAKESAE 230
            + AK+K   +K + ++ A E  EK  E    A  K  +  E  K  A++   +  E A 
Sbjct: 174 KEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGAS 233

Query: 231 AAAGRAEEAKEKMKSWAKDGYEAA-------KEKIGEQYEAAKEKMEEQYEAAKKKSQRI 290
            AA +AEE K+K K +A+D  E A       KEK  +  E   + +++ +E AK  +Q++
Sbjct: 234 RAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDIGEKTMDTVKDVWETAKSTAQKV 293

Query: 291 KDDVVWS--EAEIGADD 296
            + VV S  EA+   DD
Sbjct: 294 TEAVVGSGEEADKARDD 306

[Close]

BLAST of CmaCh14G015560 vs. NCBI nr
Match: gi|778679175|ref|XP_004147633.2| (PREDICTED: late embryogenesis abundant protein D-29 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 4.6e-75
Identity = 203/313 (64.86%), Postives = 226/313 (72.20%), Query Frame = 1


Query: 3   SIQVHRCRISLP---VAVAVALLVFTVSFCWSENVVHVPST-EEARDYQEMKVEMAAKDE 62
           SI+V+R RISLP   +AV V LLVF VS CWS +V H+PST EEARDYQEMK +      
Sbjct: 8   SIRVYRRRISLPAVAMAVTVVLLVFMVSICWSGSVGHMPSTTEEARDYQEMKSKA----- 67

Query: 63  KEKDQSAETWTEWAKEKISGGLGLKNERQED---GVKKVTDFTSGAAEKAKDKMGNAASE 122
           +EKDQ+ ETWTEWAKEKI+GGLGLK+ERQED   GVKKVTDFTS +A+KAKDK+ N AS 
Sbjct: 68  EEKDQTGETWTEWAKEKITGGLGLKSERQEDDEGGVKKVTDFTSDSAKKAKDKIQNVASG 127

Query: 123 AGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNAAKAAKEKT 182
            G  G EK  EVK  AAEKAG AKDKAA++ T A  KTTE A+KAKE A NAAK  KEK 
Sbjct: 128 VGQYGAEKAEEVKGMAAEKAGEAKDKAAKLGTVAE-KTTEAADKAKEKAQNAAKGTKEKV 187

Query: 183 ASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAK------------------EKAKE 242
            SLKN+ EE +GEA EKT+EA   A+KKTEET E AK                  EKAK 
Sbjct: 188 TSLKNKAEESSGEATEKTKEAANEARKKTEETAEEAKERASTGAREAEERAGEMKEKAKV 247

Query: 243 KGKEAKESAEAAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKS 291
           KGKEAKE AE  AGRAEE  EK K WAK+G+EAAKEK  E  EAAKEK+ EQYEAAKKKS
Sbjct: 248 KGKEAKERAEEEAGRAEEIAEKGKRWAKEGFEAAKEKAEEVVEAAKEKIGEQYEAAKKKS 307

[Close]

BLAST of CmaCh14G015560 vs. NCBI nr
Match: gi|659077048|ref|XP_008439004.1| (PREDICTED: LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 3.1e-63
Identity = 195/344 (56.69%), Postives = 222/344 (64.53%), Query Frame = 1


Query: 3   SIQVHRCRISLP---VAVAVALLVFTVSFCWSENVVHVPSTEE-ARDYQEMKVEMAAKDE 62
           SI+V+R RISLP   +AV   LLVF V+ CWS +V H+PSTEE ARDY EMK ++AAKD+
Sbjct: 5   SIRVYRRRISLPAVAMAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKDD 64

Query: 63  K-EKDQSAETWTEWAKEKISGGLGLKNERQED-----GVKKVTDFTSGAAEKAKDKMGNA 122
           K EKDQ+AETWTEWAKEKI+GGLGLKNER+ED     GVKKVTDFTS +A KAKDK+ N 
Sbjct: 65  KKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQNV 124

Query: 123 ASEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNAAKAAK 182
           AS  G  G EK  EVK  AAEKAG AKDKAA++ T    KTTE AEKAKE A NAAK  K
Sbjct: 125 ASGVGQYGTEKAEEVKGMAAEKAGEAKDKAAKVGT----KTTEAAEKAKEKAYNAAKETK 184

Query: 183 EKTASLKNRG-----------EEVAGEAAEKTREAEEAAK------KKTEETTEAAKEKA 242
           +K  SLKN+            +EV  EA +K ++AEEA +      K+ EE     KEKA
Sbjct: 185 DKVTSLKNKAVETSGEATEKAKEVGNEAKKKPKKAEEAKERASTGAKEVEERAGEMKEKA 244

Query: 243 KEKGKEAKE-----------------------------SAEAAAGRAEEAKEKMKSWAKD 291
           K K KEAKE                              AE  AGRAEE  EK K WAK+
Sbjct: 245 KVKEKEAKERASTGAKEVEERAGEMKEKAKVKEKEAKERAEEEAGRAEEVAEKGKRWAKE 304

[Close]

BLAST of CmaCh14G015560 vs. NCBI nr
Match: gi|307136205|gb|ADN34043.1| (late embryogenesis abundant protein D-29 [Cucumis melo subsp. melo])

HSP 1 Score: 240.7 bits (613), Expect = 3.2e-60
Identity = 191/345 (55.36%), Postives = 217/345 (62.90%), Query Frame = 1


Query: 3   SIQVHRCRISLP---VAVAVALLVFTVSFCWSENVVHVPSTEE-ARDYQEMKVEMAAKDE 62
           SI+V+R RISLP   +AV   LLVF V+ CWS +V H+PSTEE ARDY EMK ++AAKD+
Sbjct: 5   SIRVYRRRISLPAVAMAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKDD 64

Query: 63  K-EKDQSAETWTEWAKEKISGGLGLKNERQED-----GVKKVTDFTSGAAEKAKDKMGNA 122
           K EKDQ+AETWTEWAKEKI+GGLGLKNER+ED     GVKKVTDFTS +A KAKDK+ N 
Sbjct: 65  KKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQNV 124

Query: 123 ASEAGHCGGEKGREVKDTAAEKAGNAKDKAAEMATTASGKTTEGAEKAKEYASNAAKAAK 182
           AS  G  G EK  EVK  AAEKAG AKDKAA++ T    KTTE AEKAKE A NAAK  K
Sbjct: 125 ASGVGQYGTEKAEEVKGMAAEKAGEAKDKAAKVGT----KTTEAAEKAKEKAYNAAKETK 184

Query: 183 EKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAA------------------KEK 242
           +K  SLKN+  E +GEA EK +E    AKKKTEET E A                  KEK
Sbjct: 185 DKVTSLKNKAVETSGEATEKAKEVGNEAKKKTEETAEEAKERASTGAKEVEERAGEMKEK 244

Query: 243 AKEKGKEAKESAEAAA----GRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKE------ 291
           AK K KEAKE A   A     RA E KEK K   K+  E A+E+ G   E A++      
Sbjct: 245 AKVKEKEAKERASTGAKEVEERAGEMKEKAKVKEKEAKERAEEEAGRAEEVAEKGKRWAK 304

[Close]

BLAST of CmaCh14G015560 vs. NCBI nr
Match: gi|590662617|ref|XP_007035997.1| (Late embryogenesis abundant protein D-29, putative [Theobroma cacao])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 118/307 (38.44%), Postives = 166/307 (54.07%), Query Frame = 1


Query: 15  VAVAVALLVFTVSFCWSENVVHVPSTEEAR-DYQEMKV---------------------- 74
           + +  A+LV T +     +V H+PSTEE   DY ++K                       
Sbjct: 32  ILLGAAVLVLTAASVSCTSVDHMPSTEEEEIDYAKLKSKTQQAKNEMQSKTQQAANEVKG 91

Query: 75  ------EMAAKDEKEKDQSAETWTEWAKEKISGGLGLKNERQEDGVKKVTDFTSGAAEKA 134
                 E A++ EKE  +S E+WTEWAKE+IS GLG K +  +D     +D   G A KA
Sbjct: 92  KTQQAKEKASEMEKEAKESTESWTEWAKERISEGLGFKQDHTKD-----SDSLPGTATKA 151

Query: 135 KDKMGNAASEAGHCGGEKGREVKDTAAEKAGN----AKDKAAEMATTASGKTTEGAEKAK 194
           K+K    AS AG   G+K R++K+TA++KAG+    AK+K  E    A  K  E    AK
Sbjct: 152 KEKAQEVASGAGEYIGDKARDMKNTASKKAGDVTNAAKEKTTETENAAVEKAGELTNAAK 211

Query: 195 EYASNAAKAAKEKTASLKNRGEEVAGEAAEKTREAEEAAKKKTEETTEAAKEKAKEKGKE 254
           E A  A+ AA+E T S K++  E+AG   E T E ++ A +K EE   AA EKAK+K  E
Sbjct: 212 EKADTASNAAREATTSAKDKVSEMAGTTREMTNEDKDRAAQKGEEARVAAAEKAKKKKAE 271

Query: 255 AKESAEAAAGRAEE----AKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKS 285
            +E+   A  +A+E    AK K K  AK+GY+ AK K  E  ++AK+ +   Y AAK+KS
Sbjct: 272 TEENLSWAKEKAKEGYDAAKSKAKEKAKEGYDTAKSKAEEASKSAKDTIASSYVAAKQKS 331

[Close]

BLAST of CmaCh14G015560 vs. NCBI nr
Match: gi|596147489|ref|XP_007222687.1| (hypothetical protein PRUPE_ppa008651mg [Prunus persica])

HSP 1 Score: 117.9 bits (294), Expect = 3.1e-23
Identity = 125/315 (39.68%), Postives = 172/315 (54.60%), Query Frame = 1


Query: 19  VALLVFTVSFCWSENVVHVPSTEEARDYQEMKVE-MAAKDEKEKDQSA--ETWTEWAKEK 78
           VA+++ T+  C    V H  S++E    +  + +  AA+ E+E  +S+  E+W EWAKEK
Sbjct: 16  VAVMLATI--CRGSGVDHTSSSDEGFKVKTRQPQDEAAEKEREGRESSDSESWAEWAKEK 75

Query: 79  ISGGLGLKNERQEDGVKKVTDFTSGAAEKAKDKMGNAASEAGHCGGEKGREVKDTAAEKA 138
           ISGGLGLK +  ++  KK +D     A+  KDK+ + AS  G    EK +++KDTAAEKA
Sbjct: 76  ISGGLGLKQDDDDENNKKASDAAYDTAKNTKDKVQDTASGTGQYTTEKAKDIKDTAAEKA 135

Query: 139 GNAKDKAAEMA---------------TTASGKTTEGAEKAKEYASNAAKAAKEKTASLKN 198
              K+ AAE A                    K +E    AKE A  A KAA+++T   KN
Sbjct: 136 REVKEAAAEKAFEVEKAAKEKAYEATKAVKDKASEATNAAKEKAYEATKAAEDETYETKN 195

Query: 199 RGEEVAGEAAEKTREAEEA-----------AKKKTEETTEAAKEKAKEK----GKEAKES 258
             EE A +AAEK  EA++            A +K EET EA KEKAK+K     KEA E 
Sbjct: 196 AAEETASKAAEKANEAKQKVGQTAEEIKNKAYEKAEETKEA-KEKAKQKAEEVNKEAYEE 255

Query: 259 AE---AAAGRAEEAKEKMKSWAKDGYEAAKEKIGEQYEAAKEKMEEQYEAAKKKSQRIKD 298
           AE    A  + EE K K    AK+GYEAAK+K  E  ++ K+ +   +EAAK+ SQ+IK+
Sbjct: 256 AEETKEAKPKTEEVKNKAAHKAKEGYEAAKKKAEETVKSTKDTVASNFEAAKQTSQKIKE 315

The following BLAST results are available for this feature:

BLAST of CmaCh14G015560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEA29_GOSHI	5.7e-17	35.43	Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum PE=3 SV=1	[more]

BLAST of CmaCh14G015560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAV6_CUCSA	3.2e-75	64.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171190 PE=4 SV=1	[more]
E5GC45_CUCME	2.2e-60	55.36	Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A061EQH6_THECC	7.4e-24	38.44	Late embryogenesis abundant protein D-29, putative OS=Theobroma cacao GN=TCM_021...	[more]
M5XEI7_PRUPE	2.2e-23	39.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008651mg PE=4 SV=1	[more]
A0A0D2SC73_GOSRA	7.0e-22	37.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072700 PE=4 SV=1	[more]

BLAST of CmaCh14G015560 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G53040.1	5.1e-08	34.90	late embryogenesis abundant protein, putative / LEA protein, putativ...	[more]
AT5G44310.2	8.7e-08	30.35	Late embryogenesis abundant protein (LEA) family protein	[more]

BLAST of CmaCh14G015560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679175\|ref\|XP_004147633.2\|	4.6e-75	64.86	PREDICTED: late embryogenesis abundant protein D-29 [Cucumis sativus]	[more]
gi\|659077048\|ref\|XP_008439004.1\|	3.1e-63	56.69	PREDICTED: LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 [Cucumi...	[more]
gi\|307136205\|gb\|ADN34043.1\|	3.2e-60	55.36	late embryogenesis abundant protein D-29 [Cucumis melo subsp. melo]	[more]
gi\|590662617\|ref\|XP_007035997.1\|	1.1e-23	38.44	Late embryogenesis abundant protein D-29, putative [Theobroma cacao]	[more]
gi\|596147489\|ref\|XP_007222687.1\|	3.1e-23	39.68	hypothetical protein PRUPE_ppa008651mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G015560.1	CmaCh14G015560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 186..283 scor
None	No IPR available	PANTHER	PTHR23241	LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED	coord: 88..284 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G015560	Cucsa.252130	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G015560	Cla021833	Watermelon (97103) v1	cmawmB242
CmaCh14G015560	Csa3G171190	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G015560	MELO3C006757	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G015560	ClCG05G006910	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G015560	CSPI03G15410	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G015560	CmoCh06G015860	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G015560	CmoCh14G015910	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G015560	Lsi05G013820	Bottle gourd (USVL1VR-Ls)	cmalsiB246
CmaCh14G015560	Cp4.1LG03g12040	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G015560	MELO3C006757.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G015560	CsaV3_3G015580	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G015560	Cla97C05G088560	Watermelon (97103) v2	cmawmbB263
CmaCh14G015560	Bhi01G000826	Wax gourd	cmawgoB0328
CmaCh14G015560	CsGy3G015470	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G015560	Carg19592	Silver-seed gourd	carcmaB0391

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G015560	Silver-seed gourd	carcmaB1035
CmaCh14G015560	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh14G015560	Cucurbita maxima (Rimu)	cmacmaB284
CmaCh14G015560	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G015560	Melon (DHL92) v3.6.1	cmamedB244