Cla97C05G088560 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G088560
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Late embryogenesis abundant protein D-29
Location	Cla97Chr05 : 6677813 .. 6679042 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGATTCGAGTTCACCGCCGCCTGATTTCTCTACCGGCGGTGGCGGTGACGGTGGTGTTGCTGGTTTTTATGGTGAGTTTATGCTGGAGTGGGAGTGTGGGACACATGCCGTCGACGGCGGAGGAGGCTCGAGATTACCAAGAAATGAAGAGCAAGGCGACGGCGAAAGATGAGAAGGAGAAAGATCAATCGGCGGAGACGTGGACGGAATGGGCGAAAGAGAAAATCTCCGGCGGACTTGGACTGAAAAATGAACAGCAGGAAGATGGCGGCGTTAAGAAAGTTACTGATTTCACTTCTGATACCGCTGAAAAGGCCAAAGACAAAATCCAGAATGTCGCTTCAGGTTTTTTTATTATTATTATTTTTTTCACTTTAATATTATTTGAAAATAGACCATAATAGAAATTTGAAAATAGAATTTAGAATTCAGAAATTAGATTGCAATTTAAATAATTGCGAACTGCCCATTAAATATCAGTTAATAACAAATTTTTATTAATTTATTTATGATGTTTTTTACGTAAAAAAAAATGTATAATTTATGAGACAAAAATGTTACTATGGGTTGGAAGAAGTTAAATTCTTTTCCTTTTCCTGACGACAGGGGCGGGACAATACGGCGCTGAAAAGGCCAAAGAAGTGAAGGAGACGACGGCGGAGAAGGCCGGGGAGGCTAAGGATAAGGCAGCCAAAATGGCGGACTGGGCGAGAGGAACAACAGCCGAGAAGACGACCGAAGCAGCGGAGAAGGCGAAAGAACAAGCGGACAATGCAGGGAAGGCAGCCAAGGAGAAAGTGGCCTCCCTAAAAAACAAAGCCGAAGAAACCTCCAGTGAGGCAACCGAGAAAACGAGGGAAGCAGCGGAGGAGGCAAAGAAGAGAACAGAAGAAACGGCGGAGGAGGCGAAGGAGAGAGCAGCGAGAGGAGCAAAGGAGGCGAAGGAGAAAGCGGGAGAGATGAAGGAGGAGGCGAAAGTGAAGGGGAAGGAGGCGAAGAAGAGAGCGGAAGAGGAGGCGGAGAGAGAGGAGGAGGCGGCGGAGAAGCGGAAGAGCTGGGCGAAGGAAGGGTTCGATGCCGCAAAGGGGAAAGCAGAGGAGGTTGTGGAGGCGGCGAAGGAGAAGATAGGGGAGCAATATGAGGCGGCGAAGAAGAAGTCACAAAGGATTAAAGACAATGTGGTTCGGTCGGAGGCGGAGATCGGGGTGGACGACGAGCTTTGA

mRNA sequence

ATGGCTTCGATTCGAGTTCACCGCCGCCTGATTTCTCTACCGGCGGTGGCGGTGACGGTGGTGTTGCTGGTTTTTATGGTGAGTTTATGCTGGAGTGGGAGTGTGGGACACATGCCGTCGACGGCGGAGGAGGCTCGAGATTACCAAGAAATGAAGAGCAAGGCGACGGCGAAAGATGAGAAGGAGAAAGATCAATCGGCGGAGACGTGGACGGAATGGGCGAAAGAGAAAATCTCCGGCGGACTTGGACTGAAAAATGAACAGCAGGAAGATGGCGGCGTTAAGAAAGTTACTGATTTCACTTCTGATACCGCTGAAAAGGCCAAAGACAAAATCCAGAATGTCGCTTCAGGGGCGGGACAATACGGCGCTGAAAAGGCCAAAGAAGTGAAGGAGACGACGGCGGAGAAGGCCGGGGAGGCTAAGGATAAGGCAGCCAAAATGGCGGACTGGGCGAGAGGAACAACAGCCGAGAAGACGACCGAAGCAGCGGAGAAGGCGAAAGAACAAGCGGACAATGCAGGGAAGGCAGCCAAGGAGAAAGTGGCCTCCCTAAAAAACAAAGCCGAAGAAACCTCCAGTGAGGCAACCGAGAAAACGAGGGAAGCAGCGGAGGAGGCAAAGAAGAGAACAGAAGAAACGGCGGAGGAGGCGAAGGAGAGAGCAGCGAGAGGAGCAAAGGAGGCGAAGGAGAAAGCGGGAGAGATGAAGGAGGAGGCGAAAGTGAAGGGGAAGGAGGCGAAGAAGAGAGCGGAAGAGGAGGCGGAGAGAGAGGAGGAGGCGGCGGAGAAGCGGAAGAGCTGGGCGAAGGAAGGGTTCGATGCCGCAAAGGGGAAAGCAGAGGAGGTTGTGGAGGCGGCGAAGGAGAAGATAGGGGAGCAATATGAGGCGGCGAAGAAGAAGTCACAAAGGATTAAAGACAATGTGGTTCGGTCGGAGGCGGAGATCGGGGTGGACGACGAGCTTTGA

Coding sequence (CDS)

ATGGCTTCGATTCGAGTTCACCGCCGCCTGATTTCTCTACCGGCGGTGGCGGTGACGGTGGTGTTGCTGGTTTTTATGGTGAGTTTATGCTGGAGTGGGAGTGTGGGACACATGCCGTCGACGGCGGAGGAGGCTCGAGATTACCAAGAAATGAAGAGCAAGGCGACGGCGAAAGATGAGAAGGAGAAAGATCAATCGGCGGAGACGTGGACGGAATGGGCGAAAGAGAAAATCTCCGGCGGACTTGGACTGAAAAATGAACAGCAGGAAGATGGCGGCGTTAAGAAAGTTACTGATTTCACTTCTGATACCGCTGAAAAGGCCAAAGACAAAATCCAGAATGTCGCTTCAGGGGCGGGACAATACGGCGCTGAAAAGGCCAAAGAAGTGAAGGAGACGACGGCGGAGAAGGCCGGGGAGGCTAAGGATAAGGCAGCCAAAATGGCGGACTGGGCGAGAGGAACAACAGCCGAGAAGACGACCGAAGCAGCGGAGAAGGCGAAAGAACAAGCGGACAATGCAGGGAAGGCAGCCAAGGAGAAAGTGGCCTCCCTAAAAAACAAAGCCGAAGAAACCTCCAGTGAGGCAACCGAGAAAACGAGGGAAGCAGCGGAGGAGGCAAAGAAGAGAACAGAAGAAACGGCGGAGGAGGCGAAGGAGAGAGCAGCGAGAGGAGCAAAGGAGGCGAAGGAGAAAGCGGGAGAGATGAAGGAGGAGGCGAAAGTGAAGGGGAAGGAGGCGAAGAAGAGAGCGGAAGAGGAGGCGGAGAGAGAGGAGGAGGCGGCGGAGAAGCGGAAGAGCTGGGCGAAGGAAGGGTTCGATGCCGCAAAGGGGAAAGCAGAGGAGGTTGTGGAGGCGGCGAAGGAGAAGATAGGGGAGCAATATGAGGCGGCGAAGAAGAAGTCACAAAGGATTAAAGACAATGTGGTTCGGTCGGAGGCGGAGATCGGGGTGGACGACGAGCTTTGA

Protein sequence

MASIRVHRRLISLPAVAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKDEKEKDQSAETWTEWAKEKISGGLGLKNEQQEDGGVKKVTDFTSDTAEKAKDKIQNVASGAGQYGAEKAKEVKETTAEKAGEAKDKAAKMADWARGTTAEKTTEAAEKAKEQADNAGKAAKEKVASLKNKAEETSSEATEKTREAAEEAKKRTEETAEEAKERAARGAKEAKEKAGEMKEEAKVKGKEAKKRAEEEAEREEEAAEKRKSWAKEGFDAAKGKAEEVVEAAKEKIGEQYEAAKKKSQRIKDNVVRSEAEIGVDDEL

Homology

[Close]

BLAST of Cla97C05G088560 vs. NCBI nr
Match: ADN34043.1 (late embryogenesis abundant protein D-29 [Cucumis melo subsp. melo])

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 103/129 (79.84%), Postives = 114/129 (88.37%), Query Frame = 0


Query: 2   ASIRVHRRLISLPAV--AVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKD 61
           +SIRV+RR ISLPAV  AVT VLLVFMV++CWSGSVGHMPST E+ARDY EMKSK  AKD
Sbjct: 4   SSIRVYRRRISLPAVAMAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKD 63

Query: 62  E-KEKDQSAETWTEWAKEKISGGLGLKNEQQE----DGGVKKVTDFTSDTAEKAKDKIQN 121
           + KEKDQ+AETWTEWAKEKI+GGLGLKNE++E    DGGVKKVTDFTSD+A KAKDKIQN
Sbjct: 64  DKKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQN 123

Query: 122 VASGAGQYG 124
           VASG GQYG
Sbjct: 124 VASGVGQYG 132

[Close]

BLAST of Cla97C05G088560 vs. NCBI nr
Match: XP_004147633.2 (PREDICTED: late embryogenesis abundant protein D-29 [Cucumis sativus] >KGN57211.1 hypothetical protein Csa_3G171190 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-43
Identity = 103/126 (81.75%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 2   ASIRVHRRLISLPAV--AVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKD 61
           +SIRV+RR ISLPAV  AVTVVLLVFMVS+CWSGSVGHMPST EEARDYQEMKSKA    
Sbjct: 7   SSIRVYRRRISLPAVAMAVTVVLLVFMVSICWSGSVGHMPSTTEEARDYQEMKSKA---- 66

Query: 62  EKEKDQSAETWTEWAKEKISGGLGLKNEQQED--GGVKKVTDFTSDTAEKAKDKIQNVAS 121
            +EKDQ+ ETWTEWAKEKI+GGLGLK+E+QED  GGVKKVTDFTSD+A+KAKDKIQNVAS
Sbjct: 67  -EEKDQTGETWTEWAKEKITGGLGLKSERQEDDEGGVKKVTDFTSDSAKKAKDKIQNVAS 126

Query: 122 GAGQYG 124
           G GQYG
Sbjct: 127 GVGQYG 127

[Close]

BLAST of Cla97C05G088560 vs. NCBI nr
Match: XP_008439004.2 (PREDICTED: LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 5.0e-39
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 16  VAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKDE-KEKDQSAETWTEWA 75
           +AVT VLLVFMV++CWSGSVGHMPST E+ARDY EMKSK  AKD+ KEKDQ+AETWTEWA
Sbjct: 1   MAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKDDKKEKDQTAETWTEWA 60

Query: 76  KEKISGGLGLKNEQQE----DGGVKKVTDFTSDTAEKAKDKIQNVASGAGQYG 124
           KEKI+GGLGLKNE++E    DGGVKKVTDFTSD+A KAKDKIQNVASG GQYG
Sbjct: 61  KEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQNVASGVGQYG 113

[Close]

BLAST of Cla97C05G088560 vs. NCBI nr
Match: XP_022979888.1 (late embryogenesis abundant protein D-29 [Cucurbita maxima])

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 82/102 (80.39%), Postives = 87/102 (85.29%), Query Frame = 0


Query: 1   MASIRVHRRLISLPAVAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKDE 60
           M SI+VHR  ISLP VAV V LLVF VS CWS +V H+PST EEARDYQEMK +  AKDE
Sbjct: 1   MPSIQVHRCRISLP-VAVAVALLVFTVSFCWSENVVHVPST-EEARDYQEMKVEMAAKDE 60

Query: 61  KEKDQSAETWTEWAKEKISGGLGLKNEQQEDGGVKKVTDFTS 103
           KEKDQSAETWTEWAKEKISGGLGLKNE+QED GVKKVTDFTS
Sbjct: 61  KEKDQSAETWTEWAKEKISGGLGLKNERQED-GVKKVTDFTS 99

[Close]

BLAST of Cla97C05G088560 vs. NCBI nr
Match: XP_023540691.1 (late embryogenesis abundant protein D-29-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 2.1e-29
Identity = 80/123 (65.04%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 1   MASIRVHRRLISLPAVAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKDE 60
           MASIRV RR I LPAVAV   +L+FMVS C SGSVGHMPST EE RDYQEMK K  AK+E
Sbjct: 1   MASIRVRRRRIILPAVAVXXXVLIFMVSFCRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE 60

Query: 61  KEKDQSAETWTEWAKEKISGGLGLKNEQQEDGGVKKVTDFTSDTAEKAKDKIQNVASGAG 120
           KEKD+S+ETWTEWAK+KISGGLGL+NE + DG                 +KI+NVAS AG
Sbjct: 61  KEKDRSSETWTEWAKKKISGGLGLRNELRADG----------------VNKIENVASEAG 107

Query: 121 QYG 124
           QYG
Sbjct: 121 QYG 107

[Close]

BLAST of Cla97C05G088560 vs. TrEMBL
Match: tr|E5GC45|E5GC45_CUCME (Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 103/129 (79.84%), Postives = 114/129 (88.37%), Query Frame = 0


Query: 2   ASIRVHRRLISLPAV--AVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKD 61
           +SIRV+RR ISLPAV  AVT VLLVFMV++CWSGSVGHMPST E+ARDY EMKSK  AKD
Sbjct: 4   SSIRVYRRRISLPAVAMAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKD 63

Query: 62  E-KEKDQSAETWTEWAKEKISGGLGLKNEQQE----DGGVKKVTDFTSDTAEKAKDKIQN 121
           + KEKDQ+AETWTEWAKEKI+GGLGLKNE++E    DGGVKKVTDFTSD+A KAKDKIQN
Sbjct: 64  DKKEKDQTAETWTEWAKEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQN 123

Query: 122 VASGAGQYG 124
           VASG GQYG
Sbjct: 124 VASGVGQYG 132

[Close]

BLAST of Cla97C05G088560 vs. TrEMBL
Match: tr|A0A0A0LAV6|A0A0A0LAV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171190 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.2e-43
Identity = 103/126 (81.75%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 2   ASIRVHRRLISLPAV--AVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKD 61
           +SIRV+RR ISLPAV  AVTVVLLVFMVS+CWSGSVGHMPST EEARDYQEMKSKA    
Sbjct: 7   SSIRVYRRRISLPAVAMAVTVVLLVFMVSICWSGSVGHMPSTTEEARDYQEMKSKA---- 66

Query: 62  EKEKDQSAETWTEWAKEKISGGLGLKNEQQED--GGVKKVTDFTSDTAEKAKDKIQNVAS 121
            +EKDQ+ ETWTEWAKEKI+GGLGLK+E+QED  GGVKKVTDFTSD+A+KAKDKIQNVAS
Sbjct: 67  -EEKDQTGETWTEWAKEKITGGLGLKSERQEDDEGGVKKVTDFTSDSAKKAKDKIQNVAS 126

Query: 122 GAGQYG 124
           G GQYG
Sbjct: 127 GVGQYG 127

[Close]

BLAST of Cla97C05G088560 vs. TrEMBL
Match: tr|A0A1S3AYC6|A0A1S3AYC6_CUCME (LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 OS=Cucumis melo OX=3656 GN=LOC103483929 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 16  VAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKDE-KEKDQSAETWTEWA 75
           +AVT VLLVFMV++CWSGSVGHMPST E+ARDY EMKSK  AKD+ KEKDQ+AETWTEWA
Sbjct: 1   MAVTAVLLVFMVTICWSGSVGHMPSTEEDARDYHEMKSKVAAKDDKKEKDQTAETWTEWA 60

Query: 76  KEKISGGLGLKNEQQE----DGGVKKVTDFTSDTAEKAKDKIQNVASGAGQYG 124
           KEKI+GGLGLKNE++E    DGGVKKVTDFTSD+A KAKDKIQNVASG GQYG
Sbjct: 61  KEKITGGLGLKNEREEDQDDDGGVKKVTDFTSDSALKAKDKIQNVASGVGQYG 113

[Close]

BLAST of Cla97C05G088560 vs. TrEMBL
Match: tr|V7C8J3|V7C8J3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G121900g PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.6e-09
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 16  VAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEMKSKATAKDEKEKD------QSAET 75
           ++V V+ ++ +   C+  SVGHMPST EE RD++E K+K T    K  D      ++ E+
Sbjct: 6   ISVLVMAVMLLAMNCYCTSVGHMPSTKEEGRDFEEAKAKTTQTANKAMDTAKEGKEATES 65

Query: 76  WTEWAKEKISGGLGLKNEQQ-EDGGVKKVTDF 101
           WTEWAKEK++ GLG K++Q+ ++   KKV+D+
Sbjct: 66  WTEWAKEKLTEGLGFKHDQEPKESTTKKVSDY 97

[Close]

BLAST of Cla97C05G088560 vs. TrEMBL
Match: tr|A0A0E3UPY7|A0A0E3UPY7_ROSCH (Putative LEA-2 protein OS=Rosa chinensis OX=74649 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-07
Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 16  VAVTVVLLVFMVSLCWSGSVGHMPSTAEEARDYQEM-----KSKATAKDEKEKDQSAETW 75
           V + + + + + +LC    VGH+PST EE RD++E      K+K    +EK   + +E+W
Sbjct: 10  VLLVIAVAIMLANLCSGSGVGHIPSTEEEGRDFEEFNDQTGKAKVVEVEEKGGKEGSESW 69

Query: 76  TEWAKEKISGGLGLKNEQQE-DGGVKKVTDFTSDTAEKAKDKIQNVASGAGQY 123
           TEWAKEKI    GLK+++ + D  +KK     SD A+  KD     +SG GQY
Sbjct: 70  TEWAKEKI----GLKHDEHDGDSTIKK----ASDAAKNTKD----TSSGTGQY 110

The following BLAST results are available for this feature:

BLAST of Cla97C05G088560 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34043.1	2.0e-43	79.84	late embryogenesis abundant protein D-29 [Cucumis melo subsp. melo]	[more]
XP_004147633.2	3.3e-43	81.75	PREDICTED: late embryogenesis abundant protein D-29 [Cucumis sativus] >KGN57211....	[more]
XP_008439004.2	5.0e-39	80.53	PREDICTED: LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 [Cucumi...	[more]
XP_022979888.1	1.6e-29	80.39	late embryogenesis abundant protein D-29 [Cucurbita maxima]	[more]
XP_023540691.1	2.1e-29	65.04	late embryogenesis abundant protein D-29-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C05G088560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GC45\|E5GC45_CUCME	1.3e-43	79.84	Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo OX=412675 P...	[more]
tr\|A0A0A0LAV6\|A0A0A0LAV6_CUCSA	2.2e-43	81.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171190 PE=4 SV=1	[more]
tr\|A0A1S3AYC6\|A0A1S3AYC6_CUCME	3.3e-39	80.53	LOW QUALITY PROTEIN: late embryogenesis abundant protein D-29 OS=Cucumis melo OX...	[more]
tr\|V7C8J3\|V7C8J3_PHAVU	3.6e-09	42.39	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G121900g PE=4 ...	[more]
tr\|A0A0E3UPY7\|A0A0E3UPY7_ROSCH	2.0e-07	38.94	Putative LEA-2 protein OS=Rosa chinensis OX=74649 PE=2 SV=1	[more]

BLAST of Cla97C05G088560 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G088560 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G088560.1	Cla97C05G088560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 288..315
None	No IPR available	COILS	Coil	Coil	coord: 157..265
None	No IPR available	GENE3D	G3DSA:1.20.120.20		coord: 152..309 e-value: 2.4E-7 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..316
None	No IPR available	PANTHER	PTHR23241	LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED	coord: 40..309
None	No IPR available	SUPERFAMILY	SSF58113	Apolipoprotein A-I	coord: 141..309

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G088560	Cla021833	Watermelon (97103) v1	wmwmbB206
Cla97C05G088560	Csa3G171190	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G088560	MELO3C006757	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G088560	ClCG05G006910	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G088560	CSPI03G15410	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G088560	Cucsa.252130	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G088560	CmaCh14G015560	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G088560	CmoCh14G015910	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G088560	CmoCh06G015860	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G088560	Lsi05G013820	Bottle gourd (USVL1VR-Ls)	lsiwmbB334
Cla97C05G088560	CsGy3G015470	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G088560	MELO3C006757.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G088560	Carg19592	Silver-seed gourd	carwmbB0287
Cla97C05G088560	CsaV3_3G015580	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G088560	Bhi01G000826	Wax gourd	wgowmbB178

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G088560	Watermelon (97103) v2	wmbwmbB137
Cla97C05G088560	Silver-seed gourd	carwmbB0069
Cla97C05G088560	Silver-seed gourd	carwmbB0776
Cla97C05G088560	Cucurbita maxima (Rimu)	cmawmbB366
Cla97C05G088560	Cucurbita maxima (Rimu)	cmawmbB856
Cla97C05G088560	Cucurbita moschata (Rifu)	cmowmbB351
Cla97C05G088560	Bottle gourd (USVL1VR-Ls)	lsiwmbB015
Cla97C05G088560	Melon (DHL92) v3.6.1	medwmbB114
Cla97C05G088560	Melon (DHL92) v3.5.1	mewmbB123
Cla97C05G088560	Watermelon (Charleston Gray)	wcgwmbB269
Cla97C05G088560	Wax gourd	wgowmbB076