CmoCh13G010700 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G010700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Heavy metal transport/detoxification superfamily protein
Location	Cmo_Chr13 : 8886419 .. 8887491 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGAGAAGCAAAGCTAAAAAAGCCAAGAATAATGAACAACCAACGCACCACAATGCGGAATCAGGTTCCAAATATTAATAGCAATAATGTTGTTGTTAGTATTCAATGTTTTGATATTCTCTCGCCAATCAATACCATCGTTAAACCCAGATTTTGAAGTCCATCCCTTTCAAGTTTTGGGAGAAACCCATCAGTTTTTCTCTCTGTCTCTGTGTTTAAGCATCATAGGGGTTTAGATTCCAGGAGAAAGGTTCTGTTTTTTTTTTTGTCAGTGATTTAATGACTGGAAAGGCAAGTTCAATCTTACCAACTTTTTCCATTCTTCTTCTTCATTGGCAATATTGAACTGTTTTCCCTTGACAACTATGGCAGTTTTTCTGGATGGTTTTGAGGATTCACATGGACTGTAATGGATGTTACAGGAAAGTAAGAAGAGCTCTTCTCAGTATAAAAGGTGAAATCTCTCTCTTTTTATCTCTTTTTCTCTAGAGAAATTAATATGGCTGACTATTTTTTCTCTGTCTCTCTTCAATGGATTCTATTCGGTATTTTATGACATGTAAATCCTTGTCTTCTTGATAGAGTTGGAGGACCATTTGATAGAACAAAAGCAGTGCAGGGTAAGCGTTTGTGGAAAGTTTAGCCCTCAAGATATAGCAATCAAAATAAGGAAGAAGACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAATGATATCCAAGGACCCTTCATCATCAATGCCTGGAAATGCCAATCCAACTATGACCAAGCTGAAATTTGTTGTAAGCATGAAGGTAACAAAGAAGAAAAGGAAGAATTAGCTTCGTCTATAACATAAACTGTTCTTCATCTTTCATATTATTTTGCCATTTTTATGTGTCACACATGCAAATTACTTCATAAAACCATATGCATTTAGTTGTTTACAAGTCGAATAACATATAGTTGATCATGTAAGAATTAAGCAGTCCAGTGCTTATAGACGTTATTTGGAAAACTTACTATTTTATTCACAAATGAGCAATTCGTATTCATAGACAGAG

mRNA sequence

ATGAAGGGAGAAGCAAAGCTAAAAAAGCCAAGAATAATGAACAACCAACGCACCACAATGCGGAATCAGTTTTTCTGGATGGTTTTGAGGATTCACATGGACTGTAATGGATGTTACAGGAAAGTAAGAAGAGCTCTTCTCAGTATAAAAGAGTTGGAGGACCATTTGATAGAACAAAAGCAGTGCAGGGTAAGCGTTTGTGGAAAGTTTAGCCCTCAAGATATAGCAATCAAAATAAGGAAGAAGACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAATGATATCCAAGGACCCTTCATCATCAATGCCTGGAAATGCCAATCCAACTATGACCAAGCTGAAATTTGTTGTAAGCATGAAGGTAACAAAGAAGAAAAGGAAGAATTAGCTTCGTCTATAACATAAACTGTTCTTCATCTTTCATATTATTTTGCCATTTTTATGTGTCACACATGCAAATTACTTCATAAAACCATATGCATTTAGTTGTTTACAAGTCGAATAACATATAGTTGATCATGTAAGAATTAAGCAGTCCAGTGCTTATAGACGTTATTTGGAAAACTTACTATTTTATTCACAAATGAGCAATTCGTATTCATAGACAGAG

Coding sequence (CDS)

ATGAAGGGAGAAGCAAAGCTAAAAAAGCCAAGAATAATGAACAACCAACGCACCACAATGCGGAATCAGTTTTTCTGGATGGTTTTGAGGATTCACATGGACTGTAATGGATGTTACAGGAAAGTAAGAAGAGCTCTTCTCAGTATAAAAGAGTTGGAGGACCATTTGATAGAACAAAAGCAGTGCAGGGTAAGCGTTTGTGGAAAGTTTAGCCCTCAAGATATAGCAATCAAAATAAGGAAGAAGACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAATGATATCCAAGGACCCTTCATCATCAATGCCTGGAAATGCCAATCCAACTATGACCAAGCTGAAATTTGTTGTAAGCATGAAGGTAACAAAGAAGAAAAGGAAGAATTAGCTTCGTCTATAACATAA

Homology

[Close]

BLAST of CmoCh13G010700 vs. TrEMBL
Match: A0A0A0LSZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042260 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.9e-56
Identity = 107/124 (86.29%), Postives = 113/124 (91.13%), Query Frame = 1


Query: 20  MRNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKI 79
           M  +FF MVLRIHMDCNGCYRKVRRA+LSIKELE HLIEQKQCRVSVCGKFSPQDIAIKI
Sbjct: 1   MTGKFFCMVLRIHMDCNGCYRKVRRAILSIKELETHLIEQKQCRVSVCGKFSPQDIAIKI 60

Query: 80  RKKTNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQAEICCKHEGNKEEKEELA 139
           RKKTNRRVEILEIQECDTF ENN IQGP IINAWKCQSNYDQ E CCKHEG+ +E+E+LA
Sbjct: 61  RKKTNRRVEILEIQECDTFNENNGIQGPLIINAWKCQSNYDQVETCCKHEGDTKEQEDLA 120

Query: 140 SSIT 144
           S IT
Sbjct: 121 SPIT 124

[Close]

BLAST of CmoCh13G010700 vs. TrEMBL
Match: A0A061FUS4_THECC (Copper transport protein family OS=Theobroma cacao GN=TCM_012322 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.2e-29
Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 21  RNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIR 80
           R++F  MV++I++DCNGCYRKVRRALL I+EL+ HLIE+KQCRVSVCG+F PQDIAIKIR
Sbjct: 64  RDRFCCMVMKINIDCNGCYRKVRRALLDIQELDTHLIEKKQCRVSVCGRFIPQDIAIKIR 123

Query: 81  KKTNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQAEIC 126
           KKTNRRVEILEIQE +   E    +   +I++W  +SN +    C
Sbjct: 124 KKTNRRVEILEIQEFNIDNEQISHEEKALISSWNPESNQNHVATC 168

[Close]

BLAST of CmoCh13G010700 vs. TrEMBL
Match: A0A0D2RZ60_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G195000 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28
Identity = 67/108 (62.04%), Postives = 79/108 (73.15%), Query Frame = 1


Query: 20  MRNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKI 79
           M  +   MV+RI++DCNGCYRKVRRALL +KELE HLIE+KQCRVSVCG+F P+D+AIKI
Sbjct: 28  MTERICCMVMRINIDCNGCYRKVRRALLDMKELETHLIEKKQCRVSVCGRFVPRDVAIKI 87

Query: 80  RKKTNRRVEILEIQECDTFTENNDIQGPFII--NAWKCQSNYDQAEIC 126
           RKKTNRRVEILEIQE     E    + P +I  N W  +SN    E C
Sbjct: 88  RKKTNRRVEILEIQEFSINDEQTHEEKPLMITSNTWNLESNQTHIETC 135

[Close]

BLAST of CmoCh13G010700 vs. TrEMBL
Match: A0A0B0MSQ4_GOSAR (Zinc finger protein OS=Gossypium arboreum GN=F383_25478 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 27  MVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRR 86
           MV+RI++DCNGCYRKVRRALL +KELE HLIE+KQCRVSVCG+F P+D+AIKIRKKTNRR
Sbjct: 1   MVMRINIDCNGCYRKVRRALLDMKELETHLIEKKQCRVSVCGRFVPRDVAIKIRKKTNRR 60

Query: 87  VEILEIQECDTFTENNDIQGPFII--NAWKCQSNYDQAEIC 126
           VEILEIQE     E    + P +I  N W  +SN    E C
Sbjct: 61  VEILEIQEFSINDEQTHEEKPLMITSNTWNLESNQTHIETC 101

[Close]

BLAST of CmoCh13G010700 vs. TrEMBL
Match: D7SIY0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03840 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-28
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 1


Query: 23  QFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKK 82
           +F+ MV+RI++DCNGCYRKVRRALL+I+ELE HLIE KQCRV+VCG+F PQD+AIK+RKK
Sbjct: 97  KFYCMVMRINIDCNGCYRKVRRALLNIQELETHLIEMKQCRVTVCGRFIPQDVAIKLRKK 156

Query: 83  TNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQAEIC 126
           TNRRVEIL+IQE    +EN + +      +W   S+  Q E C
Sbjct: 157 TNRRVEILDIQEFSVSSENQEQKPLISSTSWNLLSSPSQFETC 199

[Close]

BLAST of CmoCh13G010700 vs. TAIR10
Match: AT3G25855.1 (AT3G25855.1 Copper transport protein family)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 32/68 (47.06%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 27 MVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRR 86
          +V+RI++DCN C RK RR ++++KE++ H+I +K+ +V +CG+F P D+A+K+++K  RR
Sbjct: 9  VVMRINLDCNACCRKARRIIINMKEVDTHMINKKERQVILCGRFRPSDVALKLQRKMKRR 68

Query: 87 VEILEIQE 95
          VEILE+++
Sbjct: 69 VEILEVED 76

[Close]

BLAST of CmoCh13G010700 vs. TAIR10
Match: AT5G63530.1 (AT5G63530.1 farnesylated protein 3)

HSP 1 Score: 51.2 bits (121), Expect = 6.1e-07
Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 1


Query: 27  MVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCG-KFSPQDIAIKIRKKTNR 86
           +VL+++M C GC RKVRR L   + +ED + + K  +V V G K  P  +  ++++KT+R
Sbjct: 75  VVLKVYMHCEGCARKVRRCLKGFEGVEDVMTDCKTGKVVVKGEKADPLKVLARVQRKTHR 134

Query: 87  RVEIL 91
           +V++L
Sbjct: 135 QVQLL 139

[Close]

BLAST of CmoCh13G010700 vs. TAIR10
Match: AT5G24580.1 (AT5G24580.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 20/63 (31.75%), Postives = 41/63 (65.08%), Query Frame = 1


Query: 28  VLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRV 87
           +L + + C GC +K+ R++L I+ +E+ +++  + +V++ G   PQ +  KI+KKT R  
Sbjct: 59  ILYVDLHCVGCAKKIERSILKIRGVEEVVMDMNENQVTIKGVLDPQAVCNKIKKKTKRMA 118

Query: 88  EIL 91
           ++L
Sbjct: 119 KVL 121

[Close]

BLAST of CmoCh13G010700 vs. TAIR10
Match: AT4G38580.1 (AT4G38580.1 farnesylated protein 6)

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 22/69 (31.88%), Postives = 40/69 (57.97%), Query Frame = 1


Query: 21 RNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIR 80
          R Q   + +++ MDC GC RKVRR++  +K +    +E K  +V+V G   P  +  ++ 
Sbjct: 22 RKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMS 81

Query: 81 KKTNRRVEI 90
           +T ++VE+
Sbjct: 82 HRTGKKVEL 90

[Close]

BLAST of CmoCh13G010700 vs. TAIR10
Match: AT4G35060.1 (AT4G35060.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 1


Query: 29 LRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVE 88
          +R+ +DC GC RKVRRAL  ++ + D  IE    +V+V G   P  +  +I  +T +R E
Sbjct: 29 VRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKRAE 88

Query: 89 I 90
          +
Sbjct: 89 L 89

[Close]

BLAST of CmoCh13G010700 vs. NCBI nr
Match: gi|778657232|ref|XP_011650508.1| (PREDICTED: uncharacterized protein LOC101212620 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55
Identity = 107/124 (86.29%), Postives = 113/124 (91.13%), Query Frame = 1


Query: 20  MRNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKI 79
           M  +FF MVLRIHMDCNGCYRKVRRA+LSIKELE HLIEQKQCRVSVCGKFSPQDIAIKI
Sbjct: 1   MTGKFFCMVLRIHMDCNGCYRKVRRAILSIKELETHLIEQKQCRVSVCGKFSPQDIAIKI 60

Query: 80  RKKTNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQAEICCKHEGNKEEKEELA 139
           RKKTNRRVEILEIQECDTF ENN IQGP IINAWKCQSNYDQ E CCKHEG+ +E+E+LA
Sbjct: 61  RKKTNRRVEILEIQECDTFNENNGIQGPLIINAWKCQSNYDQVETCCKHEGDTKEQEDLA 120

Query: 140 SSIT 144
           S IT
Sbjct: 121 SPIT 124

[Close]

BLAST of CmoCh13G010700 vs. NCBI nr
Match: gi|659066710|ref|XP_008457410.1| (PREDICTED: uncharacterized protein LOC103497018 isoform X2 [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55
Identity = 106/124 (85.48%), Postives = 113/124 (91.13%), Query Frame = 1


Query: 20  MRNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKI 79
           M  +FF MVLRIHMDCNGCYRKVRRA+LSIKELE HLIEQK CRVSVCGKFSPQDIAIKI
Sbjct: 1   MTGKFFCMVLRIHMDCNGCYRKVRRAILSIKELETHLIEQKHCRVSVCGKFSPQDIAIKI 60

Query: 80  RKKTNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQAEICCKHEGNKEEKEELA 139
           RKKTNRRVEILE+QECDTF ENNDIQGP IINAWKCQSNYDQ E CC HEG+ +E++ELA
Sbjct: 61  RKKTNRRVEILEVQECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTHEGDTKEQQELA 120

Query: 140 SSIT 144
           SSIT
Sbjct: 121 SSIT 124

[Close]

BLAST of CmoCh13G010700 vs. NCBI nr
Match: gi|659066708|ref|XP_008457333.1| (PREDICTED: uncharacterized protein LOC103497018 isoform X1 [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-33
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 63  RVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQA 122
           RVSVCGKFSPQDIAIKIRKKTNRRVEILE+QECDTF ENNDIQGP IINAWKCQSNYDQ 
Sbjct: 49  RVSVCGKFSPQDIAIKIRKKTNRRVEILEVQECDTFNENNDIQGPLIINAWKCQSNYDQV 108

Query: 123 EICCKHEGNKEEKEELASSIT 144
           E CC HEG+ +E++ELASSIT
Sbjct: 109 ETCCTHEGDTKEQQELASSIT 129

[Close]

BLAST of CmoCh13G010700 vs. NCBI nr
Match: gi|590664563|ref|XP_007036505.1| (Copper transport protein family [Theobroma cacao])

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 21  RNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKIR 80
           R++F  MV++I++DCNGCYRKVRRALL I+EL+ HLIE+KQCRVSVCG+F PQDIAIKIR
Sbjct: 64  RDRFCCMVMKINIDCNGCYRKVRRALLDIQELDTHLIEKKQCRVSVCGRFIPQDIAIKIR 123

Query: 81  KKTNRRVEILEIQECDTFTENNDIQGPFIINAWKCQSNYDQAEIC 126
           KKTNRRVEILEIQE +   E    +   +I++W  +SN +    C
Sbjct: 124 KKTNRRVEILEIQEFNIDNEQISHEEKALISSWNPESNQNHVATC 168

[Close]

BLAST of CmoCh13G010700 vs. NCBI nr
Match: gi|823176442|ref|XP_012486449.1| (PREDICTED: uncharacterized protein LOC105800088 isoform X1 [Gossypium raimondii])

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-28
Identity = 67/108 (62.04%), Postives = 79/108 (73.15%), Query Frame = 1


Query: 20  MRNQFFWMVLRIHMDCNGCYRKVRRALLSIKELEDHLIEQKQCRVSVCGKFSPQDIAIKI 79
           M  +   MV+RI++DCNGCYRKVRRALL +KELE HLIE+KQCRVSVCG+F P+D+AIKI
Sbjct: 28  MTERICCMVMRINIDCNGCYRKVRRALLDMKELETHLIEKKQCRVSVCGRFVPRDVAIKI 87

Query: 80  RKKTNRRVEILEIQECDTFTENNDIQGPFII--NAWKCQSNYDQAEIC 126
           RKKTNRRVEILEIQE     E    + P +I  N W  +SN    E C
Sbjct: 88  RKKTNRRVEILEIQEFSINDEQTHEEKPLMITSNTWNLESNQTHIETC 135

The following BLAST results are available for this feature:

BLAST of CmoCh13G010700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G010700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSZ0_CUCSA	7.9e-56	86.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042260 PE=4 SV=1	[more]
A0A061FUS4_THECC	8.2e-29	61.90	Copper transport protein family OS=Theobroma cacao GN=TCM_012322 PE=4 SV=1	[more]
A0A0D2RZ60_GOSRA	1.4e-28	62.04	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G195000 PE=4 SV=1	[more]
A0A0B0MSQ4_GOSAR	1.4e-28	65.35	Zinc finger protein OS=Gossypium arboreum GN=F383_25478 PE=4 SV=1	[more]
D7SIY0_VITVI	2.4e-28	61.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03840 PE=4 SV=...	[more]

BLAST of CmoCh13G010700 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25855.1	1.4e-16	47.06	Copper transport protein family	[more]
AT5G63530.1	6.1e-07	38.46	farnesylated protein 3	[more]
AT5G24580.1	1.0e-06	31.75	Heavy metal transport/detoxification superfamily protein	[more]
AT4G38580.1	1.8e-06	31.88	farnesylated protein 6	[more]
AT4G35060.1	1.8e-06	37.70	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of CmoCh13G010700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657232\|ref\|XP_011650508.1\|	1.1e-55	86.29	PREDICTED: uncharacterized protein LOC101212620 [Cucumis sativus]	[more]
gi\|659066710\|ref\|XP_008457410.1\|	1.1e-55	85.48	PREDICTED: uncharacterized protein LOC103497018 isoform X2 [Cucumis melo]	[more]
gi\|659066708\|ref\|XP_008457333.1\|	1.6e-33	86.42	PREDICTED: uncharacterized protein LOC103497018 isoform X1 [Cucumis melo]	[more]
gi\|590664563\|ref\|XP_007036505.1\|	1.2e-28	61.90	Copper transport protein family [Theobroma cacao]	[more]
gi\|823176442\|ref\|XP_012486449.1\|	2.0e-28	62.04	PREDICTED: uncharacterized protein LOC105800088 isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G010700.1	CmoCh13G010700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 27..81 score: 7.9
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 28..88 score: 6.
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 12..94 score: 4.7
None	No IPR available	PANTHER	PTHR22814:SF72	SUBFAMILY NOT NAMED	coord: 12..94 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G010700	Cucsa.113730	Cucumber (Gy14) v1	cgycmoB0262
CmoCh13G010700	CmaCh13G010300	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G010700	Csa1G042260	Cucumber (Chinese Long) v2	cmocuB202
CmoCh13G010700	ClCG04G011190	Watermelon (Charleston Gray)	cmowcgB191
CmoCh13G010700	Lsi02G001740	Bottle gourd (USVL1VR-Ls)	cmolsiB198
CmoCh13G010700	Cp4.1LG20g01180	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G010700	CsaV3_1G006560	Cucumber (Chinese Long) v3	cmocucB0234
CmoCh13G010700	Cla97C04G078060	Watermelon (97103) v2	cmowmbB216
CmoCh13G010700	Bhi08G001015	Wax gourd	cmowgoB0258
CmoCh13G010700	CsGy1G006430	Cucumber (Gy14) v2	cgybcmoB067
CmoCh13G010700	Carg04808	Silver-seed gourd	carcmoB0526

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G010700	Watermelon (97103) v2	cmowmbB220
CmoCh13G010700	Watermelon (97103) v2	cmowmbB222
CmoCh13G010700	Wax gourd	cmowgoB0232
CmoCh13G010700	Wax gourd	cmowgoB0273
CmoCh13G010700	Cucurbita moschata (Rifu)	cmocmoB052
CmoCh13G010700	Cucurbita moschata (Rifu)	cmocmoB089
CmoCh13G010700	Cucurbita moschata (Rifu)	cmocmoB171
CmoCh13G010700	Cucurbita maxima (Rimu)	cmacmoB399
CmoCh13G010700	Cucurbita maxima (Rimu)	cmacmoB082
CmoCh13G010700	Cucurbita maxima (Rimu)	cmacmoB125
CmoCh13G010700	Wild cucumber (PI 183967)	cmocpiB204
CmoCh13G010700	Wild cucumber (PI 183967)	cmocpiB209
CmoCh13G010700	Cucumber (Chinese Long) v2	cmocuB207
CmoCh13G010700	Melon (DHL92) v3.5.1	cmomeB180
CmoCh13G010700	Melon (DHL92) v3.5.1	cmomeB191
CmoCh13G010700	Watermelon (Charleston Gray)	cmowcgB195
CmoCh13G010700	Watermelon (97103) v1	cmowmB194
CmoCh13G010700	Watermelon (97103) v1	cmowmB202
CmoCh13G010700	Cucurbita pepo (Zucchini)	cmocpeB183
CmoCh13G010700	Cucurbita pepo (Zucchini)	cmocpeB196
CmoCh13G010700	Cucurbita pepo (Zucchini)	cmocpeB212
CmoCh13G010700	Bottle gourd (USVL1VR-Ls)	cmolsiB206
CmoCh13G010700	Cucumber (Gy14) v2	cgybcmoB071
CmoCh13G010700	Cucumber (Gy14) v2	cgybcmoB566
CmoCh13G010700	Melon (DHL92) v3.6.1	cmomedB195
CmoCh13G010700	Melon (DHL92) v3.6.1	cmomedB202
CmoCh13G010700	Melon (DHL92) v3.6.1	cmomedB213
CmoCh13G010700	Silver-seed gourd	carcmoB0626
CmoCh13G010700	Silver-seed gourd	carcmoB0698
CmoCh13G010700	Silver-seed gourd	carcmoB0810
CmoCh13G010700	Cucumber (Chinese Long) v3	cmocucB0238
CmoCh13G010700	Cucumber (Chinese Long) v3	cmocucB0251