CmoCh12G005870 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G005870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF3511 domain protein
Location	Cmo_Chr12 : 3612777 .. 3613956 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAGAAACATGGTAATCTGTGTTCTTGTTCATTTCTGATATTAGTTTTTAAACCTGTCTGGTTGTTGTTGGGTTGGGTCAGTTCCATTGATCATGTCTTCAGCTGATAACTCAGGCTTTCATAGCTTTCTCTTTCATTTTCCTTGCCTCTTCAAGCTCCTTGGGAGGCACAAAAGTGAAATACTTACAGAAATTTGAGTTTGTATATCTGAATAGGATAACTCTGTGAGTGAATTGAGTCCGAAAGATTGTCATTTGGGCACGTTGACTTTTGTCAACGTTCTAACCGGACGATATAGGTTGTTTAAGAAGAGAGAATCGTTGGTTTCTTTTAGTCATTTCTTTTTTCTATCGTGACAACTCTTGTTCCCTATTTTTTTACCGTTCTAGGACAGCTGCCTTTTTCAACTCCAAACTCGTATATTAGTTTCGGTCCCGGTCCGTTTTTTCAAATACTTTGAATGATTATTTGATTGAATTAGTCTTTGTTGTCATTCAGACGTGAGTGAGTTGAGTCTGATAGATTATCATTCAAACGCATTGACTTTTTGTCAACGTTCTAACTGGAGAATATAGGTTGTTTAAGAAGAGAGAATCGTTAGTTTCTTTTAGCCATTTTTCTTTTCTACCGTAACAACTCTTGTTTCCCCACCTTTTTAGCGTTCTAGGAGCGAGCTGTCTTTTTCAACTCCAACAATAGTTTTGAAACTCGGGTCCGTTTTTTCATATACTTCGAATCCGAAGGTAATTATAAAAGTTTGTGATAGAAAGGGCAACCCACCCACCATCCCTTTTTGTTGTTCCTCATTGCTCCCACGTTTTCATCTTCCTCCTCCCAAACCACAGCCAAAAAAGTCCTCCATGGATGGAAGGTCATGCATGGAGATAGAAAGCTATTATGGCCCTCCAAGGCCTCCTCCCCCTTCCTCCTATCCACAAACCCAGATTTCAGGTAAGAAAGGTAAAAGAACTTCTGGGTCTACTTCTTCTTCTTCTTGTTCTTCATCTTGTTCAACATCAAAGCCATGGAGATTTGGAGACCCTGAGTTTCAGAGGAAGAAAAGGGTTGCGAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAGGGGTCCTTCAGGAACAGCTTCAGATGGCTCAAGGGTAAGTACACCCAGATCCTTTATGGCTGGTGGTGA

mRNA sequence

ATGGAACAGAAACATGGTAATCTGTGTTCTTGTTCATTTCTGATATTAGTTTTTAAACCTGTCTGGTTGTTGTTGGGTTGGGATAACTCTTCATTTCTTTTTTCTATCGTGACAACTCTTGTTCCCTATTTTTTTACCGTTCTAGGACAGCTGCCTTTTTCAACTCCAAACTCTCTTTGTTGTCATTCAGACCGTTCTAGGAGCGAGCTGTCTTTTTCAACTCCAACAATAGTTTTGAAACTCGGGTCCGTTTTTTCATATACTTCGAATCCGAAGCCAAAAAAGTCCTCCATGGATGGAAGGTCATGCATGGAGATAGAAAGCTATTATGGCCCTCCAAGGCCTCCTCCCCCTTCCTCCTATCCACAAACCCAGATTTCAGGTAAGAAAGGTAAAAGAACTTCTGGGTCTACTTCTTCTTCTTCTTGTTCTTCATCTTGTTCAACATCAAAGCCATGGAGATTTGGAGACCCTGAGTTTCAGAGGAAGAAAAGGGTTGCGAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAGGGGTCCTTCAGGAACAGCTTCAGATGGCTCAAGGGTAAGTACACCCAGATCCTTTATGGCTGGTGGTGA

Coding sequence (CDS)

ATGGAACAGAAACATGGTAATCTGTGTTCTTGTTCATTTCTGATATTAGTTTTTAAACCTGTCTGGTTGTTGTTGGGTTGGGATAACTCTTCATTTCTTTTTTCTATCGTGACAACTCTTGTTCCCTATTTTTTTACCGTTCTAGGACAGCTGCCTTTTTCAACTCCAAACTCTCTTTGTTGTCATTCAGACCGTTCTAGGAGCGAGCTGTCTTTTTCAACTCCAACAATAGTTTTGAAACTCGGGTCCGTTTTTTCATATACTTCGAATCCGAAGCCAAAAAAGTCCTCCATGGATGGAAGGTCATGCATGGAGATAGAAAGCTATTATGGCCCTCCAAGGCCTCCTCCCCCTTCCTCCTATCCACAAACCCAGATTTCAGGTAAGAAAGGTAAAAGAACTTCTGGGTCTACTTCTTCTTCTTCTTGTTCTTCATCTTGTTCAACATCAAAGCCATGGAGATTTGGAGACCCTGAGTTTCAGAGGAAGAAAAGGGTTGCGAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAGGGGTCCTTCAGGAACAGCTTCAGATGGCTCAAGGGTAAGTACACCCAGATCCTTTATGGCTGGTGGTGA

Homology

[Close]

BLAST of CmoCh12G005870 vs. TrEMBL
Match: W9R3W8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000591 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-25
Identity = 68/119 (57.14%), Postives = 79/119 (66.39%), Query Frame = 1


Query: 95  KSSMDGRSCMEIESYYGPPRPPPPSSYPQTQISG------------KKGKRTSGSTSSSS 154
           +S   G   M+I++YYGPPR    +S+ QTQ+              KKGK  SGS+S   
Sbjct: 6   RSRSYGSGMMQIDNYYGPPRSFS-TSHTQTQMGNDINNNNIRDLKMKKGKNASGSSS--- 65

Query: 155 CSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW 202
                  SKPW FGDPEFQRKKRVASYKMYSVEGK+KGSFR SFRWLK KYTQ++YGWW
Sbjct: 66  -------SKPWSFGDPEFQRKKRVASYKMYSVEGKVKGSFRKSFRWLKDKYTQVVYGWW 113

[Close]

BLAST of CmoCh12G005870 vs. TrEMBL
Match: A0A0A0KFK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G364115 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.3e-23
Identity = 65/99 (65.66%), Postives = 70/99 (70.71%), Query Frame = 1


Query: 104 MEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSCSSSCSTSKPWRF-GDPEFQR 163
           MEIE YYGP          ++Q+S KKGK TSGS+S S           WRF  DPEFQR
Sbjct: 1   MEIEKYYGPSS--------KSQVSVKKGKSTSGSSSKS-----------WRFVADPEFQR 60

Query: 164 KKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW 202
           KKRVASYKMYSVEGKMKGSFR SFRWLK KYTQ+LYGWW
Sbjct: 61  KKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 80

[Close]

BLAST of CmoCh12G005870 vs. TrEMBL
Match: M5XFG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013495mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 68/122 (55.74%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 95  KSSMDGRSCMEIESYYGPPRPPPPS-------SYPQTQISG--------KKGKRTSGSTS 154
           KS   G   M++E+YYGPPRPP          SY QTQ++         KKGK TSGS+S
Sbjct: 8   KSYGTGSGTMQMENYYGPPRPPTSYELRSYSVSYAQTQMANNNNRDFKLKKGKSTSGSSS 67

Query: 155 SSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG 202
            S+          W   DPE QRKKRVASYKMYSVEGKMKGSFR SFRWLK K TQ++YG
Sbjct: 68  KSN----------WGLMDPELQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKCTQVVYG 119

[Close]

BLAST of CmoCh12G005870 vs. TrEMBL
Match: B9RQS2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0706040 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.3e-23
Identity = 67/125 (53.60%), Postives = 78/125 (62.40%), Query Frame = 1


Query: 100 GRSCMEIESYYGPPRPPPPS-----------SYPQTQISG------------KKGKRTSG 159
           G S M+IESY+GP  PPPP+           SY Q+Q++             K GK  SG
Sbjct: 16  GGSNMQIESYHGPQIPPPPATTSYELRSYSASYAQSQMANNNFTTNTRDFKLKTGKNASG 75

Query: 160 STSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQI 202
           S+SS S          W F DPEFQRKKRVASYKMYSVEGK+KGSFR SFRWLK +YTQ+
Sbjct: 76  SSSSKS----------WSFTDPEFQRKKRVASYKMYSVEGKVKGSFRRSFRWLKDRYTQV 130

[Close]

BLAST of CmoCh12G005870 vs. TrEMBL
Match: A0A067KP56_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07646 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.3e-23
Identity = 68/130 (52.31%), Postives = 78/130 (60.00%), Query Frame = 1


Query: 97  SMDGRSCMEIESYYGPPRPPPPSSYP---------QTQISG----------------KKG 156
           S  G + M+IESYYGPPRPP  +SY          Q+QI+                 KKG
Sbjct: 13  SHGGGNNMQIESYYGPPRPPTTTSYDLRSYSASYAQSQIANNSYTTNSFNNGRDFKLKKG 72

Query: 157 KRTSGSTSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKG 202
           K TSGS+S S           W   DPEFQRKKRVASYKMYS EGK+KGSFR SFRWLK 
Sbjct: 73  KSTSGSSSKS-----------WILNDPEFQRKKRVASYKMYSAEGKVKGSFRRSFRWLKD 131

[Close]

BLAST of CmoCh12G005870 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511))

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 1


Query: 146 SCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW 202
           S + SK W   DPE QRKKRVASYKMY VEGK+KGSFRNSFRWLK +YTQ++YGWW
Sbjct: 50  SIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGWW 105

[Close]

BLAST of CmoCh12G005870 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511))

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11
Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 97  SMDGRSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSCSSSCSTSKPWRFG 156
           S  G    ++ SY        P+  P+ Q + KKG+    S+SSSS          W F 
Sbjct: 31  SFSGNGMQDLRSY-STSYTDYPTRIPEDQ-NPKKGR----SSSSSS----------WGFV 90

Query: 157 DPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQIL 198
           DP+ QRKKRV SY+ Y+VEGK+KGSFR SF+W+K K  ++L
Sbjct: 91  DPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

[Close]

BLAST of CmoCh12G005870 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511))

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 1


Query: 110 YGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSCSSSCSTSKPWRFGDPEFQRKKRVASY 169
           + P  PPPP S  +T+                      +T+ PWR  D E +RKKR+A+Y
Sbjct: 43  FQPSIPPPPGSTSKTR----------------------TTATPWRLIDAETKRKKRIATY 102

Query: 170 KMYSVEGKMKGSFRNSFRWLKGKYTQILYG 200
           K Y++EGK+K + +  F W+K +Y+ I++G
Sbjct: 103 KTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of CmoCh12G005870 vs. TAIR10
Match: AT3G13910.1 (AT3G13910.1 Protein of unknown function (DUF3511))

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1


Query: 139 SSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLK 191
           S S  ++  + S+ W F DPE +RK+RVA YK+YSVE KMKGS R SF+W K
Sbjct: 45  SKSVPNADRAASRSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFK 96

[Close]

BLAST of CmoCh12G005870 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511))

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-08
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 1


Query: 144 SSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG 200
           SSS ST     + DPE +RK+RVA YK+YS EGKMK + R S++W+K + ++I++G
Sbjct: 68  SSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of CmoCh12G005870 vs. NCBI nr
Match: gi|703091265|ref|XP_010094301.1| (hypothetical protein L484_000591 [Morus notabilis])

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 68/119 (57.14%), Postives = 79/119 (66.39%), Query Frame = 1


Query: 95  KSSMDGRSCMEIESYYGPPRPPPPSSYPQTQISG------------KKGKRTSGSTSSSS 154
           +S   G   M+I++YYGPPR    +S+ QTQ+              KKGK  SGS+S   
Sbjct: 6   RSRSYGSGMMQIDNYYGPPRSFS-TSHTQTQMGNDINNNNIRDLKMKKGKNASGSSS--- 65

Query: 155 CSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW 202
                  SKPW FGDPEFQRKKRVASYKMYSVEGK+KGSFR SFRWLK KYTQ++YGWW
Sbjct: 66  -------SKPWSFGDPEFQRKKRVASYKMYSVEGKVKGSFRKSFRWLKDKYTQVVYGWW 113

[Close]

BLAST of CmoCh12G005870 vs. NCBI nr
Match: gi|1009134393|ref|XP_015884421.1| (PREDICTED: uncharacterized protein LOC107420071 [Ziziphus jujuba])

HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 71/123 (57.72%), Postives = 77/123 (62.60%), Query Frame = 1


Query: 95  KSSMDGRSCMEIESYYGPPRPPPPS--------SYPQTQ--------ISGKKGKRTSGST 154
           KS   G   M++E+YYGPP   P S        SY QTQ        I  KKGK TSGS+
Sbjct: 8   KSYSYGGGMMQMETYYGPPPGAPTSYDLRSYSASYSQTQMGYNTNRDIKFKKGKSTSGSS 67

Query: 155 SSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILY 202
           S S           W F DPEFQRKKRVASYKMYSVEGKMKGSFR SFRWLK KYTQ++Y
Sbjct: 68  SRS-----------WNFTDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQVVY 119

[Close]

BLAST of CmoCh12G005870 vs. NCBI nr
Match: gi|700192405|gb|KGN47609.1| (hypothetical protein Csa_6G364115 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 6.1e-23
Identity = 65/99 (65.66%), Postives = 70/99 (70.71%), Query Frame = 1


Query: 104 MEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSCSSSCSTSKPWRF-GDPEFQR 163
           MEIE YYGP          ++Q+S KKGK TSGS+S S           WRF  DPEFQR
Sbjct: 1   MEIEKYYGPSS--------KSQVSVKKGKSTSGSSSKS-----------WRFVADPEFQR 60

Query: 164 KKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW 202
           KKRVASYKMYSVEGKMKGSFR SFRWLK KYTQ+LYGWW
Sbjct: 61  KKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 80

[Close]

BLAST of CmoCh12G005870 vs. NCBI nr
Match: gi|645227417|ref|XP_008220505.1| (PREDICTED: uncharacterized protein LOC103320582 [Prunus mume])

HSP 1 Score: 115.9 bits (289), Expect = 8.0e-23
Identity = 68/122 (55.74%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 95  KSSMDGRSCMEIESYYGPPRPPPPS-------SYPQTQISG--------KKGKRTSGSTS 154
           KS   G   M++E+YYGPPRPP          SY QTQ++         KKGK TSGS+S
Sbjct: 8   KSYGTGSGTMQMENYYGPPRPPTSYELRSYSVSYSQTQMANNNNRDFKLKKGKSTSGSSS 67

Query: 155 SSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG 202
            S+          W   DPE QRKKRVASYKMYSVEGKMKGSFR SFRWLK K TQ++YG
Sbjct: 68  KSN----------WGLMDPELQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKCTQVVYG 119

[Close]

BLAST of CmoCh12G005870 vs. NCBI nr
Match: gi|596189902|ref|XP_007223475.1| (hypothetical protein PRUPE_ppa013495mg [Prunus persica])

HSP 1 Score: 115.9 bits (289), Expect = 8.0e-23
Identity = 68/122 (55.74%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 95  KSSMDGRSCMEIESYYGPPRPPPPS-------SYPQTQISG--------KKGKRTSGSTS 154
           KS   G   M++E+YYGPPRPP          SY QTQ++         KKGK TSGS+S
Sbjct: 8   KSYGTGSGTMQMENYYGPPRPPTSYELRSYSVSYAQTQMANNNNRDFKLKKGKSTSGSSS 67

Query: 155 SSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG 202
            S+          W   DPE QRKKRVASYKMYSVEGKMKGSFR SFRWLK K TQ++YG
Sbjct: 68  KSN----------WGLMDPELQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKCTQVVYG 119

The following BLAST results are available for this feature:

BLAST of CmoCh12G005870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh12G005870 vs. TrEMBL


Match Name	E-value	Identity	Description
W9R3W8_9ROSA	7.8e-25	57.14	Uncharacterized protein OS=Morus notabilis GN=L484_000591 PE=4 SV=1	[more]
A0A0A0KFK3_CUCSA	4.3e-23	65.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G364115 PE=4 SV=1	[more]
M5XFG9_PRUPE	5.6e-23	55.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013495mg PE=4 SV=1	[more]
B9RQS2_RICCO	7.3e-23	53.60	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0706040 PE=4 SV=1	[more]
A0A067KP56_JATCU	7.3e-23	52.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07646 PE=4 SV=1	[more]

BLAST of CmoCh12G005870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11970.1	1.5e-19	75.00	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	7.5e-11	42.57	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	1.4e-09	34.44	Protein of unknown function (DUF3511)	[more]
AT3G13910.1	4.1e-09	55.77	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	2.7e-08	50.00	Protein of unknown function (DUF3511)	[more]

BLAST of CmoCh12G005870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|703091265\|ref\|XP_010094301.1\|	1.1e-24	57.14	hypothetical protein L484_000591 [Morus notabilis]	[more]
gi\|1009134393\|ref\|XP_015884421.1\|	7.2e-24	57.72	PREDICTED: uncharacterized protein LOC107420071 [Ziziphus jujuba]	[more]
gi\|700192405\|gb\|KGN47609.1\|	6.1e-23	65.66	hypothetical protein Csa_6G364115 [Cucumis sativus]	[more]
gi\|645227417\|ref\|XP_008220505.1\|	8.0e-23	55.74	PREDICTED: uncharacterized protein LOC103320582 [Prunus mume]	[more]
gi\|596189902\|ref\|XP_007223475.1\|	8.0e-23	55.74	hypothetical protein PRUPE_ppa013495mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021899	DUF3511

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G005870.1	CmoCh12G005870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 155..199 score: 6.5
None	No IPR available	PANTHER	PTHR33193	FAMILY NOT NAMED	coord: 104..201 score: 9.2
None	No IPR available	PANTHER	PTHR33193:SF8	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDC16	coord: 104..201 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G005870	Cucsa.056220	Cucumber (Gy14) v1	cgycmoB0068
CmoCh12G005870	CmaCh12G006480	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G005870	Cla021990	Watermelon (97103) v1	cmowmB138
CmoCh12G005870	MELO3C011461	Melon (DHL92) v3.5.1	cmomeB153
CmoCh12G005870	ClCG08G010030	Watermelon (Charleston Gray)	cmowcgB166
CmoCh12G005870	Lsi06G002940	Bottle gourd (USVL1VR-Ls)	cmolsiB171
CmoCh12G005870	Lsi04G014150	Bottle gourd (USVL1VR-Ls)	cmolsiB166
CmoCh12G005870	Cp4.1LG06g02430	Cucurbita pepo (Zucchini)	cmocpeB172
CmoCh12G005870	Cp4.1LG18g03350	Cucurbita pepo (Zucchini)	cmocpeB161
CmoCh12G005870	Cp4.1LG04g10870	Cucurbita pepo (Zucchini)	cmocpeB171
CmoCh12G005870	MELO3C011461.2	Melon (DHL92) v3.6.1	cmomedB169
CmoCh12G005870	Cla97C08G152870	Watermelon (97103) v2	cmowmbB183
CmoCh12G005870	Bhi04G001163	Wax gourd	cmowgoB0200
CmoCh12G005870	CsGy6G018740	Cucumber (Gy14) v2	cgybcmoB702
CmoCh12G005870	CsGy1G027490	Cucumber (Gy14) v2	cgybcmoB053
CmoCh12G005870	Carg23950	Silver-seed gourd	carcmoB0948
CmoCh12G005870	Carg21726	Silver-seed gourd	carcmoB0440
CmoCh12G005870	Carg09297	Silver-seed gourd	carcmoB0193

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G005870	CmoCh09G003460	Cucurbita moschata (Rifu)	cmocmoB004
CmoCh12G005870	CmoCh05G004420	Cucurbita moschata (Rifu)	cmocmoB161

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G005870	Cucurbita pepo (Zucchini)	cmocpeB174