CmoCh12G004660 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G004660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionChaperone DnaJ
LocationCmo_Chr12 : 2857829 .. 2859920 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCATCGTCACGCCTGCTCCCCGTTCCGTCGCGCTTAGCGCCGTTGCCGCATTCCTTCTCCACCGATCTTCTACCTGTCGTCGGTCTCAGGTATTTTCTCTCTCCCCCCATATTTGTTTCATTTCTTACAACGGATGAACGTCTGCAAGCTCAAACGAATCCGAAAATCGGTTCGATTCAAAATCGATTTTGCCTAATCATTAACATTCTTATGATCAAGATTATTGGTTTCGTTATTTGTTTAGCCAAAAACTATAGAAACCGAAGCTTCAGGATTCTGCTAAATGATAGTTTATGCGAGGAGAGAAGATCGAGTGAAATGTCCAGTAAGTGTATGCGAGTATAAATCTTAACAATTCTGGGTTTAGTGGTTTGCTTTTATGAACTGTTTAATAGAGCTACGCTACCATCCTTTAGTTTGTAAACATTGAAGTTATTGTGTATTTGAAATCGTTGACAGCCCTTTAATCTTTGAGAACAAACTATCTCTGAGAAAAAAAAAAACTAAAAGAAAACTTCCTAACAGTACCTTAATGGTATTTATGCGGATTTGATAACCATTTTGATTTCTTACCTTTTATGGATCATAGATTTATCTTTCGTCGTAAAACATTTGAGTTCGAAGCTAAATTTAAAACTAAATAGTGATATGACAAACGGAGTGTAATAGCCCAAGCCCACCGCTAGTAGATATTGTCTTCTTTGGGCTTTCCCTCTCGAGTTTTCCCCTCAAGGTTTTTAGAATACCTCTGCAAGGAAGAGGTTTCTACACTCTTATACACAATGTTTCATTCTCCCCCCAACCGATATGGGATATCATTATCTACCCCCTTTTGAGACCCAGCATCCTTGCTGGCACACCACCTCGTGTCCACTCCCGAACCTAGTGTTTGGCTCTGATACCATTTGTAACAGCCCATGCTCACTACTAGCAAATATTGTCCTTTTTGAGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTCCTAGGACGCATCTGATAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTTCGTTCTTTTCTCCGACTAATGTGAGATATCACACTAAGTTAGTTTGATTTTAGGAATTTGATATTATCTATTCCATCAATTGTCATTATGCTTATAATTTCCGTTGCACATATCTCAACGTGTTTAGAAATTGAAGCCATTGCAAATGAGTTCAAGCAGTGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAGAGAAGATGCTAGCCATGACGAAATTCGAGCTAGCTACCGGTCTGCCCTCCTTAATTTCCACCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCAGACGACGTTGTGGGAGAACGATACTTCAAGGTGCAGAAGGCTTGGGAAGTCCTCGGCAGCTCGATGTCTCGTGCAGCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGATGCAATGGGTGCAGAGAGCATAGGCTTAGAGGATATGGCTGTGGAAGATAAAGGTGAGGTTGTAGAACTCTTTTATCAGTGCCGCTGTGGTGATTACTTCTTTATTGATTCTGTGGAGTTGGAGGAAATGGGATATCCAATGTTGAGGATTGGGAGTAAGGTTTCCTTAAGGACGTTCGATGCGTTGCCTGCATCTATTGTTTTGCCGTGTGGTTCGTGTTCTTTGAAAGTTCGTTTGTTAATCGATTCGGGTTCGTGTGCTTCAATTGATTGTTGAGTTTGAATGATTGAAATCATATTGCTCTGTTTTAAGCTCCATGGGATTTCTTTCTTGAATGATTGTGATGTTTGAGAGAGAGTTTATGAATATTTAGTGTTCTTGGTGGAGTTTGCATGGGTTTTCGTAAGTGGAAGTCGAACCTCACGTGTTGGACTCGTTCTGGATATAGCCCTATTTAGATTAGTTCACGCTCCCCTATTGGTGAAAAAATTTCTACACAATTATCTTGCAACGCTCGCCCATGCCATGACACATACATGTGCCACGTTGGAGAGCCACCCCATGTCTCCCCTTATATACATTCATATTTGTTCTGAAACTCATACGCATCAAAATGACAATGAGTCACGAGCCAATGTGAA

mRNA sequence

ATGCCTTCCATCGTCACGCCTGCTCCCCGTTCCGTCGCGCTTAGCGCCGTTGCCGCATTCCTTCTCCACCGATCTTCTACCTGTCGTCGGTCTCAGAAATTGAAGCCATTGCAAATGAGTTCAAGCAGTGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAGAGAAGATGCTAGCCATGACGAAATTCGAGCTAGCTACCGGTCTGCCCTCCTTAATTTCCACCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCAGACGACGTTGTGGGAGAACGATACTTCAAGGTGCAGAAGGCTTGGGAAGTCCTCGGCAGCTCGATGTCTCGTGCAGCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGATGCAATGGGTGCAGAGAGCATAGGCTTAGAGGATATGGCTGTGGAAGATAAAGGTGAGGTTGTAGAACTCTTTTATCAGTGCCGCTGTGGTGATTACTTCTTTATTGATTCTGTGGAGTTGGAGGAAATGGGATATCCAATGTTGAGGATTGGGAGTAAGGTTTCCTTAAGGACGTTCGATGCGTTGCCTGCATCTATTGTTTTGCCGTGTGGTTCGTGTTCTTTGAAAGTTCGTTTGTTAATCGATTCGGGTTCGTGTGCTTCAATTGATTGTTGAGTTTGAATGATTGAAATCATATTGCTCTGTTTTAAGCTCCATGGGATTTCTTTCTTGAATGATTGTGATGTTTGAGAGAGAGTTTATGAATATTTAGTGTTCTTGGTGGAGTTTGCATGGGTTTTCGTAAGTGGAAGTCGAACCTCACGTGTTGGACTCGTTCTGGATATAGCCCTATTTAGATTAGTTCACGCTCCCCTATTGGTGAAAAAATTTCTACACAATTATCTTGCAACGCTCGCCCATGCCATGACACATACATGTGCCACGTTGGAGAGCCACCCCATGTCTCCCCTTATATACATTCATATTTGTTCTGAAACTCATACGCATCAAAATGACAATGAGTCACGAGCCAATGTGAA

Coding sequence (CDS)

ATGCCTTCCATCGTCACGCCTGCTCCCCGTTCCGTCGCGCTTAGCGCCGTTGCCGCATTCCTTCTCCACCGATCTTCTACCTGTCGTCGGTCTCAGAAATTGAAGCCATTGCAAATGAGTTCAAGCAGTGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAGAGAAGATGCTAGCCATGACGAAATTCGAGCTAGCTACCGGTCTGCCCTCCTTAATTTCCACCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCAGACGACGTTGTGGGAGAACGATACTTCAAGGTGCAGAAGGCTTGGGAAGTCCTCGGCAGCTCGATGTCTCGTGCAGCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGATGCAATGGGTGCAGAGAGCATAGGCTTAGAGGATATGGCTGTGGAAGATAAAGGTGAGGTTGTAGAACTCTTTTATCAGTGCCGCTGTGGTGATTACTTCTTTATTGATTCTGTGGAGTTGGAGGAAATGGGATATCCAATGTTGAGGATTGGGAGTAAGGTTTCCTTAAGGACGTTCGATGCGTTGCCTGCATCTATTGTTTTGCCGTGTGGTTCGTGTTCTTTGAAAGTTCGTTTGTTAATCGATTCGGGTTCGTGTGCTTCAATTGATTGTTGA
Homology
[Close]
BLAST of CmoCh12G004660 vs. Swiss-Prot
Match: DPH4_YEAST (Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JJJ3 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.2e-09
Identity = 49/154 (31.82%), Postives = 75/154 (48.70%), Query Frame = 1 

Query: 49  TYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKAWEVL 108
           T+Y++L +  DA+ DEI+ +YR+ LLN HPDKL     KS  D V      K+Q A+++L
Sbjct: 8   THYEILRIPSDATQDEIKKAYRNRLLNTHPDKL----SKSIHDTVSNVTINKIQDAYKIL 67

Query: 109 GSSMSRAAYDR------ELQAAKGDAMGAESIGLEDMAV-EDKGEVVELFYQCR-CGDYF 168
            +  +R  YDR      + Q       G +   L+D +  EDK E +    +C+  G + 
Sbjct: 68  SNIKTRREYDRLILENYKRQGFHNCGDGLDEFSLDDFSFDEDKLEFMMNCPRCQFVGGFH 127

Query: 169 F-----------IDSVELEEMGYPMLRIGSKVSL 184
           F           +D++E    GY +L   S  SL
Sbjct: 128 FSESLLDECIDNVDAMERSHSGYQLLTQCSACSL 157

[Close]
BLAST of CmoCh12G004660 vs. Swiss-Prot
Match: DPH4_DICDI (DPH4 homolog OS=Dictyostelium discoideum GN=dph4 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09
Identity = 50/185 (27.03%), Postives = 81/185 (43.78%), Query Frame = 1 

Query: 40  SSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKL--------------QAMC 99
           ++S+    + YY++L +  DA  +EI+ SYR   L +HPDKL                + 
Sbjct: 6   NNSNKCENKNYYEILKVSIDADIEEIKKSYRKLALLYHPDKLNKEENIEENINNFSNCLV 65

Query: 100 QKSHPDDVVGERYFK-VQKAWEVLGSSMSRAAYDRELQAAKGDAMG-AESIGLEDMA-VE 159
             ++ ++    + F  +Q AWE L   + R  YD  L   K      ++ I L+DM  +E
Sbjct: 66  NNNNNNNNSNTKDFNDIQIAWETLKDDLLRKQYDSLLLEQKRQKYSVSDEIDLDDMEFIE 125

Query: 160 DKGEVVELFYQCRCGDYFFIDSVELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSL 208
           +  E V   Y CRCGD++ I   +L E                      S V+ C  CSL
Sbjct: 126 ENSEYV---YPCRCGDHYIITEDQLSE---------------------GSDVVCCSGCSL 166

[Close]
BLAST of CmoCh12G004660 vs. Swiss-Prot
Match: DPH4_CANGA (Diphthamide biosynthesis protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DPH4 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = 1 

Query: 49  TYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKAWEVL 108
           ++Y+VL +  DAS DEI+ +YR  LL  HPDK + +   S      G    ++Q+A+ VL
Sbjct: 10  SHYEVLGVPVDASTDEIKLTYRKMLLTLHPDKSKTVPIDSTIKIRSGVSINQIQEAYRVL 69

Query: 109 GSSMSRAAYDRELQAAK--------GDAMGAESIGLEDMAV-EDKGEVVELFYQCRCGDY 168
            +   RAAY+R L  +         GD  G +   L++    E+K E V    +C+ G  
Sbjct: 70  SNDQLRAAYNRALNDSNKLAGFNNFGD--GLDEFNLDEFEFNEEKLEYVMTCPRCQSGGG 129

Query: 169 FFIDSVELEE 170
           F +    LEE
Sbjct: 130 FVLSEDMLEE 137

[Close]
BLAST of CmoCh12G004660 vs. Swiss-Prot
Match: DNAJ_BURM1 (Chaperone protein DnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 1 

Query: 50  YYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFK-VQKAWEVL 109
           YY+VL + ++AS DEI+ +YR   + +HPD+        +PD+   E +FK V++A+E+L
Sbjct: 6   YYEVLGVAKNASDDEIKKAYRKLAMKYHPDR--------NPDNKDAEEHFKEVKEAYEML 65

Query: 110 GSSMSRAAYDRELQAAKGDAMG 131
             S  RAAYD+   A     MG
Sbjct: 66  SDSQKRAAYDQYGHAGVDPNMG 79

[Close]
BLAST of CmoCh12G004660 vs. Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 1 

Query: 47  GETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKAWE 106
           G  YY++L +  +AS +EI+ SYR  +  +HPD       K+  D    E++ K+ +A+E
Sbjct: 3   GNDYYEILEVSRNASAEEIKKSYRKMVFKYHPD-------KNPGDKKAEEKFKKISEAYE 62

Query: 107 VLGSSMSRAAYDR 120
           VL +   RAAYDR
Sbjct: 63  VLSNPEKRAAYDR 68

[Close]
BLAST of CmoCh12G004660 vs. TrEMBL
Match: A0A0A0LKX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360030 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.7e-81
Identity = 153/172 (88.95%), Postives = 162/172 (94.19%), Query Frame = 1 

Query: 39  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERY 98
           M+S SGSIGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC KSHPDD++GERY
Sbjct: 1   MNSISGSIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERY 60

Query: 99  FKVQKAWEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGD 158
           FKVQKAWEVLGSS SRA+YDRELQAAKGDA+GAESI LEDM VEDKGEVVEL YQCRCGD
Sbjct: 61  FKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELLYQCRCGD 120

Query: 159 YFFIDSVELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDS 211
           YFFIDS EL+EMGYP+LR GSKVSLRT +ALPAS+VLPCGSCSLKVRLLIDS
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDS 172

[Close]
BLAST of CmoCh12G004660 vs. TrEMBL
Match: F6HDU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04120 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 1 

Query: 45  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKA 104
           S  +TYYD+LS++EDAS++EIR  YRSA+LN HPDKLQ   + S+ D   G+R+ K+QKA
Sbjct: 7   SFEQTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNTDPESGDRFLKIQKA 66

Query: 105 WEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGDYFFIDS 164
           WE L    SRA YD  LQA++ D   AE + LEDM +ED G+V+ELFYQCRCGDYF +DS
Sbjct: 67  WETLSDPRSRAVYDSGLQASRQDTATAEDLSLEDMTIEDDGKVLELFYQCRCGDYFSVDS 126

Query: 165 VELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSGSCASI 217
            EL EMGY + R GSK+SL+T D+LPAS +LPCGSCSLKVRLLI++ +   +
Sbjct: 127 SELGEMGYAVFRDGSKISLQTPDSLPASFILPCGSCSLKVRLLINADTAVVV 178

[Close]
BLAST of CmoCh12G004660 vs. TrEMBL
Match: B9MVN0_POPTR (DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocarpa GN=POPTR_0014s03170g PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-52
Identity = 105/172 (61.05%), Postives = 133/172 (77.33%), Query Frame = 1 

Query: 39  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERY 98
           M +   SI ETYYDVLS++EDAS+ EIR SYRSA+LN+HPDKLQ   Q S P+D   +R+
Sbjct: 1   MLNWKNSIRETYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTRQASDPEDESDDRF 60

Query: 99  FKVQKAWEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGD 158
            KVQKAWE+LG+SMSRA YD +L+A + D   +E I LE+M VED GE+ E+FYQC+CGD
Sbjct: 61  MKVQKAWEILGNSMSRAVYDSKLRALRQDTEVSEDISLEEMMVEDNGEIFEMFYQCQCGD 120

Query: 159 YFFIDSVELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDS 211
           YF IDS E E+MGY + R    +S++  DALPAS+VLPCGSCSL+VRLLI++
Sbjct: 121 YFSIDSSEFEKMGYTLSRDECHISIQKPDALPASVVLPCGSCSLQVRLLINA 172

[Close]
BLAST of CmoCh12G004660 vs. TrEMBL
Match: M5XZ15_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012299mg PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-52
Identity = 105/173 (60.69%), Postives = 135/173 (78.03%), Query Frame = 1 

Query: 45  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKA 104
           SI ET+YD+LS+++DAS+++IRASYRSA+LN HPDK Q            G+R+ KVQKA
Sbjct: 7   SIQETHYDILSVKQDASYEDIRASYRSAILNSHPDKSQNTSGS-------GDRFLKVQKA 66

Query: 105 WEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGDYFFIDS 164
           WE+LG S +RA YD  L+A++ DA+ AE I LED+  ED GEV++L+YQCRCGDYFF+DS
Sbjct: 67  WEILGDSRARALYDIALRASRHDAIVAEDISLEDVMAEDAGEVIQLYYQCRCGDYFFVDS 126

Query: 165 VELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSGSCASID 218
           +ELE+MGY +LR GSK+S    +ALPAS+VLPCGSCSLKVR+LI+S    SID
Sbjct: 127 LELEKMGYALLRDGSKISFEAQNALPASLVLPCGSCSLKVRILINSDHFVSID 172

[Close]
BLAST of CmoCh12G004660 vs. TrEMBL
Match: B9R7F3_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1591240 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-52
Identity = 102/173 (58.96%), Postives = 133/173 (76.88%), Query Frame = 1 

Query: 45  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKA 104
           S+ ET+YD+LS++EDAS++EIR SYR +LLN HPDKLQ+  + S P D +G+R+ KVQKA
Sbjct: 7   SVQETHYDILSVKEDASYEEIRTSYRLSLLNHHPDKLQSAHRTSDPQDELGDRFLKVQKA 66

Query: 105 WEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGDYFFIDS 164
           W+VLG + SRA YD EL+A + D   AE + LEDM +ED GE +ELFYQCRCGDYF +DS
Sbjct: 67  WKVLGDARSRAIYDNELRALRKDTGVAEDVSLEDMMIEDGGEALELFYQCRCGDYFSVDS 126

Query: 165 VELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSGSCASID 218
           +EL +MGY +LR  +K+S  T D  PAS++LPCGSCSL+VRLLI++     ID
Sbjct: 127 LELGKMGYILLRDENKISFETTDVSPASVLLPCGSCSLQVRLLINADMKLQID 179

[Close]
BLAST of CmoCh12G004660 vs. TAIR10
Match: AT4G10130.1 (AT4G10130.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-45
Identity = 86/165 (52.12%), Postives = 120/165 (72.73%), Query Frame = 1 

Query: 46  IGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKAW 105
           + ETYY++LS++EDAS++EIR SYRSA+L+ HPDKL    + S  D    E++ K+QKAW
Sbjct: 8   VHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSDD----EKFLKIQKAW 67

Query: 106 EVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGDYFFIDSV 165
           EVL  +  R  YD +L++++ D + A+ I +EDM+VE  G+V++LFYQCRCGDYF +DS 
Sbjct: 68  EVLSDAELRVVYDNDLRSSRHDGITADEISIEDMSVEITGDVIDLFYQCRCGDYFCVDSS 127

Query: 166 ELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDS 211
           EL  MG+ +LR G  V ++   A  AS+VLPCGSCSLK R+ +DS
Sbjct: 128 ELGTMGFALLRDGDFVYVKRLGAFVASVVLPCGSCSLKTRVWVDS 168

[Close]
BLAST of CmoCh12G004660 vs. TAIR10
Match: AT1G74250.1 (AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = 1 

Query: 39  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERY 98
           M+SSS S    +Y+VL + +++S DEIR+SYR   L  HPDKL      S  +     ++
Sbjct: 1   MASSSRSEKRCHYEVLGISKESSPDEIRSSYRRLALQRHPDKLMKAAGLSEAEATA--QF 60

Query: 99  FKVQKAWEVLGSSMSRAAYDRE----LQAAKGDAMGAESIG 136
            ++  A+EVL     RA YD      L A    A G++S G
Sbjct: 61  QELVHAYEVLSDPKERAWYDSHRSQILFADHSSAGGSKSGG 99

[Close]
BLAST of CmoCh12G004660 vs. TAIR10
Match: AT5G18140.1 (AT5G18140.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 31/99 (31.31%), Postives = 49/99 (49.49%), Query Frame = 1 

Query: 24  RSSTCRRSQKLKPLQMSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQA 83
           RS   R    +     SSSS + G+ +Y VL +  +A+  +I+ +YR     FHPD    
Sbjct: 52  RSYRNRSKTTITSAAFSSSSNTGGQNHYAVLGIARNATQGDIKRAYRLLARKFHPD---- 111

Query: 84  MCQKSHPDDVVGERYFKVQKAWEVLGSSMSRAAYDRELQ 123
                + D   GE +  V+ ++EVL +  +R  YDR L+
Sbjct: 112 ----VNKDSKAGELFKSVRCSYEVLSNEATRTQYDRALK 142

[Close]
BLAST of CmoCh12G004660 vs. TAIR10
Match: AT3G14200.1 (AT3G14200.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.6e-06
Identity = 26/79 (32.91%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 40  SSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYF 99
           SS+S  I E  Y VL L+++ S  E+R++Y+   L +HPD+    C      +   +++ 
Sbjct: 3   SSNSEKINENLYAVLGLKKECSKTELRSAYKKLALRWHPDR----CSSMEFVEEAKKKFQ 62

Query: 100 KVQKAWEVLGSSMSRAAYD 119
            +Q+A+ VL  S  R  YD
Sbjct: 63  AIQEAYSVLSDSNKRFLYD 77

[Close]
BLAST of CmoCh12G004660 vs. TAIR10
Match: AT1G56300.1 (AT1G56300.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.6e-06
Identity = 25/77 (32.47%), Postives = 43/77 (55.84%), Query Frame = 1 

Query: 45  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGE---RYFKV 104
           ++  +YY +L +R+DAS  +IR +YR   + +HPD+       +    V GE   R+ ++
Sbjct: 9   NVRSSYYTILGIRKDASVSDIRTAYRKLAMKWHPDRY------ARNPGVAGEAKRRFQQI 68

Query: 105 QKAWEVLGSSMSRAAYD 119
           Q+A+ VL     R+ YD
Sbjct: 69  QEAYSVLNDENKRSMYD 79

[Close]
BLAST of CmoCh12G004660 vs. NCBI nr
Match: gi|659087788|ref|XP_008444636.1| (PREDICTED: DPH4 homolog [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 2.2e-82
Identity = 156/180 (86.67%), Postives = 166/180 (92.22%), Query Frame = 1 

Query: 39  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERY 98
           MSSSSG+IGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC+KSHPDD+ GERY
Sbjct: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60

Query: 99  FKVQKAWEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGD 158
           FKVQKAWEVLGS  SRA+YDRELQAAKGDA+GAESI LEDM VEDKGEVVELFYQCRCGD
Sbjct: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 120

Query: 159 YFFIDSVELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSGSCASIDC 218
            FFIDS EL+EMGYP+LR GSKVSLRT DALPAS+VLPCGSCSLKV L+ID+ S  SIDC
Sbjct: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVLLVIDTNSSVSIDC 180

[Close]
BLAST of CmoCh12G004660 vs. NCBI nr
Match: gi|449470051|ref|XP_004152732.1| (PREDICTED: DPH4 homolog [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 5.3e-81
Identity = 153/172 (88.95%), Postives = 162/172 (94.19%), Query Frame = 1 

Query: 39  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERY 98
           M+S SGSIGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC KSHPDD++GERY
Sbjct: 1   MNSISGSIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERY 60

Query: 99  FKVQKAWEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGD 158
           FKVQKAWEVLGSS SRA+YDRELQAAKGDA+GAESI LEDM VEDKGEVVEL YQCRCGD
Sbjct: 61  FKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELLYQCRCGD 120

Query: 159 YFFIDSVELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDS 211
           YFFIDS EL+EMGYP+LR GSKVSLRT +ALPAS+VLPCGSCSLKVRLLIDS
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDS 172

[Close]
BLAST of CmoCh12G004660 vs. NCBI nr
Match: gi|743787176|ref|XP_011030219.1| (PREDICTED: DPH4 homolog isoform X1 [Populus euphratica])

HSP 1 Score: 219.5 bits (558), Expect = 5.6e-54
Identity = 105/167 (62.87%), Postives = 133/167 (79.64%), Query Frame = 1 

Query: 45  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKA 104
           S  ETYYDVLS++EDAS+ EIR SYRSA+LN+HPDKLQ  CQ S P+D   +R+ KVQKA
Sbjct: 7   STRETYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTCQASDPEDESEDRFMKVQKA 66

Query: 105 WEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGDYFFIDS 164
           WE+LG+S+SRA YD +L+A + D   +E I LE+M VED GE+ E+FYQC+CGDYF IDS
Sbjct: 67  WEILGNSISRAVYDSKLRALRQDTEVSEDISLEEMMVEDNGEIFEMFYQCQCGDYFSIDS 126

Query: 165 VELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSG 212
            E E+MGY + R  S++S+   DALPAS+VLPCGSCSL+VRLLI++G
Sbjct: 127 SEFEKMGYTLSRDESQISIEKPDALPASVVLPCGSCSLQVRLLINAG 173

[Close]
BLAST of CmoCh12G004660 vs. NCBI nr
Match: gi|743787179|ref|XP_011030225.1| (PREDICTED: DPH4 homolog isoform X2 [Populus euphratica])

HSP 1 Score: 219.5 bits (558), Expect = 5.6e-54
Identity = 105/167 (62.87%), Postives = 133/167 (79.64%), Query Frame = 1 

Query: 45  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKVQKA 104
           S  ETYYDVLS++EDAS+ EIR SYRSA+LN+HPDKLQ  CQ S P+D   +R+ KVQKA
Sbjct: 7   STRETYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTCQASDPEDESEDRFMKVQKA 66

Query: 105 WEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEVVELFYQCRCGDYFFIDS 164
           WE+LG+S+SRA YD +L+A + D   +E I LE+M VED GE+ E+FYQC+CGDYF IDS
Sbjct: 67  WEILGNSISRAVYDSKLRALRQDTEVSEDISLEEMMVEDNGEIFEMFYQCQCGDYFSIDS 126

Query: 165 VELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSG 212
            E E+MGY + R  S++S+   DALPAS+VLPCGSCSL+VRLLI++G
Sbjct: 127 SEFEKMGYTLSRDESQISIEKPDALPASVVLPCGSCSLQVRLLINAG 173

[Close]
BLAST of CmoCh12G004660 vs. NCBI nr
Match: gi|1009169658|ref|XP_015865785.1| (PREDICTED: DPH4 homolog [Ziziphus jujuba])

HSP 1 Score: 216.9 bits (551), Expect = 3.6e-53
Identity = 106/177 (59.89%), Postives = 140/177 (79.10%), Query Frame = 1 

Query: 42  SSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERYFKV 101
           +  SI ET+Y++LS++EDA+++EIRASYRSA+LN HPDKLQ   + SH ++ +G  + KV
Sbjct: 9   NKNSILETHYNILSVKEDATYEEIRASYRSAILNSHPDKLQNASEASHAENELGASFLKV 68

Query: 102 QKAWEVLGSSMSRAAYDRELQAAKGDA-MGAESIGLEDMAVEDKGEVVELFYQCRCGDYF 161
           QKAWE+L  S SRA YD ELQA++ D+ + AE + LEDM VED GE VELFY CRCGDY+
Sbjct: 69  QKAWEILSDSRSRALYDIELQASRQDSTIAAEDVSLEDMIVEDTGEEVELFYHCRCGDYY 128

Query: 162 FIDSVELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSGSCASID 218
            +DS+EL +MG+P+LR G K+SL+  DALPAS++LPCGSCSL+VRLLI+S    SI+
Sbjct: 129 SVDSLELGKMGFPLLRDGRKISLQRGDALPASVILPCGSCSLRVRLLINSDIYVSIN 185

The following BLAST results are available for this feature:
BLAST of CmoCh12G004660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPH4_YEAST3.2e-0931.82Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
DPH4_DICDI4.2e-0927.03DPH4 homolog OS=Dictyostelium discoideum GN=dph4 PE=3 SV=1[more]
DPH4_CANGA1.3e-0733.08Diphthamide biosynthesis protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 1... [more]
DNAJ_BURM11.8e-0739.02Chaperone protein DnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=... [more]
DNAJ_ANAMM3.0e-0738.36Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 S... [more]
BLAST of CmoCh12G004660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKX8_CUCSA3.7e-8188.95Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360030 PE=4 SV=1[more]
F6HDU0_VITVI1.2e-5259.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04120 PE=4 SV=... [more]
B9MVN0_POPTR2.8e-5261.05DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocar... [more]
M5XZ15_PRUPE2.8e-5260.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012299mg PE=4 SV=1[more]
B9R7F3_RICCO3.6e-5258.96Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1591240 PE=4 SV=1[more]
BLAST of CmoCh12G004660 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10130.11.0e-4552.12 DNAJ heat shock N-terminal domain-containing protein[more]
AT1G74250.11.2e-0636.63 DNAJ heat shock N-terminal domain-containing protein[more]
AT5G18140.12.7e-0631.31 Chaperone DnaJ-domain superfamily protein[more]
AT3G14200.14.6e-0632.91 Chaperone DnaJ-domain superfamily protein[more]
AT1G56300.14.6e-0632.47 Chaperone DnaJ-domain superfamily protein[more]
BLAST of CmoCh12G004660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087788|ref|XP_008444636.1|2.2e-8286.67PREDICTED: DPH4 homolog [Cucumis melo][more]
gi|449470051|ref|XP_004152732.1|5.3e-8188.95PREDICTED: DPH4 homolog [Cucumis sativus][more]
gi|743787176|ref|XP_011030219.1|5.6e-5462.87PREDICTED: DPH4 homolog isoform X1 [Populus euphratica][more]
gi|743787179|ref|XP_011030225.1|5.6e-5462.87PREDICTED: DPH4 homolog isoform X2 [Populus euphratica][more]
gi|1009169658|ref|XP_015865785.1|3.6e-5359.89PREDICTED: DPH4 homolog [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR007872Znf_DHP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G004660.1CmoCh12G004660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 51..69
score: 1.2E-8coord: 113..132
score: 1.2E-8coord: 93..113
score: 1.2E-8coord: 69..84
score: 1.
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 46..123
score: 8.4
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 49..118
score: 2.0
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 48..113
score: 3.
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 49..121
score: 14
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 48..121
score: 1.57
IPR007872Zinc finger, DPH-typePFAMPF05207zf-CSLcoord: 133..207
score: 7.3
IPR007872Zinc finger, DPH-typePROFILEPS51074ZF_DPHcoord: 130..209
score: 14
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 42..169
score: 3.6
NoneNo IPR availablePANTHERPTHR21454:SF4DPH4 HOMOLOGcoord: 42..169
score: 3.6
NoneNo IPR availableunknownSSF144217CSL zinc fingercoord: 130..210
score: 5.49

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G004660Cucsa.232720Cucumber (Gy14) v1cgycmoB0641
CmoCh12G004660CmaCh12G005240Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G004660CmaCh05G001950Cucurbita maxima (Rimu)cmacmoB770
CmoCh12G004660Cla022553Watermelon (97103) v1cmowmB134
CmoCh12G004660Csa2G360030Cucumber (Chinese Long) v2cmocuB158
CmoCh12G004660MELO3C010884Melon (DHL92) v3.5.1cmomeB146
CmoCh12G004660ClCG08G015720Watermelon (Charleston Gray)cmowcgB161
CmoCh12G004660CSPI02G19370Wild cucumber (PI 183967)cmocpiB160
CmoCh12G004660Lsi08G014540Bottle gourd (USVL1VR-Ls)cmolsiB175
CmoCh12G004660Cp4.1LG11g01670Cucurbita pepo (Zucchini)cmocpeB154
CmoCh12G004660Cp4.1LG07g04570Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G004660MELO3C010884.2Melon (DHL92) v3.6.1cmomedB161
CmoCh12G004660CsaV3_2G028050Cucumber (Chinese Long) v3cmocucB0186
CmoCh12G004660Cla97C08G159300Watermelon (97103) v2cmowmbB178
CmoCh12G004660Bhi04G000296Wax gourdcmowgoB0190
CmoCh12G004660CsGy2G019230Cucumber (Gy14) v2cgybcmoB171
CmoCh12G004660Carg11841Silver-seed gourdcarcmoB0257
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh12G004660CmoCh05G001950Cucurbita moschata (Rifu)cmocmoB156
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G004660Cucurbita maxima (Rimu)cmacmoB032
CmoCh12G004660Cucurbita maxima (Rimu)cmacmoB453
CmoCh12G004660Wild cucumber (PI 183967)cmocpiB172
CmoCh12G004660Cucumber (Chinese Long) v2cmocuB169
CmoCh12G004660Melon (DHL92) v3.5.1cmomeB171
CmoCh12G004660Watermelon (Charleston Gray)cmowcgB149
CmoCh12G004660Watermelon (97103) v1cmowmB145
CmoCh12G004660Cucurbita pepo (Zucchini)cmocpeB166
CmoCh12G004660Cucurbita pepo (Zucchini)cmocpeB172
CmoCh12G004660Bottle gourd (USVL1VR-Ls)cmolsiB167
CmoCh12G004660Cucumber (Gy14) v2cgybcmoB449
CmoCh12G004660Melon (DHL92) v3.6.1cmomedB188
CmoCh12G004660Silver-seed gourdcarcmoB0145
CmoCh12G004660Silver-seed gourdcarcmoB0374
CmoCh12G004660Silver-seed gourdcarcmoB1042
CmoCh12G004660Cucumber (Chinese Long) v3cmocucB0200
CmoCh12G004660Watermelon (97103) v2cmowmbB166
CmoCh12G004660Wax gourdcmowgoB0222
CmoCh12G004660Cucurbita moschata (Rifu)cmocmoB004
CmoCh12G004660Cucurbita moschata (Rifu)cmocmoB141