CSPI02G19370 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCCCAAACGCACTTGATCTAAAAGAGTAAATAAAAAGAAGAAAAAAATATATATAATCCCCCGCCTTCTGCCTCTCCATTTTCCGTTGCGTCCTACCATCCCGCCGCCGCGTTCTCCACCTTGCTCAGCACCGCAAACCTTCTCTGCCGATCTTCTTCCCTCCGTTGGTATAAGGTATTTTCTATATTACATATATATCTTTTGAGTTTCGATACTTACAATGGAAGAACGTCTGTAAGCTCAAACGAACGGGAAGATCGGTTCGATTTGAGAATCGATTTTTCCTAATCAAGGAGTTCAGATATTCCTTTGATTGTTCATTCTTAAGATCATTATTTTGATTATCAGTTTCGCCAAAAACCATAGAACCAAGAGACTTTTTATGTTATGGAAGATTTGAGTTGAACATTATGCTAGTTTAAAATTGAACAACTTTGGGTCTTTAGTGTTTCGTAGAGATTGAAATTGCTGATAGCCCAGTAGTCTAAGAAAAGTACGCTACCTAGGAGAACAAATTAAAAGGTAACTTTCCCACAACACCTTAATATCTTATACCTATGGAATTTTACTAACTATTTCATTTGCTCAACGAATTTGATATCATTTTTTTCATTAAGCTCGAAATTGGAACTTTCAACATCTATACTGTTTACCCCTTTTCAATAGGCACTTGCACTGTAATGAGCTAATAATTTCCGTTGCATATATCTCAAGGTTGTTGGAAATTGAAGCCATAATACAATGAATTCAATCAGTGGCTCCATTGGTGAAACTTACTATGATGTACTGTCTTTAAGAGAAGATGCTAGCTTTGACGAAATTCGAGCCAGCTATCGGTCGGCTCTCCTTAATTTCCACCCTGATAAATTACAAGCCATGTGCCATAAATCTCATCCAGACGACATCATGGGAGAAAGATACTTCAAGGTGCAGAAGGCTTGGGAAGTTCTCGGCAGCTCGAAATCCCGTGCATCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGATGCAATTGGTGCAGAGAGCATAAGCTTAGAGGATATGGTTGTGGAAGATAAAGGTGAAGTTGTAGAACTTCTTTATCAGTGCCGTTGTGGGGATTACTTCTTTATTGATTCCGGGGAGTTGGATGAAATGGGATATCCATTGTTGAGGAATGGTAGTAAGGTTTCTTTAAGGACTCTAAATGCTTTGCCTGCTTCTGTTGTTTTACCCTGTGGTTCTTGCTCTTTGAAGGTTCGTTTGCTAATTGATTCGAATTGACTGTTGAATTTGAATGATCGAAATCACAACGATTTCTCTTAATATCCTTGCCACTTGTTTAAATTGAGAGAGTTTATGAGAATTTTGTGCTCTTCGGTAGAGTTTACGTGGGTTTTCTTTAATGCAACTTTGTTGAGTGAAGTTCAACAATTTTCCTAGGCTGTTTGGTTCAACTTTGTACATGTGGATTGTGGGGGTTACTAATCGGCATCTGAAAGGCATCAGCTTGAAGACTTCGTCGTGGACTGAATTGTCAAAATTTGAGAGAACAACCAGAGTGTACACCAAGAGATGGGGGAAAATCCATGGTAGTTTCCTTCTCTAAAATGACCGCCGGGTAAGATACATTGTTATTTCCTTCCTTCCCCTCGCAGGCTCTCTTGTAAAACCAAAGACGCCCGAAAACGAAGTATAACTGGAGGAGGAATTAATAAACAAGTCTGGCAAGGGGAATACTGACTGAACTATTTTAGAATAGGTTTAGTTAATTTTTGAGGTAGCGTATTTGCTAAATGATCAATTTGTTAATGACGACCTTTCTAGAAAACTTGTGGCAAACTGCCTAAGAAAATTCCCAAACTGGTGATTTGCTCCCTTGGATTGCTGCCTTTTTTTTTTTTTTTTTTTGTAAAGGGGATGATTCCTTGATAATTTTCTACTTCACTGACCCTTTTGCCTTTGGTGGTAATCTTTCATGCCCCCCTAGATGGGTTAAGAATTGGCTAAAGGAGGCCTTAGGAGGTTGGTGTCTTGAAAGCGAGATGAAGATTCCCATCGGATGTAAGGGTAGTAAAATGATTCTTTTTGTTGAAGTTTGCAGGATAACGTCTCGTGTTGGTGTTCTAGGCATACAAAGTTCATTAGTAATTGTAATATAATGA ATGAATTCAATCAGTGGCTCCATTGGTGAAACTTACTATGATGTACTGTCTTTAAGAGAAGATGCTAGCTTTGACGAAATTCGAGCCAGCTATCGGTCGGCTCTCCTTAATTTCCACCCTGATAAATTACAAGCCATGTGCCATAAATCTCATCCAGACGACATCATGGGAGAAAGATACTTCAAGGTGCAGAAGGCTTGGGAAGTTCTCGGCAGCTCGAAATCCCGTGCATCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGATGCAATTGGTGCAGAGAGCATAAGCTTAGAGGATATGGTTGTGGAAGATAAAGGTGAAGTTGTAGAACTTCTTTATCAGTGCCGTTGTGGGGATTACTTCTTTATTGATTCCGGGGAGTTGGATGAAATGGGATATCCATTGTTGAGGAATGGTAGTAAGGTTTCTTTAAGGACTCTAAATGCTTTGCCTGCTTCTGTTGTTTTACCCTGTGGTTCTTGCTCTTTGAAGGTTCGTTTGCTAATTGATTCGAATTGA ATGAATTCAATCAGTGGCTCCATTGGTGAAACTTACTATGATGTACTGTCTTTAAGAGAAGATGCTAGCTTTGACGAAATTCGAGCCAGCTATCGGTCGGCTCTCCTTAATTTCCACCCTGATAAATTACAAGCCATGTGCCATAAATCTCATCCAGACGACATCATGGGAGAAAGATACTTCAAGGTGCAGAAGGCTTGGGAAGTTCTCGGCAGCTCGAAATCCCGTGCATCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGATGCAATTGGTGCAGAGAGCATAAGCTTAGAGGATATGGTTGTGGAAGATAAAGGTGAAGTTGTAGAACTTCTTTATCAGTGCCGTTGTGGGGATTACTTCTTTATTGATTCCGGGGAGTTGGATGAAATGGGATATCCATTGTTGAGGAATGGTAGTAAGGTTTCTTTAAGGACTCTAAATGCTTTGCCTGCTTCTGTTGTTTTACCCTGTGGTTCTTGCTCTTTGAAGGTTCGTTTGCTAATTGATTCGAATTGA
BLAST of CSPI02G19370 vs. Swiss-Prot
Match: DPH4_DICDI (DPH4 homolog OS=Dictyostelium discoideum GN=dph4 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10 Identity = 45/156 (28.85%), Postives = 74/156 (47.44%), Query Frame = 1
BLAST of CSPI02G19370 vs. Swiss-Prot
Match: DPH4_YEAST (Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JJJ3 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10 Identity = 49/156 (31.41%), Postives = 75/156 (48.08%), Query Frame = 1
BLAST of CSPI02G19370 vs. Swiss-Prot
Match: DPH4_CANGA (Diphthamide biosynthesis protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DPH4 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1
BLAST of CSPI02G19370 vs. Swiss-Prot
Match: DNAJ_ANAMF (Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida) GN=dnaJ PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 1
BLAST of CSPI02G19370 vs. Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 1
BLAST of CSPI02G19370 vs. TrEMBL
Match: A0A0A0LKX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360030 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 7.5e-93 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI02G19370 vs. TrEMBL
Match: A0A061FCR1_THECC (DNAJ heat shock N-terminal domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_033874 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 6.9e-54 Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 1
BLAST of CSPI02G19370 vs. TrEMBL
Match: F6HDU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04120 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.4e-53 Identity = 101/167 (60.48%), Postives = 130/167 (77.84%), Query Frame = 1
BLAST of CSPI02G19370 vs. TrEMBL
Match: M5XZ15_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012299mg PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.5e-53 Identity = 105/167 (62.87%), Postives = 135/167 (80.84%), Query Frame = 1
BLAST of CSPI02G19370 vs. TrEMBL
Match: V4V7G1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003422mg PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 7.6e-53 Identity = 101/167 (60.48%), Postives = 134/167 (80.24%), Query Frame = 1
BLAST of CSPI02G19370 vs. TAIR10
Match: AT4G10130.1 (AT4G10130.1 DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 187.2 bits (474), Expect = 8.6e-48 Identity = 90/166 (54.22%), Postives = 122/166 (73.49%), Query Frame = 1
BLAST of CSPI02G19370 vs. TAIR10
Match: AT4G37480.1 (AT4G37480.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 9.6e-07 Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 1
BLAST of CSPI02G19370 vs. TAIR10
Match: AT1G74250.1 (AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 1
BLAST of CSPI02G19370 vs. TAIR10
Match: AT1G56300.1 (AT1G56300.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 32/113 (28.32%), Postives = 57/113 (50.44%), Query Frame = 1
BLAST of CSPI02G19370 vs. NCBI nr
Match: gi|449470051|ref|XP_004152732.1| (PREDICTED: DPH4 homolog [Cucumis sativus]) HSP 1 Score: 347.8 bits (891), Expect = 1.1e-92 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI02G19370 vs. NCBI nr
Match: gi|659087788|ref|XP_008444636.1| (PREDICTED: DPH4 homolog [Cucumis melo]) HSP 1 Score: 323.2 bits (827), Expect = 2.9e-85 Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 1
BLAST of CSPI02G19370 vs. NCBI nr
Match: gi|1009169666|ref|XP_015865789.1| (PREDICTED: DPH4 homolog isoform X1 [Ziziphus jujuba]) HSP 1 Score: 218.4 bits (555), Expect = 9.9e-54 Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 1
BLAST of CSPI02G19370 vs. NCBI nr
Match: gi|590592479|ref|XP_007017292.1| (DNAJ heat shock N-terminal domain-containing protein isoform 1 [Theobroma cacao]) HSP 1 Score: 218.4 bits (555), Expect = 9.9e-54 Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 1
BLAST of CSPI02G19370 vs. NCBI nr
Match: gi|1009169668|ref|XP_015865790.1| (PREDICTED: DPH4 homolog isoform X2 [Ziziphus jujuba]) HSP 1 Score: 218.4 bits (555), Expect = 9.9e-54 Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |