CmaCh12G005240 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G005240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionChaperone DnaJ
LocationCma_Chr12 : 2722892 .. 2724640 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCATCGTCACGCCTGCTCCCCGTTCCGTCGCGCTTAGCGCCGTTGCCGCATTCCCTCTCCACCGATCTTCTTCTATCTTTCGTCAGTCTCAGGTATTCTCTCTCTCCCCCCATATTTGTCTTTCAAGTTTCATTTCTTACAACGGATGAACGTCTGCAAGCTCAAACGAATCGGAAGATCGGTTCGATTCAAAATCGATTTTGCCTAATCATTAACATTCTTATAATCAAGATTATTGGTTTCGTTATTTGTTTAGCCAAAAACTATAGAAACCTAAGCTTCATGATTCTGCTAAATGATAGTTTATGCGAAGAGAGAAGATCGAGTGGAATGTCCAGTAAGTGTATACGAGTATAAATTTTAACAATTCTGGGTTTAGTGGTTTGCTTTTATGAACTGTTTAATAGAGCTACGCTACCATCCTTTAGTTTGTAAATATTGAAGTTATTATGTATTAACTTCCTAACAGTACCTTAATGGTATTTATGTGGATTTGATAACCATTTTGATTTCTTAACTTTTATCCATCATAGATTTATCTTTCTTCCTAAAACATTTGAGTTATGAGCTAAATTTAAAACTAAATAGTGATAGGATAAAATGAGTGTAACAGCCCAAGTCCACCATCTGCTGATATTATTCTCTTTGAACTTTCCCTTTCAAGCTTCCCCTCAAGGTTTTTAGAACGTGTCTACTAGAGAGAAGTTTCCACACTCTTATAAAAAATGTTTCATTCTCTTCCCGAACCGATGTAGGATATCACAATCCACCCCCCATTCGGGACCCAACGTCCTCATTGGCACTCATTTTCTTCTCCAATCGATGTGGGACCTCCCAATTCACCCCCTTCGAGGCCCAACGTCCTTGCTGGCACACTACCTCGTGTCCATCCCCTGAACTTGGTGTCTGGCTCTGATACCATTTGTAACAGCCCAAGCTCACCACTAGCAGATATTGTCTTCTTTGAGCTTTCTCTTCTGGGCTTCCCCTCGAGATTCCTAGAATGCATCTGATAGGGAAAGGTTTTCACGCTCTTATAAAAAATGTTTCGTTCTCTTCCCCAACCAATGTGAGATATCTCAGCGAGTTAGTTTGATTTTAGGAATTTGATATTATGTATTCCATCAAGTTTGTTGTCATTATGCTTATAATTTCCATTGCACATATCTCAAGGTGTTTAGAAATTGAAGCCATTGCAAATGAGTTCAAGCAGTGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAGAGAAGATGCTAGCCATGACGAAATTCGAGCTAGCTACCGGTCTGCCCTCCTTAACTTCCACCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCAAACGATGTTGTGGGAGAACGATACTTCAAGGTGCAGAAGGCTTGGGAAGTCCTCGGCAGCTCGATGTCTCGTGCAGCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGAGGCAATGGGTGCAGAGAGCATAGGCTTAGAGGATATGGCTGTGGAAGATAAAGGTGAAGTTGTAGAACTCCTTTATCAGTGTCGCTGTGGTGATTACTTCTTTATTGATTCTGGGGAGTTGGAGGAAATGGGATATCCAATGTTGAGGATTGGGAGTAAGGTTTCCTTAAGAACTTTGGATGCGTTGCCTGCATCTATTGTTTTGCCGTGTGGTTCGTGTTCTTTGAAAGTTCGTTTGTTAATCGATTCGGATTCGTGTGTTTCAATTGATTGTTGA

mRNA sequence

ATGCCTTCCATCGTCACGCCTGCTCCCCGTTCCGTCGCGCTTAGCGCCGTTGCCGCATTCCCTCTCCACCGATCTTCTTCTATCTTTCGTCAGTCTCAGCCATTGCAAATGAGTTCAAGCAGTGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAGAGAAGATGCTAGCCATGACGAAATTCGAGCTAGCTACCGGTCTGCCCTCCTTAACTTCCACCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCAAACGATGTTGTGGGAGAACGATACTTCAAGGTGCAGAAGGCTTGGGAAGTCCTCGGCAGCTCGATGTCTCGTGCAGCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGAGGCAATGGGTGCAGAGAGCATAGGCTTAGAGGATATGGCTGTGGAAGATAAAGGTGAAGTTGTAGAACTCCTTTATCAGTGTCGCTGTGGTGATTACTTCTTTATTGATTCTGGGGAGTTGGAGGAAATGGGATATCCAATGTTGAGGATTGGGAGTAAGGTTTCCTTAAGAACTTTGGATGCGTTGCCTGCATCTATTGTTTTGCCGTGTGGTTCGTGTTCTTTGAAAGTTCGTTTGTTAATCGATTCGGATTCGTGTGTTTCAATTGATTGTTGA

Coding sequence (CDS)

ATGCCTTCCATCGTCACGCCTGCTCCCCGTTCCGTCGCGCTTAGCGCCGTTGCCGCATTCCCTCTCCACCGATCTTCTTCTATCTTTCGTCAGTCTCAGCCATTGCAAATGAGTTCAAGCAGTGGCTCCATTGGTGAAACTTATTATGATGTACTGTCTTTGAGAGAAGATGCTAGCCATGACGAAATTCGAGCTAGCTACCGGTCTGCCCTCCTTAACTTCCACCCTGATAAGTTACAAGCTATGTGCCAGAAATCTCATCCAAACGATGTTGTGGGAGAACGATACTTCAAGGTGCAGAAGGCTTGGGAAGTCCTCGGCAGCTCGATGTCTCGTGCAGCTTATGACAGAGAGCTCCAAGCTGCCAAAGGGGAGGCAATGGGTGCAGAGAGCATAGGCTTAGAGGATATGGCTGTGGAAGATAAAGGTGAAGTTGTAGAACTCCTTTATCAGTGTCGCTGTGGTGATTACTTCTTTATTGATTCTGGGGAGTTGGAGGAAATGGGATATCCAATGTTGAGGATTGGGAGTAAGGTTTCCTTAAGAACTTTGGATGCGTTGCCTGCATCTATTGTTTTGCCGTGTGGTTCGTGTTCTTTGAAAGTTCGTTTGTTAATCGATTCGGATTCGTGTGTTTCAATTGATTGTTGA

Protein sequence

MPSIVTPAPRSVALSAVAAFPLHRSSSIFRQSQPLQMSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGDYFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSIDC
Homology
[Close]
BLAST of CmaCh12G005240 vs. Swiss-Prot
Match: DPH4_DICDI (DPH4 homolog OS=Dictyostelium discoideum GN=dph4 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.4e-10
Identity = 51/185 (27.57%), Postives = 82/185 (44.32%), Query Frame = 1 

Query: 38  SSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKL--------------QAMC 97
           ++S+    + YY++L +  DA  +EI+ SYR   L +HPDKL                + 
Sbjct: 6   NNSNKCENKNYYEILKVSIDADIEEIKKSYRKLALLYHPDKLNKEENIEENINNFSNCLV 65

Query: 98  QKSHPNDVVGERYFK-VQKAWEVLGSSMSRAAYDRELQAAKGEAMG-AESIGLEDMA-VE 157
             ++ N+    + F  +Q AWE L   + R  YD  L   K +    ++ I L+DM  +E
Sbjct: 66  NNNNNNNNSNTKDFNDIQIAWETLKDDLLRKQYDSLLLEQKRQKYSVSDEIDLDDMEFIE 125

Query: 158 DKGEVVELLYQCRCGDYFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSL 206
           +  E V   Y CRCGD++ I   +L E                      S V+ C  CSL
Sbjct: 126 ENSEYV---YPCRCGDHYIITEDQLSE---------------------GSDVVCCSGCSL 166

[Close]
BLAST of CmaCh12G005240 vs. Swiss-Prot
Match: DPH4_YEAST (Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JJJ3 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.6e-08
Identity = 49/173 (28.32%), Postives = 81/173 (46.82%), Query Frame = 1 

Query: 47  TYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKAWEVL 106
           T+Y++L +  DA+ DEI+ +YR+ LLN HPDKL     KS  + V      K+Q A+++L
Sbjct: 8   THYEILRIPSDATQDEIKKAYRNRLLNTHPDKL----SKSIHDTVSNVTINKIQDAYKIL 67

Query: 107 GSSMSRAAYDR------ELQAAKGEAMGAESIGLEDMAV-EDKGEVVELLYQCRCGDYFF 166
            +  +R  YDR      + Q       G +   L+D +  EDK E +    +C+    F 
Sbjct: 68  SNIKTRREYDRLILENYKRQGFHNCGDGLDEFSLDDFSFDEDKLEFMMNCPRCQFVGGFH 127

Query: 167 IDSGELEEMGYPMLRIGSKVSLRTLDALPAS-----IVLPCGSCSLKVRLLID 208
                L+E             +  +DA+  S     ++  C +CSL +++  D
Sbjct: 128 FSESLLDE------------CIDNVDAMERSHSGYQLLTQCSACSLWLKVNFD 164

[Close]
BLAST of CmaCh12G005240 vs. Swiss-Prot
Match: DPH4_CANGA (Diphthamide biosynthesis protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DPH4 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-08
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = 1 

Query: 47  TYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKAWEVL 106
           ++Y+VL +  DAS DEI+ +YR  LL  HPDK + +   S      G    ++Q+A+ VL
Sbjct: 10  SHYEVLGVPVDASTDEIKLTYRKMLLTLHPDKSKTVPIDSTIKIRSGVSINQIQEAYRVL 69

Query: 107 GSSMSRAAYDRELQAAKGEA------MGAESIGLEDMAV-EDKGEVVELLYQCRCGDYFF 166
            +   RAAY+R L  +   A       G +   L++    E+K E V    +C+ G  F 
Sbjct: 70  SNDQLRAAYNRALNDSNKLAGFNNFGDGLDEFNLDEFEFNEEKLEYVMTCPRCQSGGGFV 129

Query: 167 IDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCS--LKVRLLIDSD 210
           +    LEE          +  L   +     ++  C +CS  LKV   I+ +
Sbjct: 130 LSEDMLEEC--------IEDGLTESEEQGYQVLTQCTACSLWLKVNFFINDE 173

[Close]
BLAST of CmaCh12G005240 vs. Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 1 

Query: 45  GETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYF-KVQKAW 104
           G  YY++L +  +AS +EI+ SYR  +  +HPDK        +P D   E  F K+ +A+
Sbjct: 3   GNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDK--------NPGDKKAEEKFKKISEAY 62

Query: 105 EVLGSSMSRAAYDR 118
           EVL +   RAAYDR
Sbjct: 63  EVLSNPEKRAAYDR 68

[Close]
BLAST of CmaCh12G005240 vs. Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 1 

Query: 47  TYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKAWEVL 106
           TYYDVL ++ +A+ +E++ +YR   L +HPDK        +PN+  GE++ ++ +A+EVL
Sbjct: 6   TYYDVLGVKPNATQEELKKAYRKLALKYHPDK--------NPNE--GEKFKQISQAYEVL 65

Query: 107 GSSMSRAAYDR 118
             S  R  YD+
Sbjct: 66  ADSKKRELYDK 66

[Close]
BLAST of CmaCh12G005240 vs. TrEMBL
Match: A0A0A0LKX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360030 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.7e-82
Identity = 154/173 (89.02%), Postives = 166/173 (95.95%), Query Frame = 1 

Query: 37  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 96
           M+S SGSIGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC KSHP+D++GERY
Sbjct: 1   MNSISGSIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERY 60

Query: 97  FKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGD 156
           FKVQKAWEVLGSS SRA+YDRELQAAKG+A+GAESI LEDM VEDKGEVVELLYQCRCGD
Sbjct: 61  FKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELLYQCRCGD 120

Query: 157 YFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSD 210
           YFFIDSGEL+EMGYP+LR GSKVSLRTL+ALPAS+VLPCGSCSLKVRLLIDS+
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDSN 173

[Close]
BLAST of CmaCh12G005240 vs. TrEMBL
Match: F6HDU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04120 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-52
Identity = 101/172 (58.72%), Postives = 131/172 (76.16%), Query Frame = 1 

Query: 43  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKA 102
           S  +TYYD+LS++EDAS++EIR  YRSA+LN HPDKLQ   + S+ +   G+R+ K+QKA
Sbjct: 7   SFEQTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNTDPESGDRFLKIQKA 66

Query: 103 WEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGDYFFIDS 162
           WE L    SRA YD  LQA++ +   AE + LEDM +ED G+V+EL YQCRCGDYF +DS
Sbjct: 67  WETLSDPRSRAVYDSGLQASRQDTATAEDLSLEDMTIEDDGKVLELFYQCRCGDYFSVDS 126

Query: 163 GELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSI 215
            EL EMGY + R GSK+SL+T D+LPAS +LPCGSCSLKVRLLI++D+ V +
Sbjct: 127 SELGEMGYAVFRDGSKISLQTPDSLPASFILPCGSCSLKVRLLINADTAVVV 178

[Close]
BLAST of CmaCh12G005240 vs. TrEMBL
Match: M5XZ15_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012299mg PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.0e-52
Identity = 106/173 (61.27%), Postives = 135/173 (78.03%), Query Frame = 1 

Query: 43  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKA 102
           SI ET+YD+LS+++DAS+++IRASYRSA+LN HPDK Q            G+R+ KVQKA
Sbjct: 7   SIQETHYDILSVKQDASYEDIRASYRSAILNSHPDKSQNTSGS-------GDRFLKVQKA 66

Query: 103 WEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGDYFFIDS 162
           WE+LG S +RA YD  L+A++ +A+ AE I LED+  ED GEV++L YQCRCGDYFF+DS
Sbjct: 67  WEILGDSRARALYDIALRASRHDAIVAEDISLEDVMAEDAGEVIQLYYQCRCGDYFFVDS 126

Query: 163 GELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSID 216
            ELE+MGY +LR GSK+S    +ALPAS+VLPCGSCSLKVR+LI+SD  VSID
Sbjct: 127 LELEKMGYALLRDGSKISFEAQNALPASLVLPCGSCSLKVRILINSDHFVSID 172

[Close]
BLAST of CmaCh12G005240 vs. TrEMBL
Match: B9MVN0_POPTR (DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocarpa GN=POPTR_0014s03170g PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51
Identity = 106/178 (59.55%), Postives = 134/178 (75.28%), Query Frame = 1 

Query: 37  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 96
           M +   SI ETYYDVLS++EDAS+ EIR SYRSA+LN+HPDKLQ   Q S P D   +R+
Sbjct: 1   MLNWKNSIRETYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTRQASDPEDESDDRF 60

Query: 97  FKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGD 156
            KVQKAWE+LG+SMSRA YD +L+A + +   +E I LE+M VED GE+ E+ YQC+CGD
Sbjct: 61  MKVQKAWEILGNSMSRAVYDSKLRALRQDTEVSEDISLEEMMVEDNGEIFEMFYQCQCGD 120

Query: 157 YFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSI 215
           YF IDS E E+MGY + R    +S++  DALPAS+VLPCGSCSL+VRLLI++D  V I
Sbjct: 121 YFSIDSSEFEKMGYTLSRDECHISIQKPDALPASVVLPCGSCSLQVRLLINADIKVPI 178

[Close]
BLAST of CmaCh12G005240 vs. TrEMBL
Match: B9R7F3_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1591240 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 1 

Query: 43  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKA 102
           S+ ET+YD+LS++EDAS++EIR SYR +LLN HPDKLQ+  + S P D +G+R+ KVQKA
Sbjct: 7   SVQETHYDILSVKEDASYEEIRTSYRLSLLNHHPDKLQSAHRTSDPQDELGDRFLKVQKA 66

Query: 103 WEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGDYFFIDS 162
           W+VLG + SRA YD EL+A + +   AE + LEDM +ED GE +EL YQCRCGDYF +DS
Sbjct: 67  WKVLGDARSRAIYDNELRALRKDTGVAEDVSLEDMMIEDGGEALELFYQCRCGDYFSVDS 126

Query: 163 GELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSID 216
            EL +MGY +LR  +K+S  T D  PAS++LPCGSCSL+VRLLI++D  + ID
Sbjct: 127 LELGKMGYILLRDENKISFETTDVSPASVLLPCGSCSLQVRLLINADMKLQID 179

[Close]
BLAST of CmaCh12G005240 vs. TAIR10
Match: AT4G10130.1 (AT4G10130.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-45
Identity = 86/171 (50.29%), Postives = 123/171 (71.93%), Query Frame = 1 

Query: 44  IGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKAW 103
           + ETYY++LS++EDAS++EIR SYRSA+L+ HPDKL    + S  +    E++ K+QKAW
Sbjct: 8   VHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSDD----EKFLKIQKAW 67

Query: 104 EVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGDYFFIDSG 163
           EVL  +  R  YD +L++++ + + A+ I +EDM+VE  G+V++L YQCRCGDYF +DS 
Sbjct: 68  EVLSDAELRVVYDNDLRSSRHDGITADEISIEDMSVEITGDVIDLFYQCRCGDYFCVDSS 127

Query: 164 ELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSI 215
           EL  MG+ +LR G  V ++ L A  AS+VLPCGSCSLK R+ +DSD  + I
Sbjct: 128 ELGTMGFALLRDGDFVYVKRLGAFVASVVLPCGSCSLKTRVWVDSDMKIPI 174

[Close]
BLAST of CmaCh12G005240 vs. TAIR10
Match: AT3G62600.1 (AT3G62600.1 DNAJ heat shock family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06
Identity = 28/100 (28.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 45  GETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKAWE 104
           G++YYDVL + + AS ++I+ +YR   L +HPDK Q        N+    ++ ++  A+E
Sbjct: 24  GKSYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQG-------NEEATRKFAEINNAYE 83

Query: 105 VLGSSMSRAAYD-------RELQAAKGEAMGAESIGLEDM 138
           VL     R  Y+       ++  A  G   G   + ++D+
Sbjct: 84  VLSDEEKREIYNKYGEEGLKQFSANGGRGGGGGGMNMQDI 116

[Close]
BLAST of CmaCh12G005240 vs. TAIR10
Match: AT1G74250.1 (AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 1 

Query: 37  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 96
           M+SSS S    +Y+VL + +++S DEIR+SYR   L  HPDKL      S        ++
Sbjct: 1   MASSSRSEKRCHYEVLGISKESSPDEIRSSYRRLALQRHPDKLMKAAGLSEAEATA--QF 60

Query: 97  FKVQKAWEVLGSSMSRAAYDRE----LQAAKGEAMGAESIG 134
            ++  A+EVL     RA YD      L A    A G++S G
Sbjct: 61  QELVHAYEVLSDPKERAWYDSHRSQILFADHSSAGGSKSGG 99

[Close]
BLAST of CmaCh12G005240 vs. TAIR10
Match: AT3G14200.1 (AT3G14200.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.9e-06
Identity = 26/79 (32.91%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 38  SSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYF 97
           SS+S  I E  Y VL L+++ S  E+R++Y+   L +HPD+    C      +   +++ 
Sbjct: 3   SSNSEKINENLYAVLGLKKECSKTELRSAYKKLALRWHPDR----CSSMEFVEEAKKKFQ 62

Query: 98  KVQKAWEVLGSSMSRAAYD 117
            +Q+A+ VL  S  R  YD
Sbjct: 63  AIQEAYSVLSDSNKRFLYD 77

[Close]
BLAST of CmaCh12G005240 vs. TAIR10
Match: AT1G56300.1 (AT1G56300.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 7.8e-06
Identity = 25/77 (32.47%), Postives = 43/77 (55.84%), Query Frame = 1 

Query: 43  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGE---RYFKV 102
           ++  +YY +L +R+DAS  +IR +YR   + +HPD+       +    V GE   R+ ++
Sbjct: 9   NVRSSYYTILGIRKDASVSDIRTAYRKLAMKWHPDRY------ARNPGVAGEAKRRFQQI 68

Query: 103 QKAWEVLGSSMSRAAYD 117
           Q+A+ VL     R+ YD
Sbjct: 69  QEAYSVLNDENKRSMYD 79

[Close]
BLAST of CmaCh12G005240 vs. NCBI nr
Match: gi|659087788|ref|XP_008444636.1| (PREDICTED: DPH4 homolog [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 2.1e-82
Identity = 156/180 (86.67%), Postives = 169/180 (93.89%), Query Frame = 1 

Query: 37  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 96
           MSSSSG+IGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC+KSHP+D+ GERY
Sbjct: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60

Query: 97  FKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGD 156
           FKVQKAWEVLGS  SRA+YDRELQAAKG+A+GAESI LEDM VEDKGEVVEL YQCRCGD
Sbjct: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 120

Query: 157 YFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSIDC 216
            FFIDSGEL+EMGYP+LR GSKVSLRTLDALPAS+VLPCGSCSLKV L+ID++S VSIDC
Sbjct: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVLLVIDTNSSVSIDC 180

[Close]
BLAST of CmaCh12G005240 vs. NCBI nr
Match: gi|449470051|ref|XP_004152732.1| (PREDICTED: DPH4 homolog [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 8.2e-82
Identity = 154/173 (89.02%), Postives = 166/173 (95.95%), Query Frame = 1 

Query: 37  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 96
           M+S SGSIGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC KSHP+D++GERY
Sbjct: 1   MNSISGSIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERY 60

Query: 97  FKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGD 156
           FKVQKAWEVLGSS SRA+YDRELQAAKG+A+GAESI LEDM VEDKGEVVELLYQCRCGD
Sbjct: 61  FKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELLYQCRCGD 120

Query: 157 YFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSD 210
           YFFIDSGEL+EMGYP+LR GSKVSLRTL+ALPAS+VLPCGSCSLKVRLLIDS+
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDSN 173

[Close]
BLAST of CmaCh12G005240 vs. NCBI nr
Match: gi|1009169666|ref|XP_015865789.1| (PREDICTED: DPH4 homolog isoform X1 [Ziziphus jujuba])

HSP 1 Score: 214.5 bits (545), Expect = 1.8e-52
Identity = 109/190 (57.37%), Postives = 143/190 (75.26%), Query Frame = 1 

Query: 27  SIFRQSQPLQMSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKS 86
           + F+ S    M     SI ET+Y++LS++EDA+++EIRASYRSA+LN HPDKLQ   + S
Sbjct: 29  TFFQLSSAWTMLCCKNSILETHYNILSVKEDATYEEIRASYRSAILNSHPDKLQNASEAS 88

Query: 87  HPNDVVGERYFKVQKAWEVLGSSMSRAAYDRELQAAKGEA-MGAESIGLEDMAVEDKGEV 146
           H  + +G  + KVQKAWE+L  S SRA YD ELQA++ ++ + AE + LEDM VED GE 
Sbjct: 89  HAENELGASFLKVQKAWEILSDSRSRALYDIELQASRQDSTIAAEDVSLEDMIVEDTGEE 148

Query: 147 VELLYQCRCGDYFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLL 206
           VEL Y CRCGDY+ +DS EL +MG+P+LR G K+SL+  DALPAS++LPCGSCSL+VRLL
Sbjct: 149 VELFYHCRCGDYYSVDSLELGKMGFPLLRDGRKISLQRGDALPASVILPCGSCSLRVRLL 208

Query: 207 IDSDSCVSID 216
           I+SD  VSI+
Sbjct: 209 INSDIYVSIN 218

[Close]
BLAST of CmaCh12G005240 vs. NCBI nr
Match: gi|1009169658|ref|XP_015865785.1| (PREDICTED: DPH4 homolog [Ziziphus jujuba])

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-52
Identity = 106/177 (59.89%), Postives = 139/177 (78.53%), Query Frame = 1 

Query: 40  SSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKV 99
           +  SI ET+Y++LS++EDA+++EIRASYRSA+LN HPDKLQ   + SH  + +G  + KV
Sbjct: 9   NKNSILETHYNILSVKEDATYEEIRASYRSAILNSHPDKLQNASEASHAENELGASFLKV 68

Query: 100 QKAWEVLGSSMSRAAYDRELQAAKGEA-MGAESIGLEDMAVEDKGEVVELLYQCRCGDYF 159
           QKAWE+L  S SRA YD ELQA++ ++ + AE + LEDM VED GE VEL Y CRCGDY+
Sbjct: 69  QKAWEILSDSRSRALYDIELQASRQDSTIAAEDVSLEDMIVEDTGEEVELFYHCRCGDYY 128

Query: 160 FIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSID 216
            +DS EL +MG+P+LR G K+SL+  DALPAS++LPCGSCSL+VRLLI+SD  VSI+
Sbjct: 129 SVDSLELGKMGFPLLRDGRKISLQRGDALPASVILPCGSCSLRVRLLINSDIYVSIN 185

[Close]
BLAST of CmaCh12G005240 vs. NCBI nr
Match: gi|225432792|ref|XP_002283454.1| (PREDICTED: DPH4 homolog [Vitis vinifera])

HSP 1 Score: 213.0 bits (541), Expect = 5.2e-52
Identity = 101/172 (58.72%), Postives = 131/172 (76.16%), Query Frame = 1 

Query: 43  SIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERYFKVQKA 102
           S  +TYYD+LS++EDAS++EIR  YRSA+LN HPDKLQ   + S+ +   G+R+ K+QKA
Sbjct: 7   SFEQTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNTDPESGDRFLKIQKA 66

Query: 103 WEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGDYFFIDS 162
           WE L    SRA YD  LQA++ +   AE + LEDM +ED G+V+EL YQCRCGDYF +DS
Sbjct: 67  WETLSDPRSRAVYDSGLQASRQDTATAEDLSLEDMTIEDDGKVLELFYQCRCGDYFSVDS 126

Query: 163 GELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSI 215
            EL EMGY + R GSK+SL+T D+LPAS +LPCGSCSLKVRLLI++D+ V +
Sbjct: 127 SELGEMGYAVFRDGSKISLQTPDSLPASFILPCGSCSLKVRLLINADTAVVV 178

The following BLAST results are available for this feature:
BLAST of CmaCh12G005240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPH4_DICDI6.4e-1027.57DPH4 homolog OS=Dictyostelium discoideum GN=dph4 PE=3 SV=1[more]
DPH4_YEAST4.6e-0828.32Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
DPH4_CANGA7.8e-0829.07Diphthamide biosynthesis protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 1... [more]
DNAJ_ANAMM3.0e-0740.54Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 S... [more]
DNJA1_MOUSE3.0e-0738.03DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1[more]
BLAST of CmaCh12G005240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKX8_CUCSA5.7e-8289.02Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360030 PE=4 SV=1[more]
F6HDU0_VITVI3.6e-5258.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04120 PE=4 SV=... [more]
M5XZ15_PRUPE8.0e-5261.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012299mg PE=4 SV=1[more]
B9MVN0_POPTR1.0e-5159.55DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocar... [more]
B9R7F3_RICCO2.3e-5158.38Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1591240 PE=4 SV=1[more]
BLAST of CmaCh12G005240 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10130.13.8e-4550.29 DNAJ heat shock N-terminal domain-containing protein[more]
AT3G62600.12.0e-0628.00 DNAJ heat shock family protein[more]
AT1G74250.12.7e-0636.63 DNAJ heat shock N-terminal domain-containing protein[more]
AT3G14200.15.9e-0632.91 Chaperone DnaJ-domain superfamily protein[more]
AT1G56300.17.8e-0632.47 Chaperone DnaJ-domain superfamily protein[more]
BLAST of CmaCh12G005240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087788|ref|XP_008444636.1|2.1e-8286.67PREDICTED: DPH4 homolog [Cucumis melo][more]
gi|449470051|ref|XP_004152732.1|8.2e-8289.02PREDICTED: DPH4 homolog [Cucumis sativus][more]
gi|1009169666|ref|XP_015865789.1|1.8e-5257.37PREDICTED: DPH4 homolog isoform X1 [Ziziphus jujuba][more]
gi|1009169658|ref|XP_015865785.1|4.0e-5259.89PREDICTED: DPH4 homolog [Ziziphus jujuba][more]
gi|225432792|ref|XP_002283454.1|5.2e-5258.72PREDICTED: DPH4 homolog [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR007872Znf_DHP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G005240.1CmaCh12G005240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 67..82
score: 1.0E-8coord: 111..130
score: 1.0E-8coord: 49..67
score: 1.0E-8coord: 91..111
score: 1.
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 44..121
score: 7.4
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 47..116
score: 2.0
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 46..111
score: 3.
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 47..119
score: 14
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 46..119
score: 1.07
IPR007872Zinc finger, DPH-typePFAMPF05207zf-CSLcoord: 131..205
score: 8.7
IPR007872Zinc finger, DPH-typePROFILEPS51074ZF_DPHcoord: 128..207
score: 14
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 40..167
score: 3.5
NoneNo IPR availablePANTHERPTHR21454:SF4DPH4 HOMOLOGcoord: 40..167
score: 3.5
NoneNo IPR availableunknownSSF144217CSL zinc fingercoord: 128..210
score: 1.57

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G005240Cucsa.232720Cucumber (Gy14) v1cgycmaB0638
CmaCh12G005240Cla022553Watermelon (97103) v1cmawmB148
CmaCh12G005240Csa2G360030Cucumber (Chinese Long) v2cmacuB174
CmaCh12G005240MELO3C010884Melon (DHL92) v3.5.1cmameB156
CmaCh12G005240ClCG08G015720Watermelon (Charleston Gray)cmawcgB169
CmaCh12G005240CSPI02G19370Wild cucumber (PI 183967)cmacpiB175
CmaCh12G005240CmoCh05G001950Cucurbita moschata (Rifu)cmacmoB199
CmaCh12G005240CmoCh12G004660Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G005240Lsi08G014540Bottle gourd (USVL1VR-Ls)cmalsiB184
CmaCh12G005240Cp4.1LG11g01670Cucurbita pepo (Zucchini)cmacpeB179
CmaCh12G005240Cp4.1LG07g04570Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G005240MELO3C010884.2Melon (DHL92) v3.6.1cmamedB170
CmaCh12G005240CsaV3_2G028050Cucumber (Chinese Long) v3cmacucB0203
CmaCh12G005240Cla97C08G159300Watermelon (97103) v2cmawmbB194
CmaCh12G005240Bhi04G000296Wax gourdcmawgoB0194
CmaCh12G005240CsGy2G019230Cucumber (Gy14) v2cgybcmaB179
CmaCh12G005240Carg11841Silver-seed gourdcarcmaB0249
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G005240CmaCh05G001950Cucurbita maxima (Rimu)cmacmaB199
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G005240Cucumber (Chinese Long) v3cmacucB0215
CmaCh12G005240Cucurbita maxima (Rimu)cmacmaB182
CmaCh12G005240Cucumber (Chinese Long) v2cmacuB186
CmaCh12G005240Melon (DHL92) v3.5.1cmameB182
CmaCh12G005240Watermelon (Charleston Gray)cmawcgB160
CmaCh12G005240Watermelon (97103) v1cmawmB159
CmaCh12G005240Cucumber (Gy14) v2cgybcmaB479
CmaCh12G005240Melon (DHL92) v3.6.1cmamedB198
CmaCh12G005240Silver-seed gourdcarcmaB0135
CmaCh12G005240Silver-seed gourdcarcmaB0377
CmaCh12G005240Silver-seed gourdcarcmaB1067