CmoCh12G001020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G001020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	nudix hydrolase homolog 16
Location	Cmo_Chr12 : 555452 .. 558725 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTACCCTTGCCCGTTGATCTCAACGGTCATCTTCTCCTCCATATATAATCTCCCTTGGTTCTTAACCCACCGGATTCTCCCGCAAACTCCCCTCTGGACCCACTGGTTTTCTTTTCACCATCAATCCTAATCTCTCCCCTGTTTTGACCCGACCCCACCGCTAGATCCGCTTCAGCCGCAACCTTCCATCTCCATCTCTGTTTCTCTCTTTCTTCCAACCTTCCAACCCTAACCATCAATCGTCATTCATCGCCACTCTTCAATGGAGTTTCAGATTGCCTTCAACCGTCCATTCTGAGAGAAAAATGGACAATGTTGAAATTTCTCCCCTGCTTTAGGGATGTGCAGGATTTTGCATTCGCATTCGCATTCGTCTCTGAGTTTTGATCCCGCTGAACGATAGTTTATATACATATATTTATATGCATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATATTCCCACCATTATTTTTTAAGATTCGTAGACTCCAGCTATTTAATGTTTGTATGTTTGTGTCCTTCCTTGCTTCCAAGTCGTTTTCGTTGACCATCTTTGTCGAAGTTTTGTGAAAAATGAGGCCGCCATTGTCATTTTTTTTTACCACGTAATAGATATTGACTGCTTTGGTTTTCACTGTTGTTCTTGTTTCGGTATTGGTGTTTTTTTGATTCGTTGGTCGGTTCTTTAATCGATTAGGAACTCTATGGTTGTTTTCGGTTTAAACTACATTCCTACAGGTCTGCATAAATTTGAGTTCTTCTTTATTTTTAATGATCTGTGTATCGAGACCTGAGTGCTGAAGTTCTGCCAGATTATTGATTTGTGGTTGGGTATCCAGAATGTAATCTGTCACGAAAGTACTTTGGTGACACATTGCATTAATGAATCCGTCTTAGTAGGATTTAGGTCAGTTTCAGGAAGGAAAGGGGAAACTAATTTGATCGTGAATCTATTTATTCTTTCGCTCTGCTGATCTTACCTCATTCACCTCGGTAAAGCAGCTTGATCGATAGGGAGAGATGGCCGATCTTTCTTTTCTTACTCAGGGTGCTTCATCTCCTTTGCAGCGTGGTTAATTGTGGTGAATGGATGGACAGATGATGGTTGGGTTGGCACCATCTGGAAAGATGATGTCCTTTTGTCTGTCATAACTAGCAGCGACAGATTATGATAGCAGATTCATGACTTTTGATATTAGTGCATTGGCTTTGGCTGAAGTCAATCACATCCTTGATGACTTGATGGAAAGTTGGCCATCTATATTCCTTCCATAAAGCTATCAATAATTTCTTCCCTCTTCATCCAGTCTTGATGATTCAAGCGACGTGAGAAAAAGATACGACTAAATCTGCATAAATGGAATAACATCATGATCTTTGAGCACACTCAGTTGCATCATTCTCTTTTATACTTCTTTCAATGACTTCTTGTAGTTAATAAGAGATGGCTCATTTTAAATTTATCTCTATGGCCCTTCTGCATTGCATTTTATACATCCGGGCTGCTTGTGTTTTATGTTTTATTTAAACGAATGAAATGCAGTTGAATCAAATGATTGATCAATCAATGTGGTGGCAGATATAGTTTATGAATGCCTTTCTATTCTTTTGTAGGTGTATTCCTTTTAGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGTCTTTTGTTCCCGAAGGTGTGAAGTTGTTTCCCTCTCATTTCTGCTTCTCTCATATGAAGAAAGTATATGAGCTTATTTTATCTCTAACCATCAGCATTTTCTCTAAAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGTGAACTTATGGTGAAATAGTACTTTAAATGCTTGAATTGTTTTTTCTCATTTCCTTTTGTGAAAATTGAAGGTTGTTTCATCTAACGTATATATATGATTGGAAGAGGAATGCTGAGGAGTGTTGAGGGGTGTATCATTTTTAGTAGCTTTCTGTAGGACTACGCAATGAAGTGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGTAGATATGCATGAATGCACACTTCGGAGAGACTAGGGAGAGCTCTTGAGCCTCTTATCTCTTGAGTCATGTTGTTTTGATGTTATATCTGCATTAATTTGTCGTTGGTTAACATATGTGAGATCCCACATTGGTTGGTTGGAGAGGGGAACGAAGCATTCTTATAAGGGTGTTGAAACCTCTCCCTAGCCGTGAGGCTGATGGCAATATGTAACGGGCCAAAGCAGACAATATCGGTTAGCGATGGGTTGTTACAAATGGTATTAGAGCTAGACACCGAGTGGTGTGCCAGTGAGGATGCTGGTCCCGAAGGAGTTGGGTTGTGAGATCCTACATCGATTGGAGAGGAGAATGAACATTCCTTATAAGGGTATGGAAACCTCTTCCTAGCATTTTAAAACTGTGAGGCTGACCTTGATACCTAACGGGACAAAGTGGGTAATATTTGCTAGCGGCTGGTGTAGGATGTTATTGAATGTTGCATTTTTTGATAGAATAGTTTACTGCCTTTCTTGTTTATGTCCGTATGTTCGTTTGTTTATCCTCTCGGAGACCGACACGAAGAAGTGGCGTGTAAAATCTGTTGGCTTTGTTCAGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGATTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGACATCATCCAACCCAACCCGACCCAGCCACATGTAAGCACATTTCCTTTCAACTACGCTGCAATATTATGAATCTTTGAGGAACTAACACTGATTTCTTTCAAGATTTTTATTTATATACAGGCAGGCAATGTTTTGGTTGCTCATTTATTATAATTTCTGTACTACTGACCCCTTCAATTTGGAGGGCATTCAATATTATTTTTATATAAGCACCACTTCCAGCTTCCTTGAATTGAAGCTTTTGAAGCTTTTACA

mRNA sequence

CATTTTACCCTTGCCCGTTGATCTCAACGGTCATCTTCTCCTCCATATATAATCTCCCTTGGTTCTTAACCCACCGGATTCTCCCGCAAACTCCCCTCTGGACCCACTGGTTTTCTTTTCACCATCAATCCTAATCTCTCCCCTGTTTTGACCCGACCCCACCGCTAGATCCGCTTCAGCCGCAACCTTCCATCTCCATCTCTGTTTCTCTCTTTCTTCCAACCTTCCAACCCTAACCATCAATCGTCATTCATCGCCACTCTTCAATGGAGTTTCAGATTGCCTTCAACCGTCCATTCTGAGAGAAAAATGGACAATGTTGAAATTTCTCCCCTGCTTTAGGGATGTGCAGGATTTTGCATTCGCATTCGCATTCGTCTCTGAGTTTTGATCCCGCTGAACGATAGTTTATATACATATATTTATATGCATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGTCTTTTGTTCCCGAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGACTACGCAATGAAGTGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGATTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGACATCATCCAACCCAACCCGACCCAGCCACATGTAAGCACATTTCCTTTCAACTACGCTGCAATATTATGAATCTTTGAGGAACTAACACTGATTTCTTTCAAGATTTTTATTTATATACAGGCAGGCAATGTTTTGGTTGCTCATTTATTATAATTTCTGTACTACTGACCCCTTCAATTTGGAGGGCATTCAATATTATTTTTATATAAGCACCACTTCCAGCTTCCTTGAATTGAAGCTTTTGAAGCTTTTACA

Coding sequence (CDS)

ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGTCTTTTGTTCCCGAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGACTACGCAATGAAGTGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGATTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA

Homology

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BLAST of CmoCh12G001020 vs. Swiss-Prot
Match: NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.6e-60
Identity = 114/187 (60.96%), Postives = 133/187 (71.12%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           M DLVARTGR QQRY+ G RL+AG     Y +S+   +  S KV++VLMI + SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETV EAA REA+EEAGVRG+                  + FLG Y FKSK+ 
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGIL-----------------MDFLGNYEFKSKSH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF 
Sbjct: 121 QDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFC 170

Query: 181 KWHAQHM 183
           KWH + M
Sbjct: 181 KWHKEKM 170

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BLAST of CmoCh12G001020 vs. Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.9e-35
Identity = 81/178 (45.51%), Postives = 107/178 (60.11%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKV-----VEVLMIDTPSGPG 60
           MS L +RTGR +QRYD   RL++G   YR  +    E    V     +EVLM+ +P+   
Sbjct: 1   MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 61  LLFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKS 120
           L+FPKGGWE+DETV EAA REAIEEAGV+G+  E+                 LG++ F+S
Sbjct: 61  LVFPKGGWEDDETVLEAASREAIEEAGVKGILRELP----------------LGVWEFRS 120

Query: 121 KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           K+   E    G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Sbjct: 121 KSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRAL 162

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BLAST of CmoCh12G001020 vs. Swiss-Prot
Match: NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.6e-33
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YR----SSEGSSDEVSDKVVEVLMIDTPSGPGL 60
           MS+L ARTGR  QRYD   RL++G   YR      E S+    +  ++VLMI +P+   L
Sbjct: 1   MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61  LFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSK 120
           +FPKGGWE+DETV EAA REA+EEAGV+G+  E         +P       LG++ F+SK
Sbjct: 61  VFPKGGWEDDETVLEAASREAMEEAGVKGILRE---------DP-------LGVWEFRSK 120

Query: 121 TQQDEFS--PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           +   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 121 SSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

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BLAST of CmoCh12G001020 vs. Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.0e-29
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 1


Query: 4   LVARTGRQQQRYD-AGCRLIAG---YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGG 63
           LV+RTGR  QRYD AG R + G   YR  +   + V  +V++VL++    G G+LFPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEF 123
           WE DE++EEAA+RE IEEAGV G   E                  LG + +KSK  +   
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEK-----------------LGKWQYKSK--RHSI 162

Query: 124 SPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
             +G     M+AL V++E E WPE   R R WV++ EA E C++ WMR+AL
Sbjct: 163 IHDGY----MFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMREAL 190

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BLAST of CmoCh12G001020 vs. Swiss-Prot
Match: NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 4   LVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGW 63
           L +RTGRQ QRY+ G R + G   YR    +  ++SD+V EVL+I +  G  L+FPKGGW
Sbjct: 9   LASRTGRQFQRYNKGRRQVVGCVPYRFKLSNDGKISDEV-EVLVISSQKGHALMFPKGGW 68

Query: 64  ENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFS 123
           E DE+VEEAA RE +EEAGV            G++E        LG + F SK++   + 
Sbjct: 69  ELDESVEEAASRECLEEAGVL-----------GNVEHQ------LGKWDFLSKSRGTYY- 128

Query: 124 PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
            EGL    M+ + V E+LE WPEQ+ R R W+ + EA E+CR  WM++AL
Sbjct: 129 -EGL----MFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEAL 154

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BLAST of CmoCh12G001020 vs. TrEMBL
Match: M5X2H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012156mg PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.6e-67
Identity = 125/187 (66.84%), Postives = 147/187 (78.61%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           M DLVARTGR QQRY+AGCRL+AG     Y++S+ + D  S+K++EVLMI++PSGPGLLF
Sbjct: 1   MCDLVARTGRHQQRYEAGCRLVAGCIPFRYKNSDETGDANSEKIIEVLMINSPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREA+EEAGVRG                   + FLG YHFKSKT 
Sbjct: 61  PKGGWENDETVEEAAVREAVEEAGVRG-----------------ELMDFLGFYHFKSKTH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEG+CRAAM+ALFV EELESWPEQ+TRNR+W+T+ EA  SCRHAWMR+AL  GF+
Sbjct: 121 QDEFSPEGVCRAAMFALFVKEELESWPEQSTRNRTWLTVAEAFVSCRHAWMREALQDGFS 170

Query: 181 KWHAQHM 183
           KWHA+ M
Sbjct: 181 KWHAEKM 170

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BLAST of CmoCh12G001020 vs. TrEMBL
Match: A0A0D2VQ31_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G216800 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-62
Identity = 124/186 (66.67%), Postives = 141/186 (75.81%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGR QQRY+AG RL+AG     YRSS  + D    KVVEVLMI++ SGPGLLF
Sbjct: 1   MSDLVARTGRLQQRYEAGFRLVAGCIPFRYRSSNEADDVKFGKVVEVLMINSTSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   + F+G YHFKSKT 
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------DLMDFIGFYHFKSKTH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLC+AAM+ALFV EEL SWPEQ+TR R+W+TIP+A++SCRH WM+DAL  GF 
Sbjct: 121 QDEFSPEGLCKAAMFALFVKEELNSWPEQSTRTRNWLTIPKALQSCRHEWMKDALENGFC 169

Query: 181 KWHAQH 182
           KW AQ+
Sbjct: 181 KWLAQN 169

[Close]

BLAST of CmoCh12G001020 vs. TrEMBL
Match: A0A067KBU2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16653 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.3e-62
Identity = 122/187 (65.24%), Postives = 140/187 (74.87%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MS+LVARTGR QQRYD+GCRL+AG     YRS + + D   +KVVEVLMI++ SGPGLLF
Sbjct: 1   MSELVARTGRHQQRYDSGCRLVAGCIPFKYRSCDKNEDGTCEKVVEVLMINSNSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAA REA+EEAGVRG            L  L P+  FLG Y FKSKT 
Sbjct: 61  PKGGWENDETVEEAAAREALEEAGVRG-----------DLMGLCPFQHFLGHYEFKSKTL 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEF PEGLC+AAM+AL V EEL+SWPEQNTR RSW+TIPEA E CR+ WM +AL  GF 
Sbjct: 121 QDEFCPEGLCKAAMFALLVKEELQSWPEQNTRRRSWLTIPEARECCRYKWMEEALEEGFI 176

Query: 181 KWHAQHM 183
           KWH + +
Sbjct: 181 KWHNEQI 176

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BLAST of CmoCh12G001020 vs. TrEMBL
Match: V4LY33_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021582mg PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.6e-62
Identity = 121/187 (64.71%), Postives = 140/187 (74.87%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           M DLVARTGR QQRY+ G RL+AG     Y +S+   +  S KVV+VLMI + SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCVPFRYINSDEDGNSESGKVVQVLMISSSSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETV+EAAVREA+EEAGVRG+                  +GFLG Y FKSKT 
Sbjct: 61  PKGGWENDETVKEAAVREAVEEAGVRGIL-----------------MGFLGDYEFKSKTH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLC+AAMYAL+V EELE+WPEQ TR R+W+TI EA+ESCRHAWM+DALV GF 
Sbjct: 121 QDEFSPEGLCKAAMYALYVKEELETWPEQKTRTRTWLTIEEAVESCRHAWMKDALVEGFC 170

Query: 181 KWHAQHM 183
           KWH + M
Sbjct: 181 KWHKEKM 170

[Close]

BLAST of CmoCh12G001020 vs. TrEMBL
Match: M1C6P5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023697 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-61
Identity = 121/182 (66.48%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAGYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGW 60
           MSDLVARTGR QQRY+ G RLIAG+R  E + ++ S+K+VEVLMI++ SGPGLLFPKGGW
Sbjct: 1   MSDLVARTGRHQQRYEEGYRLIAGFRDMEQNGNDTSEKIVEVLMINSTSGPGLLFPKGGW 60

Query: 61  ENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFS 120
           ENDETV+EAAVREAIEEAGVRG                   + FLG Y FKSKT QDEFS
Sbjct: 61  ENDETVKEAAVREAIEEAGVRG-----------------DLVHFLGYYPFKSKTLQDEFS 120

Query: 121 PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQ 180
           PEGLCRAAM+ALFV EEL+ WPEQ+ R R+W+TIPEAIE CRH WMR AL  GF KWH  
Sbjct: 121 PEGLCRAAMFALFVKEELDCWPEQSRRERTWLTIPEAIECCRHPWMRKALEEGFLKWHEA 165

Query: 181 HM 183
            M
Sbjct: 181 GM 165

[Close]

BLAST of CmoCh12G001020 vs. TAIR10
Match: AT3G12600.1 (AT3G12600.1 nudix hydrolase homolog 16)

HSP 1 Score: 231.5 bits (589), Expect = 4.3e-61
Identity = 114/187 (60.96%), Postives = 133/187 (71.12%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           M DLVARTGR QQRY+ G RL+AG     Y +S+   +  S KV++VLMI + SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETV EAA REA+EEAGVRG+                  + FLG Y FKSK+ 
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGIL-----------------MDFLGNYEFKSKSH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF 
Sbjct: 121 QDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFC 170

Query: 181 KWHAQHM 183
           KWH + M
Sbjct: 181 KWHKEKM 170

[Close]

BLAST of CmoCh12G001020 vs. TAIR10
Match: AT1G12880.1 (AT1G12880.1 nudix hydrolase homolog 12)

HSP 1 Score: 149.1 bits (375), Expect = 2.8e-36
Identity = 81/178 (45.51%), Postives = 107/178 (60.11%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKV-----VEVLMIDTPSGPG 60
           MS L +RTGR +QRYD   RL++G   YR  +    E    V     +EVLM+ +P+   
Sbjct: 1   MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 61  LLFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKS 120
           L+FPKGGWE+DETV EAA REAIEEAGV+G+  E+                 LG++ F+S
Sbjct: 61  LVFPKGGWEDDETVLEAASREAIEEAGVKGILRELP----------------LGVWEFRS 120

Query: 121 KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           K+   E    G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Sbjct: 121 KSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRAL 162

[Close]

BLAST of CmoCh12G001020 vs. TAIR10
Match: AT3G26690.1 (AT3G26690.1 nudix hydrolase homolog 13)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YR----SSEGSSDEVSDKVVEVLMIDTPSGPGL 60
           MS+L ARTGR  QRYD   RL++G   YR      E S+    +  ++VLMI +P+   L
Sbjct: 1   MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61  LFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSK 120
           +FPKGGWE+DETV EAA REA+EEAGV+G+  E         +P       LG++ F+SK
Sbjct: 61  VFPKGGWEDDETVLEAASREAMEEAGVKGILRE---------DP-------LGVWEFRSK 120

Query: 121 TQQDEFS--PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           +   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 121 SSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

[Close]

BLAST of CmoCh12G001020 vs. TAIR10
Match: AT1G18300.1 (AT1G18300.1 nudix hydrolase homolog 4)

HSP 1 Score: 128.3 bits (321), Expect = 5.1e-30
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 1


Query: 4   LVARTGRQQQRYD-AGCRLIAG---YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGG 63
           LV+RTGR  QRYD AG R + G   YR  +   + V  +V++VL++    G G+LFPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEF 123
           WE DE++EEAA+RE IEEAGV G   E                  LG + +KSK  +   
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEK-----------------LGKWQYKSK--RHSI 162

Query: 124 SPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
             +G     M+AL V++E E WPE   R R WV++ EA E C++ WMR+AL
Sbjct: 163 IHDGY----MFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMREAL 190

[Close]

BLAST of CmoCh12G001020 vs. TAIR10
Match: AT2G01670.1 (AT2G01670.1 nudix hydrolase homolog 17)

HSP 1 Score: 124.4 bits (311), Expect = 7.3e-29
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 4   LVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGW 63
           L +RTGRQ QRY+ G R + G   YR    +  ++SD+V EVL+I +  G  L+FPKGGW
Sbjct: 9   LASRTGRQFQRYNKGRRQVVGCVPYRFKLSNDGKISDEV-EVLVISSQKGHALMFPKGGW 68

Query: 64  ENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFS 123
           E DE+VEEAA RE +EEAGV            G++E        LG + F SK++   + 
Sbjct: 69  ELDESVEEAASRECLEEAGVL-----------GNVEHQ------LGKWDFLSKSRGTYY- 128

Query: 124 PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
            EGL    M+ + V E+LE WPEQ+ R R W+ + EA E+CR  WM++AL
Sbjct: 129 -EGL----MFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEAL 154

[Close]

BLAST of CmoCh12G001020 vs. NCBI nr
Match: gi|659089207|ref|XP_008445383.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 3.9e-80
Identity = 151/190 (79.47%), Postives = 159/190 (83.68%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGR QQRYDAGCRLIAG     YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGDYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSP+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWMRDAL IGFN
Sbjct: 121 QDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMRDALAIGFN 173

Query: 181 KWHAQHMNDE 186
           KWHA++++DE
Sbjct: 181 KWHAENISDE 173

[Close]

BLAST of CmoCh12G001020 vs. NCBI nr
Match: gi|778715798|ref|XP_011657455.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 151/190 (79.47%), Postives = 158/190 (83.16%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGR QQRYDAGCRLIAG     YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGDYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSP+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWM DALVIGFN
Sbjct: 121 QDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMTDALVIGFN 173

Query: 181 KWHAQHMNDE 186
           KWHA++ +DE
Sbjct: 181 KWHAENTSDE 173

[Close]

BLAST of CmoCh12G001020 vs. NCBI nr
Match: gi|659089211|ref|XP_008445385.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X3 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 4.6e-73
Identity = 141/185 (76.22%), Postives = 150/185 (81.08%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAGYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGW 60
           MSDLVARTGR QQR      +   YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLFPKGGW
Sbjct: 1   MSDLVARTGRHQQRC-----IPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGW 60

Query: 61  ENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFS 120
           ENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQQDEFS
Sbjct: 61  ENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGDYHFKSKTQQDEFS 120

Query: 121 PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQ 180
           P+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWMRDAL IGFNKWHA+
Sbjct: 121 PDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMRDALAIGFNKWHAE 163

Query: 181 HMNDE 186
           +++DE
Sbjct: 181 NISDE 163

[Close]

BLAST of CmoCh12G001020 vs. NCBI nr
Match: gi|778715801|ref|XP_011657456.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.3e-72
Identity = 141/185 (76.22%), Postives = 149/185 (80.54%), Query Frame = 1


Query: 1   MSDLVARTGRQQQRYDAGCRLIAGYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGW 60
           MSDLVARTGR QQR      +   YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLFPKGGW
Sbjct: 1   MSDLVARTGRHQQRC-----IPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGW 60

Query: 61  ENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFS 120
           ENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQQDEFS
Sbjct: 61  ENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGDYHFKSKTQQDEFS 120

Query: 121 PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQ 180
           P+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWM DALVIGFNKWHA+
Sbjct: 121 PDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMTDALVIGFNKWHAE 163

Query: 181 HMNDE 186
           + +DE
Sbjct: 181 NTSDE 163

[Close]

BLAST of CmoCh12G001020 vs. NCBI nr
Match: gi|659089213|ref|XP_008445386.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X4 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-68
Identity = 128/161 (79.50%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 25  YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGLR 84
           YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRG  
Sbjct: 8   YRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRG-- 67

Query: 85  NEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFSPEGLCRAAMYALFVNEELESWPEQ 144
                            +GFLG YHFKSKTQQDEFSP+GLCRAAMYAL V EELE WPEQ
Sbjct: 68  ---------------ELMGFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQ 127

Query: 145 NTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE 186
           NTRNRSWVTIPEAIE CRHAWMRDAL IGFNKWHA++++DE
Sbjct: 128 NTRNRSWVTIPEAIEKCRHAWMRDALAIGFNKWHAENISDE 151

The following BLAST results are available for this feature:

BLAST of CmoCh12G001020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NUD16_ARATH	7.6e-60	60.96	Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1	[more]
NUD12_ARATH	4.9e-35	45.51	Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1	[more]
NUD13_ARATH	4.6e-33	45.25	Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1	[more]
NUDT4_ARATH	9.0e-29	43.27	Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1	[more]
NUD17_ARATH	1.3e-27	44.12	Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1	[more]

BLAST of CmoCh12G001020 vs. TrEMBL


Match Name	E-value	Identity	Description
M5X2H7_PRUPE	7.6e-67	66.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012156mg PE=4 SV=1	[more]
A0A0D2VQ31_GOSRA	2.5e-62	66.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G216800 PE=4 SV=1	[more]
A0A067KBU2_JATCU	4.3e-62	65.24	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16653 PE=4 SV=1	[more]
V4LY33_EUTSA	9.6e-62	64.71	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021582mg PE=4 SV=1	[more]
M1C6P5_SOLTU	1.3e-61	66.48	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023697 PE=4 SV=1	[more]

BLAST of CmoCh12G001020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12600.1	4.3e-61	60.96	nudix hydrolase homolog 16	[more]
AT1G12880.1	2.8e-36	45.51	nudix hydrolase homolog 12	[more]
AT3G26690.1	2.6e-34	45.25	nudix hydrolase homolog 13	[more]
AT1G18300.1	5.1e-30	43.27	nudix hydrolase homolog 4	[more]
AT2G01670.1	7.3e-29	44.12	nudix hydrolase homolog 17	[more]

BLAST of CmoCh12G001020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089207\|ref\|XP_008445383.1\|	3.9e-80	79.47	PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo]	[more]
gi\|778715798\|ref\|XP_011657455.1\|	1.1e-79	79.47	PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis sativus]	[more]
gi\|659089211\|ref\|XP_008445385.1\|	4.6e-73	76.22	PREDICTED: nudix hydrolase 16, mitochondrial isoform X3 [Cucumis melo]	[more]
gi\|778715801\|ref\|XP_011657456.1\|	1.3e-72	76.22	PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus]	[more]
gi\|659089213\|ref\|XP_008445386.1\|	2.6e-68	79.50	PREDICTED: nudix hydrolase 16, mitochondrial isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000086	NUDIX_hydrolase_dom
IPR015797	NUDIX_hydrolase-like_dom_sf
IPR020084	NUDIX_hydrolase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G001020.1	CmoCh12G001020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 42..166 score: 7.6
IPR000086	NUDIX hydrolase domain	PROFILE	PS51462	NUDIX	coord: 24..174 score: 10
IPR015797	NUDIX hydrolase domain-like	GENE3D	G3DSA:3.90.79.10		coord: 40..170 score: 4.4
IPR015797	NUDIX hydrolase domain-like	unknown	SSF55811	Nudix	coord: 41..181 score: 6.77
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 58..79 scor
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 102..178 score: 4.1E-96coord: 1..86 score: 4.1
None	No IPR available	PANTHER	PTHR12629:SF9	NUDIX HYDROLASE 16, MITOCHONDRIAL	coord: 1..86 score: 4.1E-96coord: 102..178 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G001020	Cucsa.005110	Cucumber (Gy14) v1	cgycmoB0089
CmoCh12G001020	CmaCh12G001260	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G001020	CmaCh05G004690	Cucurbita maxima (Rimu)	cmacmoB765
CmoCh12G001020	Cla022057	Watermelon (97103) v1	cmowmB135
CmoCh12G001020	Csa6G401320	Cucumber (Chinese Long) v2	cmocuB180
CmoCh12G001020	MELO3C011387	Melon (DHL92) v3.5.1	cmomeB147
CmoCh12G001020	ClCG08G010740	Watermelon (Charleston Gray)	cmowcgB162
CmoCh12G001020	CSPI06G20760	Wild cucumber (PI 183967)	cmocpiB184
CmoCh12G001020	Cp4.1LG11g04100	Cucurbita pepo (Zucchini)	cmocpeB148
CmoCh12G001020	Cp4.1LG07g01060	Cucurbita pepo (Zucchini)	cmocpeB174
CmoCh12G001020	MELO3C011387.2	Melon (DHL92) v3.6.1	cmomedB162
CmoCh12G001020	CsaV3_6G035800	Cucumber (Chinese Long) v3	cmocucB0214
CmoCh12G001020	Cla97C08G153640	Watermelon (97103) v2	cmowmbB179
CmoCh12G001020	CsGy6G020110	Cucumber (Gy14) v2	cgybcmoB704
CmoCh12G001020	Carg20562	Silver-seed gourd	carcmoB0893
CmoCh12G001020	Carg09243	Silver-seed gourd	carcmoB0194

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G001020	CmoCh05G004920	Cucurbita moschata (Rifu)	cmocmoB150

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G001020	Bottle gourd (USVL1VR-Ls)	cmolsiB176
CmoCh12G001020	Wax gourd	cmowgoB0194
CmoCh12G001020	Wax gourd	cmowgoB0211