CmoCh05G004920 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G004920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Nudix hydrolase
Location	Cmo_Chr05 : 2320314 .. 2322648 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGTCAGAAGGGAAGCAGATCAACTCAAAGGCCCAGGAATTTTTGGTGGGAGATATTTAGTGGACTTCCAGGAGGATCTTGACCCATTACGGTGGCTGGTAGATATGCGTACAAGCGAACTTCAGGGTAACTGGAGAGCTATTTTCTCACTGAGTAAAAAGTTTCTTGGAATGAAGTTTTGAAAGCTGTTTTTGGTTTTGGCTGGAAAGAAATGCTATAGATTTTGCAGGGACAAGAGAAGTGGAAGATAGTAAGATTTAATGATTTTCTTTGCTGCTCTTAAATCTTCTGTGCTTATTACAACTCCTTTTTGATCCACACAAGTTGGAGGTTTTTTTTAGACTCCCTTACTTATAGGATGTTTTGGTTTAGCCGTTTTACCTCATTTTGAATATCAGAGAGTACTTCTTGCGAAACTTCTATATTTACATTTAACATGGCTTGTATTGCATAGAAAGTTCACCTAACTGTGGTTATTTGATTGTCATTCTTCCTTCCTTTATTTATTTATTTCTGTCATAAATTAGTTTATATGTCCAACTTATTGTATAGTAGTTTTATCTGTGTAAACTATCTGTAGATTGTTTAATGTTTTAGCTAACTCATGCAATAAGGTCAATTGAGATTACTTGCATTATTTGCTAAGCATGCCTGCTTAGGTTACTACAATGGTCATATTCCTTCTGTATTTCCCTGGACTAGGGGTGAGGGTGAATGCCTCGTTATCCCCTTTTTTCTTCATCTTTCTGTTTTATTTGCTGAAATTATTTCTTAGAAAGTTGCATATCCAATAGCATTATCTTATGATGTGAGTTGCATATCCAATAGCATTATCTTAAGACAGAATCCTCCAACCATATGATTAATGGATATAAAAGATGACTCAACATTTGGAGGTCAAAGTAGAACTTCTTATGACTTTACCTGGTTTCATTTAATGTTATAATGTTTCAAATGTTTTGTTGTTTTATGTTAATTGAACGTCCAAATTAGATAATTATAAGAATGAATAAGCTTGGTCATGTTCTTTTCTGTTATATCTACACTTCTTTGTGATTGGGTAATGTTGCATTACTGTTAGGATTGTTTGGAGTTGTCTTACCATGGATGTGTGTGGCTGGGGAATTGTTTGGTTTCTGTTCTTTGGAGAATGTCGTGGTCTCTTATCTCTTGCTGTTTAGCAGTTTCTTTGTTCATTGGCTTGTTTATGAAAAAAAAAAACAAAAAAACAAAAAAAACTCTTTATGGTGTAATGTTGAGTTTGCTTCCCCTTTAGATTCAAGCCTGCGGAACTTGAAAAATATATTTTCTCTTGAATCCTTTTCTTTTTTTCTTTTTTTCTCCTATTCTTTCCTCTCGAGATGAGGAGGTAATCCAAACGGGCTAAAGGCCAGGCCATAGGAGGGGCAAGAGGGTGTCCCCCATGCCTAAGGGATATCAAACAAAAGGCTTGAGGGTGTCCCCCATGCCTAAGGGATATCAAACACAAAAGGGTTTTCAATCGGTTGATAACATAAGTGCAGTTGTTAAAGTTGTCAAAGGTGATGTGTGAAGCAAAATAAGATCTGCGGCTTAAAAGTTCATAAATGAAACACGTCTATTAGATTGAGGTTTTCACACTTAGGGCAATTACGTCTCTAAGGAGACGCACTGCTGCTTTCTCGTTTCTTTGTTGTTTTTGCATTTGTTTTCCTCCCATTTAGATTATAGCCTGACACAAACTCTCTGGTTGAAATCTCGGTTTTCAGGGATTCTTGGGAGACTACCACTTCAAGAGTAAAACACAGCAAGATGAGTTTACTCCAGACGGATTATGTCGAGCAGCTATGTACGCTTTATTTGTGAACGAGGAGCTCGAGTCATGGCCGGAGCAGAACACGAGAAACAGAAGTTGGGTGACCATACCTGAGGCAATTGAAAACTGCAGGCACGCATGGATGAGGGATGCCCTTGTCAATGGCTTCAACAAATGGCATGCAGAAAACATGAGCGATGAATAACTTGAATCTTGAAATGTATGCACATTACGAAGTATATGGTGCATATGAACAAAGTTGTCTTTATGGATTGTTTTTTAGAGTCCCTTTTTCCCCTTCGCCACCAAATCAAATCAAATCAAATCATGAAGAAATCAAGCAGTAGAACACTAACACTGATGATATGATGTTCAAGGATTACATACGCAACGTTTTGGTTGCTCATTTATTATAATACACTTCCGCTCTCGTTCAAGCTTCCTTGAAAGCTTTTACAAATGTATTTCGAATTTTCTTGTTCATTTATTACAAGTCTGATGAATTACATGCCATTTTTCAATATGATGGTATATTT

mRNA sequence

ATGCCGGTCAGAAGGGAAGCAGATCAACTCAAAGGCCCAGGAATTTTTGGTGGGAGATATTTAGTGGACTTCCAGGAGGATCTTGACCCATTACGGTGGCTGGTAGATATGCGTACAAGCGAACTTCAGGCTAACTCATGCAATAAGGGATTCTTGGGAGACTACCACTTCAAGAGTAAAACACAGCAAGATGAGTTTACTCCAGACGGATTATGTCGAGCAGCTATGTACGCTTTATTTGTGAACGAGGAGCTCGAGTCATGGCCGGAGCAGAACACGAGAAACAGAAGTTGGGTGACCATACCTGAGGCAATTGAAAACTGCAGGCACGCATGGATGAGGGATGCCCTTGTCAATGGCTTCAACAAATGGCATGCAGAAAACATGAGCGATGAATAACTTGAATCTTGAAATGTATGCACATTACGAAGTATATGGTGCATATGAACAAAGTTGTCTTTATGGATTGTTTTTTAGAGTCCCTTTTTCCCCTTCGCCACCAAATCAAATCAAATCAAATCATGAAGAAATCAAGCAGTAGAACACTAACACTGATGATATGATGTTCAAGGATTACATACGCAACGTTTTGGTTGCTCATTTATTATAATACACTTCCGCTCTCGTTCAAGCTTCCTTGAAAGCTTTTACAAATGTATTTCGAATTTTCTTGTTCATTTATTACAAGTCTGATGAATTACATGCCATTTTTCAATATGATGGTATATTT

Coding sequence (CDS)

ATGCCGGTCAGAAGGGAAGCAGATCAACTCAAAGGCCCAGGAATTTTTGGTGGGAGATATTTAGTGGACTTCCAGGAGGATCTTGACCCATTACGGTGGCTGGTAGATATGCGTACAAGCGAACTTCAGGCTAACTCATGCAATAAGGGATTCTTGGGAGACTACCACTTCAAGAGTAAAACACAGCAAGATGAGTTTACTCCAGACGGATTATGTCGAGCAGCTATGTACGCTTTATTTGTGAACGAGGAGCTCGAGTCATGGCCGGAGCAGAACACGAGAAACAGAAGTTGGGTGACCATACCTGAGGCAATTGAAAACTGCAGGCACGCATGGATGAGGGATGCCCTTGTCAATGGCTTCAACAAATGGCATGCAGAAAACATGAGCGATGAATAA

Homology

[Close]

BLAST of CmoCh05G004920 vs. Swiss-Prot
Match: NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-30
Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 1


Query: 51  FLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRH 110
           FLG+Y FKSK+ QDEF+P+GLC+AAMYAL+V EEL +WPE  TR R W+TI EA+E+CRH
Sbjct: 92  FLGNYEFKSKSHQDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRH 151

Query: 111 AWMRDALVNGFNKWHAENM 130
            WM+DALV GF KWH E M
Sbjct: 152 PWMKDALVEGFCKWHKEKM 170

[Close]

BLAST of CmoCh05G004920 vs. Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-12
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHA 111
           LG + F+SK+   E    G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ 
Sbjct: 97  LGVWEFRSKSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYE 156

Query: 112 WMRDAL 118
           WM+ AL
Sbjct: 157 WMQRAL 162

[Close]

BLAST of CmoCh05G004920 vs. Swiss-Prot
Match: NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-10
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTP--DGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 111
           LG + F+SK+   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR
Sbjct: 96  LGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCR 155

Query: 112 HAWMRDAL 118
           + WM+ AL
Sbjct: 156 YEWMQSAL 163

[Close]

BLAST of CmoCh05G004920 vs. Swiss-Prot
Match: NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHA 111
           LG + +KSK  +     DG     M+ L V+++ E WPE   R R WV++ EAIE C+++
Sbjct: 128 LGKWQYKSK--RHTMIHDG----HMFPLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNS 187

Query: 112 WMRDALVNGFNK 124
           WMR+AL    N+
Sbjct: 188 WMREALEAFINR 193

[Close]

BLAST of CmoCh05G004920 vs. Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.2e-08
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHA 111
           LG + +KSK  +     DG     M+AL V++E E WPE   R R WV++ EA E C++ 
Sbjct: 131 LGKWQYKSK--RHSIIHDGY----MFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNW 190

Query: 112 WMRDAL 118
           WMR+AL
Sbjct: 191 WMREAL 190

[Close]

BLAST of CmoCh05G004920 vs. TrEMBL
Match: A0A0A0KJ02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401320 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-39
Identity = 75/83 (90.36%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDYHFKSKTQQDEF+PDGLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CR
Sbjct: 43  GFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCR 102

Query: 110 HAWMRDALVNGFNKWHAENMSDE 133
           HAWM DALV GFNKWHAEN SDE
Sbjct: 103 HAWMTDALVIGFNKWHAENTSDE 125

[Close]

BLAST of CmoCh05G004920 vs. TrEMBL
Match: V4LY33_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021582mg PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDY FKSKT QDEF+P+GLC+AAMYAL+V EELE+WPEQ TR R+W+TI EA+E+CR
Sbjct: 91  GFLGDYEFKSKTHQDEFSPEGLCKAAMYALYVKEELETWPEQKTRTRTWLTIEEAVESCR 150

Query: 110 HAWMRDALVNGFNKWHAENM 130
           HAWM+DALV GF KWH E M
Sbjct: 151 HAWMKDALVEGFCKWHKEKM 170

[Close]

BLAST of CmoCh05G004920 vs. TrEMBL
Match: A5C8Z2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007719 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-31
Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 1


Query: 51  FLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRH 110
           FLG YHFKSKT QDEF+P+G C+AAM+ALFV EELESWPEQNTR RSW+TIPEA ENCRH
Sbjct: 307 FLGHYHFKSKTLQDEFSPEGSCKAAMFALFVKEELESWPEQNTRRRSWLTIPEAYENCRH 366

Query: 111 AWMRDALVNGFNKWHAENMS 131
            WMR+AL +GF+KWH   +S
Sbjct: 367 PWMREALKDGFSKWHENKIS 386

[Close]

BLAST of CmoCh05G004920 vs. TrEMBL
Match: F6HVD0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00690 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-31
Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 1


Query: 51  FLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRH 110
           FLG YHFKSKT QDEF+P+G C+AAM+ALFV EELESWPEQNTR RSW+TIPEA ENCRH
Sbjct: 108 FLGHYHFKSKTLQDEFSPEGSCKAAMFALFVKEELESWPEQNTRRRSWLTIPEAYENCRH 167

Query: 111 AWMRDALVNGFNKWHAENMS 131
            WMR+AL +GF+KWH   +S
Sbjct: 168 PWMREALKDGFSKWHENKIS 187

[Close]

BLAST of CmoCh05G004920 vs. TrEMBL
Match: M5X2H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012156mg PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-31
Identity = 59/79 (74.68%), Postives = 71/79 (89.87%), Query Frame = 1


Query: 51  FLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRH 110
           FLG YHFKSKT QDEF+P+G+CRAAM+ALFV EELESWPEQ+TRNR+W+T+ EA  +CRH
Sbjct: 92  FLGFYHFKSKTHQDEFSPEGVCRAAMFALFVKEELESWPEQSTRNRTWLTVAEAFVSCRH 151

Query: 111 AWMRDALVNGFNKWHAENM 130
           AWMR+AL +GF+KWHAE M
Sbjct: 152 AWMREALQDGFSKWHAEKM 170

[Close]

BLAST of CmoCh05G004920 vs. TAIR10
Match: AT3G12600.1 (AT3G12600.1 nudix hydrolase homolog 16)

HSP 1 Score: 131.7 bits (330), Expect = 3.3e-31
Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 1


Query: 51  FLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRH 110
           FLG+Y FKSK+ QDEF+P+GLC+AAMYAL+V EEL +WPE  TR R W+TI EA+E+CRH
Sbjct: 92  FLGNYEFKSKSHQDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRH 151

Query: 111 AWMRDALVNGFNKWHAENM 130
            WM+DALV GF KWH E M
Sbjct: 152 PWMKDALVEGFCKWHKEKM 170

[Close]

BLAST of CmoCh05G004920 vs. TAIR10
Match: AT1G12880.1 (AT1G12880.1 nudix hydrolase homolog 12)

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-13
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHA 111
           LG + F+SK+   E    G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ 
Sbjct: 97  LGVWEFRSKSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYE 156

Query: 112 WMRDAL 118
           WM+ AL
Sbjct: 157 WMQRAL 162

[Close]

BLAST of CmoCh05G004920 vs. TAIR10
Match: AT3G26690.1 (AT3G26690.1 nudix hydrolase homolog 13)

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTP--DGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 111
           LG + F+SK+   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR
Sbjct: 96  LGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCR 155

Query: 112 HAWMRDAL 118
           + WM+ AL
Sbjct: 156 YEWMQSAL 163

[Close]

BLAST of CmoCh05G004920 vs. TAIR10
Match: AT1G73540.1 (AT1G73540.1 nudix hydrolase homolog 21)

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHA 111
           LG + +KSK  +     DG     M+ L V+++ E WPE   R R WV++ EAIE C+++
Sbjct: 128 LGKWQYKSK--RHTMIHDG----HMFPLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNS 187

Query: 112 WMRDALVNGFNK 124
           WMR+AL    N+
Sbjct: 188 WMREALEAFINR 193

[Close]

BLAST of CmoCh05G004920 vs. TAIR10
Match: AT1G18300.1 (AT1G18300.1 nudix hydrolase homolog 4)

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-09
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1


Query: 52  LGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHA 111
           LG + +KSK  +     DG     M+AL V++E E WPE   R R WV++ EA E C++ 
Sbjct: 131 LGKWQYKSK--RHSIIHDGY----MFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNW 190

Query: 112 WMRDAL 118
           WMR+AL
Sbjct: 191 WMREAL 190

[Close]

BLAST of CmoCh05G004920 vs. NCBI nr
Match: gi|659089211|ref|XP_008445385.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X3 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDYHFKSKTQQDEF+PDGLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CR
Sbjct: 81  GFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCR 140

Query: 110 HAWMRDALVNGFNKWHAENMSDE 133
           HAWMRDAL  GFNKWHAEN+SDE
Sbjct: 141 HAWMRDALAIGFNKWHAENISDE 163

[Close]

BLAST of CmoCh05G004920 vs. NCBI nr
Match: gi|659089209|ref|XP_008445384.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDYHFKSKTQQDEF+PDGLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CR
Sbjct: 86  GFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCR 145

Query: 110 HAWMRDALVNGFNKWHAENMSDE 133
           HAWMRDAL  GFNKWHAEN+SDE
Sbjct: 146 HAWMRDALAIGFNKWHAENISDE 168

[Close]

BLAST of CmoCh05G004920 vs. NCBI nr
Match: gi|659089207|ref|XP_008445383.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDYHFKSKTQQDEF+PDGLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CR
Sbjct: 91  GFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCR 150

Query: 110 HAWMRDALVNGFNKWHAENMSDE 133
           HAWMRDAL  GFNKWHAEN+SDE
Sbjct: 151 HAWMRDALAIGFNKWHAENISDE 173

[Close]

BLAST of CmoCh05G004920 vs. NCBI nr
Match: gi|659089213|ref|XP_008445386.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X4 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDYHFKSKTQQDEF+PDGLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CR
Sbjct: 69  GFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCR 128

Query: 110 HAWMRDALVNGFNKWHAENMSDE 133
           HAWMRDAL  GFNKWHAEN+SDE
Sbjct: 129 HAWMRDALAIGFNKWHAENISDE 151

[Close]

BLAST of CmoCh05G004920 vs. NCBI nr
Match: gi|778715801|ref|XP_011657456.1| (PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-39
Identity = 75/83 (90.36%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 50  GFLGDYHFKSKTQQDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCR 109
           GFLGDYHFKSKTQQDEF+PDGLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CR
Sbjct: 81  GFLGDYHFKSKTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCR 140

Query: 110 HAWMRDALVNGFNKWHAENMSDE 133
           HAWM DALV GFNKWHAEN SDE
Sbjct: 141 HAWMTDALVIGFNKWHAENTSDE 163

The following BLAST results are available for this feature:

BLAST of CmoCh05G004920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NUD16_ARATH	5.8e-30	68.35	Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1	[more]
NUD12_ARATH	7.1e-12	48.48	Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1	[more]
NUD13_ARATH	3.9e-10	45.59	Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1	[more]
NUD21_ARATH	3.6e-08	40.28	Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1	[more]
NUDT4_ARATH	6.2e-08	43.94	Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1	[more]

BLAST of CmoCh05G004920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ02_CUCSA	4.8e-39	90.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401320 PE=4 SV=1	[more]
V4LY33_EUTSA	1.3e-31	75.00	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021582mg PE=4 SV=1	[more]
A5C8Z2_VITVI	4.8e-31	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007719 PE=4 SV=1	[more]
F6HVD0_VITVI	4.8e-31	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00690 PE=4 SV=...	[more]
M5X2H7_PRUPE	6.2e-31	74.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012156mg PE=4 SV=1	[more]

BLAST of CmoCh05G004920 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12600.1	3.3e-31	68.35	nudix hydrolase homolog 16	[more]
AT1G12880.1	4.0e-13	48.48	nudix hydrolase homolog 12	[more]
AT3G26690.1	2.2e-11	45.59	nudix hydrolase homolog 13	[more]
AT1G73540.1	2.1e-09	40.28	nudix hydrolase homolog 21	[more]
AT1G18300.1	3.5e-09	43.94	nudix hydrolase homolog 4	[more]

BLAST of CmoCh05G004920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089211\|ref\|XP_008445385.1\|	2.3e-39	90.36	PREDICTED: nudix hydrolase 16, mitochondrial isoform X3 [Cucumis melo]	[more]
gi\|659089209\|ref\|XP_008445384.1\|	2.3e-39	90.36	PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Cucumis melo]	[more]
gi\|659089207\|ref\|XP_008445383.1\|	2.3e-39	90.36	PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo]	[more]
gi\|659089213\|ref\|XP_008445386.1\|	2.3e-39	90.36	PREDICTED: nudix hydrolase 16, mitochondrial isoform X4 [Cucumis melo]	[more]
gi\|778715801\|ref\|XP_011657456.1\|	6.8e-39	90.36	PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G004920.1	CmoCh05G004920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 51..125 score: 2.9
None	No IPR available	PANTHER	PTHR12629:SF9	NUDIX HYDROLASE 16, MITOCHONDRIAL	coord: 51..125 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G004920	Cucsa.005110	Cucumber (Gy14) v1	cgycmoB0092
CmoCh05G004920	CmaCh12G001260	Cucurbita maxima (Rimu)	cmacmoB192
CmoCh05G004920	CmaCh05G004690	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G004920	Cla022057	Watermelon (97103) v1	cmowmB746
CmoCh05G004920	Csa6G401320	Cucumber (Chinese Long) v2	cmocuB800
CmoCh05G004920	MELO3C011387	Melon (DHL92) v3.5.1	cmomeB715
CmoCh05G004920	ClCG08G010740	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G004920	CSPI06G20760	Wild cucumber (PI 183967)	cmocpiB805
CmoCh05G004920	Lsi08G009280	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G004920	Cp4.1LG11g04100	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G004920	Cp4.1LG07g01060	Cucurbita pepo (Zucchini)	cmocpeB744
CmoCh05G004920	MELO3C011387.2	Melon (DHL92) v3.6.1	cmomedB812
CmoCh05G004920	CsaV3_6G035800	Cucumber (Chinese Long) v3	cmocucB0943
CmoCh05G004920	Cla97C08G153640	Watermelon (97103) v2	cmowmbB800
CmoCh05G004920	CsGy6G020110	Cucumber (Gy14) v2	cgybcmoB830
CmoCh05G004920	Carg20562	Silver-seed gourd	carcmoB0894
CmoCh05G004920	Carg09243	Silver-seed gourd	carcmoB0196

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G004920	CmoCh12G001020	Cucurbita moschata (Rifu)	cmocmoB150

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G004920	Wax gourd	cmowgoB0951