Carg20562 (gene) Silver-seed gourd

Overview
NameCarg20562
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNudix hydrolase 16, mitochondrial
LocationCucurbita_argyrosperma_scaffold_113 : 345047 .. 347658 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATATTCCCACCATTATTTTTTAAGATTCGTAGACTCCAGCTATTTAATGTTTGTATGTTTATGTTCTTCCTTGCTTCGAAGTCGTTTTCGTTGACCATCTTTGTCGAAGTTTTGTGAAAACTGAGGCCGCCATTGTCATTTTTTTTACTACGTAATAGATATTGACTGCTTTGGTTTTCACTGTTGTTCTTGTTTCGGTATTGGTGTTTTTTTGATTCGTTGGTCGGTTCTTTAATCGATTAGGAACTCTGTGGTTGTTTTCGGTTTAAACTACATTCCTACAGGTCTGCATAAATTGGAGTTCTTCTTTATTTTTAATGATCTGTGTATCGAGACCTGAGTGCTGAAGTTCTGCCAGATTATTGATTTGTGGTTGGGTATCCAGAATGTTAATCTGTCACGAAAGTACTTTGGTGACACATTGCATTAATGAATCCGTCTTAGTAGGATTTAGGTCAGTTTCAGGAAGGAAAGGGGAAACTAATTTGATCGTGAATCTATGTATTCTTTCGCTCTGCTGATCTTACCTCATTCACCTCGGTAAAGCAGCTTGATCGATAGGGAGAGATGGTCGATCTTTCTTTTCTTACTCAGGGTGCTTCATCTCCTTTGCAGCGTGGTTAATTGTGGTGAATGGATGGACAGATGATGGTTGGGTTGGCACCATCTGGAAAGATGATGTCCTTTTGTCTGTCATAACTAGCAGCGACAGATTATGATAGCAGATTCATGACTTTTGATATTAGTGCATTGGCTTTGTCTGAAGTCAATCACATCCTTGATGACTTGATGGAAAGTTGGCCATCTATATTCCTTCCATAAAGCTATCAATAATTTCTTCCCTCTTCATCCAGTCTTTGATGATTCAAGCGACGTGAGAAAAAAATACGACTAAATCTGCATAAATGGAATAACATCATGATCTTTGAGCACACTCAGTTGCATCATTCTCTTTTATACTTCTTTCAATGACTTCTTGTAGTTAATAAGAGATGGCTCATTTTAAATTTATCTCTATGGCCCTTCTGCATTGCATTTTATACATCCGGGCTGCTTGTGTTTTATGTTTTATTTAAACTAATGAAATGCAGTTGAATCAAATGATTGATCAATCAATGTGGTGGCAGATATAGTTTATGAATGCCTTTCTATTCTTTTGTAGGTGTATTCCTTTTAGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGCCTTTTGTTCCCGAAGGTGTGAAGTTGTTTCCCTCTCATTTCTGCCTTTCTGCTTCTCTCATATGAAGAAAGTATATGAGCTTATTTTATCTCTAACCATCAGCATTTTCTCTAAAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGTGAACTTATGGTGAAATAGTACTTTAAATGCTTGAATTGTTTTTTCTCATTTCCTTTTGTGAAAATTGAAGGCTGTTTCATCCAACGTATATATATGATTGGAAGAGGAGTGCTCAGGAGTGTTGAGGGGTGTATCATTTTTAGTAGCTTTCTGTAGGACTACGCAATGAGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGTAGATATGCATGAATGACACTTCGGAGAGACTAGGGAGAGCTCCAAACTGGGGAAATATATGAAAGAATAAGCTTAGTCATGTTGTTTTGATGTTATATCTGCATTAATTTGTCGTTGGTTAACATATGTGAGATCCCATATTGGTTGGTTGGAGAGGGGAACGAAGCATTCTTATAAGGGTGTTGAAACCTCTCCCTAGCTATGAGGCTGATGGCAATATGTAACGAGCCAAAGCAGACAATATCGGTTAGCGATGAGTTGTTACAAATGGTATTAGAGCCAGACACCGAGTGGTGTGCCAGTGAGGATGCTGGTCCCCAAGGAGGAGTTGGGTTGTGAGATCCTACATTGATTGGAGAGGAGAACGAACATTTCTTGTAAGGGTATGGAAACCTCTTCCTAGCATTTTAAAACTTGAGGCTGACCTTGATACCTAACGGGACAAAGTGGGTAATATTTGCTAGCGGTTGGTGTAGGATGTTATTGAATGTTGCATTTTTTGATAGAATAGTTTACTGCCTTTCTTGTTTATGTCCGTATGTTCGTTTGTTTATCCTCTTGGAGACCGACACGAAGAAGTGGCCAGCTTGTAAAATCTGTTGGCTTTGTTCAGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGACTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA

mRNA sequence

ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGACTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA

Coding sequence (CDS)

ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGACTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA

Protein sequence

MSDLVARTGRQQQRYDAGCRLIAGKTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Homology
[Close]
BLAST of Carg20562 vs. NCBI nr
Match: XP_022951082.1 (nudix hydrolase 16, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_023002070.1 nudix hydrolase 16, mitochondrial-like [Cucurbita maxima] >XP_023002071.1 nudix hydrolase 16, mitochondrial-like [Cucurbita maxima] >XP_023002072.1 nudix hydrolase 16, mitochondrial-like [Cucurbita maxima] >XP_023537745.1 nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-41
Identity = 98/174 (56.32%), Postives = 98/174 (56.32%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           MSDLVARTGRQQQRYDAGCRLIAG                                    
Sbjct: 1   MSDLVARTGRQQQRYDAGCRLIAGCIPFRYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60

Query: 61  ----------------------------------------KTQQDEFSPEGLCRAAMYAL 99
                                                   KTQQDEFSPEGLCRAAMYAL
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRGELMGFLGIYHFKSKTQQDEFSPEGLCRAAMYAL 120

[Close]
BLAST of Carg20562 vs. NCBI nr
Match: XP_022951081.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 25  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 84
           KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI
Sbjct: 102 KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 161

Query: 85  GFNKWHAQHMNDES 99
           GFNKWHAQHMNDES
Sbjct: 162 GFNKWHAQHMNDES 175

[Close]
BLAST of Carg20562 vs. NCBI nr
Match: XP_023537746.1 (nudix hydrolase 16, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 25  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 84
           KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI
Sbjct: 91  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 150

Query: 85  GFNKWHAQHMNDES 99
           GFNKWHAQHMNDES
Sbjct: 151 GFNKWHAQHMNDES 164

[Close]
BLAST of Carg20562 vs. NCBI nr
Match: XP_022132288.1 (nudix hydrolase 16, mitochondrial isoform X1 [Momordica charantia] >XP_022132289.1 nudix hydrolase 16, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 2.4e-37
Identity = 88/170 (51.76%), Postives = 94/170 (55.29%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           MSDLVARTGR QQRYDAGCRLIAG                                    
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDDESSDKVVEVLMIDTPSGPGLLFPKG 60

Query: 61  -------------------------------------KTQQDEFSPEGLCRAAMYALFVN 98
                                                KTQQDEFSP+GLCRAAMYALFVN
Sbjct: 61  GWENDETVEEAAVREAIEEAGVRGELMGFLGDYHFKSKTQQDEFSPDGLCRAAMYALFVN 120

[Close]
BLAST of Carg20562 vs. NCBI nr
Match: XP_022961746.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 162.9 bits (411), Expect = 5.4e-37
Identity = 89/173 (51.45%), Postives = 95/173 (54.91%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           MSDLVARTGR QQRYDAGCRLIAG                                    
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61  ----------------------------------------KTQQDEFSPEGLCRAAMYAL 98
                                                   KTQQDEF+P+GLCRAAMYAL
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRGQLMGFLGDYHFKSKTQQDEFTPDGLCRAAMYAL 120

[Close]
BLAST of Carg20562 vs. TAIR10
Match: AT3G12600.1 (nudix hydrolase homolog 16)

HSP 1 Score: 117.1 bits (292), Expect = 6.2e-27
Identity = 67/170 (39.41%), Postives = 77/170 (45.29%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           M DLVARTGR QQRY+ G RL+AG                                    
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61  ----------------------------------------KTQQDEFSPEGLCRAAMYAL 95
                                                   K+ QDEFSPEGLC+AAMYAL
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGILMDFLGNYEFKSKSHQDEFSPEGLCKAAMYAL 120

[Close]
BLAST of Carg20562 vs. TAIR10
Match: AT1G12880.1 (nudix hydrolase homolog 12)

HSP 1 Score: 64.3 bits (155), Expect = 4.7e-11
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 35  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 83
           G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Sbjct: 115 GGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRAL 162

[Close]
BLAST of Carg20562 vs. TAIR10
Match: AT3G26690.1 (nudix hydrolase homolog 13)

HSP 1 Score: 61.6 bits (148), Expect = 3.1e-10
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 35  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 83
           G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 116 GGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

[Close]
BLAST of Carg20562 vs. TAIR10
Match: AT1G73540.1 (nudix hydrolase homolog 21)

HSP 1 Score: 57.0 bits (136), Expect = 7.6e-09
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 41  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNK 89
           M+ L V+++ E WPE   R R WV++ EAIE C+++WMR+AL    N+
Sbjct: 146 MFPLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMREALEAFINR 193

[Close]
BLAST of Carg20562 vs. TAIR10
Match: AT2G01670.1 (nudix hydrolase homolog 17)

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-08
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 41  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 83
           M+ + V E+LE WPEQ+ R R W+ + EA E+CR  WM++AL
Sbjct: 113 MFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEAL 154

[Close]
BLAST of Carg20562 vs. Swiss-Prot
Match: sp|Q9LHK1|NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25
Identity = 67/170 (39.41%), Postives = 77/170 (45.29%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           M DLVARTGR QQRY+ G RL+AG                                    
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61  ----------------------------------------KTQQDEFSPEGLCRAAMYAL 95
                                                   K+ QDEFSPEGLC+AAMYAL
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGILMDFLGNYEFKSKSHQDEFSPEGLCKAAMYAL 120

[Close]
BLAST of Carg20562 vs. Swiss-Prot
Match: sp|Q93ZY7|NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.6e-10
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 35  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 83
           G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Sbjct: 115 GGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRAL 162

[Close]
BLAST of Carg20562 vs. Swiss-Prot
Match: sp|Q52K88|NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.5e-09
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 35  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 83
           G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 116 GGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

[Close]
BLAST of Carg20562 vs. Swiss-Prot
Match: sp|Q8VY81|NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 41  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNK 89
           M+ L V+++ E WPE   R R WV++ EAIE C+++WMR+AL    N+
Sbjct: 146 MFPLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMREALEAFINR 193

[Close]
BLAST of Carg20562 vs. Swiss-Prot
Match: sp|Q9ZU95|NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-07
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 41  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 83
           M+ + V E+LE WPEQ+ R R W+ + EA E+CR  WM++AL
Sbjct: 113 MFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEAL 154

[Close]
BLAST of Carg20562 vs. TrEMBL
Match: tr|A0A1S3BDF1|A0A1S3BDF1_CUCME (nudix hydrolase 16, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488433 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.6e-35
Identity = 86/173 (49.71%), Postives = 91/173 (52.60%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           MSDLVARTGR QQRYDAGCRLIAG                                    
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61  ----------------------------------------KTQQDEFSPEGLCRAAMYAL 98
                                                   KTQQDEFSP+GLCRAAMYAL
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRGELMGFLGDYHFKSKTQQDEFSPDGLCRAAMYAL 120

[Close]
BLAST of Carg20562 vs. TrEMBL
Match: tr|A0A1S3BC41|A0A1S3BC41_CUCME (nudix hydrolase 16, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488433 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0 

Query: 25  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 84
           KTQQDEFSP+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWMRDAL I
Sbjct: 91  KTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMRDALAI 150

Query: 85  GFNKWHAQHMNDE 98
           GFNKWHA++++DE
Sbjct: 151 GFNKWHAENISDE 163

[Close]
BLAST of Carg20562 vs. TrEMBL
Match: tr|A0A1S3BCK6|A0A1S3BCK6_CUCME (nudix hydrolase 16, mitochondrial isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488433 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0 

Query: 25  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 84
           KTQQDEFSP+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWMRDAL I
Sbjct: 79  KTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMRDALAI 138

Query: 85  GFNKWHAQHMNDE 98
           GFNKWHA++++DE
Sbjct: 139 GFNKWHAENISDE 151

[Close]
BLAST of Carg20562 vs. TrEMBL
Match: tr|A0A0A0KJ02|A0A0A0KJ02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401320 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-31
Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 0 

Query: 25  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVI 84
           KTQQDEFSP+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWM DALVI
Sbjct: 53  KTQQDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMTDALVI 112

Query: 85  GFNKWHAQHMNDE 98
           GFNKWHA++ +DE
Sbjct: 113 GFNKWHAENTSDE 125

[Close]
BLAST of Carg20562 vs. TrEMBL
Match: tr|A0A218X1W6|A0A218X1W6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr016185 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.0e-28
Identity = 73/173 (42.20%), Postives = 86/173 (49.71%), Query Frame = 0 

Query: 1   MSDLVARTGRQQQRYDAGCRLIAG------------------------------------ 60
           M DLVARTGR QQRY+AGCRL+AG                                    
Sbjct: 1   MCDLVARTGRHQQRYEAGCRLVAGCIPYRYRSVDCGDSTDEKIIEVLMINSTSGPGLLFP 60

Query: 61  ---------------------------------------KTQQDEFSPEGLCRAAMYALF 99
                                                  KT QDEF PEGLC+AAM+AL 
Sbjct: 61  KGGWENDETVDEAAIREAIEEAGVKGDIKGLLGHYDFKSKTHQDEFCPEGLCKAAMFALL 120

The following BLAST results are available for this feature:
BLAST of Carg20562 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951082.11.2e-4156.32nudix hydrolase 16, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_02300... [more]
XP_022951081.11.4e-37100.00nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata][more]
XP_023537746.11.4e-37100.00nudix hydrolase 16, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022132288.12.4e-3751.76nudix hydrolase 16, mitochondrial isoform X1 [Momordica charantia] >XP_022132289... [more]
XP_022961746.15.4e-3751.45nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata][more]
BLAST of Carg20562 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12600.16.2e-2739.41nudix hydrolase homolog 16[more]
AT1G12880.14.7e-1154.17nudix hydrolase homolog 12[more]
AT3G26690.13.1e-1052.08nudix hydrolase homolog 13[more]
AT1G73540.17.6e-0945.83nudix hydrolase homolog 21[more]
AT2G01670.12.9e-0850.00nudix hydrolase homolog 17[more]
BLAST of Carg20562 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LHK1|NUD16_ARATH1.1e-2539.41Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2... [more]
sp|Q93ZY7|NUD12_ARATH8.6e-1054.17Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2... [more]
sp|Q52K88|NUD13_ARATH5.5e-0952.08Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1... [more]
sp|Q8VY81|NUD21_ARATH1.4e-0745.83Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2... [more]
sp|Q9ZU95|NUD17_ARATH5.2e-0750.00Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2... [more]
BLAST of Carg20562 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BDF1|A0A1S3BDF1_CUCME2.6e-3549.71nudix hydrolase 16, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
tr|A0A1S3BC41|A0A1S3BC41_CUCME1.0e-3186.30nudix hydrolase 16, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
tr|A0A1S3BCK6|A0A1S3BCK6_CUCME1.0e-3186.30nudix hydrolase 16, mitochondrial isoform X3 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
tr|A0A0A0KJ02|A0A0A0KJ02_CUCSA2.9e-3186.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401320 PE=4 SV=1[more]
tr|A0A218X1W6|A0A218X1W6_PUNGR4.0e-2842.20Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr016185 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20562-RACarg20562-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.90.79.10coord: 6..80
e-value: 5.8E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR12629:SF34SUBFAMILY NOT NAMEDcoord: 25..95
coord: 1..24
NoneNo IPR availablePANTHERPTHR12629DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASEcoord: 25..95
coord: 1..24