CmoCh11G007700 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAATAAAAAGATCACCATTTTGGACGAAACCCTAAAATAGAGGATTCATCAACGTCCCCAGTCGAGGGTTTCGAGCGGGAACCTCAGCACGAGTTGGAAGTGTATACTGCAACGAAGAGAAGCTTATCCGGATACCTAATCGGCGTCGGAATCCGGTGGTATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCGTTTTCTATCTCTGTCTTTTGTTTTCAGTTCGATTTGTAAATTTTTTATCATCTTCTCGATTGGCTTTAAATTTATAATTGTACGTTTGGATTGAGAAATCTATTGTCTTATTCTTGTTGGATTGAACGTTTGTGTTCCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGGTACTTGTTATTTACTAGATGTAAATTGTTTGCTTTTGTTGTTTCTTATATTCTTGGCCCTGTTTGAATGTGCCTTCAGAAAACTTCTTATTACTGCTTTGGATAGATCTTCGAATACTTCTTATATAATGCATTGGACGTGGACCTTGAAGCTTTTGATTTTTAAACCTGTGTTTTTCTTTCATTCACATGTTTAATCTTCTAGCAATTCGTTATTGTTCGATTTACAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGTATGTTTTTCTTTGAAATTTCTTTGCATATTGTGAAGAATGTAATTCATTTACTTGTTCATTAATTTTAATTTTGAGGGCTTTGTGCGAGATGTGAATAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGGTATGTGTTAACTCTTTTGTACTTCAACAACCTTTAAGTTTCATTAATGTTGTTTCGTTTCAAGATGTCTATGTCCTTGTCAATTTGATTGATCTGCAAGAAGAAACGATTAGGTTGCTCATTTTCTTAACAAATTGAATTGTGCTGTGTACACTACGTTGTTCTTTTATGAATTTTTTAAGACAAAATTAAGCTTTCATTCAGATCAATGAAAGCATGCCGAACAACGTTATCCTAGGAGGAGCTAGAAATCTGTACTAGGGTAAAACCACATCAAATTTAATGGCCTCAATTTTTAACTATTATTCCAAGGTCAATGTCTTGAGACTAACTGAAGAAGTAATCCTAAGGAAATTTTTTAGAGTTGATTTTATTTCGAACAAAAACACTGCCACCGAGCATGTTTACACTTTAGCTCATGCTTTTTCTTATTCTTTTCCATCTTGCCCCTTCAAGACCCCTTTTTAATATGTTGTTTCAGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGGTATGCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACGTTTTTCATTAGCCCTTAAATTTTAGTTTTTTGAGAGCATTCTCGTTCGAAATTTATGACTACTTCGATCTTATCCATGTGTAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTACTTGGGAACTGCAAAGCAGAAACTTGTTTGTTTGCAGTCTTCGGTACTATCTTGATAGTCTTTAGGATATATTTATAGTTTCATAACCACGAGTGAAAAAAATTCTCTCAAGACATATTGAGGAGTTTGGAGGGAAGTTTCCCGGGATGCCTTGGTTCGAGCCTCCATGTGGTAAACCTTATAAGTGAATATCTTTTTCTCACTTGTTATGTTTCCTAGAGTAGTTGGCTTTATGTTGCACAAAGTCTCCCTGCAGTATTGGAGTGGGCCACAGCTGATACAAAAAATAAATGATTTGGGATTTGCAGACCCATTTTATATATAGATCACCCTCTGTTTGGCTGTTCCTAATATGAACATATGATGCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGTATGAATAAATAAATAAAACTGGTATTGCTGTAATTTTCAATAATGTTCACTTGTATGTGGCTTGCCGTTGCTGCACTCCTAATGTTTCGGTTGGTGATCGGTGTCATAATTTTTGTTCTCTGCTGTTAACTATACCATAAATCCTATTCCAAGTAACCTTGCATTGTCTATTTCCTGTCTGACATGCTATAGAGGATGCCTACCCATCACCCCAATTCTTGTCGTTTTCGAGTTTTTGCTTCAATCGATACTTTGTAGCACTATATGTTCAATATCCCGTGTTAATATTCTAAATTTTACGTCGGCATGTTACAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAATTAACTCACGTACCGGTAACTAATGTCGTTACTTTTGTTCATTTCATATTTGTTCTTGTCGTTTCATTTGGGGATTACTGTGAGGTTGCTTCTATATTTTCGTCCAATTTTCCAACTAATGACAGAGGAAGAATAGATTACCCTTTAGGGTAGTTAGTCTGATTTTGATGTTTATATCTGTACTTTAATCATGCCATTTCATAACGGTCATAATATCATAGAAATTGCCAAGGCAAGGTGCCCTTATATGGTGGCGCATAAGGTGGCACGCCTAATTTTGAAGCGTTTCGCTTTGAATAATTATGATCTTTTTGGGCGGTGTAGACGTGAGTTCATATCATATGTGCATGATTGACATGTCTTGTTTTGTAAAGTACTCGGGGAGGTGTAGAAGTGTTTTTTTTCCCTCGGGAAGTTGATAATGTTTTCTTGAAGTTTGAGGGATGTCGATAACTCTTTAAATGCAC AAATAAATAAAAAGATCACCATTTTGGACGAAACCCTAAAATAGAGGATTCATCAACGTCCCCAGTCGAGGGTTTCGAGCGGGAACCTCAGCACGAGTTGGAAGTGTATACTGCAACGAAGAGAAGCTTATCCGGATACCTAATCGGCGTCGGAATCCGGTGGTATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAATTAACTCACGTACCGGTAACTAATGTCGTTACTTTTGTTCATTTCATATTTGTTCTTGTCGTTTCATTTGGGGATTACTGTGAGGTTGCTTCTATATTTTCGTCCAATTTTCCAACTAATGACAGAGGAAGAATAGATTACCCTTTAGGGTAGTTAGTCTGATTTTGATGTTTATATCTGTACTTTAATCATGCCATTTCATAACGGTCATAATATCATAGAAATTGCCAAGGCAAGGTGCCCTTATATGGTGGCGCATAAGGTGGCACGCCTAATTTTGAAGCGTTTCGCTTTGAATAATTATGATCTTTTTGGGCGGTGTAGACGTGAGTTCATATCATATGTGCATGATTGACATGTCTTGTTTTGTAAAGTACTCGGGGAGGTGTAGAAGTGTTTTTTTTCCCTCGGGAAGTTGATAATGTTTTCTTGAAGTTTGAGGGATGTCGATAACTCTTTAAATGCAC ATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAA
BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_ARATH (Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana GN=TIF3K1 PE=2 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.0e-97 Identity = 176/234 (75.21%), Postives = 208/234 (88.89%), Query Frame = 1
BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_ORYSJ (Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica GN=TIF3K1 PE=2 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.2e-96 Identity = 166/217 (76.50%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_BOVIN (Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus GN=EIF3K PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27 Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 1
BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_MOUSE (Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus GN=Eif3k PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 1
BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_HUMAN (Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens GN=EIF3K PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 1
BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A0A0LZ54_CUCSA (Eukaryotic translation initiation factor 3 subunit K OS=Cucumis sativus GN=Csa_1G597810 PE=3 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 4.2e-123 Identity = 228/234 (97.44%), Postives = 230/234 (98.29%), Query Frame = 1
BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A061GKY7_THECC (Eukaryotic translation initiation factor 3 subunit K OS=Theobroma cacao GN=TCM_037462 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 5.7e-112 Identity = 204/237 (86.08%), Postives = 223/237 (94.09%), Query Frame = 1
BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A0D2RTQ2_GOSRA (Eukaryotic translation initiation factor 3 subunit K OS=Gossypium raimondii GN=B456_009G038100 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-111 Identity = 204/232 (87.93%), Postives = 220/232 (94.83%), Query Frame = 1
BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A067KCM1_JATCU (Eukaryotic translation initiation factor 3 subunit K OS=Jatropha curcas GN=JCGZ_07547 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 3.7e-111 Identity = 205/237 (86.50%), Postives = 223/237 (94.09%), Query Frame = 1
BLAST of CmoCh11G007700 vs. TrEMBL
Match: D7TC95_VITVI (Eukaryotic translation initiation factor 3 subunit K OS=Vitis vinifera GN=VIT_11s0016g00450 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 7.0e-110 Identity = 201/229 (87.77%), Postives = 218/229 (95.20%), Query Frame = 1
BLAST of CmoCh11G007700 vs. TAIR10
Match: AT4G33250.1 (AT4G33250.1 eukaryotic translation initiation factor 3K) HSP 1 Score: 356.7 bits (914), Expect = 1.1e-98 Identity = 176/234 (75.21%), Postives = 208/234 (88.89%), Query Frame = 1
BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|659100187|ref|XP_008450972.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Cucumis melo]) HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-123 Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 1
BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|449452616|ref|XP_004144055.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Cucumis sativus]) HSP 1 Score: 448.7 bits (1153), Expect = 6.1e-123 Identity = 228/234 (97.44%), Postives = 230/234 (98.29%), Query Frame = 1
BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|590574922|ref|XP_007012542.1| (Eukaryotic translation initiation factor 3 subunit K isoform 1 [Theobroma cacao]) HSP 1 Score: 411.8 bits (1057), Expect = 8.2e-112 Identity = 204/237 (86.08%), Postives = 223/237 (94.09%), Query Frame = 1
BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|823227383|ref|XP_012446517.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Gossypium raimondii]) HSP 1 Score: 410.6 bits (1054), Expect = 1.8e-111 Identity = 204/232 (87.93%), Postives = 220/232 (94.83%), Query Frame = 1
BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|802628621|ref|XP_012077127.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Jatropha curcas]) HSP 1 Score: 409.1 bits (1050), Expect = 5.3e-111 Identity = 205/237 (86.50%), Postives = 223/237 (94.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |