CmoCh11G007700 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G007700
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEukaryotic translation initiation factor 3 subunit 11 family protein
LocationCmo_Chr11 : 3762072 .. 3765690 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAAATAAAAAGATCACCATTTTGGACGAAACCCTAAAATAGAGGATTCATCAACGTCCCCAGTCGAGGGTTTCGAGCGGGAACCTCAGCACGAGTTGGAAGTGTATACTGCAACGAAGAGAAGCTTATCCGGATACCTAATCGGCGTCGGAATCCGGTGGTATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCGTTTTCTATCTCTGTCTTTTGTTTTCAGTTCGATTTGTAAATTTTTTATCATCTTCTCGATTGGCTTTAAATTTATAATTGTACGTTTGGATTGAGAAATCTATTGTCTTATTCTTGTTGGATTGAACGTTTGTGTTCCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGGTACTTGTTATTTACTAGATGTAAATTGTTTGCTTTTGTTGTTTCTTATATTCTTGGCCCTGTTTGAATGTGCCTTCAGAAAACTTCTTATTACTGCTTTGGATAGATCTTCGAATACTTCTTATATAATGCATTGGACGTGGACCTTGAAGCTTTTGATTTTTAAACCTGTGTTTTTCTTTCATTCACATGTTTAATCTTCTAGCAATTCGTTATTGTTCGATTTACAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGTATGTTTTTCTTTGAAATTTCTTTGCATATTGTGAAGAATGTAATTCATTTACTTGTTCATTAATTTTAATTTTGAGGGCTTTGTGCGAGATGTGAATAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGGTATGTGTTAACTCTTTTGTACTTCAACAACCTTTAAGTTTCATTAATGTTGTTTCGTTTCAAGATGTCTATGTCCTTGTCAATTTGATTGATCTGCAAGAAGAAACGATTAGGTTGCTCATTTTCTTAACAAATTGAATTGTGCTGTGTACACTACGTTGTTCTTTTATGAATTTTTTAAGACAAAATTAAGCTTTCATTCAGATCAATGAAAGCATGCCGAACAACGTTATCCTAGGAGGAGCTAGAAATCTGTACTAGGGTAAAACCACATCAAATTTAATGGCCTCAATTTTTAACTATTATTCCAAGGTCAATGTCTTGAGACTAACTGAAGAAGTAATCCTAAGGAAATTTTTTAGAGTTGATTTTATTTCGAACAAAAACACTGCCACCGAGCATGTTTACACTTTAGCTCATGCTTTTTCTTATTCTTTTCCATCTTGCCCCTTCAAGACCCCTTTTTAATATGTTGTTTCAGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGGTATGCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACGTTTTTCATTAGCCCTTAAATTTTAGTTTTTTGAGAGCATTCTCGTTCGAAATTTATGACTACTTCGATCTTATCCATGTGTAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTACTTGGGAACTGCAAAGCAGAAACTTGTTTGTTTGCAGTCTTCGGTACTATCTTGATAGTCTTTAGGATATATTTATAGTTTCATAACCACGAGTGAAAAAAATTCTCTCAAGACATATTGAGGAGTTTGGAGGGAAGTTTCCCGGGATGCCTTGGTTCGAGCCTCCATGTGGTAAACCTTATAAGTGAATATCTTTTTCTCACTTGTTATGTTTCCTAGAGTAGTTGGCTTTATGTTGCACAAAGTCTCCCTGCAGTATTGGAGTGGGCCACAGCTGATACAAAAAATAAATGATTTGGGATTTGCAGACCCATTTTATATATAGATCACCCTCTGTTTGGCTGTTCCTAATATGAACATATGATGCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGTATGAATAAATAAATAAAACTGGTATTGCTGTAATTTTCAATAATGTTCACTTGTATGTGGCTTGCCGTTGCTGCACTCCTAATGTTTCGGTTGGTGATCGGTGTCATAATTTTTGTTCTCTGCTGTTAACTATACCATAAATCCTATTCCAAGTAACCTTGCATTGTCTATTTCCTGTCTGACATGCTATAGAGGATGCCTACCCATCACCCCAATTCTTGTCGTTTTCGAGTTTTTGCTTCAATCGATACTTTGTAGCACTATATGTTCAATATCCCGTGTTAATATTCTAAATTTTACGTCGGCATGTTACAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAATTAACTCACGTACCGGTAACTAATGTCGTTACTTTTGTTCATTTCATATTTGTTCTTGTCGTTTCATTTGGGGATTACTGTGAGGTTGCTTCTATATTTTCGTCCAATTTTCCAACTAATGACAGAGGAAGAATAGATTACCCTTTAGGGTAGTTAGTCTGATTTTGATGTTTATATCTGTACTTTAATCATGCCATTTCATAACGGTCATAATATCATAGAAATTGCCAAGGCAAGGTGCCCTTATATGGTGGCGCATAAGGTGGCACGCCTAATTTTGAAGCGTTTCGCTTTGAATAATTATGATCTTTTTGGGCGGTGTAGACGTGAGTTCATATCATATGTGCATGATTGACATGTCTTGTTTTGTAAAGTACTCGGGGAGGTGTAGAAGTGTTTTTTTTCCCTCGGGAAGTTGATAATGTTTTCTTGAAGTTTGAGGGATGTCGATAACTCTTTAAATGCAC

mRNA sequence

AAATAAATAAAAAGATCACCATTTTGGACGAAACCCTAAAATAGAGGATTCATCAACGTCCCCAGTCGAGGGTTTCGAGCGGGAACCTCAGCACGAGTTGGAAGTGTATACTGCAACGAAGAGAAGCTTATCCGGATACCTAATCGGCGTCGGAATCCGGTGGTATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAATTAACTCACGTACCGGTAACTAATGTCGTTACTTTTGTTCATTTCATATTTGTTCTTGTCGTTTCATTTGGGGATTACTGTGAGGTTGCTTCTATATTTTCGTCCAATTTTCCAACTAATGACAGAGGAAGAATAGATTACCCTTTAGGGTAGTTAGTCTGATTTTGATGTTTATATCTGTACTTTAATCATGCCATTTCATAACGGTCATAATATCATAGAAATTGCCAAGGCAAGGTGCCCTTATATGGTGGCGCATAAGGTGGCACGCCTAATTTTGAAGCGTTTCGCTTTGAATAATTATGATCTTTTTGGGCGGTGTAGACGTGAGTTCATATCATATGTGCATGATTGACATGTCTTGTTTTGTAAAGTACTCGGGGAGGTGTAGAAGTGTTTTTTTTCCCTCGGGAAGTTGATAATGTTTTCTTGAAGTTTGAGGGATGTCGATAACTCTTTAAATGCAC

Coding sequence (CDS)

ATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAA
BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_ARATH (Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana GN=TIF3K1 PE=2 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-97
Identity = 176/234 (75.21%), Postives = 208/234 (88.89%), Query Frame = 1

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MG E+Q  PQ++ +  VEQL+A+NP+NP+ILPDLENYVN  V+S+TYSL+ NLCLLRLYQ
Sbjct: 1   MGVEIQS-PQEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERM+T IVARILVKALMA+P PDFSLCLFLIPERVQME+QFK+LI+LSHYLETG+F+
Sbjct: 61  FEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQ 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHI+EAVPGFEQAIQAYA H+LSL+YQKVPRSVLAEA+N++G SLDKF+E 
Sbjct: 121 QFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQ 180

Query: 181 QVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           QV NSGWI+EK     +G  IV+P NEFNHPELKK + +++PLEHI RIFPILG
Sbjct: 181 QVTNSGWIVEK-----EGGSIVLPQNEFNHPELKKNTGENVPLEHIARIFPILG 226

BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_ORYSJ (Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica GN=TIF3K1 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-96
Identity = 166/217 (76.50%), Postives = 199/217 (91.71%), Query Frame = 1

Query: 17  VEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILV 76
           VE+L+AVNPYNPDIL DLE +VN+QVS++TY+LDANL LLRLYQFEPER+S QIV+RIL+
Sbjct: 12  VEELVAVNPYNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPERLSVQIVSRILI 71

Query: 77  KALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAV 136
           KALMA+P PDFSLCLFLIPE VQME+QFKTLI+LSHYLET +FRQFWDEA+KNR+I++ V
Sbjct: 72  KALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWDEASKNRNILDVV 131

Query: 137 PGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGKGHG 196
           PGFEQAIQ+YA+HVLSLTYQKVPR VLAEAINIEGL+LDKFLEH +ANSGW++EKG    
Sbjct: 132 PGFEQAIQSYAIHVLSLTYQKVPRPVLAEAINIEGLALDKFLEHHIANSGWVIEKG---A 191

Query: 197 KGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPIL 234
           + QLIV+P NEFNHPELKK +++++P EH+TRIFP+L
Sbjct: 192 RSQLIVLPRNEFNHPELKKNTAETVPFEHVTRIFPVL 225

BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_BOVIN (Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus GN=EIF3K PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 1

Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDSQLKVWMSKYGWSA 184

Query: 190 EKGKGHGKGQLIVIPPNEFNHPE--LKKKSSDSI 222
           ++      GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE-----SGQIFICSQEESIKPKNIVEKIDFDSV 210

BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_MOUSE (Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus GN=Eif3k PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 1

Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDNQLKVWMSKYGWSA 184

Query: 190 EKGKGHGKGQLIVIPPNEFNHPE--LKKKSSDSI 222
           ++      GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE-----SGQVFICSQEESIKPKNIVEKIDFDSV 210

BLAST of CmoCh11G007700 vs. Swiss-Prot
Match: EIF3K_HUMAN (Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens GN=EIF3K PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 1

Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGWSA 184

Query: 190 EKGKGHGKGQLIVIPPNEFNHPE--LKKKSSDSI 222
           ++      GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE-----SGQIFICSQEESIKPKNIVEKIDFDSV 210

BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A0A0LZ54_CUCSA (Eukaryotic translation initiation factor 3 subunit K OS=Cucumis sativus GN=Csa_1G597810 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.2e-123
Identity = 228/234 (97.44%), Postives = 230/234 (98.29%), Query Frame = 1

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           QVANSGW LEKG   GKGQLIVIPPNEFNHPELKKKSSDSIPL+HITRIFPILG
Sbjct: 181 QVANSGWTLEKG---GKGQLIVIPPNEFNHPELKKKSSDSIPLDHITRIFPILG 231

BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A061GKY7_THECC (Eukaryotic translation initiation factor 3 subunit K OS=Theobroma cacao GN=TCM_037462 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.7e-112
Identity = 204/237 (86.08%), Postives = 223/237 (94.09%), Query Frame = 1

Query: 1   MGREL---QKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLR 60
           MGRE    Q+Q QQ+++  VEQL+AVNPYNPDILPDLENYVNEQVSS+TYSLDANLCLLR
Sbjct: 1   MGRETPKQQQQQQQQVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 61  LYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETG 120
           LYQFEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLETG
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120

Query: 121 KFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKF 180
           +FRQFWDEAAK+RHIVEAVPGFEQAIQ YA+HVLSLTYQK+PR VLAEAINIEGLSLDKF
Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQTYAIHVLSLTYQKIPRPVLAEAINIEGLSLDKF 180

Query: 181 LEHQVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           LEHQ ANSGWILE  KGHG+GQLI++P NEFNHPELKK ++DS+PLEHITRIFPILG
Sbjct: 181 LEHQAANSGWILE--KGHGRGQLIILPRNEFNHPELKKSAADSVPLEHITRIFPILG 235

BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A0D2RTQ2_GOSRA (Eukaryotic translation initiation factor 3 subunit K OS=Gossypium raimondii GN=B456_009G038100 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-111
Identity = 204/232 (87.93%), Postives = 220/232 (94.83%), Query Frame = 1

Query: 3   RELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFE 62
           RE  KQ QQ+++  VEQL+AVNPYNPDILPDLENYVNEQVSS+TYSLDANLCLLRLYQFE
Sbjct: 5   RETPKQ-QQQVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFE 64

Query: 63  PERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQF 122
           PERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLETG+FRQF
Sbjct: 65  PERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQF 124

Query: 123 WDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQV 182
           WDEAAKNRHIVEAVPGFEQAIQ YA+HVLSLTYQK+PR VLAEAINIEGLSLDKFLEHQ 
Sbjct: 125 WDEAAKNRHIVEAVPGFEQAIQTYAIHVLSLTYQKIPRPVLAEAINIEGLSLDKFLEHQA 184

Query: 183 ANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           ANSGWILE  KGHG+GQLIV+P NEFNHPELKK ++DS+PLEHITRIFPILG
Sbjct: 185 ANSGWILE--KGHGRGQLIVLPRNEFNHPELKKSAADSVPLEHITRIFPILG 233

BLAST of CmoCh11G007700 vs. TrEMBL
Match: A0A067KCM1_JATCU (Eukaryotic translation initiation factor 3 subunit K OS=Jatropha curcas GN=JCGZ_07547 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.7e-111
Identity = 205/237 (86.50%), Postives = 223/237 (94.09%), Query Frame = 1

Query: 1   MGRELQKQP---QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLR 60
           MGRE + Q    QQ+++  VEQL+AVNPYNPDILPDLENYVNEQVSS+TYSLDANLCLLR
Sbjct: 1   MGREREPQKLQQQQQVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 61  LYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETG 120
           LYQFEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLETG
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120

Query: 121 KFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKF 180
           +FRQFWDEAAK+RHIVEAVPGFEQAIQAYA+H+LSLTYQKVPRSVLAEAINIEGLSLDKF
Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQAYAIHLLSLTYQKVPRSVLAEAINIEGLSLDKF 180

Query: 181 LEHQVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           LE QVAN GWI+E  KGHG+GQLIV+P NEFNHPELKK ++DSIPLEHITRIFPILG
Sbjct: 181 LEQQVANGGWIIE--KGHGRGQLIVLPGNEFNHPELKKNAADSIPLEHITRIFPILG 235

BLAST of CmoCh11G007700 vs. TrEMBL
Match: D7TC95_VITVI (Eukaryotic translation initiation factor 3 subunit K OS=Vitis vinifera GN=VIT_11s0016g00450 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 7.0e-110
Identity = 201/229 (87.77%), Postives = 218/229 (95.20%), Query Frame = 1

Query: 6   QKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPER 65
           ++QPQQ+    VEQLLA+NPYNPDILPDLEN+VNEQVSS+TYSLDANLCLLRLYQFEPER
Sbjct: 5   KQQPQQQYT--VEQLLALNPYNPDILPDLENFVNEQVSSQTYSLDANLCLLRLYQFEPER 64

Query: 66  MSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDE 125
           MSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLET +FRQFWDE
Sbjct: 65  MSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFWDE 124

Query: 126 AAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANS 185
           AAKNRHIVE VPGFEQAIQAYA+HVLSLTYQKVPR+VLAEAINIEGLSLDKFLEHQVAN 
Sbjct: 125 AAKNRHIVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVANC 184

Query: 186 GWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           GW+LEK +  GKGQLIV+PPNEFNHPELKK ++DSIPLEHITRIFPILG
Sbjct: 185 GWVLEKSQ--GKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPILG 229

BLAST of CmoCh11G007700 vs. TAIR10
Match: AT4G33250.1 (AT4G33250.1 eukaryotic translation initiation factor 3K)

HSP 1 Score: 356.7 bits (914), Expect = 1.1e-98
Identity = 176/234 (75.21%), Postives = 208/234 (88.89%), Query Frame = 1

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MG E+Q  PQ++ +  VEQL+A+NP+NP+ILPDLENYVN  V+S+TYSL+ NLCLLRLYQ
Sbjct: 1   MGVEIQS-PQEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERM+T IVARILVKALMA+P PDFSLCLFLIPERVQME+QFK+LI+LSHYLETG+F+
Sbjct: 61  FEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQ 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHI+EAVPGFEQAIQAYA H+LSL+YQKVPRSVLAEA+N++G SLDKF+E 
Sbjct: 121 QFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQ 180

Query: 181 QVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           QV NSGWI+EK     +G  IV+P NEFNHPELKK + +++PLEHI RIFPILG
Sbjct: 181 QVTNSGWIVEK-----EGGSIVLPQNEFNHPELKKNTGENVPLEHIARIFPILG 226

BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|659100187|ref|XP_008450972.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-123
Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 1

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           QVANSGWILEKG   GKGQLIVIPPNEFNHPELKKKSSDSIPL+HITRIFPILG
Sbjct: 181 QVANSGWILEKG---GKGQLIVIPPNEFNHPELKKKSSDSIPLDHITRIFPILG 231

BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|449452616|ref|XP_004144055.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Cucumis sativus])

HSP 1 Score: 448.7 bits (1153), Expect = 6.1e-123
Identity = 228/234 (97.44%), Postives = 230/234 (98.29%), Query Frame = 1

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           QVANSGW LEKG   GKGQLIVIPPNEFNHPELKKKSSDSIPL+HITRIFPILG
Sbjct: 181 QVANSGWTLEKG---GKGQLIVIPPNEFNHPELKKKSSDSIPLDHITRIFPILG 231

BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|590574922|ref|XP_007012542.1| (Eukaryotic translation initiation factor 3 subunit K isoform 1 [Theobroma cacao])

HSP 1 Score: 411.8 bits (1057), Expect = 8.2e-112
Identity = 204/237 (86.08%), Postives = 223/237 (94.09%), Query Frame = 1

Query: 1   MGREL---QKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLR 60
           MGRE    Q+Q QQ+++  VEQL+AVNPYNPDILPDLENYVNEQVSS+TYSLDANLCLLR
Sbjct: 1   MGRETPKQQQQQQQQVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 61  LYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETG 120
           LYQFEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLETG
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120

Query: 121 KFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKF 180
           +FRQFWDEAAK+RHIVEAVPGFEQAIQ YA+HVLSLTYQK+PR VLAEAINIEGLSLDKF
Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQTYAIHVLSLTYQKIPRPVLAEAINIEGLSLDKF 180

Query: 181 LEHQVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           LEHQ ANSGWILE  KGHG+GQLI++P NEFNHPELKK ++DS+PLEHITRIFPILG
Sbjct: 181 LEHQAANSGWILE--KGHGRGQLIILPRNEFNHPELKKSAADSVPLEHITRIFPILG 235

BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|823227383|ref|XP_012446517.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Gossypium raimondii])

HSP 1 Score: 410.6 bits (1054), Expect = 1.8e-111
Identity = 204/232 (87.93%), Postives = 220/232 (94.83%), Query Frame = 1

Query: 3   RELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFE 62
           RE  KQ QQ+++  VEQL+AVNPYNPDILPDLENYVNEQVSS+TYSLDANLCLLRLYQFE
Sbjct: 5   RETPKQ-QQQVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFE 64

Query: 63  PERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQF 122
           PERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLETG+FRQF
Sbjct: 65  PERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQF 124

Query: 123 WDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQV 182
           WDEAAKNRHIVEAVPGFEQAIQ YA+HVLSLTYQK+PR VLAEAINIEGLSLDKFLEHQ 
Sbjct: 125 WDEAAKNRHIVEAVPGFEQAIQTYAIHVLSLTYQKIPRPVLAEAINIEGLSLDKFLEHQA 184

Query: 183 ANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           ANSGWILE  KGHG+GQLIV+P NEFNHPELKK ++DS+PLEHITRIFPILG
Sbjct: 185 ANSGWILE--KGHGRGQLIVLPRNEFNHPELKKSAADSVPLEHITRIFPILG 233

BLAST of CmoCh11G007700 vs. NCBI nr
Match: gi|802628621|ref|XP_012077127.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit K [Jatropha curcas])

HSP 1 Score: 409.1 bits (1050), Expect = 5.3e-111
Identity = 205/237 (86.50%), Postives = 223/237 (94.09%), Query Frame = 1

Query: 1   MGRELQKQP---QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLR 60
           MGRE + Q    QQ+++  VEQL+AVNPYNPDILPDLENYVNEQVSS+TYSLDANLCLLR
Sbjct: 1   MGREREPQKLQQQQQVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 61  LYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETG 120
           LYQFEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQME+QFKTLI+LSHYLETG
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120

Query: 121 KFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKF 180
           +FRQFWDEAAK+RHIVEAVPGFEQAIQAYA+H+LSLTYQKVPRSVLAEAINIEGLSLDKF
Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQAYAIHLLSLTYQKVPRSVLAEAINIEGLSLDKF 180

Query: 181 LEHQVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 235
           LE QVAN GWI+E  KGHG+GQLIV+P NEFNHPELKK ++DSIPLEHITRIFPILG
Sbjct: 181 LEQQVANGGWIIE--KGHGRGQLIVLPGNEFNHPELKKNAADSIPLEHITRIFPILG 235

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
EIF3K_ARATH2.0e-9775.21Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana GN=... [more]
EIF3K_ORYSJ2.2e-9676.50Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japo... [more]
EIF3K_BOVIN1.3e-2733.18Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus GN=EIF3K PE=2... [more]
EIF3K_MOUSE1.6e-2733.18Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus GN=Eif3k PE... [more]
EIF3K_HUMAN1.6e-2733.18Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens GN=EIF3K PE... [more]
Match NameE-valueIdentityDescription
A0A0A0LZ54_CUCSA4.2e-12397.44Eukaryotic translation initiation factor 3 subunit K OS=Cucumis sativus GN=Csa_1... [more]
A0A061GKY7_THECC5.7e-11286.08Eukaryotic translation initiation factor 3 subunit K OS=Theobroma cacao GN=TCM_0... [more]
A0A0D2RTQ2_GOSRA1.3e-11187.93Eukaryotic translation initiation factor 3 subunit K OS=Gossypium raimondii GN=B... [more]
A0A067KCM1_JATCU3.7e-11186.50Eukaryotic translation initiation factor 3 subunit K OS=Jatropha curcas GN=JCGZ_... [more]
D7TC95_VITVI7.0e-11087.77Eukaryotic translation initiation factor 3 subunit K OS=Vitis vinifera GN=VIT_11... [more]
Match NameE-valueIdentityDescription
AT4G33250.11.1e-9875.21 eukaryotic translation initiation factor 3K[more]
Match NameE-valueIdentityDescription
gi|659100187|ref|XP_008450972.1|1.6e-12397.86PREDICTED: eukaryotic translation initiation factor 3 subunit K [Cucumis melo][more]
gi|449452616|ref|XP_004144055.1|6.1e-12397.44PREDICTED: eukaryotic translation initiation factor 3 subunit K [Cucumis sativus... [more]
gi|590574922|ref|XP_007012542.1|8.2e-11286.08Eukaryotic translation initiation factor 3 subunit K isoform 1 [Theobroma cacao][more]
gi|823227383|ref|XP_012446517.1|1.8e-11187.93PREDICTED: eukaryotic translation initiation factor 3 subunit K [Gossypium raimo... [more]
gi|802628621|ref|XP_012077127.1|5.3e-11186.50PREDICTED: eukaryotic translation initiation factor 3 subunit K [Jatropha curcas... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009374eIF3k
IPR011991Winged helix-turn-helix DNA-binding domain
IPR016020Transl_init_fac_sub12_N_euk
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0043022ribosome binding
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006446regulation of translational initiation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005488 binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G007700.1CmoCh11G007700.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009374Eukaryotic translation initiation factor 3 subunit KHAMAPMF_03010eIF3kcoord: 8..234
score: 24
IPR009374Eukaryotic translation initiation factor 3 subunit KPANTHERPTHR13022EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11coord: 1..233
score: 1.7E
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 128..232
score: 5.5
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 137..231
score: 2.18
IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticGENE3DG3DSA:1.25.40.250coord: 8..125
score: 7.1
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 10..135
score: 1.09
NoneNo IPR availablePANTHERPTHR13022:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Kcoord: 1..233
score: 1.7E