Carg12930 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTACCTTATCGGCGGTGGAATCCGGTGGCATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAACAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTTGAAAACTACGTAAACGAGCAGGTTTCTTTCCATCTGTATCATATGTTGTCAGTTCAATTTGTGTAAAATGCAATAATCTCCTCGATTGTGTTTACATCTGTAATCGTACGTCAGAACTGAGAGAACTCTGATCTTATTTTAGTTAGATAGATTGAACGTTTGTGTTACAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGCCTTCTTCGCCTCTACCAGGTAACTATACTACTAATCTACTAGCTGCTAATGGATTTACTTCTTTTACTACTTATATTGTTCGTCTTGTTTGAAAGTGTCATCTGAGAAACTTGTATTAGTCAAATTTTCAGAAAAAAAGTTAGGCTCTAAATTGATCGTGGTTCTTGTTTAGGGATAGGTTTGCCATTTAATCCTTAAGTTTCCATTGATGTTTTATTTATTTATTTTTGGTTCACTGTCATTTACTTTAAGAAAAATTAGAATGCATTCTGGTGCTGATGGCCTTGTAACTTAAACTTTTGATTGTTTAGCCTCTGTGTTTTCCGATCGATTCATATGGTTTATATTCTAGCAAATTAATTGTTGCTTGATTTACAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGTGTGTTTTCCTTCTAAATTTCTTTGATCTCACATATTGTGAAGAATTAAATTCAATACGTTCTTCATTCAGCTTAATTTTGAAGTTTCTGTGTGATTTGTGAATAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGGTATGCGTTAACTCTTTCGTATTTCACTGCTTTATTTTAAGATGCTTATGTCATTTTAATTCCAGAACAAATGGTATGTGTTTACCCTATTGTAGTTCACCATCCCTTAAGTTTCATTACTAATTTTATTTAGAGATCTCTATGTCCTAGTAAATTTGATTGATCTGTAGAGCAAACAATTGGGGTGTCATTTCTTGTTTAGAGATCCCTTAAGTTTGATTACTAACATTGCTGCTGAGTATTTTCACATTATTTGCTGTCATTTCTTGTGCTAAATCTTGTTTAGAGATCCCTTAATGACACATTTTATACATATTATTATCAGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGGTATGCAAGTTTCTTTACGTTTTTCTTCTTTGAATCCCTTAATTTTAATCTTTAGAAGCATGCTCATGCAAAAGTTCTGACTATTTTGATCTTATTTACGTGTAGACTGGAAAGTTTCGTCAATTCTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTACGTAGGAACTATAAGGCAGAAATTTGTTTGTTTGAGCGACTCTAGAGAATGCATTTGACTGACCTGAAGAAGAATTGAGATGGGTTTTCAACTTGCTTGCTTTGTTTCTAGACCAAGCCCTGTTTAGCTGTTCCTGATATGAAAATACGATACAGGTTTTGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGCTCCTAGATCTGTGCTTGCGGAGGTATGGTTTATAAAATGTCTGCCATTTTAGTAATCTTGGAGTTGGTACTTCAACCATCATTGTTGTCTTTTTTTCATTCGAGTTTCGGTGTATATGCGACTTGACAATGATATCCTGCTAATGTTCTGGTTGATAATTTACGTTGTGATTTATCTTTTCTGCCGTCGTTAGTGATGACGTAAATCCTACTCCAAACAACCTTGTTTATTTTCTGTCTGACAATCAAGGATACGAACCCGTCAACCCGAATTCATGTCATTTTGGAGTTCTTTGCTTCGATCAATACTTTTTAATGCTCTATGTTTAACACTCTGTGTGTGTCTACTCCAAACAACCTTGTTTATTTTCCGTCTGACATGTTATCAAGGATGTGAACCCGTCATCCCAACTTCATGTCATCTTGGAGTTCTTTGCTTCAATCAATACTTTTTAATGCTTATGTTTAATACTCTGTGTGTATCTACTCCAAACAACCTTGTTTATTTTCTGTCTGACATGCTATCAAGGATACAAACCCGTCAACCCGAATTCATGTCGTCTTGGAGTTCTTTGCTTCGATCAATACTTTTTAATGCTCTATGTTTAATACTCTGTGTGTATCTACTCCAAACAACCTTGTTTATTTTCTGTCTGACATGTTATCAAGGATGCGAACCTGTCAACCCGAATTCATGTCGTGTTGGAGTTCTTTGCTTCGATCAATACTTTTCTTAATTTTCTATGTTTAATACTCTGTGTGTATTTAAATCTAATGTGGCATGTCACAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGC GTACCTTATCGGCGGTGGAATCCGGTGGCATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAACAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTTGAAAACTACGTAAACGAGCAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGCCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTTCGTCAATTCTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTTTTGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGCTCCTAGATCTGTGCTTGCGGAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGC ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAACAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTTGAAAACTACGTAAACGAGCAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGCCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTTCGTCAATTCTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTTTTGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGCTCCTAGATCTGTGCTTGCGGAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGC MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKAPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
BLAST of Carg12930 vs. NCBI nr
Match: XP_023516999.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 460.3 bits (1183), Expect = 3.9e-126 Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0
BLAST of Carg12930 vs. NCBI nr
Match: XP_022961240.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita moschata]) HSP 1 Score: 459.9 bits (1182), Expect = 5.1e-126 Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0
BLAST of Carg12930 vs. NCBI nr
Match: XP_023530808.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456.1 bits (1172), Expect = 7.3e-125 Identity = 228/232 (98.28%), Postives = 231/232 (99.57%), Query Frame = 0
BLAST of Carg12930 vs. NCBI nr
Match: XP_022147729.1 (eukaryotic translation initiation factor 3 subunit K [Momordica charantia]) HSP 1 Score: 455.7 bits (1171), Expect = 9.6e-125 Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0
BLAST of Carg12930 vs. NCBI nr
Match: XP_022988293.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita maxima]) HSP 1 Score: 454.1 bits (1167), Expect = 2.8e-124 Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0
BLAST of Carg12930 vs. TAIR10
Match: AT4G33250.1 (eukaryotic translation initiation factor 3K) HSP 1 Score: 354.8 bits (909), Expect = 4.2e-98 Identity = 174/232 (75.00%), Postives = 207/232 (89.22%), Query Frame = 0
BLAST of Carg12930 vs. Swiss-Prot
Match: sp|Q9SZA3|EIF3K_ARATH (Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana OX=3702 GN=TIF3K1 PE=2 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 7.5e-97 Identity = 174/232 (75.00%), Postives = 207/232 (89.22%), Query Frame = 0
BLAST of Carg12930 vs. Swiss-Prot
Match: sp|Q94HF1|EIF3K_ORYSJ (Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica OX=39947 GN=TIF3K1 PE=2 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.7e-96 Identity = 166/215 (77.21%), Postives = 198/215 (92.09%), Query Frame = 0
BLAST of Carg12930 vs. Swiss-Prot
Match: sp|Q3T0V3|EIF3K_BOVIN (Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus OX=9913 GN=EIF3K PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 71/212 (33.49%), Postives = 114/212 (53.77%), Query Frame = 0
BLAST of Carg12930 vs. Swiss-Prot
Match: sp|Q9UBQ5|EIF3K_HUMAN (Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens OX=9606 GN=EIF3K PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27 Identity = 71/212 (33.49%), Postives = 114/212 (53.77%), Query Frame = 0
BLAST of Carg12930 vs. Swiss-Prot
Match: sp|Q9DBZ5|EIF3K_MOUSE (Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN=Eif3k PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27 Identity = 71/212 (33.49%), Postives = 114/212 (53.77%), Query Frame = 0
BLAST of Carg12930 vs. TrEMBL
Match: tr|A0A1S3BRJ0|A0A1S3BRJ0_CUCME (Eukaryotic translation initiation factor 3 subunit K OS=Cucumis melo OX=3656 GN=LOC103492400 PE=3 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 7.7e-123 Identity = 227/232 (97.84%), Postives = 230/232 (99.14%), Query Frame = 0
BLAST of Carg12930 vs. TrEMBL
Match: tr|A0A0A0LZ54|A0A0A0LZ54_CUCSA (Eukaryotic translation initiation factor 3 subunit K OS=Cucumis sativus OX=3659 GN=Csa_1G597810 PE=3 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 2.9e-122 Identity = 226/232 (97.41%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of Carg12930 vs. TrEMBL
Match: tr|A0A1U8PGB6|A0A1U8PGB6_GOSHI (Eukaryotic translation initiation factor 3 subunit K OS=Gossypium hirsutum OX=3635 GN=LOC107958825 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.7e-112 Identity = 203/230 (88.26%), Postives = 219/230 (95.22%), Query Frame = 0
BLAST of Carg12930 vs. TrEMBL
Match: tr|A0A0D2RTQ2|A0A0D2RTQ2_GOSRA (Eukaryotic translation initiation factor 3 subunit K OS=Gossypium raimondii OX=29730 GN=B456_009G038100 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.7e-112 Identity = 203/230 (88.26%), Postives = 219/230 (95.22%), Query Frame = 0
BLAST of Carg12930 vs. TrEMBL
Match: tr|A0A067KCM1|A0A067KCM1_JATCU (Eukaryotic translation initiation factor 3 subunit K OS=Jatropha curcas OX=180498 GN=JCGZ_07547 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 1.0e-111 Identity = 203/235 (86.38%), Postives = 222/235 (94.47%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |