CmoCh08G002200 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G002200
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING/U-box superfamily protein, putative
LocationCmo_Chr08 : 1323529 .. 1324617 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTGGTCGTCGGAGAATTACGCTTTACGATCAGATGTTAGCGGTGGGCGACGGCAGAGAGCTCACTGGTGGTTTGACACTGAACGACGTTTTGACTGTTCATAAGAGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGGGACGACGTTGGGAAGTCCCCTGCTGTTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGGGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGGAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAGTTCGACGCGGTTAAGTCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGACACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCGCTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCTCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCCGCTAGAGAAACGGTGGCGACACAAGAGGCAGCCGACGCAGAAACCACCGCCGACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTAAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGATTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAAGAAGAAGTCGCCGTCGTGGGCGGCGGGTCGGAACGGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

mRNA sequence

ATGGAAGGTGGTCGTCGGAGAATTACGCTTTACGATCAGATGTTAGCGGTGGGCGACGGCAGAGAGCTCACTGGTGGTTTGACACTGAACGACGTTTTGACTGTTCATAAGAGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGGGACGACGTTGGGAAGTCCCCTGCTGTTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGGGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGGAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAGTTCGACGCGGTTAAGTCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGACACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCGCTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCTCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCCGCTAGAGAAACGGTGGCGACACAAGAGGCAGCCGACGCAGAAACCACCGCCGACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTAAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGATTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAAGAAGAAGTCGCCGTCGTGGGCGGCGGGTCGGAACGGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

Coding sequence (CDS)

ATGGAAGGTGGTCGTCGGAGAATTACGCTTTACGATCAGATGTTAGCGGTGGGCGACGGCAGAGAGCTCACTGGTGGTTTGACACTGAACGACGTTTTGACTGTTCATAAGAGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGGGACGACGTTGGGAAGTCCCCTGCTGTTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGGGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGGAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAGTTCGACGCGGTTAAGTCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGACACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCGCTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCTCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCCGCTAGAGAAACGGTGGCGACACAAGAGGCAGCCGACGCAGAAACCACCGCCGACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTAAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGATTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAAGAAGAAGTCGCCGTCGTGGGCGGCGGGTCGGAACGGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA
Homology
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BLAST of CmoCh08G002200 vs. TrEMBL
Match: A0A0A0K6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.3e-127
Identity = 263/366 (71.86%), Postives = 288/366 (78.69%), Query Frame = 1 

Query: 1   MEGGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60
           MEGGRRRITLYDQMLAV DGR+L GG TLNDVL + KRA P+ SP VRL+GRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTP 120
           DVGKSP V NRER SWKF RDRLRL++RSQIPP NSLRF   +SAEM SN+E SPE TT 
Sbjct: 61  DVGKSP-VSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTT 120

Query: 121 VVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRP 180
              +A P LRQISRR+STRL+ ++  S EATNS  SP+NN   S  A +GS   RSLLRP
Sbjct: 121 AAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNN---SAAAASGS-GGRSLLRP 180

Query: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTR LSAALA ERSMSARE V  QEAADAE T 
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV 240

Query: 241 DEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKE 300
           DE++++ +  A  T APVRMSLMDLLEETDRQMGFEGS Y+IED      E+EEEE E E
Sbjct: 241 DEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIED------EDEEEEIENE 300

Query: 301 EEVAVVG----GGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFIL 360
               V G    GG+E  CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFIL
Sbjct: 301 VSTTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIL 355

Query: 361 EILDIF 363
           EILDIF
Sbjct: 361 EILDIF 355

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BLAST of CmoCh08G002200 vs. TrEMBL
Match: W9SC41_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.9e-72
Identity = 204/407 (50.12%), Postives = 245/407 (60.20%), Query Frame = 1 

Query: 3   GGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLN-------GRTLL 62
           G  RRITL DQM A+ DG +L+G LTL+D+L   KRA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLSG-LTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DILRDDVGKSPA----VGNRERKSWKFLRDRLRL-----------------------NLR 122
           DI+RD+  K+ +    VGNR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQISRRSSTRLSQNIPTSP 182
           SQ+   +S R +  S+ EM   E+ S +   P ++        +SRRSS R S N   + 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS--------LSRRSSCRFSPNALFAS 190

Query: 183 EATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEP---V 242
           +   S +   NNN++++ A      +   LRPQ+SRR+STR S    +S TD TEP   +
Sbjct: 191 DPALSDDGSNNNNNNNSGAPPAQVPT---LRPQISRRHSTRFSPVIEDSVTDPTEPPPPM 250

Query: 243 HEGTRLLSAALAMERSMSARETVATQEAAD-----AETTADEDDEEADSTAVETAA---- 302
            EG+R L A LA ERS+SARE VA QEAA+     A   ADE    A++ A   A     
Sbjct: 251 REGSRRLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQ 310

Query: 303 PVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVG-GGSERKCC 362
           PVRMSLMDLLEETDRQMGF GSRY I DE +E+ EEEEEEEE        G GG E+ CC
Sbjct: 311 PVRMSLMDLLEETDRQMGFVGSRYMIGDEDDEDYEEEEEEEEDGGGGGGGGVGGVEQNCC 370

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BLAST of CmoCh08G002200 vs. TrEMBL
Match: V4T971_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 9.3e-61
Identity = 189/405 (46.67%), Postives = 230/405 (56.79%), Query Frame = 1 

Query: 6   RRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKS 65
           RRITL DQM AV D R+   GLTL+ +LT +KR SP  +P     GRTLLDI+RD+    
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  PAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAA 125
              G+++RKSWK  RDRLRL  R+     +S+R                P S  P+ +++
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLK-RAGAAWTSSVRI---------------PTSDIPIPSSS 139

Query: 126 VP---VLRQISRRSSTRLSQNIPTSPEAT----NSGESPE-NNNSDSTIADTGSRSSRSL 185
           +       Q+ RRSS R   N P    A+    N G  P+      S +A +    ++S 
Sbjct: 140 LSNSNPRSQLIRRSSVRFQTN-PAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSS 199

Query: 186 ----------------LRPQMSRRNSTR----RSLERSESFTDLTEPVHEGTRLLSAALA 245
                            +PQ+SR NSTR     +    ++  D  +   EGTR L+  LA
Sbjct: 200 HHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLA 259

Query: 246 MERSMSARETVATQEAADAETTADEDDEEADSTA---------VETAAPV-----RMSLM 305
            ER +SARE VA QEAA+AE  A   + EA++ A          E A PV     RMSLM
Sbjct: 260 QERQLSAREAVAAQEAAEAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLM 319

Query: 306 DLLEETDRQMGFEGSRYKI-EDEVEEEEEEEEEE-----EEKEEEVAVVGGGSERKCCVC 363
           DLLEETDRQMG EGSRY + EDE EEEEEEEE E     EE+ ++V    GG E  CCVC
Sbjct: 320 DLLEETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVC 379

[Close]
BLAST of CmoCh08G002200 vs. TrEMBL
Match: A0A067FRX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.0e-56
Identity = 179/402 (44.53%), Postives = 228/402 (56.72%), Query Frame = 1 

Query: 14  MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 73
           M AV D R+   GLTL+ +LT +KR SP P+P     GRTLLDI+RD+       G+++R
Sbjct: 1   MSAVQDRRDPLAGLTLDAILT-NKRPSPPPAPA----GRTLLDIIRDEDPNGKNFGHKDR 60

Query: 74  K----------------SWKFLRDRLRL---------------NLRSQIPPPNSLRFAVF 133
           K                +W      +R+               N RSQ+   +S+RF   
Sbjct: 61  KSWKLFRDRLRLKRAGAAWT---SSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTN 120

Query: 134 SSAEMTSNEEESPESTTPVVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNS 193
            + E+ S  E++          A P   Q +RR S++++ + P   ++++  +SPE   S
Sbjct: 121 PAGELASQLEDN--------RGAPP---QFARRPSSKVASSSPGPTQSSHHEDSPEGEGS 180

Query: 194 DSTIADTGSRSSRSLLRPQMSRRNSTR----RSLERSESFTDLTEPVHEGTRLLSAALAM 253
            +       RSSR   +PQ+SR NSTR     +    ++  D  +   EGTR L+  LA 
Sbjct: 181 PT-------RSSR---QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQ 240

Query: 254 ERSMSARETVATQEAADAETTADEDDEEADSTA-------VETAAPV-----RMSLMDLL 313
           ER +SARE VA QEAA+AE  A E + EA++ A        E A PV     RMSLMDLL
Sbjct: 241 ERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLL 300

Query: 314 EETDRQMGFEGSRYKI-EDEVEEEEEEEEEE-----EEKEEEVAVVGGGSERKCCVCMVR 363
           EETDRQMG EGSRY + EDE EEEE+E E E     EE+ ++V    GG E  CCVCMVR
Sbjct: 301 EETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVR 360

[Close]
BLAST of CmoCh08G002200 vs. TrEMBL
Match: A0A061DMI0_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002916 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.2e-53
Identity = 170/376 (45.21%), Postives = 208/376 (55.32%), Query Frame = 1 

Query: 14  MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 73
           M AV DGR    GLTL+ +L   KR  P P+       RTLLDI+R+D    P    +++
Sbjct: 1   MSAVDDGRNALAGLTLDAILGNAKRPEPPPT-----QNRTLLDIIRED---GPT---KDK 60

Query: 74  KSWKFLRDRLRLNLR-----SQIPPPNS-----------LRFAVFSSAEMTSNEEESPES 133
           KSWK  RD+LRL        S +  P S            R   F+S    S   E    
Sbjct: 61  KSWKTFRDKLRLKRAGAAWTSSVHIPASDVNVHGNRSHFSRRGSFASNSADSTRVEDGGE 120

Query: 134 TTPVVAAAVPVLR-QISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRS 193
             PV    V   R Q++RRSS R   N+  +          ++++S      + +  SRS
Sbjct: 121 RAPVSDPTVMNSRLQLARRSSVRFGNNLFQT----------DHDDSADVSMPSDAPPSRS 180

Query: 194 LLRPQMSRRNSTR------RSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVAT 253
             RPQ++R  STR       S +   S  D +    +GT  L AALA ER++SARE VA 
Sbjct: 181 F-RPQIARHRSTRFPSSNTASYDDDNSSEDNSPEARDGTHRLGAALAEERALSAREAVAA 240

Query: 254 QEAADAETTADEDDEEA----DSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEV 313
           QEAA+A   A   ++ A    ++  V    PVRMSLMDLLEET       GSRY + D+ 
Sbjct: 241 QEAAEAAAAAAAAEQAAVENNEAPTVAAEEPVRMSLMDLLEET-------GSRYTMGDDD 300

Query: 314 EEEEEEEEEEEEKEEEVAVVGGGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRG 363
           ++ +EEEEEEEE EEEVA   GG E  CCVCMVRHKGAAFIPCGHTFCRLCSREL V RG
Sbjct: 301 DDYDEEEEEEEEGEEEVAAASGGIEYTCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG 347

[Close]
BLAST of CmoCh08G002200 vs. TAIR10
Match: AT3G07120.1 (AT3G07120.1 RING/U-box superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 138/359 (38.44%), Postives = 186/359 (51.81%), Query Frame = 1 

Query: 40  SPNPSPEVRL-----NGRTLLDILRDDVGKSPAVGNRERKSWKFLRDRLRLNLRSQ---- 99
           SP P P   L       +TL DI+R++  K    G+++R +W+  R++LRL         
Sbjct: 33  SPPPLPSKSLVPHRPTSQTLFDIIREEYAKE---GHKDRTTWQIFREKLRLKRTGSAWTS 92

Query: 100 ----------IPPPNSLRFAVFS-SAEMTSNE--EESPESTTPVVAAAVPVLRQISRRSS 159
                     IP P  +  A  S SA +   +     P S  P  +         +R SS
Sbjct: 93  SLHIPASDILIPNPKHIGTAFRSHSAGLNIRDLVHAIPMSDPPGSSGRA----MFTRGSS 152

Query: 160 TRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSES 219
            R+            S ++P+++   S + D     SRS  +PQ+SR +S R   E  E+
Sbjct: 153 MRVG-----------SSKNPDDSPDISVLED--GPPSRSF-KPQLSRHDSVRDHSEGEEN 212

Query: 220 FTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTA-------DEDDEEADST 279
                 P+             ER MSARE VA QEAA+AE  A       D+DDEE DS 
Sbjct: 213 -NRRRHPI--------VTFVEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEEDDSG 272

Query: 280 AVE------TAAPVR-MSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEV 339
             E       + P + MSLMDLLEETDRQMG  GSRY + DE EE EE+EE+E  +EE  
Sbjct: 273 ETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAM-DEDEEYEEDEEDENNEEEGD 332

Query: 340 AVVGGGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
           +  GG  E  CCVCMV+ KGA+F PCGHTFC+LCS+EL+  +G+CP+C+ F+LE L+IF
Sbjct: 333 SHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQKGHCPVCSSFVLEFLEIF 360

[Close]
BLAST of CmoCh08G002200 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-23
Identity = 110/291 (37.80%), Postives = 139/291 (47.77%), Query Frame = 1 

Query: 81  DRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEE-SPESTTPVVAAAVPVLRQISRRSSTR 140
           DRLR+ L  ++    S R  +   A + +++   SP+  +P      P  R  S RS   
Sbjct: 8   DRLRVTLLDRMSTVESSRSCLTLEAILMADKNRTSPQILSP------PPSRSQSNRSLVE 67

Query: 141 LSQNIPTSPEATNSGESPENN-----NSDSTIADTGSRSSRSLLRPQMSRRNSTRRS--- 200
           + Q          + +S         N    I+   S S  SL  P  +R N + +    
Sbjct: 68  VMQREHRHSRDKTAWKSLREKLRLKRNGSVWIS---SNSIPSLDTPIPNRDNVSHQLGFL 127

Query: 201 LERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTA 260
           L  S + T+    V EG   L A LA ER++SARE          ET A+ + E      
Sbjct: 128 LSNSGNVTEEASSV-EGRIRLGAVLAEERALSAREE---------ETPAEREVE------ 187

Query: 261 VETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGGSE 320
                P RMSLM+LLEE + QM F                    + E EEEVA V   +E
Sbjct: 188 -----PARMSLMELLEENEGQMSFVSV-----------------DGEAEEEVAAVTA-AE 247

Query: 321 RKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
             CCVCMVR KGAAFIPCGHTFCRLCSREL V RGNCPLCN  ILE+LD+F
Sbjct: 248 ISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]
BLAST of CmoCh08G002200 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-19
Identity = 87/222 (39.19%), Postives = 112/222 (50.45%), Query Frame = 1 

Query: 156 SPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEPV---------- 215
           +P  N+S S++ D   R  R       S R+  R  L+R+ +    + P+          
Sbjct: 58  TPVRNHSSSSLLDVMRRERRRDKTAWKSLRDKLR--LKRTATGWISSNPIPTLDNHILTP 117

Query: 216 ----HEGTRLLSAALAMERSMSARETV-ATQEAADAETTADEDDEEADSTAVETAAPVRM 275
               H   RL       E + S+R+   A +EAA+ E           +       P RM
Sbjct: 118 DNDSHRFNRLGFLLTNSETNRSSRDVSDAAEEAAEREGRL-----RLGTVLAAEREPPRM 177

Query: 276 SLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGGSERKCCVCMVR 335
           SLM+LLE+ D      G  Y++    E E E  +  +   E VAV G  +E  CCVCMVR
Sbjct: 178 SLMELLEDND------GHMYELSARDEVEVEGRDGCDGGGEAVAVTGA-AELGCCVCMVR 237

Query: 336 HKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
            KGAAFIPCGHTFCRLCSREL V RGNCPLCN  IL++LDIF
Sbjct: 238 SKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265

[Close]
BLAST of CmoCh08G002200 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-19
Identity = 64/162 (39.51%), Postives = 86/162 (53.09%), Query Frame = 1 

Query: 201 LTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVETAAPVRM 260
           +T P+++G  L + ALA ER+    ET A+                       +  P+++
Sbjct: 85  VTGPLNQGMNL-ATALAAERNYRTEETEASG----------------------SLTPLKV 144

Query: 261 SLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGGSERKCCVCMVR 320
           SLM LLEET  ++  E              E E E         V G  ++  CCVCM R
Sbjct: 145 SLMRLLEETAERVVVE--------------ENETERVTASASSTVRGVNNDSVCCVCMGR 204

Query: 321 HKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
            KGAAFIPCGHTFCR+CSRE+ ++RG+CPLCN  I+EILDI+
Sbjct: 205 KKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209

[Close]
BLAST of CmoCh08G002200 vs. TAIR10
Match: AT1G62370.1 (AT1G62370.1 RING/U-box superfamily protein)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 1 

Query: 309 GSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
           G++  CCVCM R KGAAFIPCGHT+CR+CSRE+ ++RG CPLCN  I ++LD++
Sbjct: 151 GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204

[Close]
BLAST of CmoCh08G002200 vs. NCBI nr
Match: gi|659116324|ref|XP_008458019.1| (PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 6.3e-135
Identity = 274/367 (74.66%), Postives = 298/367 (81.20%), Query Frame = 1 

Query: 1   MEGGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60
           MEGGRRRITLYDQMLAV DGREL  G TLNDVLT+ KRASP+PSP VRL+GRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTP 120
           DVGKSP V NRERKSWKFLRDRLRLNLRSQIPPPNSLRF  F+SA+M  N+E+SPE TT 
Sbjct: 61  DVGKSP-VSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTT 120

Query: 121 VVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRP 180
              +A P LRQISRR+STR + ++P S EATNS  SP+NN++    A       RSLLRP
Sbjct: 121 AAVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSA----AAASGAGGRSLLRP 180

Query: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTR LSAALA ERSMSARE VA QEAADAE  A
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA 240

Query: 241 DEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKE 300
           D +++E +  A  T AP+RMSLMDLLEETDRQMGFEGS Y+IED    EEEEEEEEEE E
Sbjct: 241 DVEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIED----EEEEEEEEEEIE 300

Query: 301 EEVAVV-----GGGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFI 360
            EV  V     GGG+ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFI
Sbjct: 301 NEVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFI 358

Query: 361 LEILDIF 363
           LEILDIF
Sbjct: 361 LEILDIF 358

[Close]
BLAST of CmoCh08G002200 vs. NCBI nr
Match: gi|778726974|ref|XP_011659191.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus])

HSP 1 Score: 463.0 bits (1190), Expect = 4.8e-127
Identity = 263/366 (71.86%), Postives = 288/366 (78.69%), Query Frame = 1 

Query: 1   MEGGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60
           MEGGRRRITLYDQMLAV DGR+L GG TLNDVL + KRA P+ SP VRL+GRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTP 120
           DVGKSP V NRER SWKF RDRLRL++RSQIPP NSLRF   +SAEM SN+E SPE TT 
Sbjct: 61  DVGKSP-VSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTT 120

Query: 121 VVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRP 180
              +A P LRQISRR+STRL+ ++  S EATNS  SP+NN   S  A +GS   RSLLRP
Sbjct: 121 AAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNN---SAAAASGS-GGRSLLRP 180

Query: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTR LSAALA ERSMSARE V  QEAADAE T 
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV 240

Query: 241 DEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKE 300
           DE++++ +  A  T APVRMSLMDLLEETDRQMGFEGS Y+IED      E+EEEE E E
Sbjct: 241 DEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIED------EDEEEEIENE 300

Query: 301 EEVAVVG----GGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFIL 360
               V G    GG+E  CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFIL
Sbjct: 301 VSTTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIL 355

Query: 361 EILDIF 363
           EILDIF
Sbjct: 361 EILDIF 355

[Close]
BLAST of CmoCh08G002200 vs. NCBI nr
Match: gi|703151216|ref|XP_010110062.1| (hypothetical protein L484_003042 [Morus notabilis])

HSP 1 Score: 279.3 bits (713), Expect = 9.8e-72
Identity = 204/407 (50.12%), Postives = 245/407 (60.20%), Query Frame = 1 

Query: 3   GGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLN-------GRTLL 62
           G  RRITL DQM A+ DG +L+G LTL+D+L   KRA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLSG-LTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DILRDDVGKSPA----VGNRERKSWKFLRDRLRL-----------------------NLR 122
           DI+RD+  K+ +    VGNR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQISRRSSTRLSQNIPTSP 182
           SQ+   +S R +  S+ EM   E+ S +   P ++        +SRRSS R S N   + 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS--------LSRRSSCRFSPNALFAS 190

Query: 183 EATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEP---V 242
           +   S +   NNN++++ A      +   LRPQ+SRR+STR S    +S TD TEP   +
Sbjct: 191 DPALSDDGSNNNNNNNSGAPPAQVPT---LRPQISRRHSTRFSPVIEDSVTDPTEPPPPM 250

Query: 243 HEGTRLLSAALAMERSMSARETVATQEAAD-----AETTADEDDEEADSTAVETAA---- 302
            EG+R L A LA ERS+SARE VA QEAA+     A   ADE    A++ A   A     
Sbjct: 251 REGSRRLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQ 310

Query: 303 PVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVG-GGSERKCC 362
           PVRMSLMDLLEETDRQMGF GSRY I DE +E+ EEEEEEEE        G GG E+ CC
Sbjct: 311 PVRMSLMDLLEETDRQMGFVGSRYMIGDEDDEDYEEEEEEEEDGGGGGGGGVGGVEQNCC 370

[Close]
BLAST of CmoCh08G002200 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 194/412 (47.09%), Postives = 238/412 (57.77%), Query Frame = 1 

Query: 1   MEGG-------RRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRA--SPNPSPEVRLNG 60
           MEGG       RRR+TL DQM A  D R+L G LTL+DVL   KR   +P P+P    +G
Sbjct: 44  MEGGGGRLSSDRRRVTLLDQMSAAADSRDLAG-LTLDDVLGTEKRPVPAPPPAPPRSQSG 103

Query: 61  RTLLDILRDDVGKS---PAVGNRERKSWKFLRDRLRL---------------------NL 120
           RTLLDI+RD+  KS       NR++K+WK  +DRLRL                     N 
Sbjct: 104 RTLLDIIRDEEPKSGTFKGFSNRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNH 163

Query: 121 RSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLR-------QISRRSSTRL 180
           RS +   NS+ F   S   ++ +    P      + A   ++        QISRR STR 
Sbjct: 164 RSLLLRHNSVNFHTASLPTVSRHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTRF 223

Query: 181 SQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTD 240
                        G    +N+ D  +A       ++  RPQ+SRR+S R +L   ++  D
Sbjct: 224 -------------GAFSSDNSDDDVLA------GQNTTRPQISRRHSVRFALSSDDNVGD 283

Query: 241 LTEPVH-EGTRLLSAALAMERSMSARETVATQEAADAETTA---------DEDDEEADST 300
            T+P   EG+R LSAALA ERS+SARE VA QEAA+AE  A         +++D E+   
Sbjct: 284 QTDPPQREGSRRLSAALADERSLSAREAVAAQEAAEAEAAAAAAAAEQEAEDEDGESAPE 343

Query: 301 AVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGGS 360
             E   PVRMSLMDLLEETDRQMG  GSRY + DE + +EEEEE+EE++EEE      G 
Sbjct: 344 GGEGGQPVRMSLMDLLEETDRQMGLVGSRYMMGDEDDYDEEEEEDEEDEEEE----SNGV 403

Query: 361 ERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
           E  CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Sbjct: 404 EHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 431

[Close]
BLAST of CmoCh08G002200 vs. NCBI nr
Match: gi|567902210|ref|XP_006443593.1| (hypothetical protein CICLE_v10020442mg [Citrus clementina])

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 189/405 (46.67%), Postives = 230/405 (56.79%), Query Frame = 1 

Query: 6   RRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKS 65
           RRITL DQM AV D R+   GLTL+ +LT +KR SP  +P     GRTLLDI+RD+    
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  PAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAA 125
              G+++RKSWK  RDRLRL  R+     +S+R                P S  P+ +++
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLK-RAGAAWTSSVRI---------------PTSDIPIPSSS 139

Query: 126 VP---VLRQISRRSSTRLSQNIPTSPEAT----NSGESPE-NNNSDSTIADTGSRSSRSL 185
           +       Q+ RRSS R   N P    A+    N G  P+      S +A +    ++S 
Sbjct: 140 LSNSNPRSQLIRRSSVRFQTN-PAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSS 199

Query: 186 ----------------LRPQMSRRNSTR----RSLERSESFTDLTEPVHEGTRLLSAALA 245
                            +PQ+SR NSTR     +    ++  D  +   EGTR L+  LA
Sbjct: 200 HHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLA 259

Query: 246 MERSMSARETVATQEAADAETTADEDDEEADSTA---------VETAAPV-----RMSLM 305
            ER +SARE VA QEAA+AE  A   + EA++ A          E A PV     RMSLM
Sbjct: 260 QERQLSAREAVAAQEAAEAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLM 319

Query: 306 DLLEETDRQMGFEGSRYKI-EDEVEEEEEEEEEE-----EEKEEEVAVVGGGSERKCCVC 363
           DLLEETDRQMG EGSRY + EDE EEEEEEEE E     EE+ ++V    GG E  CCVC
Sbjct: 320 DLLEETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVC 379

The following BLAST results are available for this feature:
BLAST of CmoCh08G002200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh08G002200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6R9_CUCSA3.3e-12771.86Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1[more]
W9SC41_9ROSA6.9e-7250.12Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1[more]
V4T971_9ROSI9.3e-6146.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1[more]
A0A067FRX5_CITSI4.0e-5644.53Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1[more]
A0A061DMI0_THECC4.2e-5345.21RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002916 PE=4 S... [more]
BLAST of CmoCh08G002200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07120.12.2e-3738.44 RING/U-box superfamily protein[more]
AT3G25030.11.4e-2337.80 RING/U-box superfamily protein[more]
AT4G13100.26.0e-1939.19 RING/U-box superfamily protein[more]
AT4G03965.16.0e-1939.51 RING/U-box superfamily protein[more]
AT1G62370.11.5e-1762.96 RING/U-box superfamily protein[more]
BLAST of CmoCh08G002200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116324|ref|XP_008458019.1|6.3e-13574.66PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo][more]
gi|778726974|ref|XP_011659191.1|4.8e-12771.86PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus][more]
gi|703151216|ref|XP_010110062.1|9.8e-7250.12hypothetical protein L484_003042 [Morus notabilis][more]
gi|1009149507|ref|XP_015892515.1|1.3e-6847.09PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba][more]
gi|567902210|ref|XP_006443593.1|1.3e-6046.67hypothetical protein CICLE_v10020442mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G002200.1CmoCh08G002200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 314..351
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 314..352
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 297..353
score: 1.7
NoneNo IPR availableunknownCoilCoilcoord: 279..306
scor
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 259..362
score: 1.2
NoneNo IPR availablePANTHERPTHR12183:SF17SUBFAMILY NOT NAMEDcoord: 259..362
score: 1.2
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 311..355
score: 5.8
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 313..358
score: 8.39