CSPI07G14350 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G14350
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRING/U-box superfamily protein, putative
LocationChr7 : 12883477 .. 12885090 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCCTTTTTAAGTATAGATCTTGAAGCTCTCAATTTCTTCATTCCTCTTCTCTTTTTCCGAGATTCTTAGAAGTTTTTTCTCGGAATTATTTTTTGGAGGAGTTTTCTCGGAAATTTTTGGGGTTTTCTTTGTTTTTTTCTGGGTCTGATTTCGGATCTGTGAAAAGAATTCGATGGTTCCGTTTGGGATTCAATTGTTTTTTTTATTTTCCCGAGAAATTTTGGATTCTTCTTCCTGTTGAACATTTGGGGGTTTTTTGATTTATTGTTTGATTGGGTTTTTTTTGGTGCTAATCAATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTAAGCGACGGCAGAGACCTCGCCGGTGGTTTTACCCTCAACGACGTTTTGGCCATTCAAAAGAGAGCCTTGCCTAGTTCTTCGCCGGCGGTGAGATTACACGGCCGGACTTTGCTCGATATCATTAGAGACGACGTAGGAAAATCCCCTGTTAGTAACCGAGAGAGGACATCTTGGAAGTTTTTCAGAGATCGTCTTCGTTTGAGCATCAGATCTCAAATTCCGCCGTCGAATTCGCTTCGTTTTCCCGGTCTTACGTCGGCGGAGATGATGTCAAACGACGAACATTCGCCGGAACCCACCACTACTGCTGCCGTCTCCGCCGCTCCGTCTCTCAGGCAGATATCACGGCGGAATTCGACGCGGTTAAACCCGAGCGTCCAGCCATCGTCTGAGGCTACAAATTCCAATGCCTCTCCAGATAACAATTCCGCCGCCGCCGCATCCGGCAGCGGTGGCCGGAGCCTCCTCAGACCGCAAATGTCGCGGCACAACTCGACGAGATTCTCTGTTGAACGAAGTGAGAGTTTCACGGACTTGACGGAGCCGGCGCGTGAGGGCACGCGCCGCCTCTCGGCTGCGTTGGCAGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGACGGCCCAAGAAGCCGCGGACGCAGAAGCCACCGTCGACGAAGAAGAACAGCAACAAGAACAAGTAGCAGAGTCCACGCCGGCGCCGGTGAGAATGTCGCTGATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGGTTTGAAGGGTCAACATATAGAATAGAAGACGAAGACGAGGAGGAAGAAATTGAGAATGAGGTGAGCACCACCGTATGCGGCGGAGGAAACAGTGGGGGTACGGAACCGCATTGCTGCGTGTGCATGGTACGTCATAAAGGGGCAGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTTTGTTCAAGAGAGCTTTGGGTCAGTAGAGGGAACTGTCCCCTTTGCAATGGCTTCATTTTGGAGATTCTTGACATCTTTTGATTTTCACAAATTCAAATGAAATTTAAACTTCTTTCTTCGTCTTTTTCAGTGGCTTATTGAAATGTTTGTGAATACTCTTTGAATAAACCATTTCAAGTTTTTTCATTTCTTATTTTTAGCTTCATATTATATCCTGGTTCTCATTCACTGGTTTGTGTTTGACTTGGTGGAAAGAATTAGGAAAATTGGCCAACATTAAGTGGATTGAAACTTAGATTTAAATACAAATATAGCAAATATTACCGCCC

mRNA sequence

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTAAGCGACGGCAGAGACCTCGCCGGTGGTTTTACCCTCAACGACGTTTTGGCCATTCAAAAGAGAGCCTTGCCTAGTTCTTCGCCGGCGGTGAGATTACACGGCCGGACTTTGCTCGATATCATTAGAGACGACGTAGGAAAATCCCCTGTTAGTAACCGAGAGAGGACATCTTGGAAGTTTTTCAGAGATCGTCTTCGTTTGAGCATCAGATCTCAAATTCCGCCGTCGAATTCGCTTCGTTTTCCCGGTCTTACGTCGGCGGAGATGATGTCAAACGACGAACATTCGCCGGAACCCACCACTACTGCTGCCGTCTCCGCCGCTCCGTCTCTCAGGCAGATATCACGGCGGAATTCGACGCGGTTAAACCCGAGCGTCCAGCCATCGTCTGAGGCTACAAATTCCAATGCCTCTCCAGATAACAATTCCGCCGCCGCCGCATCCGGCAGCGGTGGCCGGAGCCTCCTCAGACCGCAAATGTCGCGGCACAACTCGACGAGATTCTCTGTTGAACGAAGTGAGAGTTTCACGGACTTGACGGAGCCGGCGCGTGAGGGCACGCGCCGCCTCTCGGCTGCGTTGGCAGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGACGGCCCAAGAAGCCGCGGACGCAGAAGCCACCGTCGACGAAGAAGAACAGCAACAAGAACAAGTAGCAGAGTCCACGCCGGCGCCGGTGAGAATGTCGCTGATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGGTTTGAAGGGTCAACATATAGAATAGAAGACGAAGACGAGGAGGAAGAAATTGAGAATGAGGTGAGCACCACCGTATGCGGCGGAGGAAACAGTGGGGGTACGGAACCGCATTGCTGCGTGTGCATGGTACGTCATAAAGGGGCAGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTTTGTTCAAGAGAGCTTTGGGTCAGTAGAGGGAACTGTCCCCTTTGCAATGGCTTCATTTTGGAGATTCTTGACATCTTTTGA

Coding sequence (CDS)

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTAAGCGACGGCAGAGACCTCGCCGGTGGTTTTACCCTCAACGACGTTTTGGCCATTCAAAAGAGAGCCTTGCCTAGTTCTTCGCCGGCGGTGAGATTACACGGCCGGACTTTGCTCGATATCATTAGAGACGACGTAGGAAAATCCCCTGTTAGTAACCGAGAGAGGACATCTTGGAAGTTTTTCAGAGATCGTCTTCGTTTGAGCATCAGATCTCAAATTCCGCCGTCGAATTCGCTTCGTTTTCCCGGTCTTACGTCGGCGGAGATGATGTCAAACGACGAACATTCGCCGGAACCCACCACTACTGCTGCCGTCTCCGCCGCTCCGTCTCTCAGGCAGATATCACGGCGGAATTCGACGCGGTTAAACCCGAGCGTCCAGCCATCGTCTGAGGCTACAAATTCCAATGCCTCTCCAGATAACAATTCCGCCGCCGCCGCATCCGGCAGCGGTGGCCGGAGCCTCCTCAGACCGCAAATGTCGCGGCACAACTCGACGAGATTCTCTGTTGAACGAAGTGAGAGTTTCACGGACTTGACGGAGCCGGCGCGTGAGGGCACGCGCCGCCTCTCGGCTGCGTTGGCAGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGACGGCCCAAGAAGCCGCGGACGCAGAAGCCACCGTCGACGAAGAAGAACAGCAACAAGAACAAGTAGCAGAGTCCACGCCGGCGCCGGTGAGAATGTCGCTGATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGGTTTGAAGGGTCAACATATAGAATAGAAGACGAAGACGAGGAGGAAGAAATTGAGAATGAGGTGAGCACCACCGTATGCGGCGGAGGAAACAGTGGGGGTACGGAACCGCATTGCTGCGTGTGCATGGTACGTCATAAAGGGGCAGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTTTGTTCAAGAGAGCTTTGGGTCAGTAGAGGGAACTGTCCCCTTTGCAATGGCTTCATTTTGGAGATTCTTGACATCTTTTGA
Homology
[Close]
BLAST of CSPI07G14350 vs. TrEMBL
Match: A0A0A0K6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 7.2e-191
Identity = 353/355 (99.44%), Postives = 353/355 (99.44%), Query Frame = 1 

Query: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120
           DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH 180
           AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH 180

Query: 181 NSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ 240
           NSTRFSVERSESFTDLTEP REGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ
Sbjct: 181 NSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ 240

Query: 241 QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGNS 300
           QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGG S
Sbjct: 241 QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGGS 300

Query: 301 GGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 356
           GGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Sbjct: 301 GGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 355

[Close]
BLAST of CSPI07G14350 vs. TrEMBL
Match: W9SC41_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-77
Identity = 201/397 (50.63%), Postives = 241/397 (60.71%), Query Frame = 1 

Query: 3   GGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPS--------SSPAVRLHGRTL 62
           G  RRITL DQM A++DG DL+G  TL+D+L  +KRA+P         S P ++  GRTL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLSG-LTLDDILRSRKRAVPEPPPPPPFPSEPPIQ-PGRTL 70

Query: 63  LDIIRDDVGKSP-----VSNRERTSWKFFRDRLRLSIRSQ---------------IPPSN 122
           LDIIRD+  K+      V NR+R SWK F+DRLRL                    + PS 
Sbjct: 71  LDIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPST 130

Query: 123 SLRFPGLTSAEMMSNDEHSPEPTTTAAVSAAPSLRQISRRNSTRLNPSVQPSSE-ATNSN 182
             +    +SA   +   H   P   A+         +SRR+S R +P+   +S+ A + +
Sbjct: 131 RSQVSRRSSARNSTESAHEMIPLEDASSQGFRPHISLSRRSSCRFSPNALFASDPALSDD 190

Query: 183 ASPDNNSAAAASGSGGRSLLRPQMSRHNSTRFSVERSESFTDLTEPA---REGTRRLSAA 242
            S +NN+  + +       LRPQ+SR +STRFS    +S TD TEP    REG+RRL A 
Sbjct: 191 GSNNNNNNNSGAPPAQVPTLRPQISRRHSTRFSPVIEDSVTDPTEPPPPMREGSRRLYAV 250

Query: 243 LAEERSMSAREAVTAQEAAD---------AEATVDEEEQQQEQVAESTPAPVRMSLMDLL 302
           LAEERS+SAREAV AQEAA+         A+  V   E     VAE+ P PVRMSLMDLL
Sbjct: 251 LAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQPVRMSLMDLL 310

Query: 303 EETDRQMGFEGSTYRIEDEDEE---EEIENEVSTTVCGGGNSGGTEPHCCVCMVRHKGAA 356
           EETDRQMGF GS Y I DED+E   EE E E      GGG  GG E +CCVCMVRHKGAA
Sbjct: 311 EETDRQMGFVGSRYMIGDEDDEDYEEEEEEEEDGGGGGGGGVGGVEQNCCVCMVRHKGAA 370

[Close]
BLAST of CSPI07G14350 vs. TrEMBL
Match: V4T971_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 7.7e-68
Identity = 190/401 (47.38%), Postives = 231/401 (57.61%), Query Frame = 1 

Query: 6   RRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD-DVGK 65
           RRITL DQM AV D RD   G TL D +   KR  P  +PA    GRTLLDIIRD D   
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTL-DAILTNKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  SPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTAAVSA 125
               +++R SWK FRDRLRL  R+    ++S+R P             S  P  ++++S 
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLK-RAGAAWTSSVRIP------------TSDIPIPSSSLSN 139

Query: 126 APSLRQISRRNSTRL--NPSVQ------------------PSSEATNSNASPDNNS---- 185
           +    Q+ RR+S R   NP+ +                  PSS+  +S+  P  +S    
Sbjct: 140 SNPRSQLIRRSSVRFQTNPAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSSHHED 199

Query: 186 AAAASGSGGRSLLRPQMSRHNSTRFSVERS----ESFTDLTEPAREGTRRLSAALAEERS 245
           +    GS  RS  +PQ+SRHNSTR     +    ++  D  + AREGTRRL+  LA+ER 
Sbjct: 200 SPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQ 259

Query: 246 MSAREAVTAQEAADAEATVDEEEQQQEQVAEST--------------PAPVRMSLMDLLE 305
           +SAREAV AQEAA+AEA     E + E  AE++              P   RMSLMDLLE
Sbjct: 260 LSAREAVAAQEAAEAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE 319

Query: 306 ETDRQMGFEGSTYRI-----EDEDEEEEIENEVSTTVCGGG---NSGGTEPHCCVCMVRH 356
           ETDRQMG EGS Y +     E+E+EEEE E E      G     N+GG E +CCVCMVRH
Sbjct: 320 ETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRH 379

[Close]
BLAST of CSPI07G14350 vs. TrEMBL
Match: A0A067FRX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.2e-64
Identity = 184/391 (47.06%), Postives = 225/391 (57.54%), Query Frame = 1 

Query: 14  MLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD-DVGKSPVSNRER 73
           M AV D RD   G TL+ +L   KR  P  +PA    GRTLLDIIRD D       +++R
Sbjct: 1   MSAVQDRRDPLAGLTLDAILT-NKRPSPPPAPA----GRTLLDIIRDEDPNGKNFGHKDR 60

Query: 74  TSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTAAVSAAPSLRQIS 133
            SWK FRDRLRL  R+    ++S+R P             S  P  ++++S +    Q+ 
Sbjct: 61  KSWKLFRDRLRLK-RAGAAWTSSVRIP------------TSDIPIPSSSLSNSNPRSQLI 120

Query: 134 RRNSTRL--NPSVQ------------------PSSEATNSNASPDNNS----AAAASGSG 193
           RR+S R   NP+ +                  PSS+  +S+  P  +S    +    GS 
Sbjct: 121 RRSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSP 180

Query: 194 GRSLLRPQMSRHNSTRFSVERS----ESFTDLTEPAREGTRRLSAALAEERSMSAREAVT 253
            RS  +PQ+SRHNSTR     +    ++  D  + AREGTRRL+  LA+ER +SAREAV 
Sbjct: 181 TRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVA 240

Query: 254 AQEAADAEATVDEEEQQQE-----------QVAEST-PAPVRMSLMDLLEETDRQMGFEG 313
           AQEAA+AEA   E E + E           + AE   P   RMSLMDLLEETDRQMG EG
Sbjct: 241 AQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEG 300

Query: 314 STYRI---EDEDEEEEIENEVSTTVCGGG-----NSGGTEPHCCVCMVRHKGAAFIPCGH 356
           S Y +   EDE+EE+E E E        G     N+GG E +CCVCMVRHKGAAFIPCGH
Sbjct: 301 SRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH 360

[Close]
BLAST of CSPI07G14350 vs. TrEMBL
Match: A0A0D2QUT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G233400 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.8e-56
Identity = 170/373 (45.58%), Postives = 209/373 (56.03%), Query Frame = 1 

Query: 1   MEGG-RRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIR 60
           MEGG RRR+TL++Q+ AV +GRD   G TL+ VL   KR  P   PA     RTLL+IIR
Sbjct: 1   MEGGNRRRLTLFEQISAVENGRDALAGLTLDAVLGNAKR--PEQPPA---QNRTLLEIIR 60

Query: 61  DDVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTT 120
           DD      SN+ + SWK  RD+LRL   +    ++S+R P   +++++ ND +       
Sbjct: 61  DDG-----SNKGKKSWKALRDKLRLKRLAVSARTSSVRIP---ASDVIVNDNNRS----- 120

Query: 121 AAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASP-------DNNSAAAASGSG---- 180
                     Q SR+ S R + S  P+       ++P       ++    A  GSG    
Sbjct: 121 ----------QFSRQGSFRSH-SADPTGVEDRGGSAPVSDPTVMNSRPQLARFGSGRFVQ 180

Query: 181 ------GRSLLRPQMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREA 240
                  R  L P  S +N+ R + + SE   D +  AR+ TRRL AAL EER++SAREA
Sbjct: 181 DHESEISRQHLTPFPSSNNA-RNNADSSEDEDDDSPVARDETRRLGAALEEERALSAREA 240

Query: 241 VTAQEAADAEATVDEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDE 300
             AQEAA    T         +   ST  PVRMSLMD LEET+RQMG  GS     D D 
Sbjct: 241 AAAQEAATVAET-------NARPIGSTEEPVRMSLMDFLEETERQMGLTGSKCTTGDADA 300

Query: 301 EEEIENEVSTTVCGGGNSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCP 356
           ++E ENE      G   SGG E  CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCP
Sbjct: 301 DDE-ENEEKDKAEG---SGGMEQTCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCP 332

[Close]
BLAST of CSPI07G14350 vs. TAIR10
Match: AT3G07120.1 (AT3G07120.1 RING/U-box superfamily protein)

HSP 1 Score: 164.9 bits (416), Expect = 9.4e-41
Identity = 138/376 (36.70%), Postives = 198/376 (52.66%), Query Frame = 1 

Query: 14  MLAVSDGRDLAGGFTLNDVLA----IQKRALPSSSPAV-------RLHGRTLLDIIRDDV 73
           M A+    +   G +L+ VL     I+  +LPS  P         R   +TL DIIR++ 
Sbjct: 1   MSALKSRSNSLAGLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEY 60

Query: 74  GKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTAAV 133
            K    +++RT+W+ FR++LRL  R+    ++SL  P   S  ++ N +H    T   + 
Sbjct: 61  AKE--GHKDRTTWQIFREKLRLK-RTGSAWTSSLHIPA--SDILIPNPKHIG--TAFRSH 120

Query: 134 SAAPSLRQISRRNSTRLNPS-------VQPSSEATNSNASPDNNSAAAASGSGGRSL-LR 193
           SA  ++R +         P         + SS    S+ +PD++   +    G  S   +
Sbjct: 121 SAGLNIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSKNPDDSPDISVLEDGPPSRSFK 180

Query: 194 PQMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVTAQEAADAEAT 253
           PQ+SRH+S R   E  E+            R       EER MSAREAV AQEAA+AEA 
Sbjct: 181 PQLSRHDSVRDHSEGEEN---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAA 240

Query: 254 V---------DEEE----QQQEQVAESTPAPVR-MSLMDLLEETDRQMGFEGSTYRIEDE 313
                     D+EE    + +E  + S   P + MSLMDLLEETDRQMG  GS Y ++++
Sbjct: 241 AAGGSEDEDDDDEEDDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAMDED 300

Query: 314 DEEEEIENEVSTTVCGGGNSGGT-EPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRG 356
           +E EE E + +    G  + GG  E  CCVCMV+ KGA+F PCGHTFC+LCS+EL   +G
Sbjct: 301 EEYEEDEEDENNEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQKG 360

[Close]
BLAST of CSPI07G14350 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26
Identity = 102/285 (35.79%), Postives = 136/285 (47.72%), Query Frame = 1 

Query: 80  DRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEH------SPEPTTTAAVSAAPSLRQISR 139
           DRLR+++  ++    S R      A +M++         SP P+ + +  +   + Q   
Sbjct: 8   DRLRVTLLDRMSTVESSRSCLTLEAILMADKNRTSPQILSPPPSRSQSNRSLVEVMQREH 67

Query: 140 RNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRHNSTR---FSVERS 199
           R+S       + + ++         N +   S +   SL  P  +R N +    F +  S
Sbjct: 68  RHSRD-----KTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPNRDNVSHQLGFLLSNS 127

Query: 200 ESFTDLTEPAREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQQQEQVAESTP 259
            + T+      EG  RL A LAEER++SARE                    +E  AE   
Sbjct: 128 GNVTEEASSV-EGRIRLGAVLAEERALSARE--------------------EETPAEREV 187

Query: 260 APVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGNSGGTEPHCCVC 319
            P RMSLM+LLEE + QM F            + E E EV+            E  CCVC
Sbjct: 188 EPARMSLMELLEENEGQMSF---------VSVDGEAEEEVAAVT-------AAEISCCVC 247

Query: 320 MVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 356
           MVR KGAAFIPCGHTFCRLCSRELWV RGNCPLCN  ILE+LD+F
Sbjct: 248 MVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]
BLAST of CSPI07G14350 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 8.5e-26
Identity = 73/146 (50.00%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 214 ERSMSAREAVTAQEAADAEATVDEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGS 273
           E + S+R+   A E    EA   E   +   V  +   P RMSLM+LLE+ D      G 
Sbjct: 133 ETNRSSRDVSDAAE----EAAEREGRLRLGTVLAAEREPPRMSLMELLEDND------GH 192

Query: 274 TYRIEDEDEEEEIENEVSTTVCGGGNS----GGTEPHCCVCMVRHKGAAFIPCGHTFCRL 333
            Y +   DE   +E E      GGG +    G  E  CCVCMVR KGAAFIPCGHTFCRL
Sbjct: 193 MYELSARDE---VEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRL 252

Query: 334 CSRELWVSRGNCPLCNGFILEILDIF 356
           CSRELWV RGNCPLCN  IL++LDIF
Sbjct: 253 CSRELWVQRGNCPLCNTAILQVLDIF 265

[Close]
BLAST of CSPI07G14350 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-24
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 1 

Query: 246 AESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGNSGGTEP 305
           AE+   P R+SLM LLEET  ++        ++D+ +E EI   ++ ++   G   G + 
Sbjct: 119 AEADMTPRRVSLMRLLEETAEKI--------VDDDGKETEI---LTASI---GTLTGNDS 178

Query: 306 HCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 356
            CCVCM R KGAAFIPCGHTFCR+CSRELW++RG+CPLCN  I+EILDIF
Sbjct: 179 VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214

[Close]
BLAST of CSPI07G14350 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-22
Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 1 

Query: 213 EERSMSAREAVTA---QEAADAEATVDEEEQQQEQV-AESTPAPVRMSLMDLLEETDRQM 272
           E R +S  + VT    Q    A A   E   + E+  A  +  P+++SLM LLEET  ++
Sbjct: 75  ENRLVSGSDHVTGPLNQGMNLATALAAERNYRTEETEASGSLTPLKVSLMRLLEETAERV 134

Query: 273 GFEGSTYRIEDEDEEEEIENEVSTTVCGGGNSGGTEPHCCVCMVRHKGAAFIPCGHTFCR 332
                   + +E+E E +    S+TV G  N    +  CCVCM R KGAAFIPCGHTFCR
Sbjct: 135 --------VVEENETERVTASASSTVRGVNN----DSVCCVCMGRKKGAAFIPCGHTFCR 194

Query: 333 LCSRELWVSRGNCPLCNGFILEILDIF 356
           +CSRE+W++RG+CPLCN  I+EILDI+
Sbjct: 195 VCSREVWLNRGSCPLCNRPIIEILDIY 209

[Close]
BLAST of CSPI07G14350 vs. NCBI nr
Match: gi|778726974|ref|XP_011659191.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus])

HSP 1 Score: 674.5 bits (1739), Expect = 1.0e-190
Identity = 353/355 (99.44%), Postives = 353/355 (99.44%), Query Frame = 1 

Query: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120
           DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH 180
           AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH 180

Query: 181 NSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ 240
           NSTRFSVERSESFTDLTEP REGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ
Sbjct: 181 NSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ 240

Query: 241 QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGNS 300
           QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGG S
Sbjct: 241 QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGGS 300

Query: 301 GGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 356
           GGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Sbjct: 301 GGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 355

[Close]
BLAST of CSPI07G14350 vs. NCBI nr
Match: gi|659116324|ref|XP_008458019.1| (PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo])

HSP 1 Score: 607.8 bits (1566), Expect = 1.2e-170
Identity = 323/359 (89.97%), Postives = 334/359 (93.04%), Query Frame = 1 

Query: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGR+LA GFTLNDVL IQKRA PS SPAVRLHGRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120
           DVGKSPVSNRER SWKF RDRLRL++RSQIPP NSLRFPG TSA+MM NDE SPEPTTTA
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRH 180
           AVSAAPSLRQISRRNSTR NPSV PSSEATNS+ASPDNNSAAAASG+GGRSLLRPQMSRH
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGAGGRSLLRPQMSRH 180

Query: 181 NSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEEQ 240
           NSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAV AQEAADAEA  D EEQ
Sbjct: 181 NSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIADVEEQ 240

Query: 241 QQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIED----EDEEEEIENEVSTTVCG 300
           ++EQ AESTPAP+RMSLMDLLEETDRQMGFEGSTYRIED    E+EEEEIENEV TTVCG
Sbjct: 241 EEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIENEV-TTVCG 300

Query: 301 GGNSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 356
           GG  GGTE +CCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Sbjct: 301 GGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 358

[Close]
BLAST of CSPI07G14350 vs. NCBI nr
Match: gi|703151216|ref|XP_010110062.1| (hypothetical protein L484_003042 [Morus notabilis])

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77
Identity = 201/397 (50.63%), Postives = 241/397 (60.71%), Query Frame = 1 

Query: 3   GGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPS--------SSPAVRLHGRTL 62
           G  RRITL DQM A++DG DL+G  TL+D+L  +KRA+P         S P ++  GRTL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLSG-LTLDDILRSRKRAVPEPPPPPPFPSEPPIQ-PGRTL 70

Query: 63  LDIIRDDVGKSP-----VSNRERTSWKFFRDRLRLSIRSQ---------------IPPSN 122
           LDIIRD+  K+      V NR+R SWK F+DRLRL                    + PS 
Sbjct: 71  LDIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPST 130

Query: 123 SLRFPGLTSAEMMSNDEHSPEPTTTAAVSAAPSLRQISRRNSTRLNPSVQPSSE-ATNSN 182
             +    +SA   +   H   P   A+         +SRR+S R +P+   +S+ A + +
Sbjct: 131 RSQVSRRSSARNSTESAHEMIPLEDASSQGFRPHISLSRRSSCRFSPNALFASDPALSDD 190

Query: 183 ASPDNNSAAAASGSGGRSLLRPQMSRHNSTRFSVERSESFTDLTEPA---REGTRRLSAA 242
            S +NN+  + +       LRPQ+SR +STRFS    +S TD TEP    REG+RRL A 
Sbjct: 191 GSNNNNNNNSGAPPAQVPTLRPQISRRHSTRFSPVIEDSVTDPTEPPPPMREGSRRLYAV 250

Query: 243 LAEERSMSAREAVTAQEAAD---------AEATVDEEEQQQEQVAESTPAPVRMSLMDLL 302
           LAEERS+SAREAV AQEAA+         A+  V   E     VAE+ P PVRMSLMDLL
Sbjct: 251 LAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQPVRMSLMDLL 310

Query: 303 EETDRQMGFEGSTYRIEDEDEE---EEIENEVSTTVCGGGNSGGTEPHCCVCMVRHKGAA 356
           EETDRQMGF GS Y I DED+E   EE E E      GGG  GG E +CCVCMVRHKGAA
Sbjct: 311 EETDRQMGFVGSRYMIGDEDDEDYEEEEEEEEDGGGGGGGGVGGVEQNCCVCMVRHKGAA 370

[Close]
BLAST of CSPI07G14350 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 201/408 (49.26%), Postives = 247/408 (60.54%), Query Frame = 1 

Query: 1   MEGG-------RRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAV--RLHG 60
           MEGG       RRR+TL DQM A +D RDLAG  TL+DVL  +KR +P+  PA      G
Sbjct: 44  MEGGGGRLSSDRRRVTLLDQMSAAADSRDLAG-LTLDDVLGTEKRPVPAPPPAPPRSQSG 103

Query: 61  RTLLDIIRDDVGKSPV----SNRERTSWKFFRDRLRL-------SIRSQIPPS------- 120
           RTLLDIIRD+  KS      SNR++ +WK F+DRLRL       +  + IP S       
Sbjct: 104 RTLLDIIRDEEPKSGTFKGFSNRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNH 163

Query: 121 -------NSLRF-----PGLTSAEMMSNDEHSPEPTTTAAVSAAPS--LRQISRRNSTRL 180
                  NS+ F     P ++   M   +E+  +      + A P+    QISRR STR 
Sbjct: 164 RSLLLRHNSVNFHTASLPTVSRHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTRF 223

Query: 181 NPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMSRHNSTRFSVERSESFTDLTEP 240
                    A +S+ S D+  A       G++  RPQ+SR +S RF++   ++  D T+P
Sbjct: 224 G--------AFSSDNSDDDVLA-------GQNTTRPQISRRHSVRFALSSDDNVGDQTDP 283

Query: 241 A-REGTRRLSAALAEERSMSAREAVTAQEAADAEATVDE---EEQQQEQVAESTPA---- 300
             REG+RRLSAALA+ERS+SAREAV AQEAA+AEA       E++ +++  ES P     
Sbjct: 284 PQREGSRRLSAALADERSLSAREAVAAQEAAEAEAAAAAAAAEQEAEDEDGESAPEGGEG 343

Query: 301 --PVRMSLMDLLEETDRQMGFEGSTYRIEDEDE--EEEIENEVSTTVCGGGNSGGTEPHC 356
             PVRMSLMDLLEETDRQMG  GS Y + DED+  EEE E+E          S G E +C
Sbjct: 344 GQPVRMSLMDLLEETDRQMGLVGSRYMMGDEDDYDEEEEEDEEDEEE----ESNGVEHNC 403

[Close]
BLAST of CSPI07G14350 vs. NCBI nr
Match: gi|567902210|ref|XP_006443593.1| (hypothetical protein CICLE_v10020442mg [Citrus clementina])

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 190/401 (47.38%), Postives = 231/401 (57.61%), Query Frame = 1 

Query: 6   RRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD-DVGK 65
           RRITL DQM AV D RD   G TL D +   KR  P  +PA    GRTLLDIIRD D   
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTL-DAILTNKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  SPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTAAVSA 125
               +++R SWK FRDRLRL  R+    ++S+R P             S  P  ++++S 
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLK-RAGAAWTSSVRIP------------TSDIPIPSSSLSN 139

Query: 126 APSLRQISRRNSTRL--NPSVQ------------------PSSEATNSNASPDNNS---- 185
           +    Q+ RR+S R   NP+ +                  PSS+  +S+  P  +S    
Sbjct: 140 SNPRSQLIRRSSVRFQTNPAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSSHHED 199

Query: 186 AAAASGSGGRSLLRPQMSRHNSTRFSVERS----ESFTDLTEPAREGTRRLSAALAEERS 245
           +    GS  RS  +PQ+SRHNSTR     +    ++  D  + AREGTRRL+  LA+ER 
Sbjct: 200 SPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQ 259

Query: 246 MSAREAVTAQEAADAEATVDEEEQQQEQVAEST--------------PAPVRMSLMDLLE 305
           +SAREAV AQEAA+AEA     E + E  AE++              P   RMSLMDLLE
Sbjct: 260 LSAREAVAAQEAAEAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE 319

Query: 306 ETDRQMGFEGSTYRI-----EDEDEEEEIENEVSTTVCGGG---NSGGTEPHCCVCMVRH 356
           ETDRQMG EGS Y +     E+E+EEEE E E      G     N+GG E +CCVCMVRH
Sbjct: 320 ETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRH 379

The following BLAST results are available for this feature:
BLAST of CSPI07G14350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G14350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6R9_CUCSA7.2e-19199.44Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1[more]
W9SC41_9ROSA1.4e-7750.63Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1[more]
V4T971_9ROSI7.7e-6847.38Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1[more]
A0A067FRX5_CITSI5.2e-6447.06Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1[more]
A0A0D2QUT8_GOSRA6.8e-5645.58Uncharacterized protein OS=Gossypium raimondii GN=B456_001G233400 PE=4 SV=1[more]
BLAST of CSPI07G14350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07120.19.4e-4136.70 RING/U-box superfamily protein[more]
AT3G25030.11.7e-2635.79 RING/U-box superfamily protein[more]
AT4G13100.28.5e-2650.00 RING/U-box superfamily protein[more]
AT4G22250.13.6e-2452.73 RING/U-box superfamily protein[more]
AT4G03965.17.5e-2244.90 RING/U-box superfamily protein[more]
BLAST of CSPI07G14350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778726974|ref|XP_011659191.1|1.0e-19099.44PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus][more]
gi|659116324|ref|XP_008458019.1|1.2e-17089.97PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo][more]
gi|703151216|ref|XP_010110062.1|2.0e-7750.63hypothetical protein L484_003042 [Morus notabilis][more]
gi|1009149507|ref|XP_015892515.1|1.1e-7249.26PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba][more]
gi|567902210|ref|XP_006443593.1|1.1e-6747.38hypothetical protein CICLE_v10020442mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G14350.1CSPI07G14350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 307..344
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 307..345
score: 10
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 303..346
score: 1.
NoneNo IPR availableunknownCoilCoilcoord: 228..248
scor
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 253..355
score: 1.5E-29coord: 101..179
score: 1.5
NoneNo IPR availablePANTHERPTHR12183:SF11C3HC4 TYPE RING-FINGER PROTEIN-RELATEDcoord: 101..179
score: 1.5E-29coord: 253..355
score: 1.5
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 305..348
score: 2.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 280..351
score: 1.41